SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    890801 8ud6:1N (2.7) BS02 MG ? GO:0003729 ... P60488 38359125
    890802 8ud6:1O (2.7) BS01 rna ? GO:0003735 ... Q5SHP8 38359125
    890803 8ud6:1O (2.7) BS02 rna ? GO:0003735 ... Q5SHP8 38359125
    890804 8ud6:1O (2.7) BS03 MG ? GO:0003735 ... Q5SHP8 38359125
    890805 8ud6:1O (2.7) BS04 MG ? GO:0003735 ... Q5SHP8 38359125
    890806 8ud6:1P (2.7) BS01 rna ? GO:0003735 ... Q5SHQ7 38359125
    890807 8ud6:1P (2.7) BS02 MG ? GO:0003735 ... Q5SHQ7 38359125
    890808 8ud6:1P (2.7) BS03 MG ? GO:0003735 ... Q5SHQ7 38359125
    890809 8ud6:1P (2.7) BS04 MG ? GO:0003735 ... Q5SHQ7 38359125
    890810 8ud6:1P (2.7) BS05 MG ? GO:0003735 ... Q5SHQ7 38359125
    890811 8ud6:1P (2.7) BS06 MG ? GO:0003735 ... Q5SHQ7 38359125
    890812 8ud6:1Q (2.7) BS01 rna ? GO:0003735 ... P60489 38359125
    890813 8ud6:1Q (2.7) BS02 rna ? GO:0003735 ... P60489 38359125
    890814 8ud6:1Q (2.7) BS03 rna ? GO:0003735 ... P60489 38359125
    890815 8ud6:1Q (2.7) BS04 MG ? GO:0003735 ... P60489 38359125
    890816 8ud6:1Q (2.7) BS05 MG ? GO:0003735 ... P60489 38359125
    890817 8ud6:1Q (2.7) BS06 MG ? GO:0003735 ... P60489 38359125
    890818 8ud6:1Q (2.7) BS07 MG ? GO:0003735 ... P60489 38359125
    890819 8ud6:1R (2.7) BS01 rna ? GO:0003735 ... Q9Z9H5 38359125
    890820 8ud6:1R (2.7) BS02 MG ? GO:0003735 ... Q9Z9H5 38359125
    890821 8ud6:1R (2.7) BS03 MG ? GO:0003735 ... Q9Z9H5 38359125
    890822 8ud6:1S (2.7) BS01 rna ? GO:0003735 ... Q5SHQ4 38359125
    890823 8ud6:1S (2.7) BS02 rna ? GO:0003735 ... Q5SHQ4 38359125
    890824 8ud6:1S (2.7) BS03 MG ? GO:0003735 ... Q5SHQ4 38359125
    890825 8ud6:1T (2.7) BS01 rna ? GO:0003735 ... P60490 38359125
    890826 8ud6:1T (2.7) BS02 rna ? GO:0003735 ... P60490 38359125
    890827 8ud6:1T (2.7) BS03 MG ? GO:0003735 ... P60490 38359125
    890828 8ud6:1U (2.7) BS01 rna ? GO:0000027 ... P60491 38359125
    890829 8ud6:1U (2.7) BS02 MG ? GO:0000027 ... P60491 38359125
    890830 8ud6:1U (2.7) BS03 MG ? GO:0000027 ... P60491 38359125
    890831 8ud6:1U (2.7) BS04 MG ? GO:0000027 ... P60491 38359125
    890832 8ud6:1U (2.7) BS05 MG ? GO:0000027 ... P60491 38359125
    890833 8ud6:1U (2.7) BS06 MG ? GO:0000027 ... P60491 38359125
    890834 8ud6:1U (2.7) BS07 MG ? GO:0000027 ... P60491 38359125
    890835 8ud6:1U (2.7) BS08 MG ? GO:0000027 ... P60491 38359125
    890836 8ud6:1U (2.7) BS09 MG ? GO:0000027 ... P60491 38359125
    890837 8ud6:1U (2.7) BS10 MG ? GO:0000027 ... P60491 38359125
    890838 8ud6:1V (2.7) BS01 rna ? GO:0003723 ... P60492 38359125
    890839 8ud6:1V (2.7) BS02 MG ? GO:0003723 ... P60492 38359125
    890840 8ud6:1V (2.7) BS03 MG ? GO:0003723 ... P60492 38359125
    890841 8ud6:1V (2.7) BS04 MG ? GO:0003723 ... P60492 38359125
    890842 8ud6:1V (2.7) BS05 MG ? GO:0003723 ... P60492 38359125
    890843 8ud6:1V (2.7) BS06 MG ? GO:0003723 ... P60492 38359125
    890844 8ud6:1V (2.7) BS07 MG ? GO:0003723 ... P60492 38359125
    890845 8ud6:1W (2.7) BS01 rna ? GO:0003735 ... Q5SHP3 38359125
    890846 8ud6:1W (2.7) BS02 MG ? GO:0003735 ... Q5SHP3 38359125
    890847 8ud6:1W (2.7) BS03 MG ? GO:0003735 ... Q5SHP3 38359125
    890848 8ud6:1W (2.7) BS04 MG ? GO:0003735 ... Q5SHP3 38359125
    890849 8ud6:1W (2.7) BS05 MG ? GO:0003735 ... Q5SHP3 38359125
    890850 8ud6:1X (2.7) BS01 rna ? GO:0003735 ... Q5SHP0 38359125
    890851 8ud6:1X (2.7) BS02 MG ? GO:0003735 ... Q5SHP0 38359125
    890852 8ud6:1X (2.7) BS03 MG ? GO:0003735 ... Q5SHP0 38359125
    890853 8ud6:1X (2.7) BS04 MG ? GO:0003735 ... Q5SHP0 38359125
    890854 8ud6:1X (2.7) BS05 MG ? GO:0003735 ... Q5SHP0 38359125
    890855 8ud6:1X (2.7) BS06 MG ? GO:0003735 ... Q5SHP0 38359125
    890856 8ud6:1Y (2.7) BS01 rna ? GO:0003723 ... Q5SHP9 38359125
    890857 8ud6:1Y (2.7) BS02 MG ? GO:0003723 ... Q5SHP9 38359125
    890858 8ud6:1Y (2.7) BS03 ZN ? GO:0003723 ... Q5SHP9 38359125
    890859 8ud6:1Z (2.7) BS01 rna ? GO:0003723 ... Q5SHZ1 38359125
    890860 8ud6:1Z (2.7) BS02 rna ? GO:0003723 ... Q5SHZ1 38359125
    890861 8ud6:1b (2.7) BS01 rna ? GO:0003735 ... P80371 38359125
    890862 8ud6:1c (2.7) BS01 rna ? GO:0003676 ... P80372 38359125
    890863 8ud6:1d (2.7) BS01 rna ? GO:0003723 ... P80373 38359125
    890864 8ud6:1d (2.7) BS02 SF4 ? GO:0003723 ... P80373 38359125
    890865 8ud6:1e (2.7) BS01 rna ? GO:0003723 ... Q5SHQ5 38359125
    890866 8ud6:1e (2.7) BS02 MG ? GO:0003723 ... Q5SHQ5 38359125
    890867 8ud6:1e (2.7) BS03 MG ? GO:0003723 ... Q5SHQ5 38359125
    890868 8ud6:1f (2.7) BS01 rna ? GO:0003735 ... Q5SLP8 38359125
    890869 8ud6:1g (2.7) BS01 rna ? GO:0000049 ... P17291 38359125
    890870 8ud6:1g (2.7) BS02 rna ? GO:0000049 ... P17291 38359125
    890871 8ud6:1h (2.7) BS01 rna ? GO:0003735 ... P0DOY9 38359125
    890872 8ud6:1i (2.7) BS01 rna ? GO:0003723 ... P80374 38359125
    890873 8ud6:1i (2.7) BS02 rna ? GO:0003723 ... P80374 38359125
    890874 8ud6:1j (2.7) BS01 rna ? GO:0000049 ... Q5SHN7 38359125
    890875 8ud6:1k (2.7) BS01 rna ? GO:0003735 ... P80376 38359125
    890876 8ud6:1k (2.7) BS02 MG ? GO:0003735 ... P80376 38359125
    890877 8ud6:1l (2.7) BS01 rna ? GO:0000049 ... Q5SHN3 38359125
    890878 8ud6:1l (2.7) BS02 MG ? GO:0000049 ... Q5SHN3 38359125
    890879 8ud6:1m (2.7) BS01 rna ? GO:0000049 ... P80377 38359125
    890880 8ud6:1m (2.7) BS02 rna ? GO:0000049 ... P80377 38359125
    890881 8ud6:1m (2.7) BS03 rna ? GO:0000049 ... P80377 38359125
    890882 8ud6:1m (2.7) BS04 MG ? GO:0000049 ... P80377 38359125
    890883 8ud6:1n (2.7) BS01 rna ? GO:0003735 ... P0DOY6 38359125
    890884 8ud6:1n (2.7) BS02 ZN ? GO:0003735 ... P0DOY6 38359125
    890885 8ud6:1o (2.7) BS01 rna ? GO:0003735 ... Q5SJ76 38359125
    890886 8ud6:1o (2.7) BS02 rna ? GO:0003735 ... Q5SJ76 38359125
    890887 8ud6:1p (2.7) BS01 rna ? GO:0003735 ... Q5SJH3 38359125
    890888 8ud6:1q (2.7) BS01 rna ? GO:0003735 ... P0DOY7 38359125
    890889 8ud6:1r (2.7) BS01 rna ? GO:0003735 ... Q5SLQ0 38359125
    890890 8ud6:1s (2.7) BS01 rna ? GO:0000028 ... Q5SHP2 38359125
    890891 8ud6:1t (2.7) BS01 rna ? GO:0003723 ... P80380 38359125
    890892 8ud6:1t (2.7) BS02 MG ? GO:0003723 ... P80380 38359125
    890893 8ud6:20 (2.7) BS01 rna ? GO:0003735 ... P60493 38359125
    890894 8ud6:20 (2.7) BS02 rna ? GO:0003735 ... P60493 38359125
    890895 8ud6:20 (2.7) BS03 rna ? GO:0003735 ... P60493 38359125
    890896 8ud6:21 (2.7) BS01 rna ? GO:0003735 ... P60494 38359125
    890897 8ud6:21 (2.7) BS02 MG ? GO:0003735 ... P60494 38359125
    890898 8ud6:22 (2.7) BS01 rna ? GO:0003735 ... Q5SHP6 38359125
    890899 8ud6:23 (2.7) BS01 rna ? GO:0003735 ... Q5SHQ6 38359125
    890900 8ud6:23 (2.7) BS02 rna ? GO:0003735 ... Q5SHQ6 38359125
    890901 8ud6:23 (2.7) BS03 MG ? GO:0003735 ... Q5SHQ6 38359125
    890902 8ud6:24 (2.7) BS01 rna ? GO:0003735 ... Q5SJE1 38359125
    890903 8ud6:24 (2.7) BS02 ZN ? GO:0003735 ... Q5SJE1 38359125
    890904 8ud6:25 (2.7) BS01 rna ? GO:0003735 ... P80339 38359125
    890905 8ud6:25 (2.7) BS02 ZN ? GO:0003735 ... P80339 38359125
    890906 8ud6:26 (2.7) BS01 rna ? GO:0003735 ... P35871 38359125
    890907 8ud6:26 (2.7) BS02 ZN ? GO:0003735 ... P35871 38359125
    890908 8ud6:27 (2.7) BS01 rna ? GO:0003735 ... P80340 38359125
    890909 8ud6:27 (2.7) BS02 MG ? GO:0003735 ... P80340 38359125
    890910 8ud6:28 (2.7) BS01 rna ? GO:0003735 ... Q5SKU1 38359125
    890911 8ud6:29 (2.7) BS01 rna ? GO:0003735 ... Q5SHR2 38359125
    890912 8ud6:29 (2.7) BS02 ZN ? GO:0003735 ... Q5SHR2 38359125
    890913 8ud6:2D (2.7) BS01 rna ? GO:0002181 ... P60405 38359125
    890914 8ud6:2D (2.7) BS02 rna ? GO:0002181 ... P60405 38359125
    890915 8ud6:2D (2.7) BS03 MG ? GO:0002181 ... P60405 38359125
    890916 8ud6:2D (2.7) BS04 MG ? GO:0002181 ... P60405 38359125
    890917 8ud6:2D (2.7) BS05 MG ? GO:0002181 ... P60405 38359125
    890918 8ud6:2D (2.7) BS06 MG ? GO:0002181 ... P60405 38359125
    890919 8ud6:2E (2.7) BS01 rna ? GO:0003735 ... Q5SHN8 38359125
    890920 8ud6:2F (2.7) BS01 rna ? GO:0003735 ... Q5SHN9 38359125
    890921 8ud6:2F (2.7) BS02 MG ? GO:0003735 ... Q5SHN9 38359125
    890922 8ud6:2F (2.7) BS03 MG ? GO:0003735 ... Q5SHN9 38359125
    890923 8ud6:2F (2.7) BS04 MG ? GO:0003735 ... Q5SHN9 38359125
    890924 8ud6:2G (2.7) BS01 rna ? GO:0000049 ... Q5SHQ0 38359125
    890925 8ud6:2G (2.7) BS02 rna ? GO:0000049 ... Q5SHQ0 38359125
    890926 8ud6:2G (2.7) BS03 rna ? GO:0000049 ... Q5SHQ0 38359125
    890927 8ud6:2H (2.7) BS01 rna ? GO:0002181 ... P0DOY8 38359125
    890928 8ud6:2I (2.7) BS01 rna ? GO:0003735 ... Q5SLQ1 38359125
    890929 8ud6:2N (2.7) BS01 rna ? GO:0003729 ... P60488 38359125
    890930 8ud6:2O (2.7) BS01 rna ? GO:0003735 ... Q5SHP8 38359125
    890931 8ud6:2O (2.7) BS02 rna ? GO:0003735 ... Q5SHP8 38359125
    890932 8ud6:2P (2.7) BS01 rna ? GO:0003735 ... Q5SHQ7 38359125
    890933 8ud6:2Q (2.7) BS01 rna ? GO:0003735 ... P60489 38359125
    890934 8ud6:2Q (2.7) BS02 rna ? GO:0003735 ... P60489 38359125
    890935 8ud6:2Q (2.7) BS03 MG ? GO:0003735 ... P60489 38359125
    890936 8ud6:2Q (2.7) BS04 MG ? GO:0003735 ... P60489 38359125
    890937 8ud6:2Q (2.7) BS05 MG ? GO:0003735 ... P60489 38359125
    890938 8ud6:2R (2.7) BS01 rna ? GO:0003735 ... Q9Z9H5 38359125
    890939 8ud6:2S (2.7) BS01 rna ? GO:0003735 ... Q5SHQ4 38359125
    890940 8ud6:2S (2.7) BS02 rna ? GO:0003735 ... Q5SHQ4 38359125
    890941 8ud6:2T (2.7) BS01 rna ? GO:0003735 ... P60490 38359125
    890942 8ud6:2T (2.7) BS02 rna ? GO:0003735 ... P60490 38359125
    890943 8ud6:2U (2.7) BS01 rna ? GO:0000027 ... P60491 38359125
    890944 8ud6:2U (2.7) BS02 MG ? GO:0000027 ... P60491 38359125
    890945 8ud6:2V (2.7) BS01 rna ? GO:0003723 ... P60492 38359125
    890946 8ud6:2V (2.7) BS02 MG ? GO:0003723 ... P60492 38359125
    890947 8ud6:2W (2.7) BS01 rna ? GO:0003735 ... Q5SHP3 38359125
    890948 8ud6:2W (2.7) BS02 MG ? GO:0003735 ... Q5SHP3 38359125
    890949 8ud6:2X (2.7) BS01 rna ? GO:0003735 ... Q5SHP0 38359125
    890950 8ud6:2X (2.7) BS02 MG ? GO:0003735 ... Q5SHP0 38359125
    890951 8ud6:2Y (2.7) BS01 rna ? GO:0003723 ... Q5SHP9 38359125
    890952 8ud6:2Y (2.7) BS02 ZN ? GO:0003723 ... Q5SHP9 38359125
    890953 8ud6:2Z (2.7) BS01 rna ? GO:0003723 ... Q5SHZ1 38359125
    890954 8ud6:2Z (2.7) BS02 rna ? GO:0003723 ... Q5SHZ1 38359125
    890955 8ud6:2b (2.7) BS01 rna ? GO:0003735 ... P80371 38359125
    890956 8ud6:2c (2.7) BS01 rna ? GO:0003676 ... P80372 38359125
    890957 8ud6:2d (2.7) BS01 rna ? GO:0003723 ... P80373 38359125
    890958 8ud6:2d (2.7) BS02 MG ? GO:0003723 ... P80373 38359125
    890959 8ud6:2d (2.7) BS03 SF4 ? GO:0003723 ... P80373 38359125
    890960 8ud6:2e (2.7) BS01 rna ? GO:0003723 ... Q5SHQ5 38359125
    890961 8ud6:2e (2.7) BS02 MG ? GO:0003723 ... Q5SHQ5 38359125
    890962 8ud6:2f (2.7) BS01 rna ? GO:0003735 ... Q5SLP8 38359125
    890963 8ud6:2f (2.7) BS02 MG ? GO:0003735 ... Q5SLP8 38359125
    890964 8ud6:2g (2.7) BS01 rna ? GO:0000049 ... P17291 38359125
    890965 8ud6:2g (2.7) BS02 rna ? GO:0000049 ... P17291 38359125
    890966 8ud6:2h (2.7) BS01 rna ? GO:0003735 ... P0DOY9 38359125
    890967 8ud6:2i (2.7) BS01 rna ? GO:0003723 ... P80374 38359125
    890968 8ud6:2i (2.7) BS02 rna ? GO:0003723 ... P80374 38359125
    890969 8ud6:2j (2.7) BS01 rna ? GO:0000049 ... Q5SHN7 38359125
    890970 8ud6:2k (2.7) BS01 rna ? GO:0003735 ... P80376 38359125
    890971 8ud6:2k (2.7) BS02 MG ? GO:0003735 ... P80376 38359125
    890972 8ud6:2l (2.7) BS01 rna ? GO:0000049 ... Q5SHN3 38359125
    890973 8ud6:2l (2.7) BS02 MG ? GO:0000049 ... Q5SHN3 38359125
    890974 8ud6:2l (2.7) BS03 MG ? GO:0000049 ... Q5SHN3 38359125
    890975 8ud6:2l (2.7) BS04 MG ? GO:0000049 ... Q5SHN3 38359125
    890976 8ud6:2m (2.7) BS01 rna ? GO:0000049 ... P80377 38359125
    890977 8ud6:2m (2.7) BS02 rna ? GO:0000049 ... P80377 38359125
    890978 8ud6:2n (2.7) BS01 rna ? GO:0003735 ... P0DOY6 38359125
    890979 8ud6:2n (2.7) BS02 ZN ? GO:0003735 ... P0DOY6 38359125
    890980 8ud6:2o (2.7) BS01 rna ? GO:0003735 ... Q5SJ76 38359125
    890981 8ud6:2o (2.7) BS02 rna ? GO:0003735 ... Q5SJ76 38359125
    890982 8ud6:2p (2.7) BS01 rna ? GO:0003735 ... Q5SJH3 38359125
    890983 8ud6:2q (2.7) BS01 rna ? GO:0003735 ... P0DOY7 38359125
    890984 8ud6:2q (2.7) BS02 MG ? GO:0003735 ... P0DOY7 38359125
    890985 8ud6:2q (2.7) BS03 MG ? GO:0003735 ... P0DOY7 38359125
    890986 8ud6:2r (2.7) BS01 rna ? GO:0003735 ... Q5SLQ0 38359125
    890987 8ud6:2s (2.7) BS01 rna ? GO:0000028 ... Q5SHP2 38359125
    890988 8ud6:2t (2.7) BS01 rna ? GO:0003723 ... P80380 38359125
    890989 8ud7:10 (2.55) BS01 rna ? GO:0003735 ... P60493 38359125
    890990 8ud7:10 (2.55) BS02 rna ? GO:0003735 ... P60493 38359125
    890991 8ud7:10 (2.55) BS03 MG ? GO:0003735 ... P60493 38359125
    890992 8ud7:10 (2.55) BS04 MG ? GO:0003735 ... P60493 38359125
    890993 8ud7:11 (2.55) BS01 rna ? GO:0003735 ... P60494 38359125
    890994 8ud7:11 (2.55) BS02 MG ? GO:0003735 ... P60494 38359125
    890995 8ud7:12 (2.55) BS01 rna ? GO:0003735 ... Q5SHP6 38359125
    890996 8ud7:12 (2.55) BS02 MG ? GO:0003735 ... Q5SHP6 38359125
    890997 8ud7:13 (2.55) BS01 rna ? GO:0003735 ... Q5SHQ6 38359125
    890998 8ud7:13 (2.55) BS02 rna ? GO:0003735 ... Q5SHQ6 38359125
    890999 8ud7:13 (2.55) BS03 MG ? GO:0003735 ... Q5SHQ6 38359125
    891000 8ud7:14 (2.55) BS01 rna ? GO:0003735 ... Q5SJE1 38359125

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).