SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 4464 4465 4466 4467 4468 4469 4470 4471 4472 4473 4474 4475 4476 4477 4478 4479 4480 4481 4482 4483 4484 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    894601 8urk:A (2.11) BS04 dna N/A GO:0003676 ... A0A8I1DKW0 39244607
    894602 8urk:A (2.11) BS05 FRU N/A GO:0003676 ... A0A8I1DKW0 39244607
    894603 8urk:A (2.11) BS06 SFG N/A GO:0003676 ... A0A8I1DKW0 39244607
    894604 8urk:B (2.11) BS01 dna N/A GO:0003676 ... A0A8I1DKW0 39244607
    894605 8urk:B (2.11) BS02 dna N/A GO:0003676 ... A0A8I1DKW0 39244607
    894606 8urk:B (2.11) BS03 dna N/A GO:0003676 ... A0A8I1DKW0 39244607
    894607 8urk:B (2.11) BS04 FRU N/A GO:0003676 ... A0A8I1DKW0 39244607
    894608 8urk:B (2.11) BS05 FRU N/A GO:0003676 ... A0A8I1DKW0 39244607
    894609 8urk:B (2.11) BS06 SFG N/A GO:0003676 ... A0A8I1DKW0 39244607
    894610 8urk:C (2.11) BS01 dna N/A GO:0003676 ... A0A8I1DKW0 39244607
    894611 8urk:C (2.11) BS02 dna N/A GO:0003676 ... A0A8I1DKW0 39244607
    894612 8urk:C (2.11) BS03 dna N/A GO:0003676 ... A0A8I1DKW0 39244607
    894613 8urk:C (2.11) BS04 SFG N/A GO:0003676 ... A0A8I1DKW0 39244607
    894614 8urk:D (2.11) BS01 dna N/A GO:0003676 ... A0A8I1DKW0 39244607
    894615 8urk:D (2.11) BS02 dna N/A GO:0003676 ... A0A8I1DKW0 39244607
    894616 8urk:D (2.11) BS03 dna N/A GO:0003676 ... A0A8I1DKW0 39244607
    894617 8urk:D (2.11) BS04 SFG N/A GO:0003676 ... A0A8I1DKW0 39244607
    894618 8url:A (2.2) BS01 CA N/A GO:0004308 ... N/A 39251137
    894619 8url:A (2.2) BS02 CA N/A GO:0004308 ... N/A 39251137
    894620 8urm:B (3.0) BS01 rna N/A GO:0000027 ... P60422 40789848
    894621 8urm:B (3.0) BS02 rna N/A GO:0000027 ... P60422 40789848
    894622 8urm:C (3.0) BS01 rna N/A GO:0000027 ... P60438 40789848
    894623 8urm:D (3.0) BS01 rna N/A GO:0001070 ... P60723 40789848
    894624 8urm:E (3.0) BS01 rna N/A GO:0000027 ... P62399 40789848
    894625 8urm:E (3.0) BS02 rna N/A GO:0000027 ... P62399 40789848
    894626 8urm:E (3.0) BS03 rna N/A GO:0000027 ... P62399 40789848
    894627 8urm:F (3.0) BS01 rna N/A GO:0000027 ... P0AG55 40789848
    894628 8urm:G (3.0) BS01 rna N/A GO:0002181 ... P0A7R1 40789848
    894629 8urm:J (3.0) BS01 rna N/A GO:0002181 ... P0AA10 40789848
    894630 8urm:K (3.0) BS01 rna N/A GO:0002181 ... P0ADY3 40789848
    894631 8urm:K (3.0) BS02 rna N/A GO:0002181 ... P0ADY3 40789848
    894632 8urm:L (3.0) BS01 rna N/A GO:0002181 ... P02413 40789848
    894633 8urm:M (3.0) BS01 rna N/A GO:0000027 ... P0ADY7 40789848
    894634 8urm:M (3.0) BS02 rna N/A GO:0000027 ... P0ADY7 40789848
    894635 8urm:M (3.0) BS03 rna N/A GO:0000027 ... P0ADY7 40789848
    894636 8urm:N (3.0) BS01 rna N/A GO:0000027 ... P0AG44 40789848
    894637 8urm:O (3.0) BS01 rna N/A GO:0002181 ... P0C018 40789848
    894638 8urm:O (3.0) BS02 rna N/A GO:0002181 ... P0C018 40789848
    894639 8urm:P (3.0) BS01 rna N/A GO:0000027 ... P0A7K6 40789848
    894640 8urm:P (3.0) BS02 rna N/A GO:0000027 ... P0A7K6 40789848
    894641 8urm:Q (3.0) BS01 rna N/A GO:0000027 ... P0A7L3 40789848
    894642 8urm:R (3.0) BS01 rna N/A GO:0002181 ... P0AG48 40789848
    894643 8urm:S (3.0) BS01 rna N/A GO:0002181 ... P61175 40789848
    894644 8urm:T (3.0) BS01 rna N/A GO:0000027 ... P0ADZ0 40789848
    894645 8urm:U (3.0) BS01 rna N/A GO:0000027 ... P60624 40789848
    894646 8urm:V (3.0) BS01 rna N/A GO:0000027 ... P68919 40789848
    894647 8urm:V (3.0) BS02 rna N/A GO:0000027 ... P68919 40789848
    894648 8urm:W (3.0) BS01 rna N/A GO:0000027 ... P0A7L8 40789848
    894649 8urm:W (3.0) BS02 rna N/A GO:0000027 ... P0A7L8 40789848
    894650 8urm:X (3.0) BS01 rna N/A GO:0000027 ... P0A7M2 40789848
    894651 8urm:Y (3.0) BS01 rna N/A GO:0000027 ... P0A7M6 40789848
    894652 8urm:Z (3.0) BS01 rna N/A GO:0000027 ... P0AG51 40789848
    894653 8urm:Z (3.0) BS02 rna N/A GO:0000027 ... P0AG51 40789848
    894654 8urm:a (3.0) BS01 rna N/A GO:0002181 ... P0A7M9 40789848
    894655 8urm:b (3.0) BS01 rna N/A GO:0000027 ... P0A7N4 40789848
    894656 8urm:c (3.0) BS01 rna N/A GO:0000027 ... P0A7N9 40789848
    894657 8urm:d (3.0) BS01 rna N/A GO:0002181 ... P0A7P5 40789848
    894658 8urm:e (3.0) BS01 rna N/A GO:0002181 ... P0A7Q1 40789848
    894659 8urm:f (3.0) BS01 rna N/A GO:0002181 ... P0A7Q6 40789848
    894660 8urm:g (3.0) BS01 rna N/A GO:0000028 ... P0A7V0 40789848
    894661 8urm:h (3.0) BS01 rna N/A GO:0000028 ... P0A7V3 40789848
    894662 8urm:i (3.0) BS01 rna N/A GO:0000028 ... P0A7V8 40789848
    894663 8urm:j (3.0) BS01 rna N/A GO:0000028 ... P0A7W1 40789848
    894664 8urm:k (3.0) BS01 rna N/A GO:0002181 ... P02358 40789848
    894665 8urm:l (3.0) BS01 rna N/A GO:0000028 ... P02359 40789848
    894666 8urm:m (3.0) BS01 rna N/A GO:0000028 ... P0A7W7 40789848
    894667 8urm:n (3.0) BS01 rna N/A GO:0002181 ... P0A7X3 40789848
    894668 8urm:o (3.0) BS01 rna N/A GO:0000049 ... P0A7R5 40789848
    894669 8urm:p (3.0) BS01 rna N/A GO:0002181 ... P0A7R9 40789848
    894670 8urm:q (3.0) BS01 rna N/A GO:0000049 ... P0A7S3 40789848
    894671 8urm:r (3.0) BS01 rna N/A GO:0000049 ... P0A7S9 40789848
    894672 8urm:r (3.0) BS02 rna N/A GO:0000049 ... P0A7S9 40789848
    894673 8urm:s (3.0) BS01 rna N/A GO:0000028 ... P0AG59 40789848
    894674 8urm:t (3.0) BS01 rna N/A GO:0000028 ... P0ADZ4 40789848
    894675 8urm:t (3.0) BS02 rna N/A GO:0000028 ... P0ADZ4 40789848
    894676 8urm:u (3.0) BS01 rna N/A GO:0000028 ... P0A7T3 40789848
    894677 8urm:v (3.0) BS01 rna N/A GO:0000028 ... P0AG63 40789848
    894678 8urm:w (3.0) BS01 rna N/A GO:0002181 ... P0A7T7 40789848
    894679 8urm:x (3.0) BS01 rna N/A GO:0002181 ... P0A7U3 40789848
    894680 8urm:y (3.0) BS01 rna N/A GO:0000028 ... P0A7U7 40789848
    894681 8urm:z (3.0) BS01 rna N/A GO:0000028 ... P68679 40789848
    894682 8urp:A (2.9) BS01 MG N/A GO:0004142 ... P17898 39747155
    894683 8urp:A (2.9) BS02 MG N/A GO:0004142 ... P17898 39747155
    894684 8urp:A (2.9) BS03 CDC N/A GO:0004142 ... P17898 39747155
    894685 8urp:B (2.9) BS01 MG N/A GO:0004142 ... P17898 39747155
    894686 8urp:B (2.9) BS02 MG N/A GO:0004142 ... P17898 39747155
    894687 8urp:B (2.9) BS03 CDC N/A GO:0004142 ... P17898 39747155
    894688 8urq:A (3.3) BS01 dna N/A GO:0000228 ... P23179 39304764
    894689 8urq:A (3.3) BS02 MG N/A GO:0000228 ... P23179 39304764
    894690 8urq:B (3.3) BS01 dna N/A GO:0000794 ... Q02721 39304764
    894691 8urq:F (3.3) BS01 dna N/A GO:0000794 ... P33323 39304764
    894692 8urt:A (3.1) BS01 MG N/A GO:0004142 ... P17898 39747155
    894693 8urt:A (3.1) BS02 MG N/A GO:0004142 ... P17898 39747155
    894694 8urt:A (3.1) BS03 CTI N/A GO:0004142 ... P17898 39747155
    894695 8urt:B (3.1) BS01 MG N/A GO:0004142 ... P17898 39747155
    894696 8urt:B (3.1) BS02 CTI N/A GO:0004142 ... P17898 39747155
    894697 8uru:A (3.7) BS01 dna N/A GO:0000228 ... P23179 39304764
    894698 8uru:A (3.7) BS02 MG N/A GO:0000228 ... P23179 39304764
    894699 8uru:F (3.7) BS01 dna N/A GO:0000794 ... P33323 39304764
    894700 8urw:C (2.79) BS01 dna 2.7.7.6 GO:0003677 ... Q31N17 38354263
    894701 8urw:C (2.79) BS02 dna 2.7.7.6 GO:0003677 ... Q31N17 38354263
    894702 8urw:C (2.79) BS03 rna 2.7.7.6 GO:0003677 ... Q31N17 38354263
    894703 8urw:D (2.79) BS01 dna 2.7.7.6 GO:0000287 ... P42079 38354263
    894704 8urw:D (2.79) BS02 dna 2.7.7.6 GO:0000287 ... P42079 38354263
    894705 8urw:D (2.79) BS03 rna 2.7.7.6 GO:0000287 ... P42079 38354263
    894706 8urw:D (2.79) BS04 MG 2.7.7.6 GO:0000287 ... P42079 38354263
    894707 8urw:D (2.79) BS05 ZN 2.7.7.6 GO:0000287 ... P42079 38354263
    894708 8urw:G (2.79) BS01 dna ? GO:0005829 ... Q31QK2 38354263
    894709 8urw:Z (2.79) BS01 dna 2.7.7.6 GO:0003677 ... Q31N15 38354263
    894710 8urw:Z (2.79) BS02 ZN 2.7.7.6 GO:0003677 ... Q31N15 38354263
    894711 8urw:Z (2.79) BS03 CTP 2.7.7.6 GO:0003677 ... Q31N15 38354263
    894712 8urx:0 (6.6) BS01 rna N/A GO:0002181 ... P0AG48 39117885
    894713 8urx:1 (6.6) BS01 rna ? GO:0002181 ... P61175 39117885
    894714 8urx:2 (6.6) BS01 rna N/A GO:0000027 ... P0ADZ0 39117885
    894715 8urx:3 (6.6) BS01 rna N/A GO:0000027 ... P60624 39117885
    894716 8urx:4 (6.6) BS01 rna N/A GO:0000027 ... P68919 39117885
    894717 8urx:9 (6.6) BS01 rna ? GO:0002181 ... P0A7J3 39117885
    894718 8urx:AA (6.6) BS01 dna 2.7.7.6 GO:0000345 ... P0A8V2 39117885
    894719 8urx:AA (6.6) BS02 dna 2.7.7.6 GO:0000345 ... P0A8V2 39117885
    894720 8urx:AA (6.6) BS03 rna 2.7.7.6 GO:0000345 ... P0A8V2 39117885
    894721 8urx:AB (6.6) BS01 dna ? GO:0001000 ... P0AFW0 39117885
    894722 8urx:AE (6.6) BS01 dna 2.7.7.6 GO:0000287 ... P0A8T7 39117885
    894723 8urx:AE (6.6) BS02 dna 2.7.7.6 GO:0000287 ... P0A8T7 39117885
    894724 8urx:AE (6.6) BS03 rna 2.7.7.6 GO:0000287 ... P0A8T7 39117885
    894725 8urx:AE (6.6) BS04 MG 2.7.7.6 GO:0000287 ... P0A8T7 39117885
    894726 8urx:AE (6.6) BS05 ZN 2.7.7.6 GO:0000287 ... P0A8T7 39117885
    894727 8urx:AE (6.6) BS06 ZN 2.7.7.6 GO:0000287 ... P0A8T7 39117885
    894728 8urx:C (6.6) BS01 rna ? GO:0002181 ... P0A7T7 39117885
    894729 8urx:E (6.6) BS01 rna ? GO:0000028 ... P0A7U7 39117885
    894730 8urx:F (6.6) BS01 rna ? GO:0000028 ... P68679 39117885
    894731 8urx:G (6.6) BS01 rna ? GO:0000028 ... P0A7V0 39117885
    894732 8urx:I (6.6) BS01 rna ? GO:0000028 ... P0A7V3 39117885
    894733 8urx:I (6.6) BS02 rna ? GO:0000028 ... P0A7V3 39117885
    894734 8urx:J (6.6) BS01 rna ? GO:0000028 ... P0A7V8 39117885
    894735 8urx:K (6.6) BS01 rna ? GO:0000028 ... P0A7W1 39117885
    894736 8urx:K (6.6) BS02 rna ? GO:0000028 ... P0A7W1 39117885
    894737 8urx:L (6.6) BS01 rna ? GO:0002181 ... P02358 39117885
    894738 8urx:M (6.6) BS01 rna ? GO:0000028 ... P02359 39117885
    894739 8urx:M (6.6) BS02 rna ? GO:0000028 ... P02359 39117885
    894740 8urx:N (6.6) BS01 rna N/A GO:0000028 ... P0A7W7 39117885
    894741 8urx:O (6.6) BS01 rna N/A GO:0002181 ... P0A7X3 39117885
    894742 8urx:P (6.6) BS01 rna N/A GO:0000049 ... P0A7R5 39117885
    894743 8urx:Q (6.6) BS01 rna ? GO:0002181 ... P0A7R9 39117885
    894744 8urx:R (6.6) BS01 rna ? GO:0000049 ... P0A7S3 39117885
    894745 8urx:S (6.6) BS01 rna N/A GO:0000028 ... P0AG59 39117885
    894746 8urx:T (6.6) BS01 rna N/A GO:0000028 ... P0ADZ4 39117885
    894747 8urx:T (6.6) BS02 rna N/A GO:0000028 ... P0ADZ4 39117885
    894748 8urx:U (6.6) BS01 rna ? GO:0000028 ... P0A7T3 39117885
    894749 8urx:V (6.6) BS01 rna N/A GO:0000028 ... P0AG63 39117885
    894750 8urx:W (6.6) BS01 rna N/A GO:0002181 ... P0A7U3 39117885
    894751 8urx:X (6.6) BS01 rna ? GO:0000049 ... P0A7S9 39117885
    894752 8urx:X (6.6) BS02 rna ? GO:0000049 ... P0A7S9 39117885
    894753 8urx:Y (6.6) BS01 rna ? GO:0000027 ... P0A7J7 39117885
    894754 8urx:b (6.6) BS01 rna ? GO:0000027 ... P0A7L8 39117885
    894755 8urx:b (6.6) BS02 rna ? GO:0000027 ... P0A7L8 39117885
    894756 8urx:c (6.6) BS01 rna ? GO:0003735 ... A0A1X3JA73 39117885
    894757 8urx:e (6.6) BS01 rna N/A GO:0003735 ... N/A 39117885
    894758 8urx:f (6.6) BS01 rna N/A GO:0003735 ... N/A 39117885
    894759 8urx:f (6.6) BS02 rna N/A GO:0003735 ... N/A 39117885
    894760 8urx:g (6.6) BS01 rna ? GO:0002181 ... P0A7M9 39117885
    894761 8urx:h (6.6) BS01 rna ? GO:0000027 ... P60422 39117885
    894762 8urx:i (6.6) BS01 rna N/A GO:0003735 ... N/A 39117885
    894763 8urx:j (6.6) BS01 rna ? GO:0000027 ... P60438 39117885
    894764 8urx:k (6.6) BS01 rna N/A GO:0003735 ... N/A 39117885
    894765 8urx:l (6.6) BS01 rna ? GO:0003735 ... A1AGK6 39117885
    894766 8urx:m (6.6) BS01 rna ? GO:0003735 ... B7MGC4 39117885
    894767 8urx:n (6.6) BS01 rna N/A GO:0003735 ... N/A 39117885
    894768 8urx:n (6.6) BS02 rna N/A GO:0003735 ... N/A 39117885
    894769 8urx:n (6.6) BS03 rna N/A GO:0003735 ... N/A 39117885
    894770 8urx:o (6.6) BS01 rna ? GO:0002181 ... P0A7Q1 39117885
    894771 8urx:p (6.6) BS01 rna ? GO:0002181 ... C3SR17 39117885
    894772 8urx:q (6.6) BS01 rna ? GO:0003735 ... A0A0E2L017 39117885
    894773 8urx:r (6.6) BS01 rna N/A GO:0003735 ... N/A 39117885
    894774 8urx:s (6.6) BS01 rna N/A GO:0003735 ... N/A 39117885
    894775 8urx:t (6.6) BS01 rna ? GO:0003735 ... S1NW45 39117885
    894776 8urx:t (6.6) BS02 rna ? GO:0003735 ... S1NW45 39117885
    894777 8urx:u (6.6) BS01 rna ? GO:0003735 ... A0A037Y8L6 39117885
    894778 8urx:v (6.6) BS01 rna ? GO:0000027 ... P0ADY7 39117885
    894779 8urx:v (6.6) BS02 rna ? GO:0000027 ... P0ADY7 39117885
    894780 8urx:w (6.6) BS01 rna N/A GO:0003735 ... N/A 39117885
    894781 8urx:x (6.6) BS01 rna N/A GO:0003735 ... N/A 39117885
    894782 8urx:x (6.6) BS02 rna N/A GO:0003735 ... N/A 39117885
    894783 8urx:y (6.6) BS01 rna N/A GO:0003735 ... N/A 39117885
    894784 8urx:z (6.6) BS01 rna ? GO:0000027 ... B7MAS6 39117885
    894785 8ury:0 (3.1) BS01 rna ? GO:0002181 ... P0AG48 39117885
    894786 8ury:1 (3.1) BS01 rna ? GO:0002181 ... P61175 39117885
    894787 8ury:2 (3.1) BS01 rna ? GO:0000027 ... P0ADZ0 39117885
    894788 8ury:3 (3.1) BS01 rna ? GO:0000027 ... P60624 39117885
    894789 8ury:4 (3.1) BS01 rna ? GO:0000027 ... P68919 39117885
    894790 8ury:9 (3.1) BS01 rna ? GO:0002181 ... P0A7J3 39117885
    894791 8ury:AA (3.1) BS01 dna 2.7.7.6 GO:0000345 ... P0A8V2 39117885
    894792 8ury:AA (3.1) BS02 dna 2.7.7.6 GO:0000345 ... P0A8V2 39117885
    894793 8ury:AA (3.1) BS03 rna 2.7.7.6 GO:0000345 ... P0A8V2 39117885
    894794 8ury:AB (3.1) BS01 dna ? GO:0001000 ... P0AFW0 39117885
    894795 8ury:AE (3.1) BS01 dna 2.7.7.6 GO:0000287 ... P0A8T7 39117885
    894796 8ury:AE (3.1) BS02 dna 2.7.7.6 GO:0000287 ... P0A8T7 39117885
    894797 8ury:AE (3.1) BS03 rna 2.7.7.6 GO:0000287 ... P0A8T7 39117885
    894798 8ury:AE (3.1) BS04 MG 2.7.7.6 GO:0000287 ... P0A8T7 39117885
    894799 8ury:AE (3.1) BS05 ZN 2.7.7.6 GO:0000287 ... P0A8T7 39117885
    894800 8ury:AE (3.1) BS06 ZN 2.7.7.6 GO:0000287 ... P0A8T7 39117885

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).