SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    894201 8vrn:A (2.57) BS01 ABU N/A GO:0004888 ... P47870 38898000
    894202 8vrn:A (2.57) BS02 A1ADN N/A GO:0004888 ... P47870 38898000
    894203 8vrn:B (2.57) BS01 ABU N/A GO:0004888 ... P14867 38898000
    894204 8vrn:B (2.57) BS02 A1ADN N/A GO:0004888 ... P14867 38898000
    894205 8vrn:B (2.57) BS03 Q3G N/A GO:0004888 ... P14867 38898000
    894206 8vrn:C (2.57) BS01 ABU N/A GO:0004888 ... P47870 38898000
    894207 8vrn:C (2.57) BS02 A1ADN N/A GO:0004888 ... P47870 38898000
    894208 8vrn:C (2.57) BS03 Q3G N/A GO:0004888 ... P47870 38898000
    894209 8vrn:D (2.57) BS01 MAN N/A GO:0004888 ... P14867 38898000
    894210 8vrn:D (2.57) BS02 ABU N/A GO:0004888 ... P14867 38898000
    894211 8vrn:D (2.57) BS03 A1ADN N/A GO:0004888 ... P14867 38898000
    894212 8vrn:D (2.57) BS04 Q3G N/A GO:0004888 ... P14867 38898000
    894213 8vrn:E (2.57) BS01 MAN N/A GO:0004888 ... P18507 38898000
    894214 8vrn:E (2.57) BS02 MAN N/A GO:0004888 ... P18507 38898000
    894215 8vrt:B (3.42) BS01 IHP N/A N/A Q9NVX7 N/A
    894216 8vrt:C (3.42) BS01 ZN N/A GO:0000118 ... Q13547 N/A
    894217 8vrt:C (3.42) BS02 IHP N/A GO:0000118 ... Q13547 N/A
    894218 8vrt:D (3.42) BS01 IHP N/A N/A Q9UKL0 N/A
    894219 8vrv:A (1.61) BS01 FUC N/A N/A A0A168DBN0 38953655
    894220 8vrx:B (2.04) BS01 MG N/A N/A N/A N/A
    894221 8vs0:A (2.46) BS01 A1ACT N/A N/A P53779 N/A
    894222 8vs6:A (2.73) BS01 peptide N/A GO:0001525 ... P06756 39288764
    894223 8vs6:A (2.73) BS02 CA N/A GO:0001525 ... P06756 39288764
    894224 8vs6:A (2.73) BS03 CA N/A GO:0001525 ... P06756 39288764
    894225 8vs6:A (2.73) BS04 CA N/A GO:0001525 ... P06756 39288764
    894226 8vs6:A (2.73) BS05 CA N/A GO:0001525 ... P06756 39288764
    894227 8vs6:B (2.73) BS01 peptide N/A N/A P26012 39288764
    894228 8vs6:B (2.73) BS02 CA N/A N/A P26012 39288764
    894229 8vs6:B (2.73) BS03 MG N/A N/A P26012 39288764
    894230 8vs9:L02 (3.9) BS01 rna ? GO:0000027 ... P60422 38500588
    894231 8vs9:L03 (3.9) BS01 rna ? GO:0000027 ... P60438 38500588
    894232 8vs9:L04 (3.9) BS01 rna ? GO:0001070 ... P60723 38500588
    894233 8vs9:L05 (3.9) BS01 rna ? GO:0000027 ... P62399 38500588
    894234 8vs9:L05 (3.9) BS02 rna ? GO:0000027 ... P62399 38500588
    894235 8vs9:L05 (3.9) BS03 rna ? GO:0000027 ... P62399 38500588
    894236 8vs9:L06 (3.9) BS01 rna ? GO:0000027 ... P0AG55 38500588
    894237 8vs9:L09 (3.9) BS01 rna ? GO:0002181 ... P0A7R1 38500588
    894238 8vs9:L1 (3.9) BS01 rna ? GO:0000027 ... P0A7L0 38500588
    894239 8vs9:L1 (3.9) BS02 rna ? GO:0000027 ... P0A7L0 38500588
    894240 8vs9:L10 (3.9) BS01 rna ? GO:0002181 ... P0A7J3 38500588
    894241 8vs9:L11 (3.9) BS01 rna ? GO:0000027 ... P0A7J7 38500588
    894242 8vs9:L13 (3.9) BS01 rna N/A GO:0002181 ... P0AA10 38500588
    894243 8vs9:L14 (3.9) BS01 rna ? GO:0002181 ... P0ADY3 38500588
    894244 8vs9:L14 (3.9) BS02 rna ? GO:0002181 ... P0ADY3 38500588
    894245 8vs9:L15 (3.9) BS01 rna ? GO:0002181 ... P02413 38500588
    894246 8vs9:L16 (3.9) BS01 rna ? GO:0000027 ... P0ADY7 38500588
    894247 8vs9:L16 (3.9) BS02 rna ? GO:0000027 ... P0ADY7 38500588
    894248 8vs9:L16 (3.9) BS03 rna ? GO:0000027 ... P0ADY7 38500588
    894249 8vs9:L17 (3.9) BS01 rna ? GO:0000027 ... P0AG44 38500588
    894250 8vs9:L18 (3.9) BS01 rna N/A GO:0002181 ... P0C018 38500588
    894251 8vs9:L18 (3.9) BS02 rna N/A GO:0002181 ... P0C018 38500588
    894252 8vs9:L19 (3.9) BS01 rna N/A GO:0000027 ... P0A7K6 38500588
    894253 8vs9:L19 (3.9) BS02 rna N/A GO:0000027 ... P0A7K6 38500588
    894254 8vs9:L20 (3.9) BS01 rna ? GO:0000027 ... P0A7L3 38500588
    894255 8vs9:L21 (3.9) BS01 rna ? GO:0002181 ... P0AG48 38500588
    894256 8vs9:L22 (3.9) BS01 rna ? GO:0002181 ... P61175 38500588
    894257 8vs9:L23 (3.9) BS01 rna N/A GO:0000027 ... P0ADZ0 38500588
    894258 8vs9:L24 (3.9) BS01 rna N/A GO:0000027 ... P60624 38500588
    894259 8vs9:L25 (3.9) BS01 rna N/A GO:0000027 ... P68919 38500588
    894260 8vs9:L25 (3.9) BS02 rna N/A GO:0000027 ... P68919 38500588
    894261 8vs9:L27 (3.9) BS01 rna ? GO:0000027 ... P0A7L8 38500588
    894262 8vs9:L27 (3.9) BS02 rna ? GO:0000027 ... P0A7L8 38500588
    894263 8vs9:L28 (3.9) BS01 rna ? GO:0000027 ... P0A7M2 38500588
    894264 8vs9:L29 (3.9) BS01 rna N/A GO:0000027 ... P0A7M6 38500588
    894265 8vs9:L30 (3.9) BS01 rna ? GO:0000027 ... P0AG51 38500588
    894266 8vs9:L30 (3.9) BS02 rna ? GO:0000027 ... P0AG51 38500588
    894267 8vs9:L31 (3.9) BS01 rna ? GO:0003735 ... P0A7M9 38500588
    894268 8vs9:L32 (3.9) BS01 rna N/A GO:0000027 ... P0A7N4 38500588
    894269 8vs9:L33 (3.9) BS01 rna ? GO:0000027 ... P0A7N9 38500588
    894270 8vs9:L34 (3.9) BS01 rna ? GO:0002181 ... P0A7P5 38500588
    894271 8vs9:L35 (3.9) BS01 rna ? GO:0002181 ... P0A7Q1 38500588
    894272 8vs9:L36 (3.9) BS01 rna ? GO:0002181 ... P0A7Q6 38500588
    894273 8vs9:S02 (3.9) BS01 rna ? GO:0000028 ... P0A7V0 38500588
    894274 8vs9:S02 (3.9) BS02 rna ? GO:0000028 ... P0A7V0 38500588
    894275 8vs9:S03 (3.9) BS01 rna ? GO:0000028 ... P0A7V3 38500588
    894276 8vs9:S03 (3.9) BS02 rna ? GO:0000028 ... P0A7V3 38500588
    894277 8vs9:S04 (3.9) BS01 rna ? GO:0000028 ... P0A7V8 38500588
    894278 8vs9:S05 (3.9) BS01 rna ? GO:0000028 ... P0A7W1 38500588
    894279 8vs9:S05 (3.9) BS02 rna ? GO:0000028 ... P0A7W1 38500588
    894280 8vs9:S06 (3.9) BS01 rna ? GO:0002181 ... P02358 38500588
    894281 8vs9:S07 (3.9) BS01 rna ? GO:0000028 ... P02359 38500588
    894282 8vs9:S07 (3.9) BS02 rna ? GO:0000028 ... P02359 38500588
    894283 8vs9:S08 (3.9) BS01 rna N/A GO:0000028 ... P0A7W7 38500588
    894284 8vs9:S09 (3.9) BS01 rna ? GO:0000049 ... P0A7X3 38500588
    894285 8vs9:S10 (3.9) BS01 rna N/A GO:0000049 ... P0A7R5 38500588
    894286 8vs9:S11 (3.9) BS01 rna ? GO:0002181 ... P0A7R9 38500588
    894287 8vs9:S12 (3.9) BS01 rna ? GO:0000049 ... P0A7S3 38500588
    894288 8vs9:S13 (3.9) BS01 rna ? GO:0000049 ... P0A7S9 38500588
    894289 8vs9:S13 (3.9) BS02 rna ? GO:0000049 ... P0A7S9 38500588
    894290 8vs9:S14 (3.9) BS01 rna ? GO:0000028 ... P0AG59 38500588
    894291 8vs9:S15 (3.9) BS01 rna ? GO:0000028 ... P0ADZ4 38500588
    894292 8vs9:S15 (3.9) BS02 rna ? GO:0000028 ... P0ADZ4 38500588
    894293 8vs9:S16 (3.9) BS01 rna ? GO:0000028 ... P0A7T3 38500588
    894294 8vs9:S17 (3.9) BS01 rna ? GO:0000028 ... P0AG63 38500588
    894295 8vs9:S18 (3.9) BS01 rna ? GO:0002181 ... P0A7T7 38500588
    894296 8vs9:S19 (3.9) BS01 rna N/A GO:0000028 ... P0A7U3 38500588
    894297 8vs9:S19 (3.9) BS02 rna N/A GO:0000028 ... P0A7U3 38500588
    894298 8vs9:S20 (3.9) BS01 rna ? GO:0000028 ... P0A7U7 38500588
    894299 8vs9:S21 (3.9) BS01 rna ? GO:0000028 ... P68679 38500588
    894300 8vs9:SMPB (3.9) BS01 rna ? GO:0003723 ... P0A832 38500588
    894301 8vs9:SMPB (3.9) BS02 rna ? GO:0003723 ... P0A832 38500588
    894302 8vs9:SMPB (3.9) BS03 rna ? GO:0003723 ... P0A832 38500588
    894303 8vs9:SMPB (3.9) BS04 rna ? GO:0003723 ... P0A832 38500588
    894304 8vsa:L02 (3.7) BS01 rna ? GO:0000027 ... P60422 38500588
    894305 8vsa:L02 (3.7) BS02 rna ? GO:0000027 ... P60422 38500588
    894306 8vsa:L03 (3.7) BS01 rna ? GO:0000027 ... P60438 38500588
    894307 8vsa:L04 (3.7) BS01 rna ? GO:0001070 ... P60723 38500588
    894308 8vsa:L05 (3.7) BS01 rna ? GO:0000027 ... P62399 38500588
    894309 8vsa:L05 (3.7) BS02 rna ? GO:0000027 ... P62399 38500588
    894310 8vsa:L05 (3.7) BS03 rna ? GO:0000027 ... P62399 38500588
    894311 8vsa:L06 (3.7) BS01 rna ? GO:0000027 ... P0AG55 38500588
    894312 8vsa:L09 (3.7) BS01 rna ? GO:0002181 ... P0A7R1 38500588
    894313 8vsa:L1 (3.7) BS01 rna ? GO:0000027 ... P0A7L0 38500588
    894314 8vsa:L10 (3.7) BS01 rna ? GO:0002181 ... P0A7J3 38500588
    894315 8vsa:L11 (3.7) BS01 rna ? GO:0000027 ... P0A7J7 38500588
    894316 8vsa:L13 (3.7) BS01 rna N/A GO:0002181 ... P0AA10 38500588
    894317 8vsa:L14 (3.7) BS01 rna ? GO:0002181 ... P0ADY3 38500588
    894318 8vsa:L14 (3.7) BS02 rna ? GO:0002181 ... P0ADY3 38500588
    894319 8vsa:L15 (3.7) BS01 rna ? GO:0002181 ... P02413 38500588
    894320 8vsa:L16 (3.7) BS01 rna ? GO:0000027 ... P0ADY7 38500588
    894321 8vsa:L16 (3.7) BS02 rna ? GO:0000027 ... P0ADY7 38500588
    894322 8vsa:L16 (3.7) BS03 rna ? GO:0000027 ... P0ADY7 38500588
    894323 8vsa:L17 (3.7) BS01 rna ? GO:0000027 ... P0AG44 38500588
    894324 8vsa:L18 (3.7) BS01 rna N/A GO:0002181 ... P0C018 38500588
    894325 8vsa:L18 (3.7) BS02 rna N/A GO:0002181 ... P0C018 38500588
    894326 8vsa:L19 (3.7) BS01 rna N/A GO:0000027 ... P0A7K6 38500588
    894327 8vsa:L19 (3.7) BS02 rna N/A GO:0000027 ... P0A7K6 38500588
    894328 8vsa:L20 (3.7) BS01 rna ? GO:0000027 ... P0A7L3 38500588
    894329 8vsa:L21 (3.7) BS01 rna ? GO:0002181 ... P0AG48 38500588
    894330 8vsa:L22 (3.7) BS01 rna ? GO:0002181 ... P61175 38500588
    894331 8vsa:L23 (3.7) BS01 rna N/A GO:0000027 ... P0ADZ0 38500588
    894332 8vsa:L24 (3.7) BS01 rna N/A GO:0000027 ... P60624 38500588
    894333 8vsa:L25 (3.7) BS01 rna N/A GO:0000027 ... P68919 38500588
    894334 8vsa:L27 (3.7) BS01 rna ? GO:0000027 ... P0A7L8 38500588
    894335 8vsa:L27 (3.7) BS02 rna ? GO:0000027 ... P0A7L8 38500588
    894336 8vsa:L28 (3.7) BS01 rna ? GO:0000027 ... P0A7M2 38500588
    894337 8vsa:L29 (3.7) BS01 rna N/A GO:0000027 ... P0A7M6 38500588
    894338 8vsa:L30 (3.7) BS01 rna ? GO:0000027 ... P0AG51 38500588
    894339 8vsa:L30 (3.7) BS02 rna ? GO:0000027 ... P0AG51 38500588
    894340 8vsa:L31 (3.7) BS01 rna ? GO:0003735 ... P0A7M9 38500588
    894341 8vsa:L32 (3.7) BS01 rna N/A GO:0000027 ... P0A7N4 38500588
    894342 8vsa:L33 (3.7) BS01 rna ? GO:0000027 ... P0A7N9 38500588
    894343 8vsa:L34 (3.7) BS01 rna ? GO:0002181 ... P0A7P5 38500588
    894344 8vsa:L35 (3.7) BS01 rna ? GO:0002181 ... P0A7Q1 38500588
    894345 8vsa:L36 (3.7) BS01 rna ? GO:0002181 ... P0A7Q6 38500588
    894346 8vsa:S02 (3.7) BS01 rna ? GO:0000028 ... P0A7V0 38500588
    894347 8vsa:S02 (3.7) BS02 rna ? GO:0000028 ... P0A7V0 38500588
    894348 8vsa:S03 (3.7) BS01 rna ? GO:0000028 ... P0A7V3 38500588
    894349 8vsa:S03 (3.7) BS02 rna ? GO:0000028 ... P0A7V3 38500588
    894350 8vsa:S04 (3.7) BS01 rna ? GO:0000028 ... P0A7V8 38500588
    894351 8vsa:S05 (3.7) BS01 rna ? GO:0000028 ... P0A7W1 38500588
    894352 8vsa:S05 (3.7) BS02 rna ? GO:0000028 ... P0A7W1 38500588
    894353 8vsa:S06 (3.7) BS01 rna ? GO:0002181 ... P02358 38500588
    894354 8vsa:S07 (3.7) BS01 rna ? GO:0000028 ... P02359 38500588
    894355 8vsa:S08 (3.7) BS01 rna N/A GO:0000028 ... P0A7W7 38500588
    894356 8vsa:S09 (3.7) BS01 rna ? GO:0000049 ... P0A7X3 38500588
    894357 8vsa:S10 (3.7) BS01 rna N/A GO:0000049 ... P0A7R5 38500588
    894358 8vsa:S11 (3.7) BS01 rna ? GO:0002181 ... P0A7R9 38500588
    894359 8vsa:S12 (3.7) BS01 rna ? GO:0000049 ... P0A7S3 38500588
    894360 8vsa:S13 (3.7) BS01 rna ? GO:0000049 ... P0A7S9 38500588
    894361 8vsa:S13 (3.7) BS02 rna ? GO:0000049 ... P0A7S9 38500588
    894362 8vsa:S14 (3.7) BS01 rna ? GO:0000028 ... P0AG59 38500588
    894363 8vsa:S15 (3.7) BS01 rna ? GO:0000028 ... P0ADZ4 38500588
    894364 8vsa:S15 (3.7) BS02 rna ? GO:0000028 ... P0ADZ4 38500588
    894365 8vsa:S16 (3.7) BS01 rna ? GO:0000028 ... P0A7T3 38500588
    894366 8vsa:S17 (3.7) BS01 rna ? GO:0000028 ... P0AG63 38500588
    894367 8vsa:S18 (3.7) BS01 rna ? GO:0002181 ... P0A7T7 38500588
    894368 8vsa:S19 (3.7) BS01 rna N/A GO:0000028 ... P0A7U3 38500588
    894369 8vsa:S19 (3.7) BS02 rna N/A GO:0000028 ... P0A7U3 38500588
    894370 8vsa:S20 (3.7) BS01 rna ? GO:0000028 ... P0A7U7 38500588
    894371 8vsa:S21 (3.7) BS01 rna ? GO:0000028 ... P68679 38500588
    894372 8vsa:SMPB (3.7) BS01 rna ? GO:0003723 ... P0A832 38500588
    894373 8vsa:SMPB (3.7) BS02 rna ? GO:0003723 ... P0A832 38500588
    894374 8vsa:SMPB (3.7) BS03 rna ? GO:0003723 ... P0A832 38500588
    894375 8vsd:A (3.2) BS01 CA N/A GO:0007155 ... P06756 39288764
    894376 8vsd:A (3.2) BS02 CA N/A GO:0007155 ... P06756 39288764
    894377 8vsd:A (3.2) BS03 CA N/A GO:0007155 ... P06756 39288764
    894378 8vsd:A (3.2) BS04 CA N/A GO:0007155 ... P06756 39288764
    894379 8vsd:B (3.2) BS01 CA N/A N/A P26012 39288764
    894380 8vsd:B (3.2) BS02 MG N/A N/A P26012 39288764
    894381 8vsg:A (2.071) BS01 A1AD0 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 38518735
    894382 8vsg:B (2.071) BS01 A1AD0 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 38518735
    894383 8vsh:A (2.0) BS01 A1ADT ? GO:0015671 ... A9DF82 38959524
    894384 8vsh:B (2.0) BS01 A1ADT ? GO:0015671 ... A9DF82 38959524
    894385 8vsh:C (2.0) BS01 A1ADT ? GO:0015671 ... A9DF82 38959524
    894386 8vsh:D (2.0) BS01 A1ADT ? GO:0015671 ... A9DF82 38959524
    894387 8vsi:A (3.1) BS01 MG 3.6.3.- GO:0005524 ... A0A1D7Q186 38540742
    894388 8vsi:A (3.1) BS02 AOV 3.6.3.- GO:0005524 ... A0A1D7Q186 38540742
    894389 8vsi:A (3.1) BS03 AOV 3.6.3.- GO:0005524 ... A0A1D7Q186 38540742
    894390 8vsi:B (3.1) BS01 AOV 3.6.3.- GO:0005524 ... A0A376P7T7 38540742
    894391 8vsi:B (3.1) BS02 MG 3.6.3.- GO:0005524 ... A0A376P7T7 38540742
    894392 8vsi:B (3.1) BS03 AOV 3.6.3.- GO:0005524 ... A0A376P7T7 38540742
    894393 8vsj:A (2.28) BS01 peptide N/A N/A N/A 39672953
    894394 8vsj:B (2.28) BS01 peptide N/A N/A N/A 39672953
    894395 8vsj:C (2.28) BS01 peptide N/A N/A N/A 39672953
    894396 8vsk:AAA (1.515) BS01 HEM N/A GO:0004601 ... Q9NAV8 38959050
    894397 8vsk:AAA (1.515) BS02 OXY N/A GO:0004601 ... Q9NAV8 38959050
    894398 8vsk:BBB (1.515) BS01 HEM N/A GO:0004601 ... Q9NAV8 38959050
    894399 8vsk:BBB (1.515) BS02 Y8I N/A GO:0004601 ... Q9NAV8 38959050
    894400 8vsu:B (2.86) BS01 ADP N/A GO:0004672 ... Q7RTN6 38944401

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).