SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    895001 8vtv:2F (2.55) BS02 MG N/A GO:0003735 ... Q5SHN9 39039256
    895002 8vtv:2F (2.55) BS03 MG N/A GO:0003735 ... Q5SHN9 39039256
    895003 8vtv:2F (2.55) BS04 MG N/A GO:0003735 ... Q5SHN9 39039256
    895004 8vtv:2F (2.55) BS05 MG N/A GO:0003735 ... Q5SHN9 39039256
    895005 8vtv:2G (2.55) BS01 rna N/A GO:0000049 ... Q5SHQ0 39039256
    895006 8vtv:2G (2.55) BS02 rna N/A GO:0000049 ... Q5SHQ0 39039256
    895007 8vtv:2G (2.55) BS03 rna N/A GO:0000049 ... Q5SHQ0 39039256
    895008 8vtv:2G (2.55) BS04 MG N/A GO:0000049 ... Q5SHQ0 39039256
    895009 8vtv:2H (2.55) BS01 rna N/A GO:0002181 ... P0DOY8 39039256
    895010 8vtv:2I (2.55) BS01 rna N/A GO:0003735 ... Q5SLQ1 39039256
    895011 8vtv:2N (2.55) BS01 rna N/A GO:0003729 ... P60488 39039256
    895012 8vtv:2O (2.55) BS01 rna N/A GO:0003735 ... Q5SHP8 39039256
    895013 8vtv:2O (2.55) BS02 rna N/A GO:0003735 ... Q5SHP8 39039256
    895014 8vtv:2P (2.55) BS01 rna N/A GO:0003735 ... Q5SHQ7 39039256
    895015 8vtv:2Q (2.55) BS01 rna N/A GO:0000049 ... P60489 39039256
    895016 8vtv:2Q (2.55) BS02 rna N/A GO:0000049 ... P60489 39039256
    895017 8vtv:2Q (2.55) BS03 rna N/A GO:0000049 ... P60489 39039256
    895018 8vtv:2Q (2.55) BS04 rna N/A GO:0000049 ... P60489 39039256
    895019 8vtv:2Q (2.55) BS05 MG N/A GO:0000049 ... P60489 39039256
    895020 8vtv:2R (2.55) BS01 rna N/A GO:0003735 ... Q9Z9H5 39039256
    895021 8vtv:2S (2.55) BS01 rna N/A GO:0003735 ... Q5SHQ4 39039256
    895022 8vtv:2S (2.55) BS02 rna N/A GO:0003735 ... Q5SHQ4 39039256
    895023 8vtv:2T (2.55) BS01 rna N/A GO:0003735 ... P60490 39039256
    895024 8vtv:2T (2.55) BS02 rna N/A GO:0003735 ... P60490 39039256
    895025 8vtv:2T (2.55) BS03 MG N/A GO:0003735 ... P60490 39039256
    895026 8vtv:2U (2.55) BS01 rna N/A GO:0000027 ... P60491 39039256
    895027 8vtv:2U (2.55) BS02 MG N/A GO:0000027 ... P60491 39039256
    895028 8vtv:2V (2.55) BS01 rna N/A GO:0003723 ... P60492 39039256
    895029 8vtv:2V (2.55) BS02 MG N/A GO:0003723 ... P60492 39039256
    895030 8vtv:2W (2.55) BS01 rna N/A GO:0003735 ... Q5SHP3 39039256
    895031 8vtv:2W (2.55) BS02 MG N/A GO:0003735 ... Q5SHP3 39039256
    895032 8vtv:2W (2.55) BS03 MG N/A GO:0003735 ... Q5SHP3 39039256
    895033 8vtv:2X (2.55) BS01 rna N/A GO:0003735 ... Q5SHP0 39039256
    895034 8vtv:2X (2.55) BS02 MG N/A GO:0003735 ... Q5SHP0 39039256
    895035 8vtv:2Y (2.55) BS01 rna N/A GO:0003723 ... Q5SHP9 39039256
    895036 8vtv:2Y (2.55) BS02 ZN N/A GO:0003723 ... Q5SHP9 39039256
    895037 8vtv:2Z (2.55) BS01 rna N/A GO:0003723 ... Q5SHZ1 39039256
    895038 8vtv:2Z (2.55) BS02 rna N/A GO:0003723 ... Q5SHZ1 39039256
    895039 8vtv:2Z (2.55) BS03 MG N/A GO:0003723 ... Q5SHZ1 39039256
    895040 8vtv:2b (2.55) BS01 rna N/A GO:0003735 ... P80371 39039256
    895041 8vtv:2c (2.55) BS01 rna N/A GO:0003676 ... P80372 39039256
    895042 8vtv:2d (2.55) BS01 rna N/A GO:0003723 ... P80373 39039256
    895043 8vtv:2d (2.55) BS02 MG N/A GO:0003723 ... P80373 39039256
    895044 8vtv:2d (2.55) BS03 SF4 N/A GO:0003723 ... P80373 39039256
    895045 8vtv:2e (2.55) BS01 rna N/A GO:0003723 ... Q5SHQ5 39039256
    895046 8vtv:2e (2.55) BS02 MG N/A GO:0003723 ... Q5SHQ5 39039256
    895047 8vtv:2f (2.55) BS01 rna N/A GO:0003735 ... Q5SLP8 39039256
    895048 8vtv:2f (2.55) BS02 MG N/A GO:0003735 ... Q5SLP8 39039256
    895049 8vtv:2g (2.55) BS01 rna N/A GO:0000049 ... P17291 39039256
    895050 8vtv:2g (2.55) BS02 rna N/A GO:0000049 ... P17291 39039256
    895051 8vtv:2h (2.55) BS01 rna N/A GO:0003735 ... P0DOY9 39039256
    895052 8vtv:2i (2.55) BS01 rna N/A GO:0000049 ... P80374 39039256
    895053 8vtv:2i (2.55) BS02 rna N/A GO:0000049 ... P80374 39039256
    895054 8vtv:2j (2.55) BS01 rna N/A GO:0000049 ... Q5SHN7 39039256
    895055 8vtv:2k (2.55) BS01 rna N/A GO:0003735 ... P80376 39039256
    895056 8vtv:2k (2.55) BS02 MG N/A GO:0003735 ... P80376 39039256
    895057 8vtv:2l (2.55) BS01 rna N/A GO:0000049 ... Q5SHN3 39039256
    895058 8vtv:2l (2.55) BS02 MG N/A GO:0000049 ... Q5SHN3 39039256
    895059 8vtv:2l (2.55) BS03 MG N/A GO:0000049 ... Q5SHN3 39039256
    895060 8vtv:2m (2.55) BS01 rna N/A GO:0000049 ... P80377 39039256
    895061 8vtv:2m (2.55) BS02 rna N/A GO:0000049 ... P80377 39039256
    895062 8vtv:2n (2.55) BS01 rna N/A GO:0003735 ... P0DOY6 39039256
    895063 8vtv:2n (2.55) BS02 ZN N/A GO:0003735 ... P0DOY6 39039256
    895064 8vtv:2o (2.55) BS01 rna N/A GO:0003735 ... Q5SJ76 39039256
    895065 8vtv:2o (2.55) BS02 rna N/A GO:0003735 ... Q5SJ76 39039256
    895066 8vtv:2p (2.55) BS01 rna N/A GO:0003735 ... Q5SJH3 39039256
    895067 8vtv:2q (2.55) BS01 rna N/A GO:0003735 ... P0DOY7 39039256
    895068 8vtv:2q (2.55) BS02 MG N/A GO:0003735 ... P0DOY7 39039256
    895069 8vtv:2q (2.55) BS03 MG N/A GO:0003735 ... P0DOY7 39039256
    895070 8vtv:2r (2.55) BS01 rna N/A GO:0003735 ... Q5SLQ0 39039256
    895071 8vtv:2s (2.55) BS01 rna N/A GO:0000028 ... Q5SHP2 39039256
    895072 8vtv:2t (2.55) BS01 rna N/A GO:0003723 ... P80380 39039256
    895073 8vtw:10 (2.35) BS01 rna N/A GO:0003735 ... P60493 39039256
    895074 8vtw:10 (2.35) BS02 rna N/A GO:0003735 ... P60493 39039256
    895075 8vtw:10 (2.35) BS03 MG N/A GO:0003735 ... P60493 39039256
    895076 8vtw:10 (2.35) BS04 MG N/A GO:0003735 ... P60493 39039256
    895077 8vtw:10 (2.35) BS05 MG N/A GO:0003735 ... P60493 39039256
    895078 8vtw:11 (2.35) BS01 rna N/A GO:0003735 ... P60494 39039256
    895079 8vtw:11 (2.35) BS02 MG N/A GO:0003735 ... P60494 39039256
    895080 8vtw:12 (2.35) BS01 rna N/A GO:0003735 ... Q5SHP6 39039256
    895081 8vtw:13 (2.35) BS01 rna N/A GO:0003735 ... Q5SHQ6 39039256
    895082 8vtw:13 (2.35) BS02 rna N/A GO:0003735 ... Q5SHQ6 39039256
    895083 8vtw:13 (2.35) BS03 MG N/A GO:0003735 ... Q5SHQ6 39039256
    895084 8vtw:13 (2.35) BS04 MG N/A GO:0003735 ... Q5SHQ6 39039256
    895085 8vtw:14 (2.35) BS01 rna N/A GO:0003735 ... Q5SJE1 39039256
    895086 8vtw:14 (2.35) BS02 ZN N/A GO:0003735 ... Q5SJE1 39039256
    895087 8vtw:15 (2.35) BS01 rna N/A GO:0003735 ... P80339 39039256
    895088 8vtw:15 (2.35) BS02 MG N/A GO:0003735 ... P80339 39039256
    895089 8vtw:15 (2.35) BS03 MG N/A GO:0003735 ... P80339 39039256
    895090 8vtw:15 (2.35) BS04 ZN N/A GO:0003735 ... P80339 39039256
    895091 8vtw:16 (2.35) BS01 rna N/A GO:0000049 ... P35871 39039256
    895092 8vtw:16 (2.35) BS02 ZN N/A GO:0000049 ... P35871 39039256
    895093 8vtw:17 (2.35) BS01 rna N/A GO:0003735 ... P80340 39039256
    895094 8vtw:17 (2.35) BS02 MG N/A GO:0003735 ... P80340 39039256
    895095 8vtw:17 (2.35) BS03 MG N/A GO:0003735 ... P80340 39039256
    895096 8vtw:18 (2.35) BS01 rna N/A GO:0003735 ... Q5SKU1 39039256
    895097 8vtw:18 (2.35) BS02 MG N/A GO:0003735 ... Q5SKU1 39039256
    895098 8vtw:18 (2.35) BS03 MG N/A GO:0003735 ... Q5SKU1 39039256
    895099 8vtw:19 (2.35) BS01 rna N/A GO:0003735 ... Q5SHR2 39039256
    895100 8vtw:19 (2.35) BS02 ZN N/A GO:0003735 ... Q5SHR2 39039256
    895101 8vtw:1D (2.35) BS01 rna N/A GO:0002181 ... P60405 39039256
    895102 8vtw:1D (2.35) BS02 rna N/A GO:0002181 ... P60405 39039256
    895103 8vtw:1D (2.35) BS03 MG N/A GO:0002181 ... P60405 39039256
    895104 8vtw:1D (2.35) BS04 MG N/A GO:0002181 ... P60405 39039256
    895105 8vtw:1D (2.35) BS05 MG N/A GO:0002181 ... P60405 39039256
    895106 8vtw:1D (2.35) BS06 MG N/A GO:0002181 ... P60405 39039256
    895107 8vtw:1D (2.35) BS07 MG N/A GO:0002181 ... P60405 39039256
    895108 8vtw:1D (2.35) BS08 MG N/A GO:0002181 ... P60405 39039256
    895109 8vtw:1D (2.35) BS09 MG N/A GO:0002181 ... P60405 39039256
    895110 8vtw:1D (2.35) BS10 MG N/A GO:0002181 ... P60405 39039256
    895111 8vtw:1D (2.35) BS11 MG N/A GO:0002181 ... P60405 39039256
    895112 8vtw:1D (2.35) BS12 MG N/A GO:0002181 ... P60405 39039256
    895113 8vtw:1E (2.35) BS01 rna N/A GO:0003735 ... Q5SHN8 39039256
    895114 8vtw:1E (2.35) BS02 MG N/A GO:0003735 ... Q5SHN8 39039256
    895115 8vtw:1E (2.35) BS03 MG N/A GO:0003735 ... Q5SHN8 39039256
    895116 8vtw:1E (2.35) BS04 MG N/A GO:0003735 ... Q5SHN8 39039256
    895117 8vtw:1E (2.35) BS05 MG N/A GO:0003735 ... Q5SHN8 39039256
    895118 8vtw:1F (2.35) BS01 rna N/A GO:0003735 ... Q5SHN9 39039256
    895119 8vtw:1F (2.35) BS02 MG N/A GO:0003735 ... Q5SHN9 39039256
    895120 8vtw:1F (2.35) BS03 MG N/A GO:0003735 ... Q5SHN9 39039256
    895121 8vtw:1F (2.35) BS04 MG N/A GO:0003735 ... Q5SHN9 39039256
    895122 8vtw:1F (2.35) BS05 MG N/A GO:0003735 ... Q5SHN9 39039256
    895123 8vtw:1F (2.35) BS06 ARG N/A GO:0003735 ... Q5SHN9 39039256
    895124 8vtw:1F (2.35) BS07 MG N/A GO:0003735 ... Q5SHN9 39039256
    895125 8vtw:1F (2.35) BS08 MG N/A GO:0003735 ... Q5SHN9 39039256
    895126 8vtw:1F (2.35) BS09 MG N/A GO:0003735 ... Q5SHN9 39039256
    895127 8vtw:1F (2.35) BS10 MG N/A GO:0003735 ... Q5SHN9 39039256
    895128 8vtw:1F (2.35) BS11 MG N/A GO:0003735 ... Q5SHN9 39039256
    895129 8vtw:1F (2.35) BS12 MG N/A GO:0003735 ... Q5SHN9 39039256
    895130 8vtw:1F (2.35) BS13 MG N/A GO:0003735 ... Q5SHN9 39039256
    895131 8vtw:1F (2.35) BS14 MG N/A GO:0003735 ... Q5SHN9 39039256
    895132 8vtw:1F (2.35) BS15 MG N/A GO:0003735 ... Q5SHN9 39039256
    895133 8vtw:1G (2.35) BS01 rna N/A GO:0000049 ... Q5SHQ0 39039256
    895134 8vtw:1G (2.35) BS02 rna N/A GO:0000049 ... Q5SHQ0 39039256
    895135 8vtw:1G (2.35) BS03 MG N/A GO:0000049 ... Q5SHQ0 39039256
    895136 8vtw:1G (2.35) BS04 MG N/A GO:0000049 ... Q5SHQ0 39039256
    895137 8vtw:1G (2.35) BS05 MG N/A GO:0000049 ... Q5SHQ0 39039256
    895138 8vtw:1H (2.35) BS01 rna N/A GO:0002181 ... P0DOY8 39039256
    895139 8vtw:1I (2.35) BS01 rna N/A GO:0003735 ... Q5SLQ1 39039256
    895140 8vtw:1N (2.35) BS01 rna N/A GO:0003729 ... P60488 39039256
    895141 8vtw:1N (2.35) BS02 MG N/A GO:0003729 ... P60488 39039256
    895142 8vtw:1N (2.35) BS03 MG N/A GO:0003729 ... P60488 39039256
    895143 8vtw:1O (2.35) BS01 rna N/A GO:0003735 ... Q5SHP8 39039256
    895144 8vtw:1O (2.35) BS02 rna N/A GO:0003735 ... Q5SHP8 39039256
    895145 8vtw:1P (2.35) BS01 rna N/A GO:0003735 ... Q5SHQ7 39039256
    895146 8vtw:1P (2.35) BS02 MG N/A GO:0003735 ... Q5SHQ7 39039256
    895147 8vtw:1P (2.35) BS03 MG N/A GO:0003735 ... Q5SHQ7 39039256
    895148 8vtw:1Q (2.35) BS01 rna N/A GO:0000049 ... P60489 39039256
    895149 8vtw:1Q (2.35) BS02 rna N/A GO:0000049 ... P60489 39039256
    895150 8vtw:1Q (2.35) BS03 MG N/A GO:0000049 ... P60489 39039256
    895151 8vtw:1Q (2.35) BS04 MG N/A GO:0000049 ... P60489 39039256
    895152 8vtw:1Q (2.35) BS05 MG N/A GO:0000049 ... P60489 39039256
    895153 8vtw:1Q (2.35) BS06 MG N/A GO:0000049 ... P60489 39039256
    895154 8vtw:1R (2.35) BS01 rna N/A GO:0003735 ... Q9Z9H5 39039256
    895155 8vtw:1R (2.35) BS02 MG N/A GO:0003735 ... Q9Z9H5 39039256
    895156 8vtw:1R (2.35) BS03 MG N/A GO:0003735 ... Q9Z9H5 39039256
    895157 8vtw:1R (2.35) BS04 MG N/A GO:0003735 ... Q9Z9H5 39039256
    895158 8vtw:1S (2.35) BS01 rna N/A GO:0003735 ... Q5SHQ4 39039256
    895159 8vtw:1S (2.35) BS02 rna N/A GO:0003735 ... Q5SHQ4 39039256
    895160 8vtw:1T (2.35) BS01 rna N/A GO:0003735 ... P60490 39039256
    895161 8vtw:1T (2.35) BS02 rna N/A GO:0003735 ... P60490 39039256
    895162 8vtw:1U (2.35) BS01 rna N/A GO:0000027 ... P60491 39039256
    895163 8vtw:1U (2.35) BS02 MG N/A GO:0000027 ... P60491 39039256
    895164 8vtw:1U (2.35) BS03 MG N/A GO:0000027 ... P60491 39039256
    895165 8vtw:1U (2.35) BS04 MG N/A GO:0000027 ... P60491 39039256
    895166 8vtw:1U (2.35) BS05 MG N/A GO:0000027 ... P60491 39039256
    895167 8vtw:1V (2.35) BS01 rna N/A GO:0003723 ... P60492 39039256
    895168 8vtw:1V (2.35) BS02 MG N/A GO:0003723 ... P60492 39039256
    895169 8vtw:1V (2.35) BS03 MG N/A GO:0003723 ... P60492 39039256
    895170 8vtw:1V (2.35) BS04 MG N/A GO:0003723 ... P60492 39039256
    895171 8vtw:1V (2.35) BS05 MG N/A GO:0003723 ... P60492 39039256
    895172 8vtw:1W (2.35) BS01 rna N/A GO:0003735 ... Q5SHP3 39039256
    895173 8vtw:1W (2.35) BS02 MG N/A GO:0003735 ... Q5SHP3 39039256
    895174 8vtw:1X (2.35) BS01 rna N/A GO:0003735 ... Q5SHP0 39039256
    895175 8vtw:1Y (2.35) BS01 rna N/A GO:0003723 ... Q5SHP9 39039256
    895176 8vtw:1Y (2.35) BS02 ZN N/A GO:0003723 ... Q5SHP9 39039256
    895177 8vtw:1Z (2.35) BS01 rna N/A GO:0003723 ... Q5SHZ1 39039256
    895178 8vtw:1Z (2.35) BS02 rna N/A GO:0003723 ... Q5SHZ1 39039256
    895179 8vtw:1b (2.35) BS01 rna N/A GO:0003735 ... P80371 39039256
    895180 8vtw:1b (2.35) BS02 MG N/A GO:0003735 ... P80371 39039256
    895181 8vtw:1c (2.35) BS01 rna N/A GO:0003676 ... P80372 39039256
    895182 8vtw:1d (2.35) BS01 rna N/A GO:0003723 ... P80373 39039256
    895183 8vtw:1d (2.35) BS02 MG N/A GO:0003723 ... P80373 39039256
    895184 8vtw:1d (2.35) BS03 SF4 N/A GO:0003723 ... P80373 39039256
    895185 8vtw:1e (2.35) BS01 rna N/A GO:0003723 ... Q5SHQ5 39039256
    895186 8vtw:1e (2.35) BS02 MG N/A GO:0003723 ... Q5SHQ5 39039256
    895187 8vtw:1f (2.35) BS01 rna N/A GO:0003735 ... Q5SLP8 39039256
    895188 8vtw:1f (2.35) BS02 MG N/A GO:0003735 ... Q5SLP8 39039256
    895189 8vtw:1g (2.35) BS01 rna N/A GO:0000049 ... P17291 39039256
    895190 8vtw:1h (2.35) BS01 rna N/A GO:0003735 ... P0DOY9 39039256
    895191 8vtw:1i (2.35) BS01 rna N/A GO:0000049 ... P80374 39039256
    895192 8vtw:1j (2.35) BS01 rna N/A GO:0000049 ... Q5SHN7 39039256
    895193 8vtw:1k (2.35) BS01 rna N/A GO:0003735 ... P80376 39039256
    895194 8vtw:1k (2.35) BS02 MG N/A GO:0003735 ... P80376 39039256
    895195 8vtw:1l (2.35) BS01 rna N/A GO:0000049 ... Q5SHN3 39039256
    895196 8vtw:1l (2.35) BS02 MG N/A GO:0000049 ... Q5SHN3 39039256
    895197 8vtw:1m (2.35) BS01 rna N/A GO:0000049 ... P80377 39039256
    895198 8vtw:1m (2.35) BS02 rna N/A GO:0000049 ... P80377 39039256
    895199 8vtw:1m (2.35) BS03 MG N/A GO:0000049 ... P80377 39039256
    895200 8vtw:1n (2.35) BS01 rna N/A GO:0003735 ... P0DOY6 39039256

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).