SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 4459 4460 4461 4462 4463 4464 4465 4466 4467 4468 4469 4470 4471 4472 4473 4474 4475 4476 4477 4478 4479 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    893601 8un7:C (3.55) BS01 CA ? N/A P55083 38740766
    893602 8un7:D (3.55) BS01 CA ? N/A P55083 38740766
    893603 8un7:E (3.55) BS01 CA ? N/A P55083 38740766
    893604 8un7:F (3.55) BS01 CA ? N/A P55083 38740766
    893605 8un7:G (3.55) BS01 CA ? N/A P55083 38740766
    893606 8un7:H (3.55) BS01 CA ? N/A P55083 38740766
    893607 8un9:A (2.103) BS01 MG ? GO:0003676 ... P50837 38661211
    893608 8un9:B (2.103) BS01 MG ? GO:0003676 ... P50837 38661211
    893609 8und:A (1.9) BS01 X4N N/A GO:0008233 ... A0A6C1F1G5 38335815
    893610 8unf:A (3.15) BS01 dna ? GO:0003677 ... P04527 38177685
    893611 8unf:B (3.15) BS01 dna 3.6.4.- GO:0000166 ... P04526 38177685
    893612 8unf:B (3.15) BS02 08T 3.6.4.- GO:0000166 ... P04526 38177685
    893613 8unf:B (3.15) BS03 MG 3.6.4.- GO:0000166 ... P04526 38177685
    893614 8unf:C (3.15) BS01 dna 3.6.4.- GO:0000166 ... P04526 38177685
    893615 8unf:C (3.15) BS02 08T 3.6.4.- GO:0000166 ... P04526 38177685
    893616 8unf:C (3.15) BS03 MG 3.6.4.- GO:0000166 ... P04526 38177685
    893617 8unf:D (3.15) BS01 dna 3.6.4.- GO:0000166 ... P04526 38177685
    893618 8unf:D (3.15) BS02 08T 3.6.4.- GO:0000166 ... P04526 38177685
    893619 8unf:D (3.15) BS03 MG 3.6.4.- GO:0000166 ... P04526 38177685
    893620 8unf:E (3.15) BS01 dna 3.6.4.- GO:0000166 ... P04526 38177685
    893621 8unf:E (3.15) BS02 ADP 3.6.4.- GO:0000166 ... P04526 38177685
    893622 8unh:B (3.21) BS01 AGS 3.6.4.- GO:0000166 ... P04526 38177685
    893623 8unh:B (3.21) BS02 MG 3.6.4.- GO:0000166 ... P04526 38177685
    893624 8unh:E (3.21) BS01 AGS 3.6.4.- GO:0000166 ... P04526 38177685
    893625 8uni:A (3.4) BS01 peptide N/A GO:0000122 ... O60341 40175327
    893626 8uni:A (3.4) BS02 HUF N/A GO:0000122 ... O60341 40175327
    893627 8unj:B (3.35) BS01 MG ? GO:0000076 ... P35250 38669181
    893628 8unj:B (3.35) BS02 AGS ? GO:0000076 ... P35250 38669181
    893629 8unj:C (3.35) BS01 AGS ? GO:0000076 ... P40937 38669181
    893630 8unj:D (3.35) BS01 AGS ? GO:0000076 ... P35249 38669181
    893631 8unj:E (3.35) BS01 ADP ? GO:0000076 ... P40938 38669181
    893632 8unl:A (3.3) BS01 GTP ? GO:0001678 ... P63092 38480881
    893633 8unl:R (3.3) BS01 G1I ? GO:0004930 ... P07550 38480881
    893634 8unm:A (3.4) BS01 GTP ? GO:0001678 ... P63092 38480881
    893635 8unm:R (3.4) BS01 G1I ? GO:0004930 ... P07550 38480881
    893636 8unn:A (3.4) BS01 GTP ? GO:0001678 ... P63092 38480881
    893637 8unn:R (3.4) BS01 G1I ? GO:0004930 ... P07550 38480881
    893638 8uno:A (3.3) BS01 GTP ? GO:0001678 ... P63092 38480881
    893639 8uno:R (3.3) BS01 G1I ? GO:0004930 ... P07550 38480881
    893640 8unp:A (3.3) BS01 GTP ? GO:0001678 ... P63092 38480881
    893641 8unp:R (3.3) BS01 G1I ? GO:0004930 ... P07550 38480881
    893642 8unq:A (3.3) BS01 GTP ? GO:0001678 ... P63092 38480881
    893643 8unq:R (3.3) BS01 G1I ? GO:0004930 ... P07550 38480881
    893644 8unr:A (3.4) BS01 GTP ? GO:0001678 ... P63092 38480881
    893645 8unr:R (3.4) BS01 G1I ? GO:0004930 ... P07550 38480881
    893646 8uns:A (3.4) BS01 GTP ? GO:0001678 ... P63092 38480881
    893647 8uns:R (3.4) BS01 G1I ? GO:0004930 ... P07550 38480881
    893648 8unt:A (3.4) BS01 GTP ? GO:0001678 ... P63092 38480881
    893649 8unt:R (3.4) BS01 G1I ? GO:0004930 ... P07550 38480881
    893650 8unu:A (3.5) BS01 GTP ? GO:0001678 ... P63092 38480881
    893651 8unu:R (3.5) BS01 G1I ? GO:0004930 ... P07550 38480881
    893652 8unv:A (3.3) BS01 GTP ? GO:0001678 ... P63092 38480881
    893653 8unv:R (3.3) BS01 G1I ? GO:0004930 ... P07550 38480881
    893654 8unw:A (3.4) BS01 GTP ? GO:0001678 ... P63092 38480881
    893655 8unw:R (3.4) BS01 G1I ? GO:0004930 ... P07550 38480881
    893656 8unx:A (3.6) BS01 GTP ? GO:0001678 ... P63092 38480881
    893657 8unx:R (3.6) BS01 G1I ? GO:0004930 ... P07550 38480881
    893658 8uny:A (3.6) BS01 GTP ? GO:0001678 ... P63092 38480881
    893659 8uny:R (3.6) BS01 G1I ? GO:0004930 ... P07550 38480881
    893660 8unz:A (3.8) BS01 GTP ? GO:0001678 ... P63092 38480881
    893661 8unz:R (3.8) BS01 G1I ? GO:0004930 ... P07550 38480881
    893662 8uo0:A (3.5) BS01 GTP ? GO:0001678 ... P63092 38480881
    893663 8uo0:R (3.5) BS01 G1I ? GO:0004930 ... P07550 38480881
    893664 8uo1:A (3.6) BS01 GTP ? GO:0001678 ... P63092 38480881
    893665 8uo1:R (3.6) BS01 G1I ? GO:0001540 ... P07550 38480881
    893666 8uo2:A (3.6) BS01 GTP ? GO:0001678 ... P63092 38480881
    893667 8uo2:R (3.6) BS01 G1I ? GO:0004930 ... P07550 38480881
    893668 8uo3:A (3.5) BS01 GTP ? GO:0001678 ... P63092 38480881
    893669 8uo3:A (3.5) BS02 MG ? GO:0001678 ... P63092 38480881
    893670 8uo3:R (3.5) BS01 G1I ? GO:0004930 ... P07550 38480881
    893671 8uo4:A (4.0) BS01 GTP ? GO:0001678 ... P63092 38480881
    893672 8uo5:C (3.27) BS01 FE N/A GO:0000159 ... P67775 N/A
    893673 8uo5:C (3.27) BS02 ZN N/A GO:0000159 ... P67775 N/A
    893674 8uo7:A (2.2) BS01 peptide 3.4.21.4 GO:0004175 ... P00760 38306609
    893675 8uo7:A (2.2) BS02 CA 3.4.21.4 GO:0004175 ... P00760 38306609
    893676 8uo8:A (3.2) BS01 X3U ? GO:0001669 ... Q7L1I2 38898101
    893677 8uo8:A (3.2) BS02 PS1 ? GO:0001669 ... Q7L1I2 38898101
    893678 8uo8:A (3.2) BS03 9Z9 ? GO:0001669 ... Q7L1I2 38898101
    893679 8uo8:A (3.2) BS04 9Z9 ? GO:0001669 ... Q7L1I2 38898101
    893680 8uo8:A (3.2) BS05 43Y ? GO:0001669 ... Q7L1I2 38898101
    893681 8uo8:A (3.2) BS06 Y01 ? GO:0001669 ... Q7L1I2 38898101
    893682 8uo9:A (3.3) BS01 X49 ? GO:0005783 ... Q7L0J3 38898101
    893683 8uo9:A (3.3) BS02 Y01 ? GO:0005783 ... Q7L0J3 38898101
    893684 8uo9:A (3.3) BS03 PS1 ? GO:0005783 ... Q7L0J3 38898101
    893685 8uob:A (2.52) BS01 XB5 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0006508 ... P0DTD1 38547259
    893686 8uob:A (2.52) BS02 ZN 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0006508 ... P0DTD1 38547259
    893687 8uob:A (2.52) BS03 ZN 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0006508 ... P0DTD1 38547259
    893688 8uob:A (2.52) BS04 ZN 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0006508 ... P0DTD1 38547259
    893689 8uoh:B (2.15) BS01 X4W N/A GO:0004672 ... P27448 39588908
    893690 8uoi:A (1.8) BS01 X3Q N/A GO:0004672 ... P27448 39588908
    893691 8uoj:A (1.6) BS01 X5I N/A GO:0004672 ... P27448 39588908
    893692 8uok:A (1.85) BS01 X5N N/A GO:0004672 ... P27448 39588908
    893693 8uok:B (1.85) BS01 X5N N/A GO:0004672 ... P27448 39588908
    893694 8uol:A (1.9) BS01 X4H N/A GO:0004672 ... P27448 39588908
    893695 8uol:B (1.9) BS01 X4H N/A GO:0004672 ... P27448 39588908
    893696 8uom:A (3.2) BS01 peptide N/A GO:0000122 ... O60341 40175327
    893697 8uom:A (3.2) BS02 HUF N/A GO:0000122 ... O60341 40175327
    893698 8uoq:0 (3.8) BS01 SF4 N/A GO:0000019 ... P06839 39287137
    893699 8uoq:4 (3.8) BS01 ZN N/A GO:0000112 ... Q12004 39287137
    893700 8uoq:6 (3.8) BS01 ZN N/A GO:0000112 ... Q04673 39287137
    893701 8uoq:6 (3.8) BS02 ZN N/A GO:0000112 ... Q04673 39287137
    893702 8uoq:6 (3.8) BS03 ZN N/A GO:0000112 ... Q04673 39287137
    893703 8uoq:6 (3.8) BS04 ZN N/A GO:0000112 ... Q04673 39287137
    893704 8uoq:7 (3.8) BS01 dna N/A GO:0000019 ... Q00578 39287137
    893705 8uoq:7 (3.8) BS02 dna N/A GO:0000019 ... Q00578 39287137
    893706 8uoq:7 (3.8) BS03 MG N/A GO:0000019 ... Q00578 39287137
    893707 8uoq:A (3.8) BS01 dna N/A GO:0001172 ... P04050 39287137
    893708 8uoq:A (3.8) BS02 ZN N/A GO:0001172 ... P04050 39287137
    893709 8uoq:A (3.8) BS03 ZN N/A GO:0001172 ... P04050 39287137
    893710 8uoq:A (3.8) BS04 MG N/A GO:0001172 ... P04050 39287137
    893711 8uoq:B (3.8) BS01 ZN N/A GO:0001172 ... P08518 39287137
    893712 8uoq:C (3.8) BS01 ZN N/A GO:0000428 ... P16370 39287137
    893713 8uoq:I (3.8) BS01 ZN N/A GO:0001172 ... P27999 39287137
    893714 8uoq:I (3.8) BS02 ZN N/A GO:0001172 ... P27999 39287137
    893715 8uoq:J (3.8) BS01 ZN N/A GO:0001172 ... P22139 39287137
    893716 8uoq:L (3.8) BS01 ZN N/A GO:0001172 ... P40422 39287137
    893717 8uoq:M (3.8) BS01 dna N/A GO:0000993 ... P29055 39287137
    893718 8uoq:M (3.8) BS02 dna N/A GO:0000993 ... P29055 39287137
    893719 8uoq:M (3.8) BS03 ZN N/A GO:0000993 ... P29055 39287137
    893720 8uoq:O (3.8) BS01 dna N/A GO:0000126 ... P13393 39287137
    893721 8uoq:O (3.8) BS02 dna N/A GO:0000126 ... P13393 39287137
    893722 8uoq:S (3.8) BS01 ZN N/A GO:0000977 ... P07273 39287137
    893723 8uot:0 (3.7) BS01 SF4 N/A GO:0000019 ... P06839 39287137
    893724 8uot:4 (3.7) BS01 ZN N/A GO:0000112 ... Q12004 39287137
    893725 8uot:6 (3.7) BS01 ZN N/A GO:0000112 ... Q04673 39287137
    893726 8uot:6 (3.7) BS02 ZN N/A GO:0000112 ... Q04673 39287137
    893727 8uot:6 (3.7) BS03 ZN N/A GO:0000112 ... Q04673 39287137
    893728 8uot:6 (3.7) BS04 ZN N/A GO:0000112 ... Q04673 39287137
    893729 8uot:7 (3.7) BS01 dna N/A GO:0000019 ... Q00578 39287137
    893730 8uot:7 (3.7) BS02 dna N/A GO:0000019 ... Q00578 39287137
    893731 8uot:7 (3.7) BS03 MG N/A GO:0000019 ... Q00578 39287137
    893732 8uot:A (3.7) BS01 ZN N/A GO:0001172 ... P04050 39287137
    893733 8uot:A (3.7) BS02 ZN N/A GO:0001172 ... P04050 39287137
    893734 8uot:A (3.7) BS03 MG N/A GO:0001172 ... P04050 39287137
    893735 8uot:B (3.7) BS01 ZN N/A GO:0001172 ... P08518 39287137
    893736 8uot:C (3.7) BS01 ZN N/A GO:0000428 ... P16370 39287137
    893737 8uot:I (3.7) BS01 ZN N/A GO:0001172 ... P27999 39287137
    893738 8uot:I (3.7) BS02 ZN N/A GO:0001172 ... P27999 39287137
    893739 8uot:J (3.7) BS01 ZN N/A GO:0001172 ... P22139 39287137
    893740 8uot:M (3.7) BS01 dna N/A GO:0000993 ... P29055 39287137
    893741 8uot:M (3.7) BS02 ZN N/A GO:0000993 ... P29055 39287137
    893742 8uot:O (3.7) BS01 dna N/A GO:0000126 ... P13393 39287137
    893743 8uot:O (3.7) BS02 dna N/A GO:0000126 ... P13393 39287137
    893744 8uot:S (3.7) BS01 ZN N/A GO:0000977 ... P07273 39287137
    893745 8uou:A (1.35) BS01 ASP 3.5.1.1 GO:0004067 ... Q2RMX1 38501449
    893746 8uou:B (1.35) BS01 ASP 3.5.1.1 GO:0004067 ... Q2RMX1 38501449
    893747 8uoz:A (-1.00) BS01 P4P ? GO:0005886 ... P23895 38806470
    893748 8uoz:B (-1.00) BS01 P4P ? GO:0005886 ... P23895 38806470
    893749 8up3:E (1.76) BS01 ASP 3.5.1.1 GO:0004067 ... Q2RMX1 38501449
    893750 8up3:F (1.76) BS01 ASP 3.5.1.1 GO:0004067 ... Q2RMX1 38501449
    893751 8up4:A (1.51) BS01 FAD N/A GO:0071949 ... B5M9L6 40199722
    893752 8up4:B (1.51) BS01 FAD N/A GO:0071949 ... B5M9L6 40199722
    893753 8up5:B (3.56) BS01 rna N/A GO:0003824 ... Q58530 39639027
    893754 8up5:C (3.56) BS01 rna N/A N/A Q57646 39639027
    893755 8up5:K (3.56) BS01 rna N/A GO:0000408 ... Q58530 39639027
    893756 8up5:P (3.56) BS01 rna N/A N/A Q8TZI1 39639027
    893757 8up6:B (1.7) BS01 ASP 3.5.1.1 GO:0004067 ... Q2RMX1 38501449
    893758 8up6:C (1.7) BS01 ASP 3.5.1.1 GO:0004067 ... Q2RMX1 38501449
    893759 8up8:A (1.9) BS01 ASP 3.5.1.1 GO:0004067 ... Q2RMX1 38501449
    893760 8up8:B (1.9) BS01 ASP 3.5.1.1 GO:0004067 ... Q2RMX1 38501449
    893761 8up8:C (1.9) BS01 ASP 3.5.1.1 GO:0004067 ... Q2RMX1 38501449
    893762 8upf:A (3.2) BS01 dna ? GO:0000786 ... P68431 38242129
    893763 8upf:A (3.2) BS02 dna ? GO:0000786 ... P68431 38242129
    893764 8upf:B (3.2) BS01 dna ? GO:0000781 ... P62805 38242129
    893765 8upf:B (3.2) BS02 dna ? GO:0000781 ... P62805 38242129
    893766 8upf:C (3.2) BS01 dna ? GO:0000786 ... P04908 38242129
    893767 8upf:C (3.2) BS02 dna ? GO:0000786 ... P04908 38242129
    893768 8upf:D (3.2) BS01 dna ? GO:0000786 ... P06899 38242129
    893769 8upf:D (3.2) BS02 dna ? GO:0000786 ... P06899 38242129
    893770 8upf:E (3.2) BS01 dna ? GO:0000786 ... P68431 38242129
    893771 8upf:E (3.2) BS02 dna ? GO:0000786 ... P68431 38242129
    893772 8upf:F (3.2) BS01 dna ? GO:0000781 ... P62805 38242129
    893773 8upf:F (3.2) BS02 dna ? GO:0000781 ... P62805 38242129
    893774 8upf:G (3.2) BS01 dna ? GO:0000786 ... P04908 38242129
    893775 8upf:G (3.2) BS02 dna ? GO:0000786 ... P04908 38242129
    893776 8upf:H (3.2) BS01 dna ? GO:0000786 ... P06899 38242129
    893777 8upf:H (3.2) BS02 dna ? GO:0000786 ... P06899 38242129
    893778 8upf:K (3.2) BS01 ZN 2.3.2.27 N/A Q8IYW5 38242129
    893779 8upf:K (3.2) BS02 ZN 2.3.2.27 N/A Q8IYW5 38242129
    893780 8uph:A (4.13) BS01 BLA N/A GO:0000155 ... A0A1H7ZJA8 39121216
    893781 8uph:B (4.13) BS01 BLA N/A GO:0000155 ... A0A1H7ZJA8 39121216
    893782 8upi:A (1.55) BS01 CA ? GO:0015833 ... A0ACD6B9E4 38696389
    893783 8upi:A (1.55) BS02 SET ? GO:0015833 ... A0ACD6B9E4 38696389
    893784 8upk:A (3.75) BS01 BLA N/A GO:0000155 ... A0A1H7ZJA8 39121216
    893785 8upk:B (3.75) BS01 BLA N/A GO:0000155 ... A0A1H7ZJA8 39121216
    893786 8upm:A (3.75) BS01 BLA N/A GO:0000155 ... A0A1H7ZJA8 39121216
    893787 8upm:B (3.75) BS01 BLA N/A GO:0000155 ... A0A1H7ZJA8 39121216
    893788 8upn:A (2.59) BS01 MG 1.1.1.86 GO:0000287 ... Q9PHN5 N/A
    893789 8upn:A (2.59) BS02 MG 1.1.1.86 GO:0000287 ... Q9PHN5 N/A
    893790 8upn:A (2.59) BS03 NDP 1.1.1.86 GO:0000287 ... Q9PHN5 N/A
    893791 8upn:A (2.59) BS04 WXU 1.1.1.86 GO:0000287 ... Q9PHN5 N/A
    893792 8upo:0 (5.5) BS01 rna N/A GO:0002181 ... P0AG48 39117885
    893793 8upo:1 (5.5) BS01 rna ? GO:0002181 ... P61175 39117885
    893794 8upo:2 (5.5) BS01 rna N/A GO:0000027 ... P0ADZ0 39117885
    893795 8upo:3 (5.5) BS01 rna N/A GO:0000027 ... P60624 39117885
    893796 8upo:4 (5.5) BS01 rna N/A GO:0000027 ... P68919 39117885
    893797 8upo:9 (5.5) BS01 rna ? GO:0002181 ... P0A7J3 39117885
    893798 8upo:AA (5.5) BS01 dna 2.7.7.6 GO:0000345 ... P0A8V2 39117885
    893799 8upo:AA (5.5) BS02 dna 2.7.7.6 GO:0000345 ... P0A8V2 39117885
    893800 8upo:AA (5.5) BS03 rna 2.7.7.6 GO:0000345 ... P0A8V2 39117885

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).