SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 4442 4443 4444 4445 4446 4447 4448 4449 4450 4451 4452 4453 4454 4455 4456 4457 4458 4459 4460 4461 4462 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    890201 8ua7:G (3.3) BS01 dna N/A GO:0003677 ... A0A3T1CXA3 39443461
    890202 8ua7:G (3.3) BS02 dna N/A GO:0003677 ... A0A3T1CXA3 39443461
    890203 8ua7:H (3.3) BS01 dna N/A GO:0046982 ... A0A3T1CWJ9 39443461
    890204 8ua8:R (3.7) BS01 CA N/A N/A P98155 39095394
    890205 8uaa:A (3.4) BS01 peptide N/A GO:0000837 ... P25694 39209885
    890206 8uaa:A (3.4) BS02 08T N/A GO:0000837 ... P25694 39209885
    890207 8uaa:A (3.4) BS03 08T N/A GO:0000837 ... P25694 39209885
    890208 8uaa:B (3.4) BS01 peptide N/A GO:0000837 ... P25694 39209885
    890209 8uaa:B (3.4) BS02 08T N/A GO:0000837 ... P25694 39209885
    890210 8uaa:B (3.4) BS03 08T N/A GO:0000837 ... P25694 39209885
    890211 8uaa:B (3.4) BS04 08T N/A GO:0000837 ... P25694 39209885
    890212 8uaa:C (3.4) BS01 peptide N/A GO:0000837 ... P25694 39209885
    890213 8uaa:C (3.4) BS02 08T N/A GO:0000837 ... P25694 39209885
    890214 8uaa:C (3.4) BS03 08T N/A GO:0000837 ... P25694 39209885
    890215 8uaa:C (3.4) BS04 08T N/A GO:0000837 ... P25694 39209885
    890216 8uaa:C (3.4) BS05 08T N/A GO:0000837 ... P25694 39209885
    890217 8uaa:D (3.4) BS01 peptide N/A GO:0000837 ... P25694 39209885
    890218 8uaa:D (3.4) BS02 08T N/A GO:0000837 ... P25694 39209885
    890219 8uaa:D (3.4) BS03 08T N/A GO:0000837 ... P25694 39209885
    890220 8uaa:E (3.4) BS01 peptide N/A GO:0000837 ... P25694 39209885
    890221 8uaa:E (3.4) BS02 ADP N/A GO:0000837 ... P25694 39209885
    890222 8uaa:E (3.4) BS03 ADP N/A GO:0000837 ... P25694 39209885
    890223 8uab:A (1.781) BS01 W28 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 38181791
    890224 8uac:A (1.4) BS01 W28 3.4.22.15 GO:0006508 ... P07711 38181791
    890225 8uac:B (1.4) BS01 W28 3.4.22.15 GO:0006508 ... P07711 38181791
    890226 8uae:A (3.25) BS01 AR6 N/A N/A N/A 38096827
    890227 8uae:B (3.25) BS01 AR6 N/A N/A N/A 38096827
    890228 8uae:C (3.25) BS01 AR6 N/A N/A N/A 38096827
    890229 8uae:D (3.25) BS01 AR6 N/A N/A N/A 38096827
    890230 8uae:E (3.25) BS01 AR6 N/A N/A N/A 38096827
    890231 8uae:F (3.25) BS01 AR6 N/A N/A N/A 38096827
    890232 8uae:G (3.25) BS01 AR6 N/A N/A N/A 38096827
    890233 8uae:H (3.25) BS01 AR6 N/A N/A N/A 38096827
    890234 8uae:I (3.25) BS01 AR6 N/A N/A N/A 38096827
    890235 8uae:J (3.25) BS01 AR6 N/A N/A N/A 38096827
    890236 8uae:K (3.25) BS01 AR6 N/A N/A N/A 38096827
    890237 8uae:L (3.25) BS01 AR6 N/A N/A N/A 38096827
    890238 8uae:M (3.25) BS01 AGS N/A N/A N/A 38096827
    890239 8uae:M (3.25) BS02 MG N/A N/A N/A 38096827
    890240 8uae:N (3.25) BS01 AGS N/A N/A N/A 38096827
    890241 8uae:N (3.25) BS02 MG N/A N/A N/A 38096827
    890242 8uae:O (3.25) BS01 AGS N/A N/A N/A 38096827
    890243 8uae:P (3.25) BS01 AGS N/A N/A N/A 38096827
    890244 8uae:Q (3.25) BS01 AGS N/A N/A N/A 38096827
    890245 8uaf:A (3.18) BS01 AR6 N/A N/A N/A 38096827
    890246 8uaf:B (3.18) BS01 NAD N/A N/A N/A 38096827
    890247 8uaf:C (3.18) BS01 NAD N/A N/A N/A 38096827
    890248 8uaf:D (3.18) BS01 AR6 N/A N/A N/A 38096827
    890249 8uaf:E (3.18) BS01 NAD N/A N/A N/A 38096827
    890250 8uaf:F (3.18) BS01 NAD N/A N/A N/A 38096827
    890251 8uaf:G (3.18) BS01 NAD N/A N/A N/A 38096827
    890252 8uaf:H (3.18) BS01 NAD N/A N/A N/A 38096827
    890253 8uaf:I (3.18) BS01 AR6 N/A N/A N/A 38096827
    890254 8uaf:J (3.18) BS01 NAD N/A N/A N/A 38096827
    890255 8uaf:K (3.18) BS01 AR6 N/A N/A N/A 38096827
    890256 8uaf:L (3.18) BS01 NAD N/A N/A N/A 38096827
    890257 8uaf:M (3.18) BS01 ADP N/A N/A N/A 38096827
    890258 8uaf:M (3.18) BS02 MG N/A N/A N/A 38096827
    890259 8uaf:N (3.18) BS01 ADP N/A N/A N/A 38096827
    890260 8uaf:O (3.18) BS01 ADP N/A N/A N/A 38096827
    890261 8uaf:P (3.18) BS01 MG N/A N/A N/A 38096827
    890262 8uaf:P (3.18) BS02 ADP N/A N/A N/A 38096827
    890263 8uaf:Q (3.18) BS01 ADP N/A N/A N/A 38096827
    890264 8uag:A (2.29) BS01 MG N/A GO:0016757 ... Q4QES5 N/A
    890265 8uag:A (2.29) BS02 UPG N/A GO:0016757 ... Q4QES5 N/A
    890266 8uaj:A (2.14) BS01 FMN N/A GO:0003959 ... E8PRF1 N/A
    890267 8uaj:B (2.14) BS01 FMN N/A GO:0003959 ... E8PRF1 N/A
    890268 8uaj:C (2.14) BS01 FMN N/A GO:0003959 ... E8PRF1 N/A
    890269 8uaj:D (2.14) BS01 FMN N/A GO:0003959 ... E8PRF1 N/A
    890270 8uak:A (2.82) BS01 W39 2.7.11.13 GO:0004672 ... P17252 38198520
    890271 8uan:A (1.99) BS01 CO N/A GO:0005506 ... Q96SZ5 38941563
    890272 8uap:A (2.5) BS01 W2T 2.7.11.16 GO:0004672 ... P34947 38016297
    890273 8uaq:A (2.8) BS01 W3F 2.7.11.16 GO:0004672 ... P34947 38016297
    890274 8uar:A (2.99) BS01 ZN N/A GO:0004022 ... A0AAT8XUI2 N/A
    890275 8uar:A (2.99) BS02 ZN N/A GO:0004022 ... A0AAT8XUI2 N/A
    890276 8uar:A (2.99) BS03 W46 N/A GO:0004022 ... A0AAT8XUI2 N/A
    890277 8uar:B (2.99) BS01 ZN N/A GO:0004022 ... A0AAT8XUI2 N/A
    890278 8uar:B (2.99) BS02 ZN N/A GO:0004022 ... A0AAT8XUI2 N/A
    890279 8uar:B (2.99) BS03 W46 N/A GO:0004022 ... A0AAT8XUI2 N/A
    890280 8uar:C (2.99) BS01 ZN N/A GO:0004022 ... A0AAT8XUI2 N/A
    890281 8uar:C (2.99) BS02 ZN N/A GO:0004022 ... A0AAT8XUI2 N/A
    890282 8uar:C (2.99) BS03 W46 N/A GO:0004022 ... A0AAT8XUI2 N/A
    890283 8uar:D (2.99) BS01 ZN N/A GO:0004022 ... A0AAT8XUI2 N/A
    890284 8uar:D (2.99) BS02 ZN N/A GO:0004022 ... A0AAT8XUI2 N/A
    890285 8uar:D (2.99) BS03 W46 N/A GO:0004022 ... A0AAT8XUI2 N/A
    890286 8uar:E (2.99) BS01 ZN N/A GO:0004022 ... A0AAT8XUI2 N/A
    890287 8uar:E (2.99) BS02 ZN N/A GO:0004022 ... A0AAT8XUI2 N/A
    890288 8uar:E (2.99) BS03 W46 N/A GO:0004022 ... A0AAT8XUI2 N/A
    890289 8uar:F (2.99) BS01 ZN N/A GO:0004022 ... A0AAT8XUI2 N/A
    890290 8uar:F (2.99) BS02 ZN N/A GO:0004022 ... A0AAT8XUI2 N/A
    890291 8uar:F (2.99) BS03 W46 N/A GO:0004022 ... A0AAT8XUI2 N/A
    890292 8uar:G (2.99) BS01 ZN N/A GO:0004022 ... A0AAT8XUI2 N/A
    890293 8uar:G (2.99) BS02 ZN N/A GO:0004022 ... A0AAT8XUI2 N/A
    890294 8uar:H (2.99) BS01 ZN N/A GO:0004022 ... A0AAT8XUI2 N/A
    890295 8uar:H (2.99) BS02 ZN N/A GO:0004022 ... A0AAT8XUI2 N/A
    890296 8uar:H (2.99) BS03 W46 N/A GO:0004022 ... A0AAT8XUI2 N/A
    890297 8uar:I (2.99) BS01 ZN N/A GO:0004022 ... A0AAT8XUI2 N/A
    890298 8uar:I (2.99) BS02 ZN N/A GO:0004022 ... A0AAT8XUI2 N/A
    890299 8uar:I (2.99) BS03 W46 N/A GO:0004022 ... A0AAT8XUI2 N/A
    890300 8uar:J (2.99) BS01 ZN N/A GO:0004022 ... A0AAT8XUI2 N/A
    890301 8uar:J (2.99) BS02 ZN N/A GO:0004022 ... A0AAT8XUI2 N/A
    890302 8uar:J (2.99) BS03 W46 N/A GO:0004022 ... A0AAT8XUI2 N/A
    890303 8uar:K (2.99) BS01 ZN N/A GO:0004022 ... A0AAT8XUI2 N/A
    890304 8uar:K (2.99) BS02 ZN N/A GO:0004022 ... A0AAT8XUI2 N/A
    890305 8uar:K (2.99) BS03 W46 N/A GO:0004022 ... A0AAT8XUI2 N/A
    890306 8uar:L (2.99) BS01 ZN N/A GO:0004022 ... A0AAT8XUI2 N/A
    890307 8uar:L (2.99) BS02 ZN N/A GO:0004022 ... A0AAT8XUI2 N/A
    890308 8uar:L (2.99) BS03 W46 N/A GO:0004022 ... A0AAT8XUI2 N/A
    890309 8uas:A (2.2) BS01 ZN N/A GO:0004022 ... A0AAT8XUI2 N/A
    890310 8uas:A (2.2) BS02 ZN N/A GO:0004022 ... A0AAT8XUI2 N/A
    890311 8uas:B (2.2) BS01 ZN N/A GO:0004022 ... A0AAT8XUI2 N/A
    890312 8uas:B (2.2) BS02 ZN N/A GO:0004022 ... A0AAT8XUI2 N/A
    890313 8uas:C (2.2) BS01 ZN N/A GO:0004022 ... A0AAT8XUI2 N/A
    890314 8uas:C (2.2) BS02 ZN N/A GO:0004022 ... A0AAT8XUI2 N/A
    890315 8uas:C (2.2) BS03 W3O N/A GO:0004022 ... A0AAT8XUI2 N/A
    890316 8uas:D (2.2) BS01 ZN N/A GO:0004022 ... A0AAT8XUI2 N/A
    890317 8uas:D (2.2) BS02 ZN N/A GO:0004022 ... A0AAT8XUI2 N/A
    890318 8uas:D (2.2) BS03 W3O N/A GO:0004022 ... A0AAT8XUI2 N/A
    890319 8uas:E (2.2) BS01 ZN N/A GO:0004022 ... A0AAT8XUI2 N/A
    890320 8uas:E (2.2) BS02 ZN N/A GO:0004022 ... A0AAT8XUI2 N/A
    890321 8uas:E (2.2) BS03 W3O N/A GO:0004022 ... A0AAT8XUI2 N/A
    890322 8uas:F (2.2) BS01 ZN N/A GO:0004022 ... A0AAT8XUI2 N/A
    890323 8uas:F (2.2) BS02 ZN N/A GO:0004022 ... A0AAT8XUI2 N/A
    890324 8uas:F (2.2) BS03 W3O N/A GO:0004022 ... A0AAT8XUI2 N/A
    890325 8uas:G (2.2) BS01 ZN N/A GO:0004022 ... A0AAT8XUI2 N/A
    890326 8uas:G (2.2) BS02 ZN N/A GO:0004022 ... A0AAT8XUI2 N/A
    890327 8uas:G (2.2) BS03 W3O N/A GO:0004022 ... A0AAT8XUI2 N/A
    890328 8uas:H (2.2) BS01 ZN N/A GO:0004022 ... A0AAT8XUI2 N/A
    890329 8uas:H (2.2) BS02 ZN N/A GO:0004022 ... A0AAT8XUI2 N/A
    890330 8uas:H (2.2) BS03 W3O N/A GO:0004022 ... A0AAT8XUI2 N/A
    890331 8uas:I (2.2) BS01 ZN N/A GO:0004022 ... A0AAT8XUI2 N/A
    890332 8uas:I (2.2) BS02 ZN N/A GO:0004022 ... A0AAT8XUI2 N/A
    890333 8uas:I (2.2) BS03 W3O N/A GO:0004022 ... A0AAT8XUI2 N/A
    890334 8uas:J (2.2) BS01 ZN N/A GO:0004022 ... A0AAT8XUI2 N/A
    890335 8uas:J (2.2) BS02 ZN N/A GO:0004022 ... A0AAT8XUI2 N/A
    890336 8uas:J (2.2) BS03 W3O N/A GO:0004022 ... A0AAT8XUI2 N/A
    890337 8uas:K (2.2) BS01 ZN N/A GO:0004022 ... A0AAT8XUI2 N/A
    890338 8uas:K (2.2) BS02 ZN N/A GO:0004022 ... A0AAT8XUI2 N/A
    890339 8uas:K (2.2) BS03 W3O N/A GO:0004022 ... A0AAT8XUI2 N/A
    890340 8uas:L (2.2) BS01 W3O N/A GO:0004022 ... A0AAT8XUI2 N/A
    890341 8uas:L (2.2) BS02 ZN N/A GO:0004022 ... A0AAT8XUI2 N/A
    890342 8uas:L (2.2) BS03 ZN N/A GO:0004022 ... A0AAT8XUI2 N/A
    890343 8uat:A (2.76) BS01 FMN N/A GO:0003959 ... E8PRF1 N/A
    890344 8uat:A (2.76) BS02 W3X N/A GO:0003959 ... E8PRF1 N/A
    890345 8uat:B (2.76) BS01 FMN N/A GO:0003959 ... E8PRF1 N/A
    890346 8uat:B (2.76) BS02 W3X N/A GO:0003959 ... E8PRF1 N/A
    890347 8uat:C (2.76) BS01 FMN N/A GO:0003959 ... E8PRF1 N/A
    890348 8uat:D (2.76) BS01 FMN N/A GO:0003959 ... E8PRF1 N/A
    890349 8uat:E (2.76) BS01 FMN N/A GO:0003959 ... E8PRF1 N/A
    890350 8uat:E (2.76) BS02 W3X N/A GO:0003959 ... E8PRF1 N/A
    890351 8uat:F (2.76) BS01 FMN N/A GO:0003959 ... E8PRF1 N/A
    890352 8uat:F (2.76) BS02 W3X N/A GO:0003959 ... E8PRF1 N/A
    890353 8uat:G (2.76) BS01 FMN N/A GO:0003959 ... E8PRF1 N/A
    890354 8uat:H (2.76) BS01 FMN N/A GO:0003959 ... E8PRF1 N/A
    890355 8uau:A (5.7) BS01 peptide N/A GO:0004057 ... O95260 39068213
    890356 8uau:A (5.7) BS02 rna N/A GO:0004057 ... O95260 39068213
    890357 8uax:B (1.9) BS01 WFH N/A GO:0003676 ... P61823 38300702
    890358 8uay:A (1.8) BS01 WF9 N/A GO:0003676 ... P61823 38300702
    890359 8uaz:A (1.76) BS01 WFU N/A GO:0003676 ... P61823 38300702
    890360 8uaz:B (1.76) BS01 WFU N/A GO:0003676 ... P61823 38300702
    890361 8ub0:A (2.0) BS01 AMP N/A GO:0003676 ... P61823 38300702
    890362 8ub0:B (2.0) BS01 A1BA4 N/A GO:0003676 ... P61823 38300702
    890363 8ub1:B (1.53) BS01 WFL N/A GO:0003676 ... P61823 38300702
    890364 8ub2:A (1.6) BS01 AMP N/A GO:0003676 ... P61823 38300702
    890365 8ub4:A (2.9) BS01 peptide N/A GO:0000837 ... P25694 39209885
    890366 8ub4:A (2.9) BS02 08T N/A GO:0000837 ... P25694 39209885
    890367 8ub4:A (2.9) BS03 08T N/A GO:0000837 ... P25694 39209885
    890368 8ub4:B (2.9) BS01 peptide N/A GO:0000837 ... P25694 39209885
    890369 8ub4:B (2.9) BS02 peptide N/A GO:0000837 ... P25694 39209885
    890370 8ub4:B (2.9) BS03 08T N/A GO:0000837 ... P25694 39209885
    890371 8ub4:B (2.9) BS04 08T N/A GO:0000837 ... P25694 39209885
    890372 8ub4:B (2.9) BS05 08T N/A GO:0000837 ... P25694 39209885
    890373 8ub4:C (2.9) BS01 peptide N/A GO:0000837 ... P25694 39209885
    890374 8ub4:C (2.9) BS02 peptide N/A GO:0000837 ... P25694 39209885
    890375 8ub4:C (2.9) BS03 08T N/A GO:0000837 ... P25694 39209885
    890376 8ub4:C (2.9) BS04 08T N/A GO:0000837 ... P25694 39209885
    890377 8ub4:C (2.9) BS05 08T N/A GO:0000837 ... P25694 39209885
    890378 8ub4:C (2.9) BS06 08T N/A GO:0000837 ... P25694 39209885
    890379 8ub4:D (2.9) BS01 peptide N/A GO:0000837 ... P25694 39209885
    890380 8ub4:D (2.9) BS02 peptide N/A GO:0000837 ... P25694 39209885
    890381 8ub4:D (2.9) BS03 08T N/A GO:0000837 ... P25694 39209885
    890382 8ub4:D (2.9) BS04 08T N/A GO:0000837 ... P25694 39209885
    890383 8ub4:D (2.9) BS05 08T N/A GO:0000837 ... P25694 39209885
    890384 8ub4:E (2.9) BS01 peptide N/A GO:0000837 ... P25694 39209885
    890385 8ub4:E (2.9) BS02 08T N/A GO:0000837 ... P25694 39209885
    890386 8ub4:E (2.9) BS03 08T N/A GO:0000837 ... P25694 39209885
    890387 8ub4:E (2.9) BS04 ADP N/A GO:0000837 ... P25694 39209885
    890388 8ub4:E (2.9) BS05 ADP N/A GO:0000837 ... P25694 39209885
    890389 8ub7:A (3.2) BS01 rna N/A GO:0003964 ... Q775D8 39779855
    890390 8ub7:A (3.2) BS02 rna N/A GO:0003964 ... Q775D8 39779855
    890391 8ub7:A (3.2) BS03 rna N/A GO:0003964 ... Q775D8 39779855
    890392 8ub7:A (3.2) BS04 DCP N/A GO:0003964 ... Q775D8 39779855
    890393 8ub7:A (3.2) BS05 MG N/A GO:0003964 ... Q775D8 39779855
    890394 8ub7:B (3.2) BS01 rna N/A GO:0005737 ... Q775D7
    Q9FA38
    39779855
    890395 8ub7:B (3.2) BS02 rna N/A GO:0005737 ... Q775D7
    Q9FA38
    39779855
    890396 8ub7:C (3.2) BS01 rna N/A GO:0005737 ... Q775D7
    Q9FA38
    39779855
    890397 8ub7:D (3.2) BS01 rna N/A GO:0005737 ... Q775D7
    Q9FA38
    39779855
    890398 8ub7:E (3.2) BS01 rna N/A GO:0005737 ... Q775D7
    Q9FA38
    39779855
    890399 8ub7:F (3.2) BS01 rna N/A GO:0005737 ... Q775D7
    Q9FA38
    39779855
    890400 8ub8:A (3.28) BS01 rna N/A GO:0003964 ... Q775D8 39779855

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).