SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 4465 4466 4467 4468 4469 4470 4471 4472 4473 4474 4475 4476 4477 4478 4479 4480 4481 4482 4483 4484 4485 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    894801 8vtu:2q (2.4) BS03 MG N/A GO:0003735 ... P0DOY7 39039256
    894802 8vtu:2r (2.4) BS01 rna N/A GO:0003735 ... Q5SLQ0 39039256
    894803 8vtu:2s (2.4) BS01 rna N/A GO:0000028 ... Q5SHP2 39039256
    894804 8vtu:2t (2.4) BS01 rna N/A GO:0003723 ... P80380 39039256
    894805 8vtv:10 (2.55) BS01 rna N/A GO:0003735 ... P60493 39039256
    894806 8vtv:10 (2.55) BS02 rna N/A GO:0003735 ... P60493 39039256
    894807 8vtv:10 (2.55) BS03 rna N/A GO:0003735 ... P60493 39039256
    894808 8vtv:10 (2.55) BS04 MG N/A GO:0003735 ... P60493 39039256
    894809 8vtv:10 (2.55) BS05 MG N/A GO:0003735 ... P60493 39039256
    894810 8vtv:11 (2.55) BS01 rna N/A GO:0003735 ... P60494 39039256
    894811 8vtv:11 (2.55) BS02 rna N/A GO:0003735 ... P60494 39039256
    894812 8vtv:11 (2.55) BS03 MG N/A GO:0003735 ... P60494 39039256
    894813 8vtv:12 (2.55) BS01 rna N/A GO:0003735 ... Q5SHP6 39039256
    894814 8vtv:12 (2.55) BS02 MG N/A GO:0003735 ... Q5SHP6 39039256
    894815 8vtv:13 (2.55) BS01 rna N/A GO:0003735 ... Q5SHQ6 39039256
    894816 8vtv:13 (2.55) BS02 rna N/A GO:0003735 ... Q5SHQ6 39039256
    894817 8vtv:13 (2.55) BS03 MG N/A GO:0003735 ... Q5SHQ6 39039256
    894818 8vtv:13 (2.55) BS04 MG N/A GO:0003735 ... Q5SHQ6 39039256
    894819 8vtv:13 (2.55) BS05 MG N/A GO:0003735 ... Q5SHQ6 39039256
    894820 8vtv:13 (2.55) BS06 MG N/A GO:0003735 ... Q5SHQ6 39039256
    894821 8vtv:14 (2.55) BS01 rna N/A GO:0003735 ... Q5SJE1 39039256
    894822 8vtv:14 (2.55) BS02 ZN N/A GO:0003735 ... Q5SJE1 39039256
    894823 8vtv:15 (2.55) BS01 rna N/A GO:0003735 ... P80339 39039256
    894824 8vtv:15 (2.55) BS02 MG N/A GO:0003735 ... P80339 39039256
    894825 8vtv:15 (2.55) BS03 MG N/A GO:0003735 ... P80339 39039256
    894826 8vtv:15 (2.55) BS04 MG N/A GO:0003735 ... P80339 39039256
    894827 8vtv:15 (2.55) BS05 ZN N/A GO:0003735 ... P80339 39039256
    894828 8vtv:16 (2.55) BS01 rna N/A GO:0000049 ... P35871 39039256
    894829 8vtv:16 (2.55) BS02 MG N/A GO:0000049 ... P35871 39039256
    894830 8vtv:16 (2.55) BS03 MG N/A GO:0000049 ... P35871 39039256
    894831 8vtv:16 (2.55) BS04 ZN N/A GO:0000049 ... P35871 39039256
    894832 8vtv:17 (2.55) BS01 rna N/A GO:0003735 ... P80340 39039256
    894833 8vtv:17 (2.55) BS02 MG N/A GO:0003735 ... P80340 39039256
    894834 8vtv:17 (2.55) BS03 MG N/A GO:0003735 ... P80340 39039256
    894835 8vtv:18 (2.55) BS01 rna N/A GO:0003735 ... Q5SKU1 39039256
    894836 8vtv:18 (2.55) BS02 MG N/A GO:0003735 ... Q5SKU1 39039256
    894837 8vtv:18 (2.55) BS03 MG N/A GO:0003735 ... Q5SKU1 39039256
    894838 8vtv:19 (2.55) BS01 rna N/A GO:0003735 ... Q5SHR2 39039256
    894839 8vtv:19 (2.55) BS02 ZN N/A GO:0003735 ... Q5SHR2 39039256
    894840 8vtv:1D (2.55) BS01 rna N/A GO:0002181 ... P60405 39039256
    894841 8vtv:1D (2.55) BS02 rna N/A GO:0002181 ... P60405 39039256
    894842 8vtv:1D (2.55) BS03 MG N/A GO:0002181 ... P60405 39039256
    894843 8vtv:1D (2.55) BS04 MG N/A GO:0002181 ... P60405 39039256
    894844 8vtv:1D (2.55) BS05 MG N/A GO:0002181 ... P60405 39039256
    894845 8vtv:1D (2.55) BS06 MG N/A GO:0002181 ... P60405 39039256
    894846 8vtv:1D (2.55) BS07 MG N/A GO:0002181 ... P60405 39039256
    894847 8vtv:1D (2.55) BS08 MG N/A GO:0002181 ... P60405 39039256
    894848 8vtv:1D (2.55) BS09 MG N/A GO:0002181 ... P60405 39039256
    894849 8vtv:1D (2.55) BS10 MG N/A GO:0002181 ... P60405 39039256
    894850 8vtv:1D (2.55) BS11 MG N/A GO:0002181 ... P60405 39039256
    894851 8vtv:1D (2.55) BS12 MG N/A GO:0002181 ... P60405 39039256
    894852 8vtv:1D (2.55) BS13 MG N/A GO:0002181 ... P60405 39039256
    894853 8vtv:1E (2.55) BS01 rna N/A GO:0003735 ... Q5SHN8 39039256
    894854 8vtv:1E (2.55) BS02 MG N/A GO:0003735 ... Q5SHN8 39039256
    894855 8vtv:1E (2.55) BS03 MG N/A GO:0003735 ... Q5SHN8 39039256
    894856 8vtv:1E (2.55) BS04 MG N/A GO:0003735 ... Q5SHN8 39039256
    894857 8vtv:1E (2.55) BS05 MG N/A GO:0003735 ... Q5SHN8 39039256
    894858 8vtv:1F (2.55) BS01 rna N/A GO:0003735 ... Q5SHN9 39039256
    894859 8vtv:1F (2.55) BS02 MG N/A GO:0003735 ... Q5SHN9 39039256
    894860 8vtv:1F (2.55) BS03 MG N/A GO:0003735 ... Q5SHN9 39039256
    894861 8vtv:1F (2.55) BS04 MG N/A GO:0003735 ... Q5SHN9 39039256
    894862 8vtv:1F (2.55) BS05 MG N/A GO:0003735 ... Q5SHN9 39039256
    894863 8vtv:1F (2.55) BS06 MG N/A GO:0003735 ... Q5SHN9 39039256
    894864 8vtv:1F (2.55) BS07 MG N/A GO:0003735 ... Q5SHN9 39039256
    894865 8vtv:1F (2.55) BS08 MG N/A GO:0003735 ... Q5SHN9 39039256
    894866 8vtv:1F (2.55) BS09 MG N/A GO:0003735 ... Q5SHN9 39039256
    894867 8vtv:1F (2.55) BS10 MG N/A GO:0003735 ... Q5SHN9 39039256
    894868 8vtv:1G (2.55) BS01 rna N/A GO:0000049 ... Q5SHQ0 39039256
    894869 8vtv:1G (2.55) BS02 rna N/A GO:0000049 ... Q5SHQ0 39039256
    894870 8vtv:1G (2.55) BS03 rna N/A GO:0000049 ... Q5SHQ0 39039256
    894871 8vtv:1G (2.55) BS04 MG N/A GO:0000049 ... Q5SHQ0 39039256
    894872 8vtv:1G (2.55) BS05 MG N/A GO:0000049 ... Q5SHQ0 39039256
    894873 8vtv:1H (2.55) BS01 rna N/A GO:0002181 ... P0DOY8 39039256
    894874 8vtv:1I (2.55) BS01 rna N/A GO:0003735 ... Q5SLQ1 39039256
    894875 8vtv:1I (2.55) BS02 MG N/A GO:0003735 ... Q5SLQ1 39039256
    894876 8vtv:1N (2.55) BS01 rna N/A GO:0003729 ... P60488 39039256
    894877 8vtv:1N (2.55) BS02 MG N/A GO:0003729 ... P60488 39039256
    894878 8vtv:1N (2.55) BS03 MG N/A GO:0003729 ... P60488 39039256
    894879 8vtv:1N (2.55) BS04 MG N/A GO:0003729 ... P60488 39039256
    894880 8vtv:1N (2.55) BS05 MG N/A GO:0003729 ... P60488 39039256
    894881 8vtv:1N (2.55) BS06 MG N/A GO:0003729 ... P60488 39039256
    894882 8vtv:1O (2.55) BS01 rna N/A GO:0003735 ... Q5SHP8 39039256
    894883 8vtv:1O (2.55) BS02 rna N/A GO:0003735 ... Q5SHP8 39039256
    894884 8vtv:1O (2.55) BS03 MG N/A GO:0003735 ... Q5SHP8 39039256
    894885 8vtv:1P (2.55) BS01 rna N/A GO:0003735 ... Q5SHQ7 39039256
    894886 8vtv:1P (2.55) BS02 MG N/A GO:0003735 ... Q5SHQ7 39039256
    894887 8vtv:1P (2.55) BS03 MG N/A GO:0003735 ... Q5SHQ7 39039256
    894888 8vtv:1P (2.55) BS04 MG N/A GO:0003735 ... Q5SHQ7 39039256
    894889 8vtv:1P (2.55) BS05 MG N/A GO:0003735 ... Q5SHQ7 39039256
    894890 8vtv:1Q (2.55) BS01 rna N/A GO:0000049 ... P60489 39039256
    894891 8vtv:1Q (2.55) BS02 rna N/A GO:0000049 ... P60489 39039256
    894892 8vtv:1Q (2.55) BS03 rna N/A GO:0000049 ... P60489 39039256
    894893 8vtv:1Q (2.55) BS04 rna N/A GO:0000049 ... P60489 39039256
    894894 8vtv:1Q (2.55) BS05 MG N/A GO:0000049 ... P60489 39039256
    894895 8vtv:1Q (2.55) BS06 MG N/A GO:0000049 ... P60489 39039256
    894896 8vtv:1Q (2.55) BS07 MG N/A GO:0000049 ... P60489 39039256
    894897 8vtv:1Q (2.55) BS08 MG N/A GO:0000049 ... P60489 39039256
    894898 8vtv:1Q (2.55) BS09 MG N/A GO:0000049 ... P60489 39039256
    894899 8vtv:1R (2.55) BS01 rna N/A GO:0003735 ... Q9Z9H5 39039256
    894900 8vtv:1R (2.55) BS02 MG N/A GO:0003735 ... Q9Z9H5 39039256
    894901 8vtv:1S (2.55) BS01 rna N/A GO:0003735 ... Q5SHQ4 39039256
    894902 8vtv:1S (2.55) BS02 rna N/A GO:0003735 ... Q5SHQ4 39039256
    894903 8vtv:1S (2.55) BS03 MG N/A GO:0003735 ... Q5SHQ4 39039256
    894904 8vtv:1S (2.55) BS04 MG N/A GO:0003735 ... Q5SHQ4 39039256
    894905 8vtv:1T (2.55) BS01 rna N/A GO:0003735 ... P60490 39039256
    894906 8vtv:1T (2.55) BS02 rna N/A GO:0003735 ... P60490 39039256
    894907 8vtv:1U (2.55) BS01 rna N/A GO:0000027 ... P60491 39039256
    894908 8vtv:1U (2.55) BS02 MG N/A GO:0000027 ... P60491 39039256
    894909 8vtv:1U (2.55) BS03 MG N/A GO:0000027 ... P60491 39039256
    894910 8vtv:1U (2.55) BS04 MG N/A GO:0000027 ... P60491 39039256
    894911 8vtv:1U (2.55) BS05 MG N/A GO:0000027 ... P60491 39039256
    894912 8vtv:1U (2.55) BS06 MG N/A GO:0000027 ... P60491 39039256
    894913 8vtv:1U (2.55) BS07 MG N/A GO:0000027 ... P60491 39039256
    894914 8vtv:1V (2.55) BS01 rna N/A GO:0003723 ... P60492 39039256
    894915 8vtv:1V (2.55) BS02 MG N/A GO:0003723 ... P60492 39039256
    894916 8vtv:1V (2.55) BS03 MG N/A GO:0003723 ... P60492 39039256
    894917 8vtv:1V (2.55) BS04 MG N/A GO:0003723 ... P60492 39039256
    894918 8vtv:1V (2.55) BS05 MG N/A GO:0003723 ... P60492 39039256
    894919 8vtv:1V (2.55) BS06 MG N/A GO:0003723 ... P60492 39039256
    894920 8vtv:1W (2.55) BS01 rna N/A GO:0003735 ... Q5SHP3 39039256
    894921 8vtv:1W (2.55) BS02 MG N/A GO:0003735 ... Q5SHP3 39039256
    894922 8vtv:1W (2.55) BS03 MG N/A GO:0003735 ... Q5SHP3 39039256
    894923 8vtv:1W (2.55) BS04 MG N/A GO:0003735 ... Q5SHP3 39039256
    894924 8vtv:1W (2.55) BS05 MG N/A GO:0003735 ... Q5SHP3 39039256
    894925 8vtv:1W (2.55) BS06 MG N/A GO:0003735 ... Q5SHP3 39039256
    894926 8vtv:1W (2.55) BS07 MG N/A GO:0003735 ... Q5SHP3 39039256
    894927 8vtv:1X (2.55) BS01 rna N/A GO:0003735 ... Q5SHP0 39039256
    894928 8vtv:1X (2.55) BS02 MG N/A GO:0003735 ... Q5SHP0 39039256
    894929 8vtv:1X (2.55) BS03 MG N/A GO:0003735 ... Q5SHP0 39039256
    894930 8vtv:1X (2.55) BS04 MG N/A GO:0003735 ... Q5SHP0 39039256
    894931 8vtv:1X (2.55) BS05 MG N/A GO:0003735 ... Q5SHP0 39039256
    894932 8vtv:1X (2.55) BS06 MG N/A GO:0003735 ... Q5SHP0 39039256
    894933 8vtv:1Y (2.55) BS01 rna N/A GO:0003723 ... Q5SHP9 39039256
    894934 8vtv:1Y (2.55) BS02 MG N/A GO:0003723 ... Q5SHP9 39039256
    894935 8vtv:1Y (2.55) BS03 ZN N/A GO:0003723 ... Q5SHP9 39039256
    894936 8vtv:1Z (2.55) BS01 rna N/A GO:0003723 ... Q5SHZ1 39039256
    894937 8vtv:1Z (2.55) BS02 rna N/A GO:0003723 ... Q5SHZ1 39039256
    894938 8vtv:1b (2.55) BS01 rna N/A GO:0003735 ... P80371 39039256
    894939 8vtv:1c (2.55) BS01 rna N/A GO:0003676 ... P80372 39039256
    894940 8vtv:1d (2.55) BS01 rna N/A GO:0003723 ... P80373 39039256
    894941 8vtv:1d (2.55) BS02 SF4 N/A GO:0003723 ... P80373 39039256
    894942 8vtv:1e (2.55) BS01 rna N/A GO:0003723 ... Q5SHQ5 39039256
    894943 8vtv:1e (2.55) BS02 MG N/A GO:0003723 ... Q5SHQ5 39039256
    894944 8vtv:1e (2.55) BS03 MG N/A GO:0003723 ... Q5SHQ5 39039256
    894945 8vtv:1f (2.55) BS01 rna N/A GO:0003735 ... Q5SLP8 39039256
    894946 8vtv:1g (2.55) BS01 rna N/A GO:0000049 ... P17291 39039256
    894947 8vtv:1g (2.55) BS02 rna N/A GO:0000049 ... P17291 39039256
    894948 8vtv:1h (2.55) BS01 rna N/A GO:0003735 ... P0DOY9 39039256
    894949 8vtv:1i (2.55) BS01 rna N/A GO:0000049 ... P80374 39039256
    894950 8vtv:1i (2.55) BS02 rna N/A GO:0000049 ... P80374 39039256
    894951 8vtv:1j (2.55) BS01 rna N/A GO:0000049 ... Q5SHN7 39039256
    894952 8vtv:1k (2.55) BS01 rna N/A GO:0003735 ... P80376 39039256
    894953 8vtv:1k (2.55) BS02 MG N/A GO:0003735 ... P80376 39039256
    894954 8vtv:1l (2.55) BS01 rna N/A GO:0000049 ... Q5SHN3 39039256
    894955 8vtv:1l (2.55) BS02 rna N/A GO:0000049 ... Q5SHN3 39039256
    894956 8vtv:1l (2.55) BS03 MG N/A GO:0000049 ... Q5SHN3 39039256
    894957 8vtv:1m (2.55) BS01 rna N/A GO:0000049 ... P80377 39039256
    894958 8vtv:1m (2.55) BS02 rna N/A GO:0000049 ... P80377 39039256
    894959 8vtv:1m (2.55) BS03 MG N/A GO:0000049 ... P80377 39039256
    894960 8vtv:1n (2.55) BS01 rna N/A GO:0003735 ... P0DOY6 39039256
    894961 8vtv:1n (2.55) BS02 ZN N/A GO:0003735 ... P0DOY6 39039256
    894962 8vtv:1o (2.55) BS01 rna N/A GO:0003735 ... Q5SJ76 39039256
    894963 8vtv:1o (2.55) BS02 rna N/A GO:0003735 ... Q5SJ76 39039256
    894964 8vtv:1p (2.55) BS01 rna N/A GO:0003735 ... Q5SJH3 39039256
    894965 8vtv:1q (2.55) BS01 rna N/A GO:0003735 ... P0DOY7 39039256
    894966 8vtv:1r (2.55) BS01 rna N/A GO:0003735 ... Q5SLQ0 39039256
    894967 8vtv:1s (2.55) BS01 rna N/A GO:0000028 ... Q5SHP2 39039256
    894968 8vtv:1t (2.55) BS01 rna N/A GO:0003723 ... P80380 39039256
    894969 8vtv:1t (2.55) BS02 MG N/A GO:0003723 ... P80380 39039256
    894970 8vtv:20 (2.55) BS01 rna N/A GO:0003735 ... P60493 39039256
    894971 8vtv:20 (2.55) BS02 rna N/A GO:0003735 ... P60493 39039256
    894972 8vtv:21 (2.55) BS01 rna N/A GO:0003735 ... P60494 39039256
    894973 8vtv:21 (2.55) BS02 rna N/A GO:0003735 ... P60494 39039256
    894974 8vtv:21 (2.55) BS03 MG N/A GO:0003735 ... P60494 39039256
    894975 8vtv:22 (2.55) BS01 rna N/A GO:0003735 ... Q5SHP6 39039256
    894976 8vtv:23 (2.55) BS01 rna N/A GO:0003735 ... Q5SHQ6 39039256
    894977 8vtv:23 (2.55) BS02 MG N/A GO:0003735 ... Q5SHQ6 39039256
    894978 8vtv:24 (2.55) BS01 rna N/A GO:0003735 ... Q5SJE1 39039256
    894979 8vtv:24 (2.55) BS02 ZN N/A GO:0003735 ... Q5SJE1 39039256
    894980 8vtv:25 (2.55) BS01 rna N/A GO:0003735 ... P80339 39039256
    894981 8vtv:25 (2.55) BS02 MG N/A GO:0003735 ... P80339 39039256
    894982 8vtv:25 (2.55) BS03 ZN N/A GO:0003735 ... P80339 39039256
    894983 8vtv:26 (2.55) BS01 rna N/A GO:0000049 ... P35871 39039256
    894984 8vtv:26 (2.55) BS02 MG N/A GO:0000049 ... P35871 39039256
    894985 8vtv:26 (2.55) BS03 ZN N/A GO:0000049 ... P35871 39039256
    894986 8vtv:27 (2.55) BS01 rna N/A GO:0003735 ... P80340 39039256
    894987 8vtv:27 (2.55) BS02 MG N/A GO:0003735 ... P80340 39039256
    894988 8vtv:28 (2.55) BS01 rna N/A GO:0003735 ... Q5SKU1 39039256
    894989 8vtv:28 (2.55) BS02 MG N/A GO:0003735 ... Q5SKU1 39039256
    894990 8vtv:29 (2.55) BS01 rna N/A GO:0003735 ... Q5SHR2 39039256
    894991 8vtv:29 (2.55) BS02 MG N/A GO:0003735 ... Q5SHR2 39039256
    894992 8vtv:29 (2.55) BS03 ZN N/A GO:0003735 ... Q5SHR2 39039256
    894993 8vtv:2D (2.55) BS01 rna N/A GO:0002181 ... P60405 39039256
    894994 8vtv:2D (2.55) BS02 rna N/A GO:0002181 ... P60405 39039256
    894995 8vtv:2D (2.55) BS03 MG N/A GO:0002181 ... P60405 39039256
    894996 8vtv:2D (2.55) BS04 MG N/A GO:0002181 ... P60405 39039256
    894997 8vtv:2D (2.55) BS05 MG N/A GO:0002181 ... P60405 39039256
    894998 8vtv:2E (2.55) BS01 rna N/A GO:0003735 ... Q5SHN8 39039256
    894999 8vtv:2E (2.55) BS02 MG N/A GO:0003735 ... Q5SHN8 39039256
    895000 8vtv:2F (2.55) BS01 rna N/A GO:0003735 ... Q5SHN9 39039256

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).