SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    895201 8vtw:1n (2.35) BS02 ZN N/A GO:0003735 ... P0DOY6 39039256
    895202 8vtw:1o (2.35) BS01 rna N/A GO:0003735 ... Q5SJ76 39039256
    895203 8vtw:1o (2.35) BS02 rna N/A GO:0003735 ... Q5SJ76 39039256
    895204 8vtw:1p (2.35) BS01 rna N/A GO:0003735 ... Q5SJH3 39039256
    895205 8vtw:1q (2.35) BS01 rna N/A GO:0003735 ... P0DOY7 39039256
    895206 8vtw:1r (2.35) BS01 rna N/A GO:0003735 ... Q5SLQ0 39039256
    895207 8vtw:1s (2.35) BS01 rna N/A GO:0000028 ... Q5SHP2 39039256
    895208 8vtw:1t (2.35) BS01 rna N/A GO:0003723 ... P80380 39039256
    895209 8vtw:1t (2.35) BS02 MG N/A GO:0003723 ... P80380 39039256
    895210 8vtw:1y (2.35) BS01 rna N/A GO:0005515 ... P0AD49 39039256
    895211 8vtw:1y (2.35) BS02 MG N/A GO:0005515 ... P0AD49 39039256
    895212 8vtw:20 (2.35) BS01 rna N/A GO:0003735 ... P60493 39039256
    895213 8vtw:20 (2.35) BS02 rna N/A GO:0003735 ... P60493 39039256
    895214 8vtw:20 (2.35) BS03 MG N/A GO:0003735 ... P60493 39039256
    895215 8vtw:21 (2.35) BS01 rna N/A GO:0003735 ... P60494 39039256
    895216 8vtw:22 (2.35) BS01 rna N/A GO:0003735 ... Q5SHP6 39039256
    895217 8vtw:23 (2.35) BS01 rna N/A GO:0003735 ... Q5SHQ6 39039256
    895218 8vtw:23 (2.35) BS02 rna N/A GO:0003735 ... Q5SHQ6 39039256
    895219 8vtw:23 (2.35) BS03 MG N/A GO:0003735 ... Q5SHQ6 39039256
    895220 8vtw:24 (2.35) BS01 rna N/A GO:0003735 ... Q5SJE1 39039256
    895221 8vtw:24 (2.35) BS02 ZN N/A GO:0003735 ... Q5SJE1 39039256
    895222 8vtw:25 (2.35) BS01 rna N/A GO:0003735 ... P80339 39039256
    895223 8vtw:25 (2.35) BS02 MG N/A GO:0003735 ... P80339 39039256
    895224 8vtw:25 (2.35) BS03 ZN N/A GO:0003735 ... P80339 39039256
    895225 8vtw:26 (2.35) BS01 rna N/A GO:0000049 ... P35871 39039256
    895226 8vtw:26 (2.35) BS02 MG N/A GO:0000049 ... P35871 39039256
    895227 8vtw:26 (2.35) BS03 ZN N/A GO:0000049 ... P35871 39039256
    895228 8vtw:27 (2.35) BS01 rna N/A GO:0003735 ... P80340 39039256
    895229 8vtw:27 (2.35) BS02 MG N/A GO:0003735 ... P80340 39039256
    895230 8vtw:27 (2.35) BS03 MG N/A GO:0003735 ... P80340 39039256
    895231 8vtw:27 (2.35) BS04 MG N/A GO:0003735 ... P80340 39039256
    895232 8vtw:28 (2.35) BS01 rna N/A GO:0003735 ... Q5SKU1 39039256
    895233 8vtw:29 (2.35) BS01 rna N/A GO:0003735 ... Q5SHR2 39039256
    895234 8vtw:29 (2.35) BS02 ZN N/A GO:0003735 ... Q5SHR2 39039256
    895235 8vtw:2D (2.35) BS01 rna N/A GO:0002181 ... P60405 39039256
    895236 8vtw:2D (2.35) BS02 MG N/A GO:0002181 ... P60405 39039256
    895237 8vtw:2D (2.35) BS03 MG N/A GO:0002181 ... P60405 39039256
    895238 8vtw:2D (2.35) BS04 MG N/A GO:0002181 ... P60405 39039256
    895239 8vtw:2D (2.35) BS05 MG N/A GO:0002181 ... P60405 39039256
    895240 8vtw:2D (2.35) BS06 MG N/A GO:0002181 ... P60405 39039256
    895241 8vtw:2D (2.35) BS07 MG N/A GO:0002181 ... P60405 39039256
    895242 8vtw:2E (2.35) BS01 rna N/A GO:0003735 ... Q5SHN8 39039256
    895243 8vtw:2E (2.35) BS02 MG N/A GO:0003735 ... Q5SHN8 39039256
    895244 8vtw:2E (2.35) BS03 MG N/A GO:0003735 ... Q5SHN8 39039256
    895245 8vtw:2F (2.35) BS01 rna N/A GO:0003735 ... Q5SHN9 39039256
    895246 8vtw:2F (2.35) BS02 MG N/A GO:0003735 ... Q5SHN9 39039256
    895247 8vtw:2F (2.35) BS03 MG N/A GO:0003735 ... Q5SHN9 39039256
    895248 8vtw:2F (2.35) BS04 MG N/A GO:0003735 ... Q5SHN9 39039256
    895249 8vtw:2F (2.35) BS05 MG N/A GO:0003735 ... Q5SHN9 39039256
    895250 8vtw:2G (2.35) BS01 rna N/A GO:0000049 ... Q5SHQ0 39039256
    895251 8vtw:2G (2.35) BS02 rna N/A GO:0000049 ... Q5SHQ0 39039256
    895252 8vtw:2G (2.35) BS03 MG N/A GO:0000049 ... Q5SHQ0 39039256
    895253 8vtw:2H (2.35) BS01 rna N/A GO:0002181 ... P0DOY8 39039256
    895254 8vtw:2I (2.35) BS01 rna N/A GO:0003735 ... Q5SLQ1 39039256
    895255 8vtw:2N (2.35) BS01 rna N/A GO:0003729 ... P60488 39039256
    895256 8vtw:2O (2.35) BS01 rna N/A GO:0003735 ... Q5SHP8 39039256
    895257 8vtw:2O (2.35) BS02 rna N/A GO:0003735 ... Q5SHP8 39039256
    895258 8vtw:2P (2.35) BS01 rna N/A GO:0003735 ... Q5SHQ7 39039256
    895259 8vtw:2Q (2.35) BS01 rna N/A GO:0000049 ... P60489 39039256
    895260 8vtw:2Q (2.35) BS02 rna N/A GO:0000049 ... P60489 39039256
    895261 8vtw:2Q (2.35) BS03 MG N/A GO:0000049 ... P60489 39039256
    895262 8vtw:2Q (2.35) BS04 MG N/A GO:0000049 ... P60489 39039256
    895263 8vtw:2R (2.35) BS01 rna N/A GO:0003735 ... Q9Z9H5 39039256
    895264 8vtw:2R (2.35) BS02 MG N/A GO:0003735 ... Q9Z9H5 39039256
    895265 8vtw:2S (2.35) BS01 rna N/A GO:0003735 ... Q5SHQ4 39039256
    895266 8vtw:2S (2.35) BS02 rna N/A GO:0003735 ... Q5SHQ4 39039256
    895267 8vtw:2T (2.35) BS01 rna N/A GO:0003735 ... P60490 39039256
    895268 8vtw:2T (2.35) BS02 rna N/A GO:0003735 ... P60490 39039256
    895269 8vtw:2U (2.35) BS01 rna N/A GO:0000027 ... P60491 39039256
    895270 8vtw:2V (2.35) BS01 rna N/A GO:0003723 ... P60492 39039256
    895271 8vtw:2V (2.35) BS02 MG N/A GO:0003723 ... P60492 39039256
    895272 8vtw:2V (2.35) BS03 MG N/A GO:0003723 ... P60492 39039256
    895273 8vtw:2W (2.35) BS01 rna N/A GO:0003735 ... Q5SHP3 39039256
    895274 8vtw:2W (2.35) BS02 MG N/A GO:0003735 ... Q5SHP3 39039256
    895275 8vtw:2W (2.35) BS03 MG N/A GO:0003735 ... Q5SHP3 39039256
    895276 8vtw:2X (2.35) BS01 rna N/A GO:0003735 ... Q5SHP0 39039256
    895277 8vtw:2Y (2.35) BS01 rna N/A GO:0003723 ... Q5SHP9 39039256
    895278 8vtw:2Y (2.35) BS02 ZN N/A GO:0003723 ... Q5SHP9 39039256
    895279 8vtw:2Z (2.35) BS01 rna N/A GO:0003723 ... Q5SHZ1 39039256
    895280 8vtw:2Z (2.35) BS02 rna N/A GO:0003723 ... Q5SHZ1 39039256
    895281 8vtw:2b (2.35) BS01 rna N/A GO:0003735 ... P80371 39039256
    895282 8vtw:2c (2.35) BS01 rna N/A GO:0003676 ... P80372 39039256
    895283 8vtw:2d (2.35) BS01 rna N/A GO:0003723 ... P80373 39039256
    895284 8vtw:2d (2.35) BS02 SF4 N/A GO:0003723 ... P80373 39039256
    895285 8vtw:2e (2.35) BS01 rna N/A GO:0003723 ... Q5SHQ5 39039256
    895286 8vtw:2f (2.35) BS01 rna N/A GO:0003735 ... Q5SLP8 39039256
    895287 8vtw:2f (2.35) BS02 MG N/A GO:0003735 ... Q5SLP8 39039256
    895288 8vtw:2g (2.35) BS01 rna N/A GO:0000049 ... P17291 39039256
    895289 8vtw:2h (2.35) BS01 rna N/A GO:0003735 ... P0DOY9 39039256
    895290 8vtw:2i (2.35) BS01 rna N/A GO:0000049 ... P80374 39039256
    895291 8vtw:2j (2.35) BS01 rna N/A GO:0000049 ... Q5SHN7 39039256
    895292 8vtw:2j (2.35) BS02 MG N/A GO:0000049 ... Q5SHN7 39039256
    895293 8vtw:2k (2.35) BS01 rna N/A GO:0003735 ... P80376 39039256
    895294 8vtw:2k (2.35) BS02 MG N/A GO:0003735 ... P80376 39039256
    895295 8vtw:2l (2.35) BS01 rna N/A GO:0000049 ... Q5SHN3 39039256
    895296 8vtw:2l (2.35) BS02 MG N/A GO:0000049 ... Q5SHN3 39039256
    895297 8vtw:2m (2.35) BS01 rna N/A GO:0000049 ... P80377 39039256
    895298 8vtw:2n (2.35) BS01 rna N/A GO:0003735 ... P0DOY6 39039256
    895299 8vtw:2n (2.35) BS02 ZN N/A GO:0003735 ... P0DOY6 39039256
    895300 8vtw:2o (2.35) BS01 rna N/A GO:0003735 ... Q5SJ76 39039256
    895301 8vtw:2o (2.35) BS02 rna N/A GO:0003735 ... Q5SJ76 39039256
    895302 8vtw:2p (2.35) BS01 rna N/A GO:0003735 ... Q5SJH3 39039256
    895303 8vtw:2q (2.35) BS01 rna N/A GO:0003735 ... P0DOY7 39039256
    895304 8vtw:2r (2.35) BS01 rna N/A GO:0003735 ... Q5SLQ0 39039256
    895305 8vtw:2s (2.35) BS01 rna N/A GO:0000028 ... Q5SHP2 39039256
    895306 8vtw:2t (2.35) BS01 rna N/A GO:0003723 ... P80380 39039256
    895307 8vtw:2t (2.35) BS02 MG N/A GO:0003723 ... P80380 39039256
    895308 8vtw:2y (2.35) BS01 rna N/A GO:0005515 ... P0AD49 39039256
    895309 8vtx:10 (2.4) BS01 rna N/A GO:0003735 ... P60493 39039256
    895310 8vtx:10 (2.4) BS02 rna N/A GO:0003735 ... P60493 39039256
    895311 8vtx:10 (2.4) BS03 rna N/A GO:0003735 ... P60493 39039256
    895312 8vtx:10 (2.4) BS04 MG N/A GO:0003735 ... P60493 39039256
    895313 8vtx:10 (2.4) BS05 MG N/A GO:0003735 ... P60493 39039256
    895314 8vtx:10 (2.4) BS06 MG N/A GO:0003735 ... P60493 39039256
    895315 8vtx:11 (2.4) BS01 rna N/A GO:0003735 ... P60494 39039256
    895316 8vtx:11 (2.4) BS02 rna N/A GO:0003735 ... P60494 39039256
    895317 8vtx:11 (2.4) BS03 MG N/A GO:0003735 ... P60494 39039256
    895318 8vtx:12 (2.4) BS01 rna N/A GO:0003735 ... Q5SHP6 39039256
    895319 8vtx:12 (2.4) BS02 MG N/A GO:0003735 ... Q5SHP6 39039256
    895320 8vtx:13 (2.4) BS01 rna N/A GO:0003735 ... Q5SHQ6 39039256
    895321 8vtx:13 (2.4) BS02 rna N/A GO:0003735 ... Q5SHQ6 39039256
    895322 8vtx:13 (2.4) BS03 MG N/A GO:0003735 ... Q5SHQ6 39039256
    895323 8vtx:13 (2.4) BS04 MG N/A GO:0003735 ... Q5SHQ6 39039256
    895324 8vtx:14 (2.4) BS01 rna N/A GO:0003735 ... Q5SJE1 39039256
    895325 8vtx:14 (2.4) BS02 ZN N/A GO:0003735 ... Q5SJE1 39039256
    895326 8vtx:15 (2.4) BS01 rna N/A GO:0003735 ... P80339 39039256
    895327 8vtx:15 (2.4) BS02 MG N/A GO:0003735 ... P80339 39039256
    895328 8vtx:15 (2.4) BS03 ZN N/A GO:0003735 ... P80339 39039256
    895329 8vtx:16 (2.4) BS01 rna N/A GO:0000049 ... P35871 39039256
    895330 8vtx:16 (2.4) BS02 MG N/A GO:0000049 ... P35871 39039256
    895331 8vtx:16 (2.4) BS03 MG N/A GO:0000049 ... P35871 39039256
    895332 8vtx:16 (2.4) BS04 ZN N/A GO:0000049 ... P35871 39039256
    895333 8vtx:17 (2.4) BS01 rna N/A GO:0003735 ... P80340 39039256
    895334 8vtx:17 (2.4) BS02 MG N/A GO:0003735 ... P80340 39039256
    895335 8vtx:17 (2.4) BS03 MG N/A GO:0003735 ... P80340 39039256
    895336 8vtx:17 (2.4) BS04 MG N/A GO:0003735 ... P80340 39039256
    895337 8vtx:18 (2.4) BS01 rna N/A GO:0003735 ... Q5SKU1 39039256
    895338 8vtx:18 (2.4) BS02 MG N/A GO:0003735 ... Q5SKU1 39039256
    895339 8vtx:18 (2.4) BS03 MG N/A GO:0003735 ... Q5SKU1 39039256
    895340 8vtx:19 (2.4) BS01 rna N/A GO:0003735 ... Q5SHR2 39039256
    895341 8vtx:19 (2.4) BS02 ZN N/A GO:0003735 ... Q5SHR2 39039256
    895342 8vtx:1D (2.4) BS01 rna N/A GO:0002181 ... P60405 39039256
    895343 8vtx:1D (2.4) BS02 rna N/A GO:0002181 ... P60405 39039256
    895344 8vtx:1D (2.4) BS03 MG N/A GO:0002181 ... P60405 39039256
    895345 8vtx:1D (2.4) BS04 MG N/A GO:0002181 ... P60405 39039256
    895346 8vtx:1D (2.4) BS05 MG N/A GO:0002181 ... P60405 39039256
    895347 8vtx:1D (2.4) BS06 MG N/A GO:0002181 ... P60405 39039256
    895348 8vtx:1D (2.4) BS07 MG N/A GO:0002181 ... P60405 39039256
    895349 8vtx:1D (2.4) BS08 MG N/A GO:0002181 ... P60405 39039256
    895350 8vtx:1D (2.4) BS09 MG N/A GO:0002181 ... P60405 39039256
    895351 8vtx:1D (2.4) BS10 MG N/A GO:0002181 ... P60405 39039256
    895352 8vtx:1D (2.4) BS11 MG N/A GO:0002181 ... P60405 39039256
    895353 8vtx:1D (2.4) BS12 MG N/A GO:0002181 ... P60405 39039256
    895354 8vtx:1E (2.4) BS01 rna N/A GO:0003735 ... Q5SHN8 39039256
    895355 8vtx:1E (2.4) BS02 MG N/A GO:0003735 ... Q5SHN8 39039256
    895356 8vtx:1E (2.4) BS03 MG N/A GO:0003735 ... Q5SHN8 39039256
    895357 8vtx:1E (2.4) BS04 MG N/A GO:0003735 ... Q5SHN8 39039256
    895358 8vtx:1E (2.4) BS05 MG N/A GO:0003735 ... Q5SHN8 39039256
    895359 8vtx:1F (2.4) BS01 rna N/A GO:0003735 ... Q5SHN9 39039256
    895360 8vtx:1F (2.4) BS02 MG N/A GO:0003735 ... Q5SHN9 39039256
    895361 8vtx:1F (2.4) BS03 MG N/A GO:0003735 ... Q5SHN9 39039256
    895362 8vtx:1F (2.4) BS04 MG N/A GO:0003735 ... Q5SHN9 39039256
    895363 8vtx:1F (2.4) BS05 MG N/A GO:0003735 ... Q5SHN9 39039256
    895364 8vtx:1F (2.4) BS06 MG N/A GO:0003735 ... Q5SHN9 39039256
    895365 8vtx:1F (2.4) BS07 MG N/A GO:0003735 ... Q5SHN9 39039256
    895366 8vtx:1F (2.4) BS08 MG N/A GO:0003735 ... Q5SHN9 39039256
    895367 8vtx:1F (2.4) BS09 MG N/A GO:0003735 ... Q5SHN9 39039256
    895368 8vtx:1F (2.4) BS10 MG N/A GO:0003735 ... Q5SHN9 39039256
    895369 8vtx:1F (2.4) BS11 MG N/A GO:0003735 ... Q5SHN9 39039256
    895370 8vtx:1G (2.4) BS01 rna N/A GO:0000049 ... Q5SHQ0 39039256
    895371 8vtx:1G (2.4) BS02 rna N/A GO:0000049 ... Q5SHQ0 39039256
    895372 8vtx:1G (2.4) BS03 rna N/A GO:0000049 ... Q5SHQ0 39039256
    895373 8vtx:1G (2.4) BS04 MG N/A GO:0000049 ... Q5SHQ0 39039256
    895374 8vtx:1H (2.4) BS01 rna N/A GO:0002181 ... P0DOY8 39039256
    895375 8vtx:1I (2.4) BS01 rna N/A GO:0003735 ... Q5SLQ1 39039256
    895376 8vtx:1I (2.4) BS02 MG N/A GO:0003735 ... Q5SLQ1 39039256
    895377 8vtx:1N (2.4) BS01 rna N/A GO:0003729 ... P60488 39039256
    895378 8vtx:1N (2.4) BS02 MG N/A GO:0003729 ... P60488 39039256
    895379 8vtx:1N (2.4) BS03 MG N/A GO:0003729 ... P60488 39039256
    895380 8vtx:1N (2.4) BS04 MG N/A GO:0003729 ... P60488 39039256
    895381 8vtx:1O (2.4) BS01 rna N/A GO:0003735 ... Q5SHP8 39039256
    895382 8vtx:1O (2.4) BS02 rna N/A GO:0003735 ... Q5SHP8 39039256
    895383 8vtx:1O (2.4) BS03 MG N/A GO:0003735 ... Q5SHP8 39039256
    895384 8vtx:1O (2.4) BS04 MG N/A GO:0003735 ... Q5SHP8 39039256
    895385 8vtx:1P (2.4) BS01 rna N/A GO:0003735 ... Q5SHQ7 39039256
    895386 8vtx:1P (2.4) BS02 MG N/A GO:0003735 ... Q5SHQ7 39039256
    895387 8vtx:1P (2.4) BS03 MG N/A GO:0003735 ... Q5SHQ7 39039256
    895388 8vtx:1P (2.4) BS04 MG N/A GO:0003735 ... Q5SHQ7 39039256
    895389 8vtx:1P (2.4) BS05 MG N/A GO:0003735 ... Q5SHQ7 39039256
    895390 8vtx:1P (2.4) BS06 MG N/A GO:0003735 ... Q5SHQ7 39039256
    895391 8vtx:1Q (2.4) BS01 rna N/A GO:0000049 ... P60489 39039256
    895392 8vtx:1Q (2.4) BS02 rna N/A GO:0000049 ... P60489 39039256
    895393 8vtx:1Q (2.4) BS03 rna N/A GO:0000049 ... P60489 39039256
    895394 8vtx:1Q (2.4) BS04 rna N/A GO:0000049 ... P60489 39039256
    895395 8vtx:1Q (2.4) BS05 MG N/A GO:0000049 ... P60489 39039256
    895396 8vtx:1Q (2.4) BS06 MG N/A GO:0000049 ... P60489 39039256
    895397 8vtx:1Q (2.4) BS07 MG N/A GO:0000049 ... P60489 39039256
    895398 8vtx:1Q (2.4) BS08 MG N/A GO:0000049 ... P60489 39039256
    895399 8vtx:1Q (2.4) BS09 MG N/A GO:0000049 ... P60489 39039256
    895400 8vtx:1R (2.4) BS01 rna N/A GO:0003735 ... Q9Z9H5 39039256

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).