SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    895201 8utj:P (3.5) BS02 rna N/A GO:0000027 ... P0A7K6 40789848
    895202 8utj:Q (3.5) BS01 rna N/A GO:0000027 ... P0A7L3 40789848
    895203 8utj:R (3.5) BS01 rna N/A GO:0002181 ... P0AG48 40789848
    895204 8utj:S (3.5) BS01 rna N/A GO:0002181 ... P61175 40789848
    895205 8utj:T (3.5) BS01 rna N/A GO:0000027 ... P0ADZ0 40789848
    895206 8utj:U (3.5) BS01 rna N/A GO:0000027 ... P60624 40789848
    895207 8utj:V (3.5) BS01 rna N/A GO:0000027 ... P68919 40789848
    895208 8utj:W (3.5) BS01 rna N/A GO:0000027 ... P0A7L8 40789848
    895209 8utj:W (3.5) BS02 rna N/A GO:0000027 ... P0A7L8 40789848
    895210 8utj:X (3.5) BS01 rna N/A GO:0000027 ... P0A7M2 40789848
    895211 8utj:Y (3.5) BS01 rna N/A GO:0000027 ... P0A7M6 40789848
    895212 8utj:Z (3.5) BS01 rna N/A GO:0000027 ... P0AG51 40789848
    895213 8utj:a (3.5) BS01 rna N/A GO:0002181 ... P0A7M9 40789848
    895214 8utj:a (3.5) BS02 rna N/A GO:0002181 ... P0A7M9 40789848
    895215 8utj:b (3.5) BS01 rna N/A GO:0000027 ... P0A7N4 40789848
    895216 8utj:c (3.5) BS01 rna N/A GO:0000027 ... P0A7N9 40789848
    895217 8utj:d (3.5) BS01 rna N/A GO:0002181 ... P0A7P5 40789848
    895218 8utj:e (3.5) BS01 rna N/A GO:0002181 ... P0A7Q1 40789848
    895219 8utj:f (3.5) BS01 rna N/A GO:0002181 ... P0A7Q6 40789848
    895220 8utj:f (3.5) BS02 MG N/A GO:0002181 ... P0A7Q6 40789848
    895221 8utj:g (3.5) BS01 rna N/A GO:0000028 ... P0A7V0 40789848
    895222 8utj:h (3.5) BS01 rna N/A GO:0000028 ... P0A7V3 40789848
    895223 8utj:i (3.5) BS01 rna N/A GO:0000028 ... P0A7V8 40789848
    895224 8utj:j (3.5) BS01 rna N/A GO:0000028 ... P0A7W1 40789848
    895225 8utj:k (3.5) BS01 rna N/A GO:0002181 ... P02358 40789848
    895226 8utj:l (3.5) BS01 rna N/A GO:0000028 ... P02359 40789848
    895227 8utj:m (3.5) BS01 rna N/A GO:0000028 ... P0A7W7 40789848
    895228 8utj:n (3.5) BS01 rna N/A GO:0002181 ... P0A7X3 40789848
    895229 8utj:n (3.5) BS02 rna N/A GO:0002181 ... P0A7X3 40789848
    895230 8utj:o (3.5) BS01 rna N/A GO:0000049 ... P0A7R5 40789848
    895231 8utj:p (3.5) BS01 rna N/A GO:0002181 ... P0A7R9 40789848
    895232 8utj:q (3.5) BS01 rna N/A GO:0000049 ... P0A7S3 40789848
    895233 8utj:r (3.5) BS01 rna N/A GO:0000049 ... P0A7S9 40789848
    895234 8utj:r (3.5) BS02 rna N/A GO:0000049 ... P0A7S9 40789848
    895235 8utj:s (3.5) BS01 rna N/A GO:0000028 ... P0AG59 40789848
    895236 8utj:t (3.5) BS01 rna N/A GO:0000028 ... P0ADZ4 40789848
    895237 8utj:t (3.5) BS02 rna N/A GO:0000028 ... P0ADZ4 40789848
    895238 8utj:u (3.5) BS01 rna N/A GO:0000028 ... P0A7T3 40789848
    895239 8utj:v (3.5) BS01 rna N/A GO:0000028 ... P0AG63 40789848
    895240 8utj:w (3.5) BS01 rna N/A GO:0002181 ... P0A7T7 40789848
    895241 8utj:x (3.5) BS01 rna N/A GO:0002181 ... P0A7U3 40789848
    895242 8utj:y (3.5) BS01 rna N/A GO:0000028 ... P0A7U7 40789848
    895243 8utj:z (3.5) BS01 rna N/A GO:0000028 ... P68679 40789848
    895244 8utl:A (1.56) BS01 peptide 3.4.21.4 GO:0004175 ... P00760 38306609
    895245 8utl:A (1.56) BS02 CA 3.4.21.4 GO:0004175 ... P00760 38306609
    895246 8utn:A (3.1) BS01 GTP 3.6.5.- GO:0000226 ... Q2XVP4 38956021
    895247 8utn:B (3.1) BS01 GDP ? GO:0003924 ... A0A287AGU7 38956021
    895248 8utn:B (3.1) BS02 TA1 ? GO:0003924 ... A0A287AGU7 38956021
    895249 8utn:E (3.1) BS01 GTP 3.6.5.- GO:0000226 ... Q2XVP4 38956021
    895250 8utn:I (3.1) BS01 GDP ? GO:0003924 ... A0A287AGU7 38956021
    895251 8utn:I (3.1) BS02 TA1 ? GO:0003924 ... A0A287AGU7 38956021
    895252 8utn:K (3.1) BS01 MG ? GO:0003700 ... Q12756 38956021
    895253 8utn:K (3.1) BS02 ANP ? GO:0003700 ... Q12756 38956021
    895254 8utn:N (3.1) BS01 ANP ? GO:0003700 ... Q12756 38956021
    895255 8utn:S (3.1) BS01 GTP 3.6.5.- GO:0000226 ... Q2XVP4 38956021
    895256 8uto:A (3.2) BS01 GTP 3.6.5.- GO:0000226 ... Q2XVP4 38956021
    895257 8uto:B (3.2) BS01 GDP ? GO:0003924 ... A0A287AGU7 38956021
    895258 8uto:B (3.2) BS02 TA1 ? GO:0003924 ... A0A287AGU7 38956021
    895259 8uto:E (3.2) BS01 GTP 3.6.5.- GO:0000226 ... Q2XVP4 38956021
    895260 8uto:I (3.2) BS01 GDP ? GO:0003924 ... A0A287AGU7 38956021
    895261 8uto:I (3.2) BS02 TA1 ? GO:0003924 ... A0A287AGU7 38956021
    895262 8uto:K (3.2) BS01 ANP ? GO:0003700 ... Q12756 38956021
    895263 8uto:N (3.2) BS01 ANP ? GO:0003700 ... Q12756 38956021
    895264 8uto:S (3.2) BS01 GTP 3.6.5.- GO:0000226 ... Q2XVP4 38956021
    895265 8utp:A (3.2) BS01 GTP 3.6.5.- GO:0000226 ... Q2XVP4 38956021
    895266 8utp:B (3.2) BS01 GDP ? GO:0003924 ... A0A287AGU7 38956021
    895267 8utp:B (3.2) BS02 TA1 ? GO:0003924 ... A0A287AGU7 38956021
    895268 8utp:E (3.2) BS01 GTP 3.6.5.- GO:0000226 ... Q2XVP4 38956021
    895269 8utp:I (3.2) BS01 GDP ? GO:0003924 ... A0A287AGU7 38956021
    895270 8utp:I (3.2) BS02 TA1 ? GO:0003924 ... A0A287AGU7 38956021
    895271 8utp:K (3.2) BS01 MG ? GO:0003700 ... Q12756 38956021
    895272 8utp:K (3.2) BS02 ANP ? GO:0003700 ... Q12756 38956021
    895273 8utp:N (3.2) BS01 ANP ? GO:0003700 ... Q12756 38956021
    895274 8utp:S (3.2) BS01 GTP 3.6.5.- GO:0000226 ... Q2XVP4 38956021
    895275 8utq:A (3.1) BS01 GTP 3.6.5.- GO:0000226 ... Q2XVP4 38956021
    895276 8utq:B (3.1) BS01 GDP ? GO:0003924 ... A0A287AGU7 38956021
    895277 8utq:B (3.1) BS02 TA1 ? GO:0003924 ... A0A287AGU7 38956021
    895278 8utq:E (3.1) BS01 GTP 3.6.5.- GO:0000226 ... Q2XVP4 38956021
    895279 8utq:I (3.1) BS01 GDP ? GO:0003924 ... A0A287AGU7 38956021
    895280 8utq:I (3.1) BS02 TA1 ? GO:0003924 ... A0A287AGU7 38956021
    895281 8utq:K (3.1) BS01 MG ? GO:0003700 ... Q12756 38956021
    895282 8utq:K (3.1) BS02 ANP ? GO:0003700 ... Q12756 38956021
    895283 8utr:A (3.3) BS01 GTP 3.6.5.- GO:0000226 ... Q2XVP4 38956021
    895284 8utr:A (3.3) BS02 MG 3.6.5.- GO:0000226 ... Q2XVP4 38956021
    895285 8utr:B (3.3) BS01 GDP ? GO:0003924 ... A0A287AGU7 38956021
    895286 8utr:B (3.3) BS02 TA1 ? GO:0003924 ... A0A287AGU7 38956021
    895287 8utr:K (3.3) BS01 ADP ? GO:0003700 ... Q12756 38956021
    895288 8uts:A (2.7) BS01 GTP 3.6.5.- GO:0000226 ... Q2XVP4 38956021
    895289 8uts:B (2.7) BS01 GDP ? GO:0003924 ... A0A287AGU7 38956021
    895290 8uts:B (2.7) BS02 TA1 ? GO:0003924 ... A0A287AGU7 38956021
    895291 8utt:A (3.1) BS01 GTP 3.6.5.- GO:0000226 ... Q2XVP4 38956021
    895292 8utt:B (3.1) BS01 GDP ? GO:0003924 ... A0A287AGU7 38956021
    895293 8utt:B (3.1) BS02 TA1 ? GO:0003924 ... A0A287AGU7 38956021
    895294 8utt:E (3.1) BS01 GTP 3.6.5.- GO:0000226 ... Q2XVP4 38956021
    895295 8utt:I (3.1) BS01 GDP ? GO:0003924 ... A0A287AGU7 38956021
    895296 8utt:I (3.1) BS02 TA1 ? GO:0003924 ... A0A287AGU7 38956021
    895297 8utt:K (3.1) BS01 MG ? GO:0003700 ... Q12756 38956021
    895298 8utt:K (3.1) BS02 ANP ? GO:0003700 ... Q12756 38956021
    895299 8utt:N (3.1) BS01 ANP ? GO:0003700 ... Q12756 38956021
    895300 8utt:S (3.1) BS01 GTP 3.6.5.- GO:0000226 ... Q2XVP4 38956021
    895301 8utu:A (3.0) BS01 GTP 3.6.5.- GO:0000226 ... Q2XVP4 38956021
    895302 8utu:B (3.0) BS01 GDP ? GO:0003924 ... A0A287AGU7 38956021
    895303 8utu:B (3.0) BS02 TA1 ? GO:0003924 ... A0A287AGU7 38956021
    895304 8utu:E (3.0) BS01 GTP 3.6.5.- GO:0000226 ... Q2XVP4 38956021
    895305 8utu:K (3.0) BS01 MG ? GO:0003700 ... Q12756 38956021
    895306 8utu:K (3.0) BS02 ANP ? GO:0003700 ... Q12756 38956021
    895307 8utv:A (3.0) BS01 GTP 3.6.5.- GO:0000226 ... Q2XVP4 38956021
    895308 8utv:A (3.0) BS02 MG 3.6.5.- GO:0000226 ... Q2XVP4 38956021
    895309 8utv:B (3.0) BS01 GDP ? GO:0003924 ... A0A287AGU7 38956021
    895310 8utv:B (3.0) BS02 TA1 ? GO:0003924 ... A0A287AGU7 38956021
    895311 8utv:E (3.0) BS01 GTP 3.6.5.- GO:0000226 ... Q2XVP4 38956021
    895312 8utv:E (3.0) BS02 MG 3.6.5.- GO:0000226 ... Q2XVP4 38956021
    895313 8utv:K (3.0) BS01 ADP ? GO:0003700 ... Q12756 38956021
    895314 8utw:A (3.4) BS01 GTP 3.6.5.- GO:0000226 ... Q2XVP4 38956021
    895315 8utw:A (3.4) BS02 MG 3.6.5.- GO:0000226 ... Q2XVP4 38956021
    895316 8utw:B (3.4) BS01 GDP ? GO:0003924 ... A0A287AGU7 38956021
    895317 8utw:B (3.4) BS02 TA1 ? GO:0003924 ... A0A287AGU7 38956021
    895318 8uty:A (3.3) BS01 GTP 3.6.5.- GO:0000226 ... Q2XVP4 38956021
    895319 8uty:B (3.3) BS01 GDP ? GO:0003924 ... A0A287AGU7 38956021
    895320 8uty:B (3.3) BS02 TA1 ? GO:0003924 ... A0A287AGU7 38956021
    895321 8uty:E (3.3) BS01 GTP 3.6.5.- GO:0000226 ... Q2XVP4 38956021
    895322 8uty:I (3.3) BS01 GDP ? GO:0003924 ... A0A287AGU7 38956021
    895323 8uty:I (3.3) BS02 TA1 ? GO:0003924 ... A0A287AGU7 38956021
    895324 8uty:K (3.3) BS01 MG ? GO:0003700 ... Q12756 38956021
    895325 8uty:K (3.3) BS02 ANP ? GO:0003700 ... Q12756 38956021
    895326 8uty:N (3.3) BS01 ANP ? GO:0003700 ... Q12756 38956021
    895327 8uty:S (3.3) BS01 GTP 3.6.5.- GO:0000226 ... Q2XVP4 38956021
    895328 8uu4:1 (3.0) BS01 rna ? GO:0003735 ... A0A0U5AGL9 38407413
    895329 8uu4:2 (3.0) BS01 rna ? GO:0003735 ... A0A0U4VSJ1 38407413
    895330 8uu4:3 (3.0) BS01 rna ? GO:0003735 ... A0A0U4MT39 38407413
    895331 8uu4:4 (3.0) BS01 rna ? GO:0003735 ... A0A660JNN0 38407413
    895332 8uu4:4 (3.0) BS02 ZN ? GO:0003735 ... A0A660JNN0 38407413
    895333 8uu4:5 (3.0) BS01 rna ? GO:0003735 ... A0A660JRA4 38407413
    895334 8uu4:5 (3.0) BS02 ZN ? GO:0003735 ... A0A660JRA4 38407413
    895335 8uu4:6 (3.0) BS01 rna ? GO:0003735 ... A0A660JKZ6 38407413
    895336 8uu4:7 (3.0) BS01 rna ? GO:0003735 ... A0A660JIB9 38407413
    895337 8uu4:8 (3.0) BS01 rna ? GO:0003735 ... A0A0U5AM58 38407413
    895338 8uu4:8 (3.0) BS02 ZN ? GO:0003735 ... A0A0U5AM58 38407413
    895339 8uu4:C (3.0) BS01 rna ? GO:0002181 ... A0A0U5A742 38407413
    895340 8uu4:D (3.0) BS01 rna ? GO:0003735 ... A0A0U5ADD0 38407413
    895341 8uu4:E (3.0) BS01 rna ? GO:0003735 ... A0A0U4VSH7 38407413
    895342 8uu4:F (3.0) BS01 rna ? GO:0000049 ... A0A0U5AWX6 38407413
    895343 8uu4:F (3.0) BS02 rna ? GO:0000049 ... A0A0U5AWX6 38407413
    895344 8uu4:G (3.0) BS01 rna ? GO:0002181 ... A0A0U5ALU0 38407413
    895345 8uu4:L (3.0) BS01 rna ? GO:0003729 ... A0A0U5AGN0 38407413
    895346 8uu4:M (3.0) BS01 rna ? GO:0003735 ... A0A0U5AP82 38407413
    895347 8uu4:M (3.0) BS02 rna ? GO:0003735 ... A0A0U5AP82 38407413
    895348 8uu4:N (3.0) BS01 rna ? GO:0003735 ... A0A0U5A6S7 38407413
    895349 8uu4:O (3.0) BS01 rna ? GO:0003735 ... A0A0U4VSU8 38407413
    895350 8uu4:O (3.0) BS02 rna ? GO:0003735 ... A0A0U4VSU8 38407413
    895351 8uu4:P (3.0) BS01 rna ? GO:0003735 ... A0A0U4VSW3 38407413
    895352 8uu4:Q (3.0) BS01 rna ? GO:0003735 ... A0A0U5AR65 38407413
    895353 8uu4:Q (3.0) BS02 rna ? GO:0003735 ... A0A0U5AR65 38407413
    895354 8uu4:R (3.0) BS01 rna ? GO:0003735 ... A0A6B0JQF2 38407413
    895355 8uu4:R (3.0) BS02 rna ? GO:0003735 ... A0A6B0JQF2 38407413
    895356 8uu4:S (3.0) BS01 rna ? GO:0000027 ... A0A660JH71 38407413
    895357 8uu4:T (3.0) BS01 rna ? GO:0003723 ... A0A0U5AD18 38407413
    895358 8uu4:U (3.0) BS01 rna ? GO:0003735 ... A0A0U5ANW2 38407413
    895359 8uu4:V (3.0) BS01 rna ? GO:0003735 ... A0A0U4MTC5 38407413
    895360 8uu4:W (3.0) BS01 rna ? GO:0003723 ... A0A0U5AD05 38407413
    895361 8uu4:Y (3.0) BS01 rna ? GO:0003735 ... A0A660JMC7 38407413
    895362 8uu4:Y (3.0) BS02 rna ? GO:0003735 ... A0A660JMC7 38407413
    895363 8uu4:Z (3.0) BS01 rna ? GO:0003735 ... A0A660JJV9 38407413
    895364 8uu4:b (3.0) BS01 rna N/A GO:0003735 ... N/A 38407413
    895365 8uu4:c (3.0) BS01 rna ? GO:0003676 ... A0A0U4VSU9 38407413
    895366 8uu4:d (3.0) BS01 rna N/A GO:0003723 ... N/A 38407413
    895367 8uu4:e (3.0) BS01 rna ? GO:0003723 ... A0A0U4VSJ3 38407413
    895368 8uu4:f (3.0) BS01 rna ? GO:0003735 ... A0A7X0WKH5 38407413
    895369 8uu4:g (3.0) BS01 rna ? GO:0000049 ... A0A660JPE1 38407413
    895370 8uu4:h (3.0) BS01 rna ? GO:0003735 ... A0A0U5A6U3 38407413
    895371 8uu4:i (3.0) BS01 rna ? GO:0003723 ... A0A0U5ADS9 38407413
    895372 8uu4:j (3.0) BS01 rna ? GO:0000049 ... A0A0U5A730 38407413
    895373 8uu4:k (3.0) BS01 rna ? GO:0003735 ... A0A0U5AP31 38407413
    895374 8uu4:l (3.0) BS01 rna ? GO:0000049 ... A0A660JM56 38407413
    895375 8uu4:m (3.0) BS01 rna ? GO:0000049 ... A0A0U5ARJ0 38407413
    895376 8uu4:n (3.0) BS01 rna ? GO:0003735 ... A0A0U5AGZ1 38407413
    895377 8uu4:n (3.0) BS02 ZN ? GO:0003735 ... A0A0U5AGZ1 38407413
    895378 8uu4:o (3.0) BS01 rna ? GO:0003735 ... A0A660JLK4 38407413
    895379 8uu4:o (3.0) BS02 rna ? GO:0003735 ... A0A660JLK4 38407413
    895380 8uu4:p (3.0) BS01 rna ? GO:0003735 ... A0A6B0JQE1 38407413
    895381 8uu4:q (3.0) BS01 rna ? GO:0003735 ... A0A0U5ADR4 38407413
    895382 8uu4:r (3.0) BS01 rna ? GO:0003735 ... A0A660JK14 38407413
    895383 8uu4:s (3.0) BS01 rna ? GO:0000028 ... A0A0U4VSH5 38407413
    895384 8uu4:t (3.0) BS01 rna ? GO:0003723 ... A0A660JML5 38407413
    895385 8uu4:w (3.0) BS01 rna ? GO:0005737 ... A0A660JMK7 38407413
    895386 8uu5:1 (3.0) BS01 rna ? GO:0003735 ... A0A0U5AGL9 38407413
    895387 8uu5:2 (3.0) BS01 rna ? GO:0003735 ... A0A0U4VSJ1 38407413
    895388 8uu5:2 (3.0) BS02 rna ? GO:0003735 ... A0A0U4VSJ1 38407413
    895389 8uu5:3 (3.0) BS01 rna ? GO:0003735 ... A0A0U4MT39 38407413
    895390 8uu5:4 (3.0) BS01 rna ? GO:0003735 ... A0A660JNN0 38407413
    895391 8uu5:4 (3.0) BS02 ZN ? GO:0003735 ... A0A660JNN0 38407413
    895392 8uu5:5 (3.0) BS01 rna ? GO:0003735 ... A0A660JRA4 38407413
    895393 8uu5:5 (3.0) BS02 ZN ? GO:0003735 ... A0A660JRA4 38407413
    895394 8uu5:6 (3.0) BS01 rna ? GO:0003735 ... A0A660JKZ6 38407413
    895395 8uu5:7 (3.0) BS01 rna ? GO:0003735 ... A0A660JIB9 38407413
    895396 8uu5:8 (3.0) BS01 rna ? GO:0003735 ... A0A0U5AM58 38407413
    895397 8uu5:8 (3.0) BS02 ZN ? GO:0003735 ... A0A0U5AM58 38407413
    895398 8uu5:C (3.0) BS01 rna ? GO:0002181 ... A0A0U5A742 38407413
    895399 8uu5:C (3.0) BS02 MG ? GO:0002181 ... A0A0U5A742 38407413
    895400 8uu5:D (3.0) BS01 rna ? GO:0003735 ... A0A0U5ADD0 38407413

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).