SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    894001 8vq2:B (3.829) BS03 A1AC6 N/A GO:0000166 ... I7GY94 39140041
    894002 8vq3:A (1.84) BS01 A1AC4 2.7.11.22 GO:0000082 ... P24941 39294320
    894003 8vq3:B (1.84) BS01 A1AC4 ? N/A P24864 39294320
    894004 8vq4:A (1.9) BS01 A1AC5 2.7.11.22 GO:0000082 ... P24941 39294320
    894005 8vq4:B (1.9) BS01 A1AC5 ? N/A P24864 39294320
    894006 8vql:A (2.29) BS01 A1ADD ? GO:0019031 ... P03452 38753503
    894007 8vql:B (2.29) BS01 A1ADD ? GO:0019031 ... P03452 38753503
    894008 8vqm:A (2.21) BS01 A1ADU ? GO:0019031 ... P03452 38753503
    894009 8vqm:B (2.21) BS01 A1ADU ? GO:0019031 ... P03452 38753503
    894010 8vqn:A (2.21) BS01 A1ADV ? GO:0019031 ... P03452 38753503
    894011 8vqn:B (2.21) BS01 A1ADV ? GO:0019031 ... P03452 38753503
    894012 8vqq:A (2.05) BS01 A1ADC ? GO:0019031 ... P03452 38753503
    894013 8vqq:B (2.05) BS01 A1ADC ? GO:0019031 ... P03452 38753503
    894014 8vqr:A (2.565) BS01 FUC 3.4.-.-
    3.4.17.-
    3.4.17.23
    N/A B4XEP4
    Q9BYF1
    38709834
    894015 8vqr:A (2.565) BS02 BMA 3.4.-.-
    3.4.17.-
    3.4.17.23
    N/A B4XEP4
    Q9BYF1
    38709834
    894016 8vqr:A (2.565) BS03 FUC 3.4.-.-
    3.4.17.-
    3.4.17.23
    N/A B4XEP4
    Q9BYF1
    38709834
    894017 8vqr:A (2.565) BS04 ZN 3.4.-.-
    3.4.17.-
    3.4.17.23
    N/A B4XEP4
    Q9BYF1
    38709834
    894018 8vqr:B (2.565) BS01 MAN 3.4.-.-
    3.4.17.-
    3.4.17.23
    N/A B4XEP4
    Q9BYF1
    38709834
    894019 8vqr:B (2.565) BS02 FUC 3.4.-.-
    3.4.17.-
    3.4.17.23
    N/A B4XEP4
    Q9BYF1
    38709834
    894020 8vqr:B (2.565) BS03 ZN 3.4.-.-
    3.4.17.-
    3.4.17.23
    N/A B4XEP4
    Q9BYF1
    38709834
    894021 8vqw:C (2.2) BS01 COA 1.2.1.8 GO:0000166 ... A0A0H3FPU4 N/A
    894022 8vqw:D (2.2) BS01 COA 1.2.1.8 GO:0000166 ... A0A0H3FPU4 N/A
    894023 8vqx:A (1.35) BS01 A1ADM N/A GO:0008233 ... P0DTD1 38518735
    894024 8vqy:A (2.82) BS01 ABU N/A GO:0004888 ... P47870 38898000
    894025 8vqy:A (2.82) BS02 A1ADG N/A GO:0004888 ... P47870 38898000
    894026 8vqy:B (2.82) BS01 ABU N/A GO:0004888 ... P14867 38898000
    894027 8vqy:B (2.82) BS02 A1ADG N/A GO:0004888 ... P14867 38898000
    894028 8vqy:B (2.82) BS03 Q3G N/A GO:0004888 ... P14867 38898000
    894029 8vqy:C (2.82) BS01 ABU N/A GO:0004888 ... P47870 38898000
    894030 8vqy:C (2.82) BS02 A1ADG N/A GO:0004888 ... P47870 38898000
    894031 8vqy:C (2.82) BS03 Q3G N/A GO:0004888 ... P47870 38898000
    894032 8vqy:D (2.82) BS01 ABU N/A GO:0004888 ... P14867 38898000
    894033 8vqy:D (2.82) BS02 Q3G N/A GO:0004888 ... P14867 38898000
    894034 8vqy:D (2.82) BS03 A1ADG N/A GO:0004888 ... P14867 38898000
    894035 8vqy:E (2.82) BS01 MAN N/A GO:0004888 ... P18507 38898000
    894036 8vqy:E (2.82) BS02 MAN N/A GO:0004888 ... P18507 38898000
    894037 8vqy:E (2.82) BS03 A1ADG N/A GO:0004888 ... P18507 38898000
    894038 8vqz:A (2.05) BS01 C5P 1.2.1.8 GO:0000166 ... A0A0H3FPU4 N/A
    894039 8vqz:B (2.05) BS01 C5P 1.2.1.8 GO:0000166 ... A0A0H3FPU4 N/A
    894040 8vqz:C (2.05) BS01 C5P 1.2.1.8 GO:0000166 ... A0A0H3FPU4 N/A
    894041 8vqz:D (2.05) BS01 C5P 1.2.1.8 GO:0000166 ... A0A0H3FPU4 N/A
    894042 8vr0:A (2.25) BS01 5GP 1.2.1.8 GO:0000166 ... A0A0H3FPU4 N/A
    894043 8vr0:B (2.25) BS01 5GP 1.2.1.8 GO:0000166 ... A0A0H3FPU4 N/A
    894044 8vr0:C (2.25) BS01 5GP 1.2.1.8 GO:0000166 ... A0A0H3FPU4 N/A
    894045 8vr1:A (2.05) BS01 CTP 1.2.1.8 GO:0000166 ... A0A0H3FPU4 N/A
    894046 8vr1:B (2.05) BS01 CTP 1.2.1.8 GO:0000166 ... A0A0H3FPU4 N/A
    894047 8vr1:C (2.05) BS01 CTP 1.2.1.8 GO:0000166 ... A0A0H3FPU4 N/A
    894048 8vr1:D (2.05) BS01 CTP 1.2.1.8 GO:0000166 ... A0A0H3FPU4 N/A
    894049 8vr2:A (1.8) BS01 NAD ? GO:0000166 ... Q1QD53 N/A
    894050 8vr2:A (1.8) BS02 UDP ? GO:0000166 ... Q1QD53 N/A
    894051 8vr2:B (1.8) BS01 NAD ? GO:0000166 ... Q1QD53 N/A
    894052 8vr2:B (1.8) BS02 UDP ? GO:0000166 ... Q1QD53 N/A
    894053 8vr2:C (1.8) BS01 NAD ? GO:0000166 ... Q1QD53 N/A
    894054 8vr2:C (1.8) BS02 UDP ? GO:0000166 ... Q1QD53 N/A
    894055 8vr2:D (1.8) BS01 NAD ? GO:0000166 ... Q1QD53 N/A
    894056 8vr2:D (1.8) BS02 UDP ? GO:0000166 ... Q1QD53 N/A
    894057 8vr3:B (2.0) BS01 A1ADI ? GO:0000271 ... Q1QD52 N/A
    894058 8vr4:2 (2.8) BS01 rna N/A N/A A0QSG7 39913204
    894059 8vr4:2 (2.8) BS02 rna N/A N/A A0QSG7 39913204
    894060 8vr4:4 (2.8) BS01 rna N/A N/A A0QVY1 39913204
    894061 8vr4:4 (2.8) BS02 ERY N/A N/A A0QVY1 39913204
    894062 8vr4:C (2.8) BS01 rna N/A N/A A0QSD4 39913204
    894063 8vr4:D (2.8) BS01 rna N/A N/A A0QSD1 39913204
    894064 8vr4:E (2.8) BS01 rna N/A N/A A0QSD2 39913204
    894065 8vr4:F (2.8) BS01 rna N/A N/A A0QSG1 39913204
    894066 8vr4:F (2.8) BS02 rna N/A N/A A0QSG1 39913204
    894067 8vr4:G (2.8) BS01 rna N/A N/A A0QSG4 39913204
    894068 8vr4:H (2.8) BS01 rna N/A N/A A0R7F6 39913204
    894069 8vr4:J (2.8) BS01 rna N/A N/A A0QS45 39913204
    894070 8vr4:K (2.8) BS01 rna N/A N/A A0QSP8 39913204
    894071 8vr4:L (2.8) BS01 rna N/A N/A A0QSF9 39913204
    894072 8vr4:M (2.8) BS01 rna N/A N/A A0QSG8 39913204
    894073 8vr4:N (2.8) BS01 rna N/A N/A A0QSD8 39913204
    894074 8vr4:O (2.8) BS01 rna N/A N/A A0QSL9 39913204
    894075 8vr4:P (2.8) BS01 rna N/A N/A I7FGD9 39913204
    894076 8vr4:P (2.8) BS02 rna N/A N/A I7FGD9 39913204
    894077 8vr4:Q (2.8) BS01 rna N/A N/A A0QV42 39913204
    894078 8vr4:R (2.8) BS01 rna N/A N/A A0QYU6 39913204
    894079 8vr4:S (2.8) BS01 rna N/A N/A A0R151 39913204
    894080 8vr4:T (2.8) BS01 rna N/A N/A A0QSD6 39913204
    894081 8vr4:U (2.8) BS01 rna N/A N/A A0QSD3 39913204
    894082 8vr4:V (2.8) BS01 rna N/A N/A A0QSG0 39913204
    894083 8vr4:W (2.8) BS01 rna N/A N/A A0R3D2 39913204
    894084 8vr4:X (2.8) BS01 rna N/A N/A A0R150 39913204
    894085 8vr4:Y (2.8) BS01 rna N/A N/A I7FJ52 39913204
    894086 8vr4:Z (2.8) BS01 rna N/A N/A A0QSD9 39913204
    894087 8vr4:b (2.8) BS01 rna N/A N/A A0R3I9 39913204
    894088 8vr4:c (2.8) BS01 rna N/A N/A A0QS39 39913204
    894089 8vr4:d (2.8) BS01 rna N/A N/A A0R7K0 39913204
    894090 8vr4:e (2.8) BS01 rna N/A N/A A0QYU7 39913204
    894091 8vr4:f (2.8) BS01 rna N/A N/A A0QSL4 39913204
    894092 8vr4:g (2.8) BS01 rna N/A N/A A0R215 39913204
    894093 8vr5:A (2.2) BS01 PMP ? GO:0000271 ... Q1QD52 N/A
    894094 8vr5:A (2.2) BS02 A1ADI ? GO:0000271 ... Q1QD52 N/A
    894095 8vr5:B (2.2) BS01 PDG ? GO:0000271 ... Q1QD52 N/A
    894096 8vr5:B (2.2) BS02 A1ADI ? GO:0000271 ... Q1QD52 N/A
    894097 8vr5:C (2.2) BS01 PDG ? GO:0000271 ... Q1QD52 N/A
    894098 8vr5:C (2.2) BS02 PDG ? GO:0000271 ... Q1QD52 N/A
    894099 8vr5:D (2.2) BS01 PDG ? GO:0000271 ... Q1QD52 N/A
    894100 8vr5:D (2.2) BS02 PDG ? GO:0000271 ... Q1QD52 N/A
    894101 8vr6:A (1.9) BS01 5NG ? GO:0016740 ... Q1QD51 N/A
    894102 8vr7:A (1.9) BS01 ACO ? GO:0016740 ... Q1QD51 N/A
    894103 8vr7:A (1.9) BS02 ACO ? GO:0016740 ... Q1QD51 N/A
    894104 8vr7:B (1.9) BS01 ACO ? GO:0016740 ... Q1QD51 N/A
    894105 8vr7:B (1.9) BS02 COA ? GO:0016740 ... Q1QD51 N/A
    894106 8vr7:B (1.9) BS03 EP1 ? GO:0016740 ... Q1QD51 N/A
    894107 8vr7:B (1.9) BS04 PAP ? GO:0016740 ... Q1QD51 N/A
    894108 8vr7:C (1.9) BS01 COA ? GO:0016740 ... Q1QD51 N/A
    894109 8vr7:C (1.9) BS02 ACO ? GO:0016740 ... Q1QD51 N/A
    894110 8vr7:D (1.9) BS01 ACO ? GO:0016740 ... Q1QD51 N/A
    894111 8vr7:D (1.9) BS02 COA ? GO:0016740 ... Q1QD51 N/A
    894112 8vr7:E (1.9) BS01 ACO ? GO:0016740 ... Q1QD51 N/A
    894113 8vr7:E (1.9) BS02 ACO ? GO:0016740 ... Q1QD51 N/A
    894114 8vr7:E (1.9) BS03 PAP ? GO:0016740 ... Q1QD51 N/A
    894115 8vr7:F (1.9) BS01 ACO ? GO:0016740 ... Q1QD51 N/A
    894116 8vr7:F (1.9) BS02 COA ? GO:0016740 ... Q1QD51 N/A
    894117 8vr8:2 (3.25) BS01 rna N/A N/A A0QSG7 39913204
    894118 8vr8:2 (3.25) BS02 rna N/A N/A A0QSG7 39913204
    894119 8vr8:4 (3.25) BS01 rna N/A N/A A0QVY1 39913204
    894120 8vr8:C (3.25) BS01 rna N/A N/A A0QSD4 39913204
    894121 8vr8:D (3.25) BS01 rna N/A N/A A0QSD1 39913204
    894122 8vr8:E (3.25) BS01 rna N/A N/A A0QSD2 39913204
    894123 8vr8:G (3.25) BS01 rna N/A N/A A0QSG4 39913204
    894124 8vr8:H (3.25) BS01 rna N/A N/A A0R7F6 39913204
    894125 8vr8:I (3.25) BS01 rna N/A N/A A0QS62 39913204
    894126 8vr8:K (3.25) BS01 rna N/A N/A A0QSP8 39913204
    894127 8vr8:L (3.25) BS01 rna N/A N/A A0QSF9 39913204
    894128 8vr8:M (3.25) BS01 rna N/A N/A A0QSG8 39913204
    894129 8vr8:N (3.25) BS01 rna N/A N/A A0QSD8 39913204
    894130 8vr8:O (3.25) BS01 rna N/A N/A A0QSL9 39913204
    894131 8vr8:Q (3.25) BS01 rna N/A N/A A0QV42 39913204
    894132 8vr8:R (3.25) BS01 rna N/A N/A A0QYU6 39913204
    894133 8vr8:S (3.25) BS01 rna N/A N/A A0R151 39913204
    894134 8vr8:T (3.25) BS01 rna N/A N/A A0QSD6 39913204
    894135 8vr8:U (3.25) BS01 rna N/A N/A A0QSD3 39913204
    894136 8vr8:V (3.25) BS01 rna N/A N/A A0QSG0 39913204
    894137 8vr8:W (3.25) BS01 rna N/A N/A A0R3D2 39913204
    894138 8vr8:X (3.25) BS01 rna N/A N/A A0R150 39913204
    894139 8vr8:Y (3.25) BS01 rna N/A N/A I7FJ52 39913204
    894140 8vr8:Z (3.25) BS01 rna N/A N/A A0QSD9 39913204
    894141 8vr8:b (3.25) BS01 rna N/A N/A A0R3I9 39913204
    894142 8vr8:c (3.25) BS01 rna N/A N/A A0QS39 39913204
    894143 8vr8:d (3.25) BS01 rna N/A N/A A0R7K0 39913204
    894144 8vr8:e (3.25) BS01 rna N/A N/A A0QYU7 39913204
    894145 8vr8:f (3.25) BS01 rna N/A N/A A0QSL4 39913204
    894146 8vr9:A (3.06) BS01 peptide N/A N/A P04439 38781214
    894147 8vr9:A (3.06) BS02 MOV N/A N/A P04439 38781214
    894148 8vr9:D (3.06) BS01 MOV N/A N/A N/A 38781214
    894149 8vr9:E (3.06) BS01 MOV N/A N/A N/A 38781214
    894150 8vra:A (3.12) BS01 peptide N/A N/A P04439 38781214
    894151 8vra:A (3.12) BS02 MOV N/A N/A P04439 38781214
    894152 8vra:D (3.12) BS01 MOV N/A N/A N/A 38781214
    894153 8vra:E (3.12) BS01 MOV N/A N/A N/A 38781214
    894154 8vrb:A (3.25) BS01 peptide N/A N/A A0A3G8GE10 38781214
    894155 8vrb:D (3.25) BS01 MOV N/A N/A N/A 38781214
    894156 8vrb:E (3.25) BS01 MOV N/A N/A N/A 38781214
    894157 8vre:A (1.83) BS01 NAI N/A GO:0004735 ... P32322 39133178
    894158 8vre:A (1.83) BS02 FPK N/A GO:0004735 ... P32322 39133178
    894159 8vre:A (1.83) BS03 FPK N/A GO:0004735 ... P32322 39133178
    894160 8vre:B (1.83) BS01 FPK N/A GO:0004735 ... P32322 39133178
    894161 8vre:B (1.83) BS02 NAI N/A GO:0004735 ... P32322 39133178
    894162 8vre:B (1.83) BS03 FPK N/A GO:0004735 ... P32322 39133178
    894163 8vre:C (1.83) BS01 NAI N/A GO:0004735 ... P32322 39133178
    894164 8vre:C (1.83) BS02 FPK N/A GO:0004735 ... P32322 39133178
    894165 8vre:C (1.83) BS03 FPK N/A GO:0004735 ... P32322 39133178
    894166 8vre:D (1.83) BS01 NAI N/A GO:0004735 ... P32322 39133178
    894167 8vre:D (1.83) BS02 FPK N/A GO:0004735 ... P32322 39133178
    894168 8vre:E (1.83) BS01 FPK N/A GO:0004735 ... P32322 39133178
    894169 8vrl:2 (3.33) BS01 rna N/A N/A A0QSG7 39913204
    894170 8vrl:2 (3.33) BS02 rna N/A N/A A0QSG7 39913204
    894171 8vrl:4 (3.33) BS01 rna N/A N/A A0QVY1 39913204
    894172 8vrl:4 (3.33) BS02 CLM N/A N/A A0QVY1 39913204
    894173 8vrl:C (3.33) BS01 rna N/A N/A A0QSD4 39913204
    894174 8vrl:D (3.33) BS01 rna N/A N/A A0QSD1 39913204
    894175 8vrl:E (3.33) BS01 rna N/A N/A A0QSD2 39913204
    894176 8vrl:G (3.33) BS01 rna N/A N/A A0QSG4 39913204
    894177 8vrl:H (3.33) BS01 rna N/A N/A A0R7F6 39913204
    894178 8vrl:K (3.33) BS01 rna N/A N/A A0QSP8 39913204
    894179 8vrl:L (3.33) BS01 rna N/A N/A A0QSF9 39913204
    894180 8vrl:M (3.33) BS01 rna N/A N/A A0QSG8 39913204
    894181 8vrl:N (3.33) BS01 rna N/A N/A A0QSD8 39913204
    894182 8vrl:O (3.33) BS01 rna N/A N/A A0QSL9 39913204
    894183 8vrl:P (3.33) BS01 rna N/A N/A I7FGD9 39913204
    894184 8vrl:P (3.33) BS02 rna N/A N/A I7FGD9 39913204
    894185 8vrl:Q (3.33) BS01 rna N/A N/A A0QV42 39913204
    894186 8vrl:R (3.33) BS01 rna N/A N/A A0QYU6 39913204
    894187 8vrl:S (3.33) BS01 rna N/A N/A A0R151 39913204
    894188 8vrl:T (3.33) BS01 rna N/A N/A A0QSD6 39913204
    894189 8vrl:U (3.33) BS01 rna N/A N/A A0QSD3 39913204
    894190 8vrl:V (3.33) BS01 rna N/A N/A A0QSG0 39913204
    894191 8vrl:W (3.33) BS01 rna N/A N/A A0R3D2 39913204
    894192 8vrl:X (3.33) BS01 rna N/A N/A A0R150 39913204
    894193 8vrl:Y (3.33) BS01 rna N/A N/A I7FJ52 39913204
    894194 8vrl:Z (3.33) BS01 rna N/A N/A A0QSD9 39913204
    894195 8vrl:b (3.33) BS01 rna N/A N/A A0R3I9 39913204
    894196 8vrl:c (3.33) BS01 rna N/A N/A A0QS39 39913204
    894197 8vrl:d (3.33) BS01 rna N/A N/A A0R7K0 39913204
    894198 8vrl:e (3.33) BS01 rna N/A N/A A0QYU7 39913204
    894199 8vrl:f (3.33) BS01 rna N/A N/A A0QSL4 39913204
    894200 8vrl:g (3.33) BS01 rna N/A N/A A0R215 39913204

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).