SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    893601 8vn4:B (1.75) BS03 ZN N/A GO:0004519 ... Q94702 39141555
    893602 8vn4:B (1.75) BS04 ZN N/A GO:0004519 ... Q94702 39141555
    893603 8vn5:A (1.65) BS01 dna N/A GO:0004519 ... Q94702 39141555
    893604 8vn5:A (1.65) BS02 dna N/A GO:0004519 ... Q94702 39141555
    893605 8vn5:A (1.65) BS03 ZN N/A GO:0004519 ... Q94702 39141555
    893606 8vn5:A (1.65) BS04 ZN N/A GO:0004519 ... Q94702 39141555
    893607 8vn5:B (1.65) BS01 dna N/A GO:0004519 ... Q94702 39141555
    893608 8vn5:B (1.65) BS02 dna N/A GO:0004519 ... Q94702 39141555
    893609 8vn5:B (1.65) BS03 ZN N/A GO:0004519 ... Q94702 39141555
    893610 8vn5:B (1.65) BS04 ZN N/A GO:0004519 ... Q94702 39141555
    893611 8vn6:A (1.54) BS01 dna N/A GO:0004519 ... Q94702 39141555
    893612 8vn6:A (1.54) BS02 dna N/A GO:0004519 ... Q94702 39141555
    893613 8vn6:A (1.54) BS03 ZN N/A GO:0004519 ... Q94702 39141555
    893614 8vn6:A (1.54) BS04 ZN N/A GO:0004519 ... Q94702 39141555
    893615 8vn6:B (1.54) BS01 dna N/A GO:0004519 ... Q94702 39141555
    893616 8vn6:B (1.54) BS02 dna N/A GO:0004519 ... Q94702 39141555
    893617 8vn6:B (1.54) BS03 ZN N/A GO:0004519 ... Q94702 39141555
    893618 8vn6:B (1.54) BS04 ZN N/A GO:0004519 ... Q94702 39141555
    893619 8vn7:A (1.67) BS01 dna N/A GO:0004519 ... Q94702 39141555
    893620 8vn7:A (1.67) BS02 dna N/A GO:0004519 ... Q94702 39141555
    893621 8vn7:A (1.67) BS03 dna N/A GO:0004519 ... Q94702 39141555
    893622 8vn7:A (1.67) BS04 ZN N/A GO:0004519 ... Q94702 39141555
    893623 8vn7:A (1.67) BS05 ZN N/A GO:0004519 ... Q94702 39141555
    893624 8vn7:B (1.67) BS01 dna N/A GO:0004519 ... Q94702 39141555
    893625 8vn7:B (1.67) BS02 dna N/A GO:0004519 ... Q94702 39141555
    893626 8vn7:B (1.67) BS03 dna N/A GO:0004519 ... Q94702 39141555
    893627 8vn7:B (1.67) BS04 ZN N/A GO:0004519 ... Q94702 39141555
    893628 8vn7:B (1.67) BS05 ZN N/A GO:0004519 ... Q94702 39141555
    893629 8vn8:A (1.6) BS01 dna N/A GO:0004519 ... Q94702 39141555
    893630 8vn8:A (1.6) BS02 dna N/A GO:0004519 ... Q94702 39141555
    893631 8vn8:A (1.6) BS03 ZN N/A GO:0004519 ... Q94702 39141555
    893632 8vn8:A (1.6) BS04 ZN N/A GO:0004519 ... Q94702 39141555
    893633 8vn8:B (1.6) BS01 dna N/A GO:0004519 ... Q94702 39141555
    893634 8vn8:B (1.6) BS02 dna N/A GO:0004519 ... Q94702 39141555
    893635 8vn8:B (1.6) BS03 ZN N/A GO:0004519 ... Q94702 39141555
    893636 8vn8:B (1.6) BS04 ZN N/A GO:0004519 ... Q94702 39141555
    893637 8vn9:A (1.69) BS01 dna N/A GO:0004519 ... Q94702 39141555
    893638 8vn9:A (1.69) BS02 dna N/A GO:0004519 ... Q94702 39141555
    893639 8vn9:A (1.69) BS03 ZN N/A GO:0004519 ... Q94702 39141555
    893640 8vn9:A (1.69) BS04 ZN N/A GO:0004519 ... Q94702 39141555
    893641 8vn9:B (1.69) BS01 dna N/A GO:0004519 ... Q94702 39141555
    893642 8vn9:B (1.69) BS02 dna N/A GO:0004519 ... Q94702 39141555
    893643 8vn9:B (1.69) BS03 ZN N/A GO:0004519 ... Q94702 39141555
    893644 8vn9:B (1.69) BS04 ZN N/A GO:0004519 ... Q94702 39141555
    893645 8vna:A (1.54) BS01 dna N/A GO:0004519 ... Q94702 39141555
    893646 8vna:A (1.54) BS02 dna N/A GO:0004519 ... Q94702 39141555
    893647 8vna:A (1.54) BS03 ZN N/A GO:0004519 ... Q94702 39141555
    893648 8vna:A (1.54) BS04 ZN N/A GO:0004519 ... Q94702 39141555
    893649 8vna:B (1.54) BS01 dna N/A GO:0004519 ... Q94702 39141555
    893650 8vna:B (1.54) BS02 dna N/A GO:0004519 ... Q94702 39141555
    893651 8vna:B (1.54) BS03 ZN N/A GO:0004519 ... Q94702 39141555
    893652 8vna:B (1.54) BS04 ZN N/A GO:0004519 ... Q94702 39141555
    893653 8vnb:A (1.72) BS01 dna N/A GO:0004519 ... Q94702 39141555
    893654 8vnb:A (1.72) BS02 dna N/A GO:0004519 ... Q94702 39141555
    893655 8vnb:A (1.72) BS03 dna N/A GO:0004519 ... Q94702 39141555
    893656 8vnb:A (1.72) BS04 ZN N/A GO:0004519 ... Q94702 39141555
    893657 8vnb:A (1.72) BS05 ZN N/A GO:0004519 ... Q94702 39141555
    893658 8vnb:B (1.72) BS01 dna N/A GO:0004519 ... Q94702 39141555
    893659 8vnb:B (1.72) BS02 dna N/A GO:0004519 ... Q94702 39141555
    893660 8vnb:B (1.72) BS03 dna N/A GO:0004519 ... Q94702 39141555
    893661 8vnb:B (1.72) BS04 ZN N/A GO:0004519 ... Q94702 39141555
    893662 8vnb:B (1.72) BS05 ZN N/A GO:0004519 ... Q94702 39141555
    893663 8vnc:A (1.62) BS01 dna N/A GO:0004519 ... Q94702 39141555
    893664 8vnc:A (1.62) BS02 dna N/A GO:0004519 ... Q94702 39141555
    893665 8vnc:A (1.62) BS03 dna N/A GO:0004519 ... Q94702 39141555
    893666 8vnc:A (1.62) BS04 ZN N/A GO:0004519 ... Q94702 39141555
    893667 8vnc:A (1.62) BS05 ZN N/A GO:0004519 ... Q94702 39141555
    893668 8vnc:B (1.62) BS01 dna N/A GO:0004519 ... Q94702 39141555
    893669 8vnc:B (1.62) BS02 dna N/A GO:0004519 ... Q94702 39141555
    893670 8vnc:B (1.62) BS03 ZN N/A GO:0004519 ... Q94702 39141555
    893671 8vnc:B (1.62) BS04 ZN N/A GO:0004519 ... Q94702 39141555
    893672 8vnd:A (1.6) BS01 dna N/A GO:0004519 ... Q94702 39141555
    893673 8vnd:A (1.6) BS02 dna N/A GO:0004519 ... Q94702 39141555
    893674 8vnd:A (1.6) BS03 dna N/A GO:0004519 ... Q94702 39141555
    893675 8vnd:A (1.6) BS04 ZN N/A GO:0004519 ... Q94702 39141555
    893676 8vnd:A (1.6) BS05 ZN N/A GO:0004519 ... Q94702 39141555
    893677 8vnd:B (1.6) BS01 dna N/A GO:0004519 ... Q94702 39141555
    893678 8vnd:B (1.6) BS02 dna N/A GO:0004519 ... Q94702 39141555
    893679 8vnd:B (1.6) BS03 ZN N/A GO:0004519 ... Q94702 39141555
    893680 8vnd:B (1.6) BS04 ZN N/A GO:0004519 ... Q94702 39141555
    893681 8vne:A (1.57) BS01 dna N/A GO:0004519 ... Q94702 39141555
    893682 8vne:A (1.57) BS02 dna N/A GO:0004519 ... Q94702 39141555
    893683 8vne:A (1.57) BS03 ZN N/A GO:0004519 ... Q94702 39141555
    893684 8vne:A (1.57) BS04 ZN N/A GO:0004519 ... Q94702 39141555
    893685 8vne:B (1.57) BS01 dna N/A GO:0004519 ... Q94702 39141555
    893686 8vne:B (1.57) BS02 dna N/A GO:0004519 ... Q94702 39141555
    893687 8vne:B (1.57) BS03 ZN N/A GO:0004519 ... Q94702 39141555
    893688 8vne:B (1.57) BS04 ZN N/A GO:0004519 ... Q94702 39141555
    893689 8vnf:A (1.5) BS01 dna N/A GO:0004519 ... Q94702 39141555
    893690 8vnf:A (1.5) BS02 dna N/A GO:0004519 ... Q94702 39141555
    893691 8vnf:A (1.5) BS03 ZN N/A GO:0004519 ... Q94702 39141555
    893692 8vnf:A (1.5) BS04 ZN N/A GO:0004519 ... Q94702 39141555
    893693 8vnf:B (1.5) BS01 dna N/A GO:0004519 ... Q94702 39141555
    893694 8vnf:B (1.5) BS02 dna N/A GO:0004519 ... Q94702 39141555
    893695 8vnf:B (1.5) BS03 ZN N/A GO:0004519 ... Q94702 39141555
    893696 8vnf:B (1.5) BS04 ZN N/A GO:0004519 ... Q94702 39141555
    893697 8vng:A (1.6) BS01 dna N/A GO:0004519 ... Q94702 39141555
    893698 8vng:A (1.6) BS02 dna N/A GO:0004519 ... Q94702 39141555
    893699 8vng:A (1.6) BS03 ZN N/A GO:0004519 ... Q94702 39141555
    893700 8vng:A (1.6) BS04 ZN N/A GO:0004519 ... Q94702 39141555
    893701 8vng:B (1.6) BS01 dna N/A GO:0004519 ... Q94702 39141555
    893702 8vng:B (1.6) BS02 dna N/A GO:0004519 ... Q94702 39141555
    893703 8vng:B (1.6) BS03 ZN N/A GO:0004519 ... Q94702 39141555
    893704 8vng:B (1.6) BS04 ZN N/A GO:0004519 ... Q94702 39141555
    893705 8vnh:A (1.76) BS01 dna N/A GO:0004519 ... Q94702 39141555
    893706 8vnh:A (1.76) BS02 dna N/A GO:0004519 ... Q94702 39141555
    893707 8vnh:A (1.76) BS03 ZN N/A GO:0004519 ... Q94702 39141555
    893708 8vnh:A (1.76) BS04 ZN N/A GO:0004519 ... Q94702 39141555
    893709 8vnh:B (1.76) BS01 dna N/A GO:0004519 ... Q94702 39141555
    893710 8vnh:B (1.76) BS02 dna N/A GO:0004519 ... Q94702 39141555
    893711 8vnh:B (1.76) BS03 ZN N/A GO:0004519 ... Q94702 39141555
    893712 8vnh:B (1.76) BS04 ZN N/A GO:0004519 ... Q94702 39141555
    893713 8vnj:A (1.61) BS01 dna N/A GO:0004519 ... Q94702 39141555
    893714 8vnj:A (1.61) BS02 dna N/A GO:0004519 ... Q94702 39141555
    893715 8vnj:A (1.61) BS03 ZN N/A GO:0004519 ... Q94702 39141555
    893716 8vnj:A (1.61) BS04 ZN N/A GO:0004519 ... Q94702 39141555
    893717 8vnj:B (1.61) BS01 dna N/A GO:0004519 ... Q94702 39141555
    893718 8vnj:B (1.61) BS02 dna N/A GO:0004519 ... Q94702 39141555
    893719 8vnj:B (1.61) BS03 ZN N/A GO:0004519 ... Q94702 39141555
    893720 8vnj:B (1.61) BS04 ZN N/A GO:0004519 ... Q94702 39141555
    893721 8vnk:A (1.61) BS01 dna N/A GO:0004519 ... Q94702 39141555
    893722 8vnk:A (1.61) BS02 dna N/A GO:0004519 ... Q94702 39141555
    893723 8vnk:A (1.61) BS03 ZN N/A GO:0004519 ... Q94702 39141555
    893724 8vnk:A (1.61) BS04 ZN N/A GO:0004519 ... Q94702 39141555
    893725 8vnk:B (1.61) BS01 dna N/A GO:0004519 ... Q94702 39141555
    893726 8vnk:B (1.61) BS02 dna N/A GO:0004519 ... Q94702 39141555
    893727 8vnk:B (1.61) BS03 ZN N/A GO:0004519 ... Q94702 39141555
    893728 8vnk:B (1.61) BS04 ZN N/A GO:0004519 ... Q94702 39141555
    893729 8vnl:A (1.64) BS01 dna N/A GO:0004519 ... Q94702 39141555
    893730 8vnl:A (1.64) BS02 dna N/A GO:0004519 ... Q94702 39141555
    893731 8vnl:A (1.64) BS03 dna N/A GO:0004519 ... Q94702 39141555
    893732 8vnl:A (1.64) BS04 ZN N/A GO:0004519 ... Q94702 39141555
    893733 8vnl:A (1.64) BS05 ZN N/A GO:0004519 ... Q94702 39141555
    893734 8vnl:B (1.64) BS01 dna N/A GO:0004519 ... Q94702 39141555
    893735 8vnl:B (1.64) BS02 dna N/A GO:0004519 ... Q94702 39141555
    893736 8vnl:B (1.64) BS03 dna N/A GO:0004519 ... Q94702 39141555
    893737 8vnl:B (1.64) BS04 ZN N/A GO:0004519 ... Q94702 39141555
    893738 8vnl:B (1.64) BS05 ZN N/A GO:0004519 ... Q94702 39141555
    893739 8vnm:A (1.59) BS01 dna N/A GO:0004519 ... Q94702 39141555
    893740 8vnm:A (1.59) BS02 dna N/A GO:0004519 ... Q94702 39141555
    893741 8vnm:A (1.59) BS03 ZN N/A GO:0004519 ... Q94702 39141555
    893742 8vnm:A (1.59) BS04 ZN N/A GO:0004519 ... Q94702 39141555
    893743 8vnm:B (1.59) BS01 dna N/A GO:0004519 ... Q94702 39141555
    893744 8vnm:B (1.59) BS02 dna N/A GO:0004519 ... Q94702 39141555
    893745 8vnm:B (1.59) BS03 ZN N/A GO:0004519 ... Q94702 39141555
    893746 8vnm:B (1.59) BS04 ZN N/A GO:0004519 ... Q94702 39141555
    893747 8vnn:A (1.79) BS01 dna N/A GO:0004519 ... Q94702 39141555
    893748 8vnn:A (1.79) BS02 dna N/A GO:0004519 ... Q94702 39141555
    893749 8vnn:A (1.79) BS03 dna N/A GO:0004519 ... Q94702 39141555
    893750 8vnn:A (1.79) BS04 ZN N/A GO:0004519 ... Q94702 39141555
    893751 8vnn:A (1.79) BS05 ZN N/A GO:0004519 ... Q94702 39141555
    893752 8vnn:B (1.79) BS01 dna N/A GO:0004519 ... Q94702 39141555
    893753 8vnn:B (1.79) BS02 dna N/A GO:0004519 ... Q94702 39141555
    893754 8vnn:B (1.79) BS03 ZN N/A GO:0004519 ... Q94702 39141555
    893755 8vnn:B (1.79) BS04 ZN N/A GO:0004519 ... Q94702 39141555
    893756 8vno:A (1.7) BS01 dna N/A GO:0004519 ... Q94702 39141555
    893757 8vno:A (1.7) BS02 dna N/A GO:0004519 ... Q94702 39141555
    893758 8vno:A (1.7) BS03 dna N/A GO:0004519 ... Q94702 39141555
    893759 8vno:A (1.7) BS04 ZN N/A GO:0004519 ... Q94702 39141555
    893760 8vno:A (1.7) BS05 ZN N/A GO:0004519 ... Q94702 39141555
    893761 8vno:B (1.7) BS01 dna N/A GO:0004519 ... Q94702 39141555
    893762 8vno:B (1.7) BS02 dna N/A GO:0004519 ... Q94702 39141555
    893763 8vno:B (1.7) BS03 ZN N/A GO:0004519 ... Q94702 39141555
    893764 8vno:B (1.7) BS04 ZN N/A GO:0004519 ... Q94702 39141555
    893765 8vnp:A (1.79) BS01 dna N/A GO:0004519 ... Q94702 39141555
    893766 8vnp:A (1.79) BS02 dna N/A GO:0004519 ... Q94702 39141555
    893767 8vnp:A (1.79) BS03 ZN N/A GO:0004519 ... Q94702 39141555
    893768 8vnp:A (1.79) BS04 ZN N/A GO:0004519 ... Q94702 39141555
    893769 8vnp:B (1.79) BS01 dna N/A GO:0004519 ... Q94702 39141555
    893770 8vnp:B (1.79) BS02 dna N/A GO:0004519 ... Q94702 39141555
    893771 8vnp:B (1.79) BS03 ZN N/A GO:0004519 ... Q94702 39141555
    893772 8vnp:B (1.79) BS04 ZN N/A GO:0004519 ... Q94702 39141555
    893773 8vnq:A (1.93) BS01 dna N/A GO:0004519 ... Q94702 39141555
    893774 8vnq:A (1.93) BS02 dna N/A GO:0004519 ... Q94702 39141555
    893775 8vnq:A (1.93) BS03 ZN N/A GO:0004519 ... Q94702 39141555
    893776 8vnq:A (1.93) BS04 ZN N/A GO:0004519 ... Q94702 39141555
    893777 8vnq:B (1.93) BS01 dna N/A GO:0004519 ... Q94702 39141555
    893778 8vnq:B (1.93) BS02 dna N/A GO:0004519 ... Q94702 39141555
    893779 8vnq:B (1.93) BS03 ZN N/A GO:0004519 ... Q94702 39141555
    893780 8vnq:B (1.93) BS04 ZN N/A GO:0004519 ... Q94702 39141555
    893781 8vnr:A (1.98) BS01 dna N/A GO:0004519 ... Q94702 39141555
    893782 8vnr:A (1.98) BS02 dna N/A GO:0004519 ... Q94702 39141555
    893783 8vnr:A (1.98) BS03 ZN N/A GO:0004519 ... Q94702 39141555
    893784 8vnr:A (1.98) BS04 ZN N/A GO:0004519 ... Q94702 39141555
    893785 8vnr:B (1.98) BS01 dna N/A GO:0004519 ... Q94702 39141555
    893786 8vnr:B (1.98) BS02 dna N/A GO:0004519 ... Q94702 39141555
    893787 8vnr:B (1.98) BS03 ZN N/A GO:0004519 ... Q94702 39141555
    893788 8vnr:B (1.98) BS04 ZN N/A GO:0004519 ... Q94702 39141555
    893789 8vns:A (2.11) BS01 dna N/A GO:0004519 ... Q94702 39141555
    893790 8vns:A (2.11) BS02 dna N/A GO:0004519 ... Q94702 39141555
    893791 8vns:A (2.11) BS03 ZN N/A GO:0004519 ... Q94702 39141555
    893792 8vns:A (2.11) BS04 ZN N/A GO:0004519 ... Q94702 39141555
    893793 8vns:B (2.11) BS01 dna N/A GO:0004519 ... Q94702 39141555
    893794 8vns:B (2.11) BS02 dna N/A GO:0004519 ... Q94702 39141555
    893795 8vns:B (2.11) BS03 ZN N/A GO:0004519 ... Q94702 39141555
    893796 8vns:B (2.11) BS04 ZN N/A GO:0004519 ... Q94702 39141555
    893797 8vnt:A (1.62) BS01 dna N/A GO:0004519 ... Q94702 39141555
    893798 8vnt:A (1.62) BS02 dna N/A GO:0004519 ... Q94702 39141555
    893799 8vnt:A (1.62) BS03 dna N/A GO:0004519 ... Q94702 39141555
    893800 8vnt:A (1.62) BS04 ZN N/A GO:0004519 ... Q94702 39141555

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).