SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    891001 8ud7:14 (2.55) BS02 ZN ? GO:0003735 ... Q5SJE1 38359125
    891002 8ud7:15 (2.55) BS01 rna ? GO:0003735 ... P80339 38359125
    891003 8ud7:15 (2.55) BS02 MG ? GO:0003735 ... P80339 38359125
    891004 8ud7:15 (2.55) BS03 MG ? GO:0003735 ... P80339 38359125
    891005 8ud7:15 (2.55) BS04 ZN ? GO:0003735 ... P80339 38359125
    891006 8ud7:16 (2.55) BS01 rna ? GO:0003735 ... P35871 38359125
    891007 8ud7:16 (2.55) BS02 MG ? GO:0003735 ... P35871 38359125
    891008 8ud7:16 (2.55) BS03 ZN ? GO:0003735 ... P35871 38359125
    891009 8ud7:17 (2.55) BS01 rna ? GO:0003735 ... P80340 38359125
    891010 8ud7:17 (2.55) BS02 MG ? GO:0003735 ... P80340 38359125
    891011 8ud7:17 (2.55) BS03 MG ? GO:0003735 ... P80340 38359125
    891012 8ud7:18 (2.55) BS01 rna ? GO:0003735 ... Q5SKU1 38359125
    891013 8ud7:18 (2.55) BS02 MG ? GO:0003735 ... Q5SKU1 38359125
    891014 8ud7:18 (2.55) BS03 MG ? GO:0003735 ... Q5SKU1 38359125
    891015 8ud7:18 (2.55) BS04 MG ? GO:0003735 ... Q5SKU1 38359125
    891016 8ud7:19 (2.55) BS01 rna ? GO:0003735 ... Q5SHR2 38359125
    891017 8ud7:19 (2.55) BS02 ZN ? GO:0003735 ... Q5SHR2 38359125
    891018 8ud7:1D (2.55) BS01 rna ? GO:0002181 ... P60405 38359125
    891019 8ud7:1D (2.55) BS02 rna ? GO:0002181 ... P60405 38359125
    891020 8ud7:1D (2.55) BS03 MG ? GO:0002181 ... P60405 38359125
    891021 8ud7:1D (2.55) BS04 MG ? GO:0002181 ... P60405 38359125
    891022 8ud7:1D (2.55) BS05 MG ? GO:0002181 ... P60405 38359125
    891023 8ud7:1D (2.55) BS06 MG ? GO:0002181 ... P60405 38359125
    891024 8ud7:1D (2.55) BS07 MG ? GO:0002181 ... P60405 38359125
    891025 8ud7:1D (2.55) BS08 MG ? GO:0002181 ... P60405 38359125
    891026 8ud7:1D (2.55) BS09 MG ? GO:0002181 ... P60405 38359125
    891027 8ud7:1D (2.55) BS10 MG ? GO:0002181 ... P60405 38359125
    891028 8ud7:1D (2.55) BS11 MG ? GO:0002181 ... P60405 38359125
    891029 8ud7:1D (2.55) BS12 MG ? GO:0002181 ... P60405 38359125
    891030 8ud7:1E (2.55) BS01 rna ? GO:0003735 ... Q5SHN8 38359125
    891031 8ud7:1E (2.55) BS02 MG ? GO:0003735 ... Q5SHN8 38359125
    891032 8ud7:1E (2.55) BS03 MG ? GO:0003735 ... Q5SHN8 38359125
    891033 8ud7:1E (2.55) BS04 MG ? GO:0003735 ... Q5SHN8 38359125
    891034 8ud7:1E (2.55) BS05 MG ? GO:0003735 ... Q5SHN8 38359125
    891035 8ud7:1E (2.55) BS06 MG ? GO:0003735 ... Q5SHN8 38359125
    891036 8ud7:1F (2.55) BS01 rna ? GO:0003735 ... Q5SHN9 38359125
    891037 8ud7:1F (2.55) BS02 MG ? GO:0003735 ... Q5SHN9 38359125
    891038 8ud7:1F (2.55) BS03 MG ? GO:0003735 ... Q5SHN9 38359125
    891039 8ud7:1F (2.55) BS04 MG ? GO:0003735 ... Q5SHN9 38359125
    891040 8ud7:1F (2.55) BS05 MG ? GO:0003735 ... Q5SHN9 38359125
    891041 8ud7:1F (2.55) BS06 MG ? GO:0003735 ... Q5SHN9 38359125
    891042 8ud7:1F (2.55) BS07 MG ? GO:0003735 ... Q5SHN9 38359125
    891043 8ud7:1F (2.55) BS08 MG ? GO:0003735 ... Q5SHN9 38359125
    891044 8ud7:1F (2.55) BS09 MG ? GO:0003735 ... Q5SHN9 38359125
    891045 8ud7:1F (2.55) BS10 MG ? GO:0003735 ... Q5SHN9 38359125
    891046 8ud7:1F (2.55) BS11 MG ? GO:0003735 ... Q5SHN9 38359125
    891047 8ud7:1F (2.55) BS12 MG ? GO:0003735 ... Q5SHN9 38359125
    891048 8ud7:1G (2.55) BS01 rna ? GO:0000049 ... Q5SHQ0 38359125
    891049 8ud7:1G (2.55) BS02 rna ? GO:0000049 ... Q5SHQ0 38359125
    891050 8ud7:1G (2.55) BS03 rna ? GO:0000049 ... Q5SHQ0 38359125
    891051 8ud7:1G (2.55) BS04 MG ? GO:0000049 ... Q5SHQ0 38359125
    891052 8ud7:1H (2.55) BS01 rna ? GO:0002181 ... P0DOY8 38359125
    891053 8ud7:1I (2.55) BS01 rna ? GO:0003735 ... Q5SLQ1 38359125
    891054 8ud7:1I (2.55) BS02 MG ? GO:0003735 ... Q5SLQ1 38359125
    891055 8ud7:1N (2.55) BS01 rna ? GO:0003729 ... P60488 38359125
    891056 8ud7:1N (2.55) BS02 MG ? GO:0003729 ... P60488 38359125
    891057 8ud7:1N (2.55) BS03 MG ? GO:0003729 ... P60488 38359125
    891058 8ud7:1O (2.55) BS01 rna ? GO:0003735 ... Q5SHP8 38359125
    891059 8ud7:1O (2.55) BS02 rna ? GO:0003735 ... Q5SHP8 38359125
    891060 8ud7:1O (2.55) BS03 MG ? GO:0003735 ... Q5SHP8 38359125
    891061 8ud7:1O (2.55) BS04 MG ? GO:0003735 ... Q5SHP8 38359125
    891062 8ud7:1P (2.55) BS01 rna ? GO:0003735 ... Q5SHQ7 38359125
    891063 8ud7:1P (2.55) BS02 MG ? GO:0003735 ... Q5SHQ7 38359125
    891064 8ud7:1P (2.55) BS03 MG ? GO:0003735 ... Q5SHQ7 38359125
    891065 8ud7:1P (2.55) BS04 MG ? GO:0003735 ... Q5SHQ7 38359125
    891066 8ud7:1P (2.55) BS05 MG ? GO:0003735 ... Q5SHQ7 38359125
    891067 8ud7:1P (2.55) BS06 MG ? GO:0003735 ... Q5SHQ7 38359125
    891068 8ud7:1Q (2.55) BS01 rna ? GO:0003735 ... P60489 38359125
    891069 8ud7:1Q (2.55) BS02 rna ? GO:0003735 ... P60489 38359125
    891070 8ud7:1Q (2.55) BS03 rna ? GO:0003735 ... P60489 38359125
    891071 8ud7:1Q (2.55) BS04 MG ? GO:0003735 ... P60489 38359125
    891072 8ud7:1Q (2.55) BS05 MG ? GO:0003735 ... P60489 38359125
    891073 8ud7:1Q (2.55) BS06 MG ? GO:0003735 ... P60489 38359125
    891074 8ud7:1Q (2.55) BS07 MG ? GO:0003735 ... P60489 38359125
    891075 8ud7:1Q (2.55) BS08 MG ? GO:0003735 ... P60489 38359125
    891076 8ud7:1R (2.55) BS01 rna ? GO:0003735 ... Q9Z9H5 38359125
    891077 8ud7:1R (2.55) BS02 MG ? GO:0003735 ... Q9Z9H5 38359125
    891078 8ud7:1R (2.55) BS03 MG ? GO:0003735 ... Q9Z9H5 38359125
    891079 8ud7:1S (2.55) BS01 rna ? GO:0003735 ... Q5SHQ4 38359125
    891080 8ud7:1S (2.55) BS02 rna ? GO:0003735 ... Q5SHQ4 38359125
    891081 8ud7:1S (2.55) BS03 MG ? GO:0003735 ... Q5SHQ4 38359125
    891082 8ud7:1S (2.55) BS04 MG ? GO:0003735 ... Q5SHQ4 38359125
    891083 8ud7:1T (2.55) BS01 rna ? GO:0003735 ... P60490 38359125
    891084 8ud7:1T (2.55) BS02 rna ? GO:0003735 ... P60490 38359125
    891085 8ud7:1U (2.55) BS01 rna ? GO:0000027 ... P60491 38359125
    891086 8ud7:1U (2.55) BS02 MG ? GO:0000027 ... P60491 38359125
    891087 8ud7:1U (2.55) BS03 MG ? GO:0000027 ... P60491 38359125
    891088 8ud7:1U (2.55) BS04 MG ? GO:0000027 ... P60491 38359125
    891089 8ud7:1U (2.55) BS05 MG ? GO:0000027 ... P60491 38359125
    891090 8ud7:1U (2.55) BS06 MG ? GO:0000027 ... P60491 38359125
    891091 8ud7:1U (2.55) BS07 MG ? GO:0000027 ... P60491 38359125
    891092 8ud7:1U (2.55) BS08 MG ? GO:0000027 ... P60491 38359125
    891093 8ud7:1U (2.55) BS09 MG ? GO:0000027 ... P60491 38359125
    891094 8ud7:1U (2.55) BS10 MG ? GO:0000027 ... P60491 38359125
    891095 8ud7:1U (2.55) BS11 MG ? GO:0000027 ... P60491 38359125
    891096 8ud7:1V (2.55) BS01 rna ? GO:0003723 ... P60492 38359125
    891097 8ud7:1V (2.55) BS02 MG ? GO:0003723 ... P60492 38359125
    891098 8ud7:1V (2.55) BS03 MG ? GO:0003723 ... P60492 38359125
    891099 8ud7:1V (2.55) BS04 MG ? GO:0003723 ... P60492 38359125
    891100 8ud7:1V (2.55) BS05 MG ? GO:0003723 ... P60492 38359125
    891101 8ud7:1V (2.55) BS06 MG ? GO:0003723 ... P60492 38359125
    891102 8ud7:1V (2.55) BS07 MG ? GO:0003723 ... P60492 38359125
    891103 8ud7:1W (2.55) BS01 rna ? GO:0003735 ... Q5SHP3 38359125
    891104 8ud7:1W (2.55) BS02 MG ? GO:0003735 ... Q5SHP3 38359125
    891105 8ud7:1W (2.55) BS03 MG ? GO:0003735 ... Q5SHP3 38359125
    891106 8ud7:1W (2.55) BS04 MG ? GO:0003735 ... Q5SHP3 38359125
    891107 8ud7:1W (2.55) BS05 MG ? GO:0003735 ... Q5SHP3 38359125
    891108 8ud7:1W (2.55) BS06 MG ? GO:0003735 ... Q5SHP3 38359125
    891109 8ud7:1X (2.55) BS01 rna ? GO:0003735 ... Q5SHP0 38359125
    891110 8ud7:1X (2.55) BS02 MG ? GO:0003735 ... Q5SHP0 38359125
    891111 8ud7:1X (2.55) BS03 MG ? GO:0003735 ... Q5SHP0 38359125
    891112 8ud7:1X (2.55) BS04 MG ? GO:0003735 ... Q5SHP0 38359125
    891113 8ud7:1X (2.55) BS05 MG ? GO:0003735 ... Q5SHP0 38359125
    891114 8ud7:1X (2.55) BS06 MG ? GO:0003735 ... Q5SHP0 38359125
    891115 8ud7:1Y (2.55) BS01 rna ? GO:0003723 ... Q5SHP9 38359125
    891116 8ud7:1Y (2.55) BS02 MG ? GO:0003723 ... Q5SHP9 38359125
    891117 8ud7:1Y (2.55) BS03 ZN ? GO:0003723 ... Q5SHP9 38359125
    891118 8ud7:1Z (2.55) BS01 rna ? GO:0003723 ... Q5SHZ1 38359125
    891119 8ud7:1Z (2.55) BS02 rna ? GO:0003723 ... Q5SHZ1 38359125
    891120 8ud7:1b (2.55) BS01 rna ? GO:0003735 ... P80371 38359125
    891121 8ud7:1c (2.55) BS01 rna ? GO:0003676 ... P80372 38359125
    891122 8ud7:1d (2.55) BS01 rna ? GO:0003723 ... P80373 38359125
    891123 8ud7:1d (2.55) BS02 SF4 ? GO:0003723 ... P80373 38359125
    891124 8ud7:1e (2.55) BS01 rna ? GO:0003723 ... Q5SHQ5 38359125
    891125 8ud7:1e (2.55) BS02 MG ? GO:0003723 ... Q5SHQ5 38359125
    891126 8ud7:1f (2.55) BS01 rna ? GO:0003735 ... Q5SLP8 38359125
    891127 8ud7:1g (2.55) BS01 rna ? GO:0000049 ... P17291 38359125
    891128 8ud7:1g (2.55) BS02 rna ? GO:0000049 ... P17291 38359125
    891129 8ud7:1h (2.55) BS01 rna ? GO:0003735 ... P0DOY9 38359125
    891130 8ud7:1i (2.55) BS01 rna ? GO:0003723 ... P80374 38359125
    891131 8ud7:1i (2.55) BS02 rna ? GO:0003723 ... P80374 38359125
    891132 8ud7:1j (2.55) BS01 rna ? GO:0000049 ... Q5SHN7 38359125
    891133 8ud7:1k (2.55) BS01 rna ? GO:0003735 ... P80376 38359125
    891134 8ud7:1k (2.55) BS02 MG ? GO:0003735 ... P80376 38359125
    891135 8ud7:1l (2.55) BS01 rna ? GO:0000049 ... Q5SHN3 38359125
    891136 8ud7:1l (2.55) BS02 MG ? GO:0000049 ... Q5SHN3 38359125
    891137 8ud7:1m (2.55) BS01 rna ? GO:0000049 ... P80377 38359125
    891138 8ud7:1m (2.55) BS02 rna ? GO:0000049 ... P80377 38359125
    891139 8ud7:1m (2.55) BS03 rna ? GO:0000049 ... P80377 38359125
    891140 8ud7:1m (2.55) BS04 MG ? GO:0000049 ... P80377 38359125
    891141 8ud7:1n (2.55) BS01 rna ? GO:0003735 ... P0DOY6 38359125
    891142 8ud7:1n (2.55) BS02 ZN ? GO:0003735 ... P0DOY6 38359125
    891143 8ud7:1o (2.55) BS01 rna ? GO:0003735 ... Q5SJ76 38359125
    891144 8ud7:1o (2.55) BS02 rna ? GO:0003735 ... Q5SJ76 38359125
    891145 8ud7:1p (2.55) BS01 rna ? GO:0003735 ... Q5SJH3 38359125
    891146 8ud7:1q (2.55) BS01 rna ? GO:0003735 ... P0DOY7 38359125
    891147 8ud7:1r (2.55) BS01 rna ? GO:0003735 ... Q5SLQ0 38359125
    891148 8ud7:1s (2.55) BS01 rna ? GO:0000028 ... Q5SHP2 38359125
    891149 8ud7:1t (2.55) BS01 rna ? GO:0003723 ... P80380 38359125
    891150 8ud7:1t (2.55) BS02 MG ? GO:0003723 ... P80380 38359125
    891151 8ud7:20 (2.55) BS01 rna ? GO:0003735 ... P60493 38359125
    891152 8ud7:20 (2.55) BS02 rna ? GO:0003735 ... P60493 38359125
    891153 8ud7:20 (2.55) BS03 rna ? GO:0003735 ... P60493 38359125
    891154 8ud7:21 (2.55) BS01 rna ? GO:0003735 ... P60494 38359125
    891155 8ud7:22 (2.55) BS01 rna ? GO:0003735 ... Q5SHP6 38359125
    891156 8ud7:23 (2.55) BS01 rna ? GO:0003735 ... Q5SHQ6 38359125
    891157 8ud7:23 (2.55) BS02 rna ? GO:0003735 ... Q5SHQ6 38359125
    891158 8ud7:24 (2.55) BS01 rna ? GO:0003735 ... Q5SJE1 38359125
    891159 8ud7:24 (2.55) BS02 ZN ? GO:0003735 ... Q5SJE1 38359125
    891160 8ud7:25 (2.55) BS01 rna ? GO:0003735 ... P80339 38359125
    891161 8ud7:25 (2.55) BS02 MG ? GO:0003735 ... P80339 38359125
    891162 8ud7:25 (2.55) BS03 ZN ? GO:0003735 ... P80339 38359125
    891163 8ud7:26 (2.55) BS01 rna ? GO:0003735 ... P35871 38359125
    891164 8ud7:26 (2.55) BS02 ZN ? GO:0003735 ... P35871 38359125
    891165 8ud7:27 (2.55) BS01 rna ? GO:0003735 ... P80340 38359125
    891166 8ud7:27 (2.55) BS02 MG ? GO:0003735 ... P80340 38359125
    891167 8ud7:27 (2.55) BS03 MG ? GO:0003735 ... P80340 38359125
    891168 8ud7:28 (2.55) BS01 rna ? GO:0003735 ... Q5SKU1 38359125
    891169 8ud7:29 (2.55) BS01 rna ? GO:0003735 ... Q5SHR2 38359125
    891170 8ud7:29 (2.55) BS02 ZN ? GO:0003735 ... Q5SHR2 38359125
    891171 8ud7:2D (2.55) BS01 rna ? GO:0002181 ... P60405 38359125
    891172 8ud7:2D (2.55) BS02 rna ? GO:0002181 ... P60405 38359125
    891173 8ud7:2D (2.55) BS03 MG ? GO:0002181 ... P60405 38359125
    891174 8ud7:2D (2.55) BS04 MG ? GO:0002181 ... P60405 38359125
    891175 8ud7:2D (2.55) BS05 MG ? GO:0002181 ... P60405 38359125
    891176 8ud7:2D (2.55) BS06 MG ? GO:0002181 ... P60405 38359125
    891177 8ud7:2D (2.55) BS07 MG ? GO:0002181 ... P60405 38359125
    891178 8ud7:2E (2.55) BS01 rna ? GO:0003735 ... Q5SHN8 38359125
    891179 8ud7:2F (2.55) BS01 rna ? GO:0003735 ... Q5SHN9 38359125
    891180 8ud7:2F (2.55) BS02 MG ? GO:0003735 ... Q5SHN9 38359125
    891181 8ud7:2F (2.55) BS03 MG ? GO:0003735 ... Q5SHN9 38359125
    891182 8ud7:2F (2.55) BS04 MG ? GO:0003735 ... Q5SHN9 38359125
    891183 8ud7:2G (2.55) BS01 rna ? GO:0000049 ... Q5SHQ0 38359125
    891184 8ud7:2G (2.55) BS02 rna ? GO:0000049 ... Q5SHQ0 38359125
    891185 8ud7:2G (2.55) BS03 rna ? GO:0000049 ... Q5SHQ0 38359125
    891186 8ud7:2G (2.55) BS04 MG ? GO:0000049 ... Q5SHQ0 38359125
    891187 8ud7:2H (2.55) BS01 rna ? GO:0002181 ... P0DOY8 38359125
    891188 8ud7:2I (2.55) BS01 rna ? GO:0003735 ... Q5SLQ1 38359125
    891189 8ud7:2N (2.55) BS01 rna ? GO:0003729 ... P60488 38359125
    891190 8ud7:2O (2.55) BS01 rna ? GO:0003735 ... Q5SHP8 38359125
    891191 8ud7:2O (2.55) BS02 rna ? GO:0003735 ... Q5SHP8 38359125
    891192 8ud7:2P (2.55) BS01 rna ? GO:0003735 ... Q5SHQ7 38359125
    891193 8ud7:2Q (2.55) BS01 rna ? GO:0003735 ... P60489 38359125
    891194 8ud7:2Q (2.55) BS02 rna ? GO:0003735 ... P60489 38359125
    891195 8ud7:2Q (2.55) BS03 rna ? GO:0003735 ... P60489 38359125
    891196 8ud7:2Q (2.55) BS04 MG ? GO:0003735 ... P60489 38359125
    891197 8ud7:2Q (2.55) BS05 MG ? GO:0003735 ... P60489 38359125
    891198 8ud7:2Q (2.55) BS06 MG ? GO:0003735 ... P60489 38359125
    891199 8ud7:2R (2.55) BS01 rna ? GO:0003735 ... Q9Z9H5 38359125
    891200 8ud7:2S (2.55) BS01 rna ? GO:0003735 ... Q5SHQ4 38359125

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).