SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    891401 8ud8:1m (2.6) BS03 rna ? GO:0000049 ... P80377 38359125
    891402 8ud8:1m (2.6) BS04 MG ? GO:0000049 ... P80377 38359125
    891403 8ud8:1n (2.6) BS01 rna ? GO:0003735 ... P0DOY6 38359125
    891404 8ud8:1n (2.6) BS02 ZN ? GO:0003735 ... P0DOY6 38359125
    891405 8ud8:1o (2.6) BS01 rna ? GO:0003735 ... Q5SJ76 38359125
    891406 8ud8:1o (2.6) BS02 rna ? GO:0003735 ... Q5SJ76 38359125
    891407 8ud8:1p (2.6) BS01 rna ? GO:0003735 ... Q5SJH3 38359125
    891408 8ud8:1q (2.6) BS01 rna ? GO:0003735 ... P0DOY7 38359125
    891409 8ud8:1r (2.6) BS01 rna ? GO:0003735 ... Q5SLQ0 38359125
    891410 8ud8:1s (2.6) BS01 rna ? GO:0000028 ... Q5SHP2 38359125
    891411 8ud8:1t (2.6) BS01 rna ? GO:0003723 ... P80380 38359125
    891412 8ud8:20 (2.6) BS01 rna ? GO:0003735 ... P60493 38359125
    891413 8ud8:20 (2.6) BS02 rna ? GO:0003735 ... P60493 38359125
    891414 8ud8:20 (2.6) BS03 rna ? GO:0003735 ... P60493 38359125
    891415 8ud8:21 (2.6) BS01 rna ? GO:0003735 ... P60494 38359125
    891416 8ud8:22 (2.6) BS01 rna ? GO:0003735 ... Q5SHP6 38359125
    891417 8ud8:23 (2.6) BS01 rna ? GO:0003735 ... Q5SHQ6 38359125
    891418 8ud8:23 (2.6) BS02 rna ? GO:0003735 ... Q5SHQ6 38359125
    891419 8ud8:23 (2.6) BS03 MG ? GO:0003735 ... Q5SHQ6 38359125
    891420 8ud8:24 (2.6) BS01 rna ? GO:0003735 ... Q5SJE1 38359125
    891421 8ud8:24 (2.6) BS02 ZN ? GO:0003735 ... Q5SJE1 38359125
    891422 8ud8:25 (2.6) BS01 rna ? GO:0003735 ... P80339 38359125
    891423 8ud8:25 (2.6) BS02 MG ? GO:0003735 ... P80339 38359125
    891424 8ud8:25 (2.6) BS03 ZN ? GO:0003735 ... P80339 38359125
    891425 8ud8:26 (2.6) BS01 rna ? GO:0003735 ... P35871 38359125
    891426 8ud8:26 (2.6) BS02 MG ? GO:0003735 ... P35871 38359125
    891427 8ud8:26 (2.6) BS03 ZN ? GO:0003735 ... P35871 38359125
    891428 8ud8:27 (2.6) BS01 rna ? GO:0003735 ... P80340 38359125
    891429 8ud8:27 (2.6) BS02 MG ? GO:0003735 ... P80340 38359125
    891430 8ud8:28 (2.6) BS01 rna ? GO:0003735 ... Q5SKU1 38359125
    891431 8ud8:29 (2.6) BS01 rna ? GO:0003735 ... Q5SHR2 38359125
    891432 8ud8:29 (2.6) BS02 ZN ? GO:0003735 ... Q5SHR2 38359125
    891433 8ud8:2D (2.6) BS01 rna ? GO:0002181 ... P60405 38359125
    891434 8ud8:2D (2.6) BS02 rna ? GO:0002181 ... P60405 38359125
    891435 8ud8:2D (2.6) BS03 MG ? GO:0002181 ... P60405 38359125
    891436 8ud8:2D (2.6) BS04 MG ? GO:0002181 ... P60405 38359125
    891437 8ud8:2D (2.6) BS05 MG ? GO:0002181 ... P60405 38359125
    891438 8ud8:2D (2.6) BS06 MG ? GO:0002181 ... P60405 38359125
    891439 8ud8:2D (2.6) BS07 MG ? GO:0002181 ... P60405 38359125
    891440 8ud8:2E (2.6) BS01 rna ? GO:0003735 ... Q5SHN8 38359125
    891441 8ud8:2E (2.6) BS02 MG ? GO:0003735 ... Q5SHN8 38359125
    891442 8ud8:2F (2.6) BS01 rna ? GO:0003735 ... Q5SHN9 38359125
    891443 8ud8:2F (2.6) BS02 MG ? GO:0003735 ... Q5SHN9 38359125
    891444 8ud8:2F (2.6) BS03 MG ? GO:0003735 ... Q5SHN9 38359125
    891445 8ud8:2F (2.6) BS04 MG ? GO:0003735 ... Q5SHN9 38359125
    891446 8ud8:2F (2.6) BS05 MG ? GO:0003735 ... Q5SHN9 38359125
    891447 8ud8:2G (2.6) BS01 rna ? GO:0000049 ... Q5SHQ0 38359125
    891448 8ud8:2G (2.6) BS02 rna ? GO:0000049 ... Q5SHQ0 38359125
    891449 8ud8:2G (2.6) BS03 rna ? GO:0000049 ... Q5SHQ0 38359125
    891450 8ud8:2G (2.6) BS04 MG ? GO:0000049 ... Q5SHQ0 38359125
    891451 8ud8:2H (2.6) BS01 rna ? GO:0002181 ... P0DOY8 38359125
    891452 8ud8:2I (2.6) BS01 rna ? GO:0003735 ... Q5SLQ1 38359125
    891453 8ud8:2N (2.6) BS01 rna ? GO:0003729 ... P60488 38359125
    891454 8ud8:2O (2.6) BS01 rna ? GO:0003735 ... Q5SHP8 38359125
    891455 8ud8:2O (2.6) BS02 rna ? GO:0003735 ... Q5SHP8 38359125
    891456 8ud8:2P (2.6) BS01 rna ? GO:0003735 ... Q5SHQ7 38359125
    891457 8ud8:2Q (2.6) BS01 rna ? GO:0003735 ... P60489 38359125
    891458 8ud8:2Q (2.6) BS02 rna ? GO:0003735 ... P60489 38359125
    891459 8ud8:2Q (2.6) BS03 rna ? GO:0003735 ... P60489 38359125
    891460 8ud8:2Q (2.6) BS04 MG ? GO:0003735 ... P60489 38359125
    891461 8ud8:2Q (2.6) BS05 MG ? GO:0003735 ... P60489 38359125
    891462 8ud8:2Q (2.6) BS06 MG ? GO:0003735 ... P60489 38359125
    891463 8ud8:2R (2.6) BS01 rna ? GO:0003735 ... Q9Z9H5 38359125
    891464 8ud8:2S (2.6) BS01 rna ? GO:0003735 ... Q5SHQ4 38359125
    891465 8ud8:2S (2.6) BS02 rna ? GO:0003735 ... Q5SHQ4 38359125
    891466 8ud8:2T (2.6) BS01 rna ? GO:0003735 ... P60490 38359125
    891467 8ud8:2T (2.6) BS02 rna ? GO:0003735 ... P60490 38359125
    891468 8ud8:2T (2.6) BS03 MG ? GO:0003735 ... P60490 38359125
    891469 8ud8:2U (2.6) BS01 rna ? GO:0000027 ... P60491 38359125
    891470 8ud8:2U (2.6) BS02 MG ? GO:0000027 ... P60491 38359125
    891471 8ud8:2V (2.6) BS01 rna ? GO:0003723 ... P60492 38359125
    891472 8ud8:2V (2.6) BS02 MG ? GO:0003723 ... P60492 38359125
    891473 8ud8:2W (2.6) BS01 rna ? GO:0003735 ... Q5SHP3 38359125
    891474 8ud8:2W (2.6) BS02 MG ? GO:0003735 ... Q5SHP3 38359125
    891475 8ud8:2X (2.6) BS01 rna ? GO:0003735 ... Q5SHP0 38359125
    891476 8ud8:2X (2.6) BS02 MG ? GO:0003735 ... Q5SHP0 38359125
    891477 8ud8:2Y (2.6) BS01 rna ? GO:0003723 ... Q5SHP9 38359125
    891478 8ud8:2Y (2.6) BS02 ZN ? GO:0003723 ... Q5SHP9 38359125
    891479 8ud8:2Z (2.6) BS01 rna ? GO:0003723 ... Q5SHZ1 38359125
    891480 8ud8:2Z (2.6) BS02 rna ? GO:0003723 ... Q5SHZ1 38359125
    891481 8ud8:2Z (2.6) BS03 MG ? GO:0003723 ... Q5SHZ1 38359125
    891482 8ud8:2b (2.6) BS01 rna ? GO:0003735 ... P80371 38359125
    891483 8ud8:2c (2.6) BS01 rna ? GO:0003676 ... P80372 38359125
    891484 8ud8:2d (2.6) BS01 rna ? GO:0003723 ... P80373 38359125
    891485 8ud8:2d (2.6) BS02 MG ? GO:0003723 ... P80373 38359125
    891486 8ud8:2d (2.6) BS03 SF4 ? GO:0003723 ... P80373 38359125
    891487 8ud8:2e (2.6) BS01 rna ? GO:0003723 ... Q5SHQ5 38359125
    891488 8ud8:2e (2.6) BS02 MG ? GO:0003723 ... Q5SHQ5 38359125
    891489 8ud8:2f (2.6) BS01 rna ? GO:0003735 ... Q5SLP8 38359125
    891490 8ud8:2f (2.6) BS02 MG ? GO:0003735 ... Q5SLP8 38359125
    891491 8ud8:2g (2.6) BS01 rna ? GO:0000049 ... P17291 38359125
    891492 8ud8:2g (2.6) BS02 rna ? GO:0000049 ... P17291 38359125
    891493 8ud8:2h (2.6) BS01 rna ? GO:0003735 ... P0DOY9 38359125
    891494 8ud8:2i (2.6) BS01 rna ? GO:0003723 ... P80374 38359125
    891495 8ud8:2i (2.6) BS02 rna ? GO:0003723 ... P80374 38359125
    891496 8ud8:2j (2.6) BS01 rna ? GO:0000049 ... Q5SHN7 38359125
    891497 8ud8:2j (2.6) BS02 MG ? GO:0000049 ... Q5SHN7 38359125
    891498 8ud8:2k (2.6) BS01 rna ? GO:0003735 ... P80376 38359125
    891499 8ud8:2k (2.6) BS02 MG ? GO:0003735 ... P80376 38359125
    891500 8ud8:2l (2.6) BS01 rna ? GO:0000049 ... Q5SHN3 38359125
    891501 8ud8:2l (2.6) BS02 MG ? GO:0000049 ... Q5SHN3 38359125
    891502 8ud8:2l (2.6) BS03 MG ? GO:0000049 ... Q5SHN3 38359125
    891503 8ud8:2m (2.6) BS01 rna ? GO:0000049 ... P80377 38359125
    891504 8ud8:2m (2.6) BS02 rna ? GO:0000049 ... P80377 38359125
    891505 8ud8:2m (2.6) BS03 rna ? GO:0000049 ... P80377 38359125
    891506 8ud8:2n (2.6) BS01 rna ? GO:0003735 ... P0DOY6 38359125
    891507 8ud8:2n (2.6) BS02 ZN ? GO:0003735 ... P0DOY6 38359125
    891508 8ud8:2o (2.6) BS01 rna ? GO:0003735 ... Q5SJ76 38359125
    891509 8ud8:2o (2.6) BS02 rna ? GO:0003735 ... Q5SJ76 38359125
    891510 8ud8:2p (2.6) BS01 rna ? GO:0003735 ... Q5SJH3 38359125
    891511 8ud8:2q (2.6) BS01 rna ? GO:0003735 ... P0DOY7 38359125
    891512 8ud8:2q (2.6) BS02 MG ? GO:0003735 ... P0DOY7 38359125
    891513 8ud8:2q (2.6) BS03 MG ? GO:0003735 ... P0DOY7 38359125
    891514 8ud8:2r (2.6) BS01 rna ? GO:0003735 ... Q5SLQ0 38359125
    891515 8ud8:2s (2.6) BS01 rna ? GO:0000028 ... Q5SHP2 38359125
    891516 8ud8:2t (2.6) BS01 rna ? GO:0003723 ... P80380 38359125
    891517 8ud8:2t (2.6) BS02 MG ? GO:0003723 ... P80380 38359125
    891518 8ud9:L (2.04) BS01 YRE 3.4.25.1 GO:0004298 ... P28074 38097652
    891519 8ud9:M (2.04) BS01 YRE 3.4.25.1 GO:0005839 ... P20618 38097652
    891520 8ud9:Z (2.04) BS01 YRE 3.4.25.1 GO:0004298 ... P28074 38097652
    891521 8ud9:a (2.04) BS01 YRE 3.4.25.1 GO:0005839 ... P20618 38097652
    891522 8uda:B (2.8) BS01 GSH N/A GO:0004364 ... T1K577 N/A
    891523 8udb:A (2.75) BS01 GSH N/A GO:0004364 ... T1K577 N/A
    891524 8udb:B (2.75) BS01 GSH N/A GO:0004364 ... T1K577 N/A
    891525 8udc:A (3.1) BS01 WCK 2.7.11.1 GO:0004672 ... D6WMX4 38565869
    891526 8udd:A (2.65) BS01 GSH N/A GO:0004364 ... T1K577 N/A
    891527 8udd:B (2.65) BS01 GSH N/A GO:0004364 ... T1K577 N/A
    891528 8ude:A (2.25) BS01 GSH N/A GO:0004364 ... T1K569 N/A
    891529 8ude:B (2.25) BS01 GSH N/A GO:0004364 ... T1K569 N/A
    891530 8ude:C (2.25) BS01 GSH N/A GO:0004364 ... T1K569 N/A
    891531 8ude:D (2.25) BS01 GSH N/A GO:0004364 ... T1K569 N/A
    891532 8udf:A (1.74) BS01 WB0 N/A GO:0008233 ... P0DTD1 39747827
    891533 8udh:A (2.05) BS01 WK6 N/A GO:0004364 ... T1K569 N/A
    891534 8udh:A (2.05) BS02 WK6 N/A GO:0004364 ... T1K569 N/A
    891535 8udh:A (2.05) BS03 WK6 N/A GO:0004364 ... T1K569 N/A
    891536 8udh:B (2.05) BS01 WK6 N/A GO:0004364 ... T1K569 N/A
    891537 8udh:B (2.05) BS02 WK6 N/A GO:0004364 ... T1K569 N/A
    891538 8udh:B (2.05) BS03 WK6 N/A GO:0004364 ... T1K569 N/A
    891539 8udi:A (2.1) BS01 DGL N/A GO:0008881 ... Q9ZLT0 N/A
    891540 8udi:A (2.1) BS02 WAW N/A GO:0008881 ... Q9ZLT0 N/A
    891541 8udi:B (2.1) BS01 DGL N/A GO:0008881 ... Q9ZLT0 N/A
    891542 8udj:A (1.85) BS01 WB5 N/A GO:0008233 ... P0DTD1 39747827
    891543 8udk:A (3.43) BS01 dna 2.7.7.7
    3.1.11.-
    4.2.99.-
    GO:0000262 ... P54098 38787958
    891544 8udk:A (3.43) BS02 dna 2.7.7.7
    3.1.11.-
    4.2.99.-
    GO:0000262 ... P54098 38787958
    891545 8udk:A (3.43) BS03 DCP 2.7.7.7
    3.1.11.-
    4.2.99.-
    GO:0000262 ... P54098 38787958
    891546 8udk:B (3.43) BS01 dna 2.7.7.7 GO:0003690 ... Q9UHN1 38787958
    891547 8udl:A (2.37) BS01 dna 2.7.7.7
    3.1.11.-
    4.2.99.-
    GO:0000262 ... P54098 38787958
    891548 8udl:A (2.37) BS02 dna 2.7.7.7
    3.1.11.-
    4.2.99.-
    GO:0000262 ... P54098 38787958
    891549 8udm:A (1.55) BS01 WBE N/A GO:0008233 ... P0DTD1 39747827
    891550 8udo:A (1.78) BS01 WBK N/A GO:0008233 ... P0DTD1 39747827
    891551 8udp:A (1.75) BS01 WBO N/A GO:0008233 ... P0DTD1 39747827
    891552 8udq:A (2.12) BS01 WC0 N/A GO:0008233 ... P0DTD1 39747827
    891553 8udr:A (3.1) BS01 peptide N/A N/A P04439 39656104
    891554 8udr:A (3.1) BS02 MOV N/A N/A P04439 39656104
    891555 8udr:D (3.1) BS01 MOV N/A N/A N/A 39656104
    891556 8udt:A (2.829) BS01 WGF 2.7.10.1 GO:0004672 ... P22607 38267212
    891557 8udt:B (2.829) BS01 WGF 2.7.10.1 GO:0004672 ... P22607 38267212
    891558 8udt:C (2.829) BS01 WGF 2.7.10.1 GO:0004672 ... P22607 38267212
    891559 8udu:A (1.737) BS01 WIQ 2.7.10.1 GO:0004672 ... P22607 38267212
    891560 8udu:B (1.737) BS01 WIQ 2.7.10.1 GO:0004672 ... P22607 38267212
    891561 8udv:A (2.348) BS01 WIQ 2.7.10.1 GO:0004672 ... P22607 38267212
    891562 8udv:B (2.348) BS01 WIQ 2.7.10.1 GO:0004672 ... P22607 38267212
    891563 8udv:C (2.348) BS01 WIQ 2.7.10.1 GO:0004672 ... P22607 38267212
    891564 8udw:A (2.1) BS01 WDK N/A GO:0008233 ... P0DTD1 39747827
    891565 8udx:A (1.79) BS01 WCZ N/A GO:0008233 ... P0DTD1 39747827
    891566 8udy:A (1.91) BS01 WD6 N/A GO:0008233 ... P0DTD1 39747827
    891567 8udy:A (1.91) BS02 CA N/A GO:0008233 ... P0DTD1 39747827
    891568 8ue0:A (2.16) BS01 WDF N/A GO:0008233 ... P0DTD1 39747827
    891569 8ue2:A (3.0) BS01 K N/A GO:0005267 ... P97438 39029456
    891570 8ue2:A (3.0) BS02 K N/A GO:0005267 ... P97438 39029456
    891571 8ue2:A (3.0) BS03 Q6F N/A GO:0005267 ... P97438 39029456
    891572 8ue2:A (3.0) BS04 K N/A GO:0005267 ... P97438 39029456
    891573 8ue2:A (3.0) BS05 K N/A GO:0005267 ... P97438 39029456
    891574 8ue2:B (3.0) BS01 K N/A GO:0005267 ... P97438 39029456
    891575 8ue2:B (3.0) BS02 K N/A GO:0005267 ... P97438 39029456
    891576 8ue2:B (3.0) BS03 K N/A GO:0005267 ... P97438 39029456
    891577 8ue2:B (3.0) BS04 K N/A GO:0005267 ... P97438 39029456
    891578 8ue2:B (3.0) BS05 K N/A GO:0005267 ... P97438 39029456
    891579 8ue2:B (3.0) BS06 Q6F N/A GO:0005267 ... P97438 39029456
    891580 8ue9:A (3.0) BS01 WUU N/A GO:0005267 ... P97438 39029456
    891581 8ue9:A (3.0) BS02 K N/A GO:0005267 ... P97438 39029456
    891582 8ue9:A (3.0) BS03 K N/A GO:0005267 ... P97438 39029456
    891583 8ue9:A (3.0) BS04 K N/A GO:0005267 ... P97438 39029456
    891584 8ue9:A (3.0) BS05 K N/A GO:0005267 ... P97438 39029456
    891585 8ue9:B (3.0) BS01 K N/A GO:0005267 ... P97438 39029456
    891586 8ue9:B (3.0) BS02 K N/A GO:0005267 ... P97438 39029456
    891587 8ue9:B (3.0) BS03 K N/A GO:0005267 ... P97438 39029456
    891588 8ue9:B (3.0) BS04 K N/A GO:0005267 ... P97438 39029456
    891589 8ue9:B (3.0) BS05 WUU N/A GO:0005267 ... P97438 39029456
    891590 8uea:A (1.94) BS01 WDQ N/A GO:0008233 ... P0DTD1 39747827
    891591 8ueb:A (2.03) BS01 WE8 N/A GO:0008233 ... P0DTD1 39747827
    891592 8uec:A (3.0) BS01 16C N/A GO:0005267 ... P97438 39029456
    891593 8uec:A (3.0) BS02 WUZ N/A GO:0005267 ... P97438 39029456
    891594 8uec:A (3.0) BS03 K N/A GO:0005267 ... P97438 39029456
    891595 8uec:A (3.0) BS04 K N/A GO:0005267 ... P97438 39029456
    891596 8uec:A (3.0) BS05 K N/A GO:0005267 ... P97438 39029456
    891597 8uec:A (3.0) BS06 K N/A GO:0005267 ... P97438 39029456
    891598 8uec:B (3.0) BS01 K N/A GO:0005267 ... P97438 39029456
    891599 8uec:B (3.0) BS02 K N/A GO:0005267 ... P97438 39029456
    891600 8uec:B (3.0) BS03 K N/A GO:0005267 ... P97438 39029456

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).