SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    894401 8vsw:A (-1.00) BS01 HTU N/A N/A N/A 38487244
    894402 8vsy:A (1.6) BS01 WSR N/A N/A N/A N/A
    894403 8vsy:B (1.6) BS01 WSR N/A N/A N/A N/A
    894404 8vt0:A (3.58) BS01 MG N/A GO:0000287 ... P00722 39108302
    894405 8vt0:B (3.58) BS01 MG N/A GO:0000287 ... P00722 39108302
    894406 8vt0:C (3.58) BS01 MG N/A GO:0000287 ... P00722 39108302
    894407 8vt0:D (3.58) BS01 MG N/A GO:0000287 ... P00722 39108302
    894408 8vt6:A (2.31) BS01 WHQ N/A N/A P47811 N/A
    894409 8vt7:A (2.66) BS01 GDP ? GO:0000226 ... Q13509 38609661
    894410 8vt7:B (2.66) BS01 GTP 3.6.5.- GO:0000226 ... P68363 38609661
    894411 8vt7:F (2.66) BS01 GDP ? GO:0000226 ... Q13509 38609661
    894412 8vt7:J (2.66) BS01 GTP 3.6.5.- GO:0000226 ... P68363 38609661
    894413 8vt9:A (2.9) BS01 CMP N/A GO:0005221 ... G0GA88 39300080
    894414 8vt9:A (2.9) BS02 PT5 N/A GO:0005221 ... G0GA88 39300080
    894415 8vt9:A (2.9) BS03 PT5 N/A GO:0005221 ... G0GA88 39300080
    894416 8vt9:B (2.9) BS01 CMP N/A GO:0005221 ... G0GA88 39300080
    894417 8vt9:B (2.9) BS02 PT5 N/A GO:0005221 ... G0GA88 39300080
    894418 8vt9:B (2.9) BS03 PT5 N/A GO:0005221 ... G0GA88 39300080
    894419 8vt9:C (2.9) BS01 CMP N/A GO:0005221 ... G0GA88 39300080
    894420 8vt9:C (2.9) BS02 PT5 N/A GO:0005221 ... G0GA88 39300080
    894421 8vt9:C (2.9) BS03 PT5 N/A GO:0005221 ... G0GA88 39300080
    894422 8vt9:D (2.9) BS01 PT5 N/A GO:0005221 ... G0GA88 39300080
    894423 8vt9:D (2.9) BS02 CMP N/A GO:0005221 ... G0GA88 39300080
    894424 8vt9:D (2.9) BS03 PT5 N/A GO:0005221 ... G0GA88 39300080
    894425 8vta:A (3.0) BS01 CMP N/A GO:0005221 ... G0GA88 39300080
    894426 8vta:A (3.0) BS02 PT5 N/A GO:0005221 ... G0GA88 39300080
    894427 8vta:B (3.0) BS01 CMP N/A GO:0005221 ... G0GA88 39300080
    894428 8vta:B (3.0) BS02 PT5 N/A GO:0005221 ... G0GA88 39300080
    894429 8vta:C (3.0) BS01 CMP N/A GO:0005221 ... G0GA88 39300080
    894430 8vta:C (3.0) BS02 PT5 N/A GO:0005221 ... G0GA88 39300080
    894431 8vta:D (3.0) BS01 CMP N/A GO:0005221 ... G0GA88 39300080
    894432 8vta:D (3.0) BS02 PT5 N/A GO:0005221 ... G0GA88 39300080
    894433 8vtb:A (2.5) BS01 CMP N/A GO:0005221 ... G0GA88 39300080
    894434 8vtb:B (2.5) BS01 CMP N/A GO:0005221 ... G0GA88 39300080
    894435 8vtb:C (2.5) BS01 CMP N/A GO:0005221 ... G0GA88 39300080
    894436 8vtb:D (2.5) BS01 CMP N/A GO:0005221 ... G0GA88 39300080
    894437 8vtf:A (2.4) BS01 A1ACP N/A N/A P53779 N/A
    894438 8vti:A (3.9) BS01 peptide N/A N/A Q9HAR2 39627215
    894439 8vtj:L (2.81) BS01 BCL ? GO:0009772 ... Q3J1A5 N/A
    894440 8vtj:L (2.81) BS02 BPH ? GO:0009772 ... Q3J1A5 N/A
    894441 8vtj:L (2.81) BS03 BCL ? GO:0009772 ... Q3J1A5 N/A
    894442 8vtj:L (2.81) BS04 FE ? GO:0009772 ... Q3J1A5 N/A
    894443 8vtj:L (2.81) BS05 BPH ? GO:0009772 ... Q3J1A5 N/A
    894444 8vtj:L (2.81) BS06 BCL ? GO:0009772 ... Q3J1A5 N/A
    894445 8vtj:M (2.81) BS01 BCL ? GO:0009772 ... Q3J1A6 N/A
    894446 8vtj:M (2.81) BS02 BPH ? GO:0009772 ... Q3J1A6 N/A
    894447 8vtj:M (2.81) BS03 BCL ? GO:0009772 ... Q3J1A6 N/A
    894448 8vtj:M (2.81) BS04 FE ? GO:0009772 ... Q3J1A6 N/A
    894449 8vtj:M (2.81) BS05 BPH ? GO:0009772 ... Q3J1A6 N/A
    894450 8vtj:M (2.81) BS06 SPO ? GO:0009772 ... Q3J1A6 N/A
    894451 8vtj:M (2.81) BS07 BCL ? GO:0009772 ... Q3J1A6 N/A
    894452 8vtk:L (3.07) BS01 BPH ? GO:0009772 ... Q3J1A5 N/A
    894453 8vtk:L (3.07) BS02 BCL ? GO:0009772 ... Q3J1A5 N/A
    894454 8vtk:L (3.07) BS03 BPH ? GO:0009772 ... Q3J1A5 N/A
    894455 8vtk:L (3.07) BS04 BCL ? GO:0009772 ... Q3J1A5 N/A
    894456 8vtk:L (3.07) BS05 BCL ? GO:0009772 ... Q3J1A5 N/A
    894457 8vtk:M (3.07) BS01 BPH ? GO:0009772 ... Q3J1A6 N/A
    894458 8vtk:M (3.07) BS02 BCL ? GO:0009772 ... Q3J1A6 N/A
    894459 8vtk:M (3.07) BS03 BPH ? GO:0009772 ... Q3J1A6 N/A
    894460 8vtk:M (3.07) BS04 BCL ? GO:0009772 ... Q3J1A6 N/A
    894461 8vtk:M (3.07) BS05 SPO ? GO:0009772 ... Q3J1A6 N/A
    894462 8vtk:M (3.07) BS06 BCL ? GO:0009772 ... Q3J1A6 N/A
    894463 8vtl:L (3.05) BS01 BPH ? GO:0009772 ... Q3J1A5 N/A
    894464 8vtl:L (3.05) BS02 BCL ? GO:0009772 ... Q3J1A5 N/A
    894465 8vtl:L (3.05) BS03 BCL ? GO:0009772 ... Q3J1A5 N/A
    894466 8vtl:L (3.05) BS04 FE ? GO:0009772 ... Q3J1A5 N/A
    894467 8vtl:L (3.05) BS05 BPH ? GO:0009772 ... Q3J1A5 N/A
    894468 8vtl:L (3.05) BS06 BCL ? GO:0009772 ... Q3J1A5 N/A
    894469 8vtl:M (3.05) BS01 BPH ? GO:0009772 ... Q3J1A6 N/A
    894470 8vtl:M (3.05) BS02 BCL ? GO:0009772 ... Q3J1A6 N/A
    894471 8vtl:M (3.05) BS03 BCL ? GO:0009772 ... Q3J1A6 N/A
    894472 8vtl:M (3.05) BS04 FE ? GO:0009772 ... Q3J1A6 N/A
    894473 8vtl:M (3.05) BS05 SPO ? GO:0009772 ... Q3J1A6 N/A
    894474 8vtl:M (3.05) BS06 BPH ? GO:0009772 ... Q3J1A6 N/A
    894475 8vtl:M (3.05) BS07 BCL ? GO:0009772 ... Q3J1A6 N/A
    894476 8vtm:L (3.51) BS01 BCL ? GO:0009772 ... Q3J1A5 N/A
    894477 8vtm:L (3.51) BS02 BCL ? GO:0009772 ... Q3J1A5 N/A
    894478 8vtm:L (3.51) BS03 FE ? GO:0009772 ... Q3J1A5 N/A
    894479 8vtm:L (3.51) BS04 BPH ? GO:0009772 ... Q3J1A5 N/A
    894480 8vtm:L (3.51) BS05 BPH ? GO:0009772 ... Q3J1A5 N/A
    894481 8vtm:L (3.51) BS06 BCL ? GO:0009772 ... Q3J1A5 N/A
    894482 8vtm:M (3.51) BS01 BCL ? GO:0009772 ... Q3J1A6 N/A
    894483 8vtm:M (3.51) BS02 BCL ? GO:0009772 ... Q3J1A6 N/A
    894484 8vtm:M (3.51) BS03 FE ? GO:0009772 ... Q3J1A6 N/A
    894485 8vtm:M (3.51) BS04 BPH ? GO:0009772 ... Q3J1A6 N/A
    894486 8vtm:M (3.51) BS05 SPO ? GO:0009772 ... Q3J1A6 N/A
    894487 8vtm:M (3.51) BS06 BPH ? GO:0009772 ... Q3J1A6 N/A
    894488 8vtm:M (3.51) BS07 BCL ? GO:0009772 ... Q3J1A6 N/A
    894489 8vtn:L (3.57) BS01 BCL ? GO:0009772 ... Q3J1A5 N/A
    894490 8vtn:L (3.57) BS02 BCL ? GO:0009772 ... Q3J1A5 N/A
    894491 8vtn:L (3.57) BS03 FE ? GO:0009772 ... Q3J1A5 N/A
    894492 8vtn:L (3.57) BS04 BPH ? GO:0009772 ... Q3J1A5 N/A
    894493 8vtn:L (3.57) BS05 BPH ? GO:0009772 ... Q3J1A5 N/A
    894494 8vtn:L (3.57) BS06 BCL ? GO:0009772 ... Q3J1A5 N/A
    894495 8vtn:M (3.57) BS01 BCL ? GO:0009772 ... Q3J1A6 N/A
    894496 8vtn:M (3.57) BS02 BCL ? GO:0009772 ... Q3J1A6 N/A
    894497 8vtn:M (3.57) BS03 FE ? GO:0009772 ... Q3J1A6 N/A
    894498 8vtn:M (3.57) BS04 BPH ? GO:0009772 ... Q3J1A6 N/A
    894499 8vtn:M (3.57) BS05 SPO ? GO:0009772 ... Q3J1A6 N/A
    894500 8vtn:M (3.57) BS06 BPH ? GO:0009772 ... Q3J1A6 N/A
    894501 8vtn:M (3.57) BS07 BCL ? GO:0009772 ... Q3J1A6 N/A
    894502 8vto:L (3.09) BS01 BPH ? GO:0009772 ... Q3J1A5 N/A
    894503 8vto:L (3.09) BS02 BCL ? GO:0009772 ... Q3J1A5 N/A
    894504 8vto:L (3.09) BS03 BPH ? GO:0009772 ... Q3J1A5 N/A
    894505 8vto:L (3.09) BS04 BCL ? GO:0009772 ... Q3J1A5 N/A
    894506 8vto:L (3.09) BS05 FE ? GO:0009772 ... Q3J1A5 N/A
    894507 8vto:L (3.09) BS06 BCL ? GO:0009772 ... Q3J1A5 N/A
    894508 8vto:M (3.09) BS01 BPH ? GO:0009772 ... Q3J1A6 N/A
    894509 8vto:M (3.09) BS02 BCL ? GO:0009772 ... Q3J1A6 N/A
    894510 8vto:M (3.09) BS03 BPH ? GO:0009772 ... Q3J1A6 N/A
    894511 8vto:M (3.09) BS04 BCL ? GO:0009772 ... Q3J1A6 N/A
    894512 8vto:M (3.09) BS05 FE ? GO:0009772 ... Q3J1A6 N/A
    894513 8vto:M (3.09) BS06 SPO ? GO:0009772 ... Q3J1A6 N/A
    894514 8vto:M (3.09) BS07 BCL ? GO:0009772 ... Q3J1A6 N/A
    894515 8vtq:A (2.05) BS01 HEM N/A GO:0004833 ... P48775 39106326
    894516 8vtq:A (2.05) BS02 ZIQ N/A GO:0004833 ... P48775 39106326
    894517 8vtq:A (2.05) BS03 A1ADX N/A GO:0004833 ... P48775 39106326
    894518 8vtq:A (2.05) BS04 A1ADX N/A GO:0004833 ... P48775 39106326
    894519 8vtq:B (2.05) BS01 A1ADX N/A GO:0004833 ... P48775 39106326
    894520 8vtq:B (2.05) BS02 HEM N/A GO:0004833 ... P48775 39106326
    894521 8vtq:B (2.05) BS03 ZIQ N/A GO:0004833 ... P48775 39106326
    894522 8vtq:B (2.05) BS04 A1ADX N/A GO:0004833 ... P48775 39106326
    894523 8vtq:C (2.05) BS01 HEM N/A GO:0004833 ... P48775 39106326
    894524 8vtq:C (2.05) BS02 ZIQ N/A GO:0004833 ... P48775 39106326
    894525 8vtq:C (2.05) BS03 A1ADX N/A GO:0004833 ... P48775 39106326
    894526 8vtq:C (2.05) BS04 A1ADX N/A GO:0004833 ... P48775 39106326
    894527 8vtq:D (2.05) BS01 A1ADX N/A GO:0004833 ... P48775 39106326
    894528 8vtq:D (2.05) BS02 HEM N/A GO:0004833 ... P48775 39106326
    894529 8vtq:D (2.05) BS03 ZIQ N/A GO:0004833 ... P48775 39106326
    894530 8vtq:D (2.05) BS04 A1ADX N/A GO:0004833 ... P48775 39106326
    894531 8vts:B (1.91) BS01 RIO ? GO:0003677 ... Q60954 39183959
    894532 8vts:D (1.91) BS01 RIO ? GO:0003677 ... Q60954 39183959
    894533 8vtt:D (2.45) BS01 RIO ? GO:0003677 ... Q60954 39183959
    894534 8vtu:10 (2.4) BS01 rna N/A GO:0003735 ... P60493 39039256
    894535 8vtu:10 (2.4) BS02 rna N/A GO:0003735 ... P60493 39039256
    894536 8vtu:10 (2.4) BS03 rna N/A GO:0003735 ... P60493 39039256
    894537 8vtu:10 (2.4) BS04 MG N/A GO:0003735 ... P60493 39039256
    894538 8vtu:10 (2.4) BS05 MG N/A GO:0003735 ... P60493 39039256
    894539 8vtu:10 (2.4) BS06 MG N/A GO:0003735 ... P60493 39039256
    894540 8vtu:11 (2.4) BS01 rna N/A GO:0003735 ... P60494 39039256
    894541 8vtu:11 (2.4) BS02 rna N/A GO:0003735 ... P60494 39039256
    894542 8vtu:11 (2.4) BS03 MG N/A GO:0003735 ... P60494 39039256
    894543 8vtu:11 (2.4) BS04 MG N/A GO:0003735 ... P60494 39039256
    894544 8vtu:12 (2.4) BS01 rna N/A GO:0003735 ... Q5SHP6 39039256
    894545 8vtu:12 (2.4) BS02 MG N/A GO:0003735 ... Q5SHP6 39039256
    894546 8vtu:13 (2.4) BS01 rna N/A GO:0003735 ... Q5SHQ6 39039256
    894547 8vtu:13 (2.4) BS02 rna N/A GO:0003735 ... Q5SHQ6 39039256
    894548 8vtu:13 (2.4) BS03 MG N/A GO:0003735 ... Q5SHQ6 39039256
    894549 8vtu:13 (2.4) BS04 MG N/A GO:0003735 ... Q5SHQ6 39039256
    894550 8vtu:13 (2.4) BS05 MG N/A GO:0003735 ... Q5SHQ6 39039256
    894551 8vtu:14 (2.4) BS01 rna N/A GO:0003735 ... Q5SJE1 39039256
    894552 8vtu:14 (2.4) BS02 ZN N/A GO:0003735 ... Q5SJE1 39039256
    894553 8vtu:15 (2.4) BS01 rna N/A GO:0003735 ... P80339 39039256
    894554 8vtu:15 (2.4) BS02 MG N/A GO:0003735 ... P80339 39039256
    894555 8vtu:15 (2.4) BS03 ZN N/A GO:0003735 ... P80339 39039256
    894556 8vtu:16 (2.4) BS01 rna N/A GO:0000049 ... P35871 39039256
    894557 8vtu:16 (2.4) BS02 MG N/A GO:0000049 ... P35871 39039256
    894558 8vtu:16 (2.4) BS03 ZN N/A GO:0000049 ... P35871 39039256
    894559 8vtu:17 (2.4) BS01 rna N/A GO:0003735 ... P80340 39039256
    894560 8vtu:17 (2.4) BS02 MG N/A GO:0003735 ... P80340 39039256
    894561 8vtu:17 (2.4) BS03 MG N/A GO:0003735 ... P80340 39039256
    894562 8vtu:18 (2.4) BS01 rna N/A GO:0003735 ... Q5SKU1 39039256
    894563 8vtu:18 (2.4) BS02 MG N/A GO:0003735 ... Q5SKU1 39039256
    894564 8vtu:18 (2.4) BS03 MG N/A GO:0003735 ... Q5SKU1 39039256
    894565 8vtu:18 (2.4) BS04 MG N/A GO:0003735 ... Q5SKU1 39039256
    894566 8vtu:18 (2.4) BS05 MG N/A GO:0003735 ... Q5SKU1 39039256
    894567 8vtu:19 (2.4) BS01 rna N/A GO:0003735 ... Q5SHR2 39039256
    894568 8vtu:19 (2.4) BS02 ZN N/A GO:0003735 ... Q5SHR2 39039256
    894569 8vtu:1D (2.4) BS01 rna N/A GO:0002181 ... P60405 39039256
    894570 8vtu:1D (2.4) BS02 rna N/A GO:0002181 ... P60405 39039256
    894571 8vtu:1D (2.4) BS03 MG N/A GO:0002181 ... P60405 39039256
    894572 8vtu:1D (2.4) BS04 MG N/A GO:0002181 ... P60405 39039256
    894573 8vtu:1D (2.4) BS05 MG N/A GO:0002181 ... P60405 39039256
    894574 8vtu:1D (2.4) BS06 MG N/A GO:0002181 ... P60405 39039256
    894575 8vtu:1D (2.4) BS07 MG N/A GO:0002181 ... P60405 39039256
    894576 8vtu:1D (2.4) BS08 MG N/A GO:0002181 ... P60405 39039256
    894577 8vtu:1D (2.4) BS09 MG N/A GO:0002181 ... P60405 39039256
    894578 8vtu:1D (2.4) BS10 MG N/A GO:0002181 ... P60405 39039256
    894579 8vtu:1D (2.4) BS11 MG N/A GO:0002181 ... P60405 39039256
    894580 8vtu:1D (2.4) BS12 MG N/A GO:0002181 ... P60405 39039256
    894581 8vtu:1D (2.4) BS13 MG N/A GO:0002181 ... P60405 39039256
    894582 8vtu:1D (2.4) BS14 MG N/A GO:0002181 ... P60405 39039256
    894583 8vtu:1E (2.4) BS01 rna N/A GO:0003735 ... Q5SHN8 39039256
    894584 8vtu:1E (2.4) BS02 MG N/A GO:0003735 ... Q5SHN8 39039256
    894585 8vtu:1E (2.4) BS03 MG N/A GO:0003735 ... Q5SHN8 39039256
    894586 8vtu:1E (2.4) BS04 MG N/A GO:0003735 ... Q5SHN8 39039256
    894587 8vtu:1E (2.4) BS05 MG N/A GO:0003735 ... Q5SHN8 39039256
    894588 8vtu:1F (2.4) BS01 rna N/A GO:0003735 ... Q5SHN9 39039256
    894589 8vtu:1F (2.4) BS02 MG N/A GO:0003735 ... Q5SHN9 39039256
    894590 8vtu:1F (2.4) BS03 MG N/A GO:0003735 ... Q5SHN9 39039256
    894591 8vtu:1F (2.4) BS04 MG N/A GO:0003735 ... Q5SHN9 39039256
    894592 8vtu:1F (2.4) BS05 MG N/A GO:0003735 ... Q5SHN9 39039256
    894593 8vtu:1F (2.4) BS06 MG N/A GO:0003735 ... Q5SHN9 39039256
    894594 8vtu:1F (2.4) BS07 MG N/A GO:0003735 ... Q5SHN9 39039256
    894595 8vtu:1F (2.4) BS08 MG N/A GO:0003735 ... Q5SHN9 39039256
    894596 8vtu:1F (2.4) BS09 MG N/A GO:0003735 ... Q5SHN9 39039256
    894597 8vtu:1F (2.4) BS10 MG N/A GO:0003735 ... Q5SHN9 39039256
    894598 8vtu:1G (2.4) BS01 rna N/A GO:0000049 ... Q5SHQ0 39039256
    894599 8vtu:1G (2.4) BS02 rna N/A GO:0000049 ... Q5SHQ0 39039256
    894600 8vtu:1G (2.4) BS03 rna N/A GO:0000049 ... Q5SHQ0 39039256

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).