SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    895401 8uu5:E (3.0) BS01 rna ? GO:0003735 ... A0A0U4VSH7 38407413
    895402 8uu5:F (3.0) BS01 rna ? GO:0000049 ... A0A0U5AWX6 38407413
    895403 8uu5:F (3.0) BS02 rna ? GO:0000049 ... A0A0U5AWX6 38407413
    895404 8uu5:G (3.0) BS01 rna ? GO:0002181 ... A0A0U5ALU0 38407413
    895405 8uu5:L (3.0) BS01 rna ? GO:0003729 ... A0A0U5AGN0 38407413
    895406 8uu5:M (3.0) BS01 rna ? GO:0003735 ... A0A0U5AP82 38407413
    895407 8uu5:M (3.0) BS02 rna ? GO:0003735 ... A0A0U5AP82 38407413
    895408 8uu5:N (3.0) BS01 rna ? GO:0003735 ... A0A0U5A6S7 38407413
    895409 8uu5:O (3.0) BS01 rna ? GO:0003735 ... A0A0U4VSU8 38407413
    895410 8uu5:O (3.0) BS02 rna ? GO:0003735 ... A0A0U4VSU8 38407413
    895411 8uu5:P (3.0) BS01 rna ? GO:0003735 ... A0A0U4VSW3 38407413
    895412 8uu5:Q (3.0) BS01 rna ? GO:0003735 ... A0A0U5AR65 38407413
    895413 8uu5:Q (3.0) BS02 rna ? GO:0003735 ... A0A0U5AR65 38407413
    895414 8uu5:R (3.0) BS01 rna ? GO:0003735 ... A0A6B0JQF2 38407413
    895415 8uu5:R (3.0) BS02 rna ? GO:0003735 ... A0A6B0JQF2 38407413
    895416 8uu5:S (3.0) BS01 rna ? GO:0000027 ... A0A660JH71 38407413
    895417 8uu5:T (3.0) BS01 rna ? GO:0003723 ... A0A0U5AD18 38407413
    895418 8uu5:U (3.0) BS01 rna ? GO:0003735 ... A0A0U5ANW2 38407413
    895419 8uu5:V (3.0) BS01 rna ? GO:0003735 ... A0A0U4MTC5 38407413
    895420 8uu5:W (3.0) BS01 rna ? GO:0003723 ... A0A0U5AD05 38407413
    895421 8uu5:Y (3.0) BS01 rna ? GO:0003735 ... A0A660JMC7 38407413
    895422 8uu5:Z (3.0) BS01 rna ? GO:0003735 ... A0A660JJV9 38407413
    895423 8uu5:b (3.0) BS01 rna N/A GO:0003735 ... N/A 38407413
    895424 8uu5:c (3.0) BS01 rna ? GO:0003676 ... A0A0U4VSU9 38407413
    895425 8uu5:d (3.0) BS01 rna N/A GO:0003723 ... N/A 38407413
    895426 8uu5:e (3.0) BS01 rna ? GO:0003723 ... A0A0U4VSJ3 38407413
    895427 8uu5:f (3.0) BS01 rna ? GO:0003735 ... A0A7X0WKH5 38407413
    895428 8uu5:g (3.0) BS01 rna ? GO:0000049 ... A0A660JPE1 38407413
    895429 8uu5:h (3.0) BS01 rna ? GO:0003735 ... A0A0U5A6U3 38407413
    895430 8uu5:i (3.0) BS01 rna ? GO:0003723 ... A0A0U5ADS9 38407413
    895431 8uu5:i (3.0) BS02 rna ? GO:0003723 ... A0A0U5ADS9 38407413
    895432 8uu5:j (3.0) BS01 rna ? GO:0000049 ... A0A0U5A730 38407413
    895433 8uu5:k (3.0) BS01 rna ? GO:0003735 ... A0A0U5AP31 38407413
    895434 8uu5:l (3.0) BS01 rna ? GO:0000049 ... A0A660JM56 38407413
    895435 8uu5:m (3.0) BS01 rna ? GO:0000049 ... A0A0U5ARJ0 38407413
    895436 8uu5:m (3.0) BS02 MG ? GO:0000049 ... A0A0U5ARJ0 38407413
    895437 8uu5:n (3.0) BS01 rna ? GO:0003735 ... A0A0U5AGZ1 38407413
    895438 8uu5:n (3.0) BS02 ZN ? GO:0003735 ... A0A0U5AGZ1 38407413
    895439 8uu5:o (3.0) BS01 rna ? GO:0003735 ... A0A660JLK4 38407413
    895440 8uu5:o (3.0) BS02 rna ? GO:0003735 ... A0A660JLK4 38407413
    895441 8uu5:p (3.0) BS01 rna ? GO:0003735 ... A0A6B0JQE1 38407413
    895442 8uu5:q (3.0) BS01 rna ? GO:0003735 ... A0A0U5ADR4 38407413
    895443 8uu5:r (3.0) BS01 rna ? GO:0003735 ... A0A660JK14 38407413
    895444 8uu5:s (3.0) BS01 rna ? GO:0000028 ... A0A0U4VSH5 38407413
    895445 8uu5:t (3.0) BS01 rna ? GO:0003723 ... A0A660JML5 38407413
    895446 8uu5:t (3.0) BS02 MG ? GO:0003723 ... A0A660JML5 38407413
    895447 8uu6:1 (3.3) BS01 rna ? GO:0003735 ... A0A0U5AGL9 38407413
    895448 8uu6:2 (3.3) BS01 rna ? GO:0003735 ... A0A0U4VSJ1 38407413
    895449 8uu6:3 (3.3) BS01 rna ? GO:0003735 ... A0A0U4MT39 38407413
    895450 8uu6:4 (3.3) BS01 rna ? GO:0003735 ... A0A660JNN0 38407413
    895451 8uu6:4 (3.3) BS02 ZN ? GO:0003735 ... A0A660JNN0 38407413
    895452 8uu6:5 (3.3) BS01 rna ? GO:0003735 ... A0A660JRA4 38407413
    895453 8uu6:5 (3.3) BS02 ZN ? GO:0003735 ... A0A660JRA4 38407413
    895454 8uu6:6 (3.3) BS01 rna ? GO:0003735 ... A0A660JKZ6 38407413
    895455 8uu6:7 (3.3) BS01 rna ? GO:0003735 ... A0A660JIB9 38407413
    895456 8uu6:8 (3.3) BS01 rna ? GO:0003735 ... A0A0U5AM58 38407413
    895457 8uu6:8 (3.3) BS02 ZN ? GO:0003735 ... A0A0U5AM58 38407413
    895458 8uu6:C (3.3) BS01 rna ? GO:0002181 ... A0A0U5A742 38407413
    895459 8uu6:C (3.3) BS02 rna ? GO:0002181 ... A0A0U5A742 38407413
    895460 8uu6:D (3.3) BS01 rna ? GO:0003735 ... A0A0U5ADD0 38407413
    895461 8uu6:E (3.3) BS01 rna ? GO:0003735 ... A0A0U4VSH7 38407413
    895462 8uu6:F (3.3) BS01 rna ? GO:0000049 ... A0A0U5AWX6 38407413
    895463 8uu6:F (3.3) BS02 rna ? GO:0000049 ... A0A0U5AWX6 38407413
    895464 8uu6:G (3.3) BS01 rna ? GO:0002181 ... A0A0U5ALU0 38407413
    895465 8uu6:L (3.3) BS01 rna ? GO:0003729 ... A0A0U5AGN0 38407413
    895466 8uu6:M (3.3) BS01 rna ? GO:0003735 ... A0A0U5AP82 38407413
    895467 8uu6:N (3.3) BS01 rna ? GO:0003735 ... A0A0U5A6S7 38407413
    895468 8uu6:O (3.3) BS01 rna ? GO:0003735 ... A0A0U4VSU8 38407413
    895469 8uu6:P (3.3) BS01 rna ? GO:0003735 ... A0A0U4VSW3 38407413
    895470 8uu6:Q (3.3) BS01 rna ? GO:0003735 ... A0A0U5AR65 38407413
    895471 8uu6:Q (3.3) BS02 rna ? GO:0003735 ... A0A0U5AR65 38407413
    895472 8uu6:R (3.3) BS01 rna ? GO:0003735 ... A0A6B0JQF2 38407413
    895473 8uu6:S (3.3) BS01 rna ? GO:0000027 ... A0A660JH71 38407413
    895474 8uu6:T (3.3) BS01 rna ? GO:0003723 ... A0A0U5AD18 38407413
    895475 8uu6:U (3.3) BS01 rna ? GO:0003735 ... A0A0U5ANW2 38407413
    895476 8uu6:V (3.3) BS01 rna ? GO:0003735 ... A0A0U4MTC5 38407413
    895477 8uu6:W (3.3) BS01 rna ? GO:0003723 ... A0A0U5AD05 38407413
    895478 8uu6:Y (3.3) BS01 rna ? GO:0003735 ... A0A660JMC7 38407413
    895479 8uu6:Z (3.3) BS01 rna ? GO:0003735 ... A0A660JJV9 38407413
    895480 8uu6:b (3.3) BS01 rna N/A GO:0003735 ... N/A 38407413
    895481 8uu6:c (3.3) BS01 rna ? GO:0003676 ... A0A0U4VSU9 38407413
    895482 8uu6:d (3.3) BS01 rna N/A GO:0003723 ... N/A 38407413
    895483 8uu6:e (3.3) BS01 rna ? GO:0003723 ... A0A0U4VSJ3 38407413
    895484 8uu6:f (3.3) BS01 rna ? GO:0003735 ... A0A7X0WKH5 38407413
    895485 8uu6:g (3.3) BS01 rna ? GO:0000049 ... A0A660JPE1 38407413
    895486 8uu6:h (3.3) BS01 rna ? GO:0003735 ... A0A0U5A6U3 38407413
    895487 8uu6:i (3.3) BS01 rna ? GO:0003723 ... A0A0U5ADS9 38407413
    895488 8uu6:j (3.3) BS01 rna ? GO:0000049 ... A0A0U5A730 38407413
    895489 8uu6:k (3.3) BS01 rna ? GO:0003735 ... A0A0U5AP31 38407413
    895490 8uu6:l (3.3) BS01 rna ? GO:0000049 ... A0A660JM56 38407413
    895491 8uu6:m (3.3) BS01 rna ? GO:0000049 ... A0A0U5ARJ0 38407413
    895492 8uu6:n (3.3) BS01 rna ? GO:0003735 ... A0A0U5AGZ1 38407413
    895493 8uu6:n (3.3) BS02 ZN ? GO:0003735 ... A0A0U5AGZ1 38407413
    895494 8uu6:o (3.3) BS01 rna ? GO:0003735 ... A0A660JLK4 38407413
    895495 8uu6:o (3.3) BS02 rna ? GO:0003735 ... A0A660JLK4 38407413
    895496 8uu6:p (3.3) BS01 rna ? GO:0003735 ... A0A6B0JQE1 38407413
    895497 8uu6:q (3.3) BS01 rna ? GO:0003735 ... A0A0U5ADR4 38407413
    895498 8uu6:q (3.3) BS02 MG ? GO:0003735 ... A0A0U5ADR4 38407413
    895499 8uu6:r (3.3) BS01 rna ? GO:0003735 ... A0A660JK14 38407413
    895500 8uu6:s (3.3) BS01 rna ? GO:0000028 ... A0A0U4VSH5 38407413
    895501 8uu6:t (3.3) BS01 rna ? GO:0003723 ... A0A660JML5 38407413
    895502 8uu7:1 (3.2) BS01 rna ? GO:0003735 ... A0A0U5AGL9 38407413
    895503 8uu7:2 (3.2) BS01 rna ? GO:0003735 ... A0A0U4VSJ1 38407413
    895504 8uu7:3 (3.2) BS01 rna ? GO:0003735 ... A0A0U4MT39 38407413
    895505 8uu7:4 (3.2) BS01 rna ? GO:0003735 ... A0A660JNN0 38407413
    895506 8uu7:4 (3.2) BS02 ZN ? GO:0003735 ... A0A660JNN0 38407413
    895507 8uu7:5 (3.2) BS01 rna ? GO:0003735 ... A0A660JRA4 38407413
    895508 8uu7:5 (3.2) BS02 ZN ? GO:0003735 ... A0A660JRA4 38407413
    895509 8uu7:6 (3.2) BS01 rna ? GO:0003735 ... A0A660JKZ6 38407413
    895510 8uu7:7 (3.2) BS01 rna ? GO:0003735 ... A0A660JIB9 38407413
    895511 8uu7:8 (3.2) BS01 rna ? GO:0003735 ... A0A0U5AM58 38407413
    895512 8uu7:8 (3.2) BS02 ZN ? GO:0003735 ... A0A0U5AM58 38407413
    895513 8uu7:C (3.2) BS01 rna ? GO:0002181 ... A0A0U5A742 38407413
    895514 8uu7:D (3.2) BS01 rna ? GO:0003735 ... A0A0U5ADD0 38407413
    895515 8uu7:E (3.2) BS01 rna ? GO:0003735 ... A0A0U4VSH7 38407413
    895516 8uu7:F (3.2) BS01 rna ? GO:0000049 ... A0A0U5AWX6 38407413
    895517 8uu7:F (3.2) BS02 rna ? GO:0000049 ... A0A0U5AWX6 38407413
    895518 8uu7:G (3.2) BS01 rna ? GO:0002181 ... A0A0U5ALU0 38407413
    895519 8uu7:L (3.2) BS01 rna ? GO:0003729 ... A0A0U5AGN0 38407413
    895520 8uu7:M (3.2) BS01 rna ? GO:0003735 ... A0A0U5AP82 38407413
    895521 8uu7:M (3.2) BS02 rna ? GO:0003735 ... A0A0U5AP82 38407413
    895522 8uu7:N (3.2) BS01 rna ? GO:0003735 ... A0A0U5A6S7 38407413
    895523 8uu7:O (3.2) BS01 rna ? GO:0003735 ... A0A0U4VSU8 38407413
    895524 8uu7:P (3.2) BS01 rna ? GO:0003735 ... A0A0U4VSW3 38407413
    895525 8uu7:Q (3.2) BS01 rna ? GO:0003735 ... A0A0U5AR65 38407413
    895526 8uu7:Q (3.2) BS02 rna ? GO:0003735 ... A0A0U5AR65 38407413
    895527 8uu7:R (3.2) BS01 rna ? GO:0003735 ... A0A6B0JQF2 38407413
    895528 8uu7:R (3.2) BS02 rna ? GO:0003735 ... A0A6B0JQF2 38407413
    895529 8uu7:S (3.2) BS01 rna ? GO:0000027 ... A0A660JH71 38407413
    895530 8uu7:T (3.2) BS01 rna ? GO:0003723 ... A0A0U5AD18 38407413
    895531 8uu7:U (3.2) BS01 rna ? GO:0003735 ... A0A0U5ANW2 38407413
    895532 8uu7:V (3.2) BS01 rna ? GO:0003735 ... A0A0U4MTC5 38407413
    895533 8uu7:W (3.2) BS01 rna ? GO:0003723 ... A0A0U5AD05 38407413
    895534 8uu7:Y (3.2) BS01 rna ? GO:0003735 ... A0A660JMC7 38407413
    895535 8uu7:Y (3.2) BS02 rna ? GO:0003735 ... A0A660JMC7 38407413
    895536 8uu7:Z (3.2) BS01 rna ? GO:0003735 ... A0A660JJV9 38407413
    895537 8uu7:b (3.2) BS01 rna N/A GO:0003735 ... N/A 38407413
    895538 8uu7:c (3.2) BS01 rna ? GO:0003676 ... A0A0U4VSU9 38407413
    895539 8uu7:d (3.2) BS01 rna N/A GO:0003723 ... N/A 38407413
    895540 8uu7:e (3.2) BS01 rna ? GO:0003723 ... A0A0U4VSJ3 38407413
    895541 8uu7:f (3.2) BS01 rna ? GO:0003735 ... A0A7X0WKH5 38407413
    895542 8uu7:g (3.2) BS01 rna ? GO:0000049 ... A0A660JPE1 38407413
    895543 8uu7:g (3.2) BS02 rna ? GO:0000049 ... A0A660JPE1 38407413
    895544 8uu7:h (3.2) BS01 rna ? GO:0003735 ... A0A0U5A6U3 38407413
    895545 8uu7:i (3.2) BS01 rna ? GO:0003723 ... A0A0U5ADS9 38407413
    895546 8uu7:j (3.2) BS01 rna ? GO:0000049 ... A0A0U5A730 38407413
    895547 8uu7:j (3.2) BS02 MG ? GO:0000049 ... A0A0U5A730 38407413
    895548 8uu7:k (3.2) BS01 rna ? GO:0003735 ... A0A0U5AP31 38407413
    895549 8uu7:l (3.2) BS01 rna ? GO:0000049 ... A0A660JM56 38407413
    895550 8uu7:m (3.2) BS01 rna ? GO:0000049 ... A0A0U5ARJ0 38407413
    895551 8uu7:n (3.2) BS01 rna ? GO:0003735 ... A0A0U5AGZ1 38407413
    895552 8uu7:n (3.2) BS02 ZN ? GO:0003735 ... A0A0U5AGZ1 38407413
    895553 8uu7:o (3.2) BS01 rna ? GO:0003735 ... A0A660JLK4 38407413
    895554 8uu7:o (3.2) BS02 rna ? GO:0003735 ... A0A660JLK4 38407413
    895555 8uu7:p (3.2) BS01 rna ? GO:0003735 ... A0A6B0JQE1 38407413
    895556 8uu7:q (3.2) BS01 rna ? GO:0003735 ... A0A0U5ADR4 38407413
    895557 8uu7:r (3.2) BS01 rna ? GO:0003735 ... A0A660JK14 38407413
    895558 8uu7:s (3.2) BS01 rna ? GO:0000028 ... A0A0U4VSH5 38407413
    895559 8uu7:t (3.2) BS01 rna ? GO:0003723 ... A0A660JML5 38407413
    895560 8uu7:v (3.2) BS01 rna ? GO:0003924 ... Q8Y8Y0 38407413
    895561 8uu7:w (3.2) BS01 rna ? GO:0005737 ... A0A660JMK7 38407413
    895562 8uu8:1 (3.1) BS01 rna ? GO:0003735 ... A0A0U5AGL9 38407413
    895563 8uu8:2 (3.1) BS01 rna ? GO:0003735 ... A0A0U4VSJ1 38407413
    895564 8uu8:3 (3.1) BS01 rna ? GO:0003735 ... A0A0U4MT39 38407413
    895565 8uu8:4 (3.1) BS01 rna ? GO:0003735 ... A0A660JNN0 38407413
    895566 8uu8:4 (3.1) BS02 ZN ? GO:0003735 ... A0A660JNN0 38407413
    895567 8uu8:5 (3.1) BS01 rna ? GO:0003735 ... A0A660JRA4 38407413
    895568 8uu8:5 (3.1) BS02 ZN ? GO:0003735 ... A0A660JRA4 38407413
    895569 8uu8:6 (3.1) BS01 rna ? GO:0003735 ... A0A660JKZ6 38407413
    895570 8uu8:7 (3.1) BS01 rna ? GO:0003735 ... A0A660JIB9 38407413
    895571 8uu8:8 (3.1) BS01 rna ? GO:0003735 ... A0A0U5AM58 38407413
    895572 8uu8:8 (3.1) BS02 ZN ? GO:0003735 ... A0A0U5AM58 38407413
    895573 8uu8:C (3.1) BS01 rna ? GO:0002181 ... A0A0U5A742 38407413
    895574 8uu8:C (3.1) BS02 MG ? GO:0002181 ... A0A0U5A742 38407413
    895575 8uu8:D (3.1) BS01 rna ? GO:0003735 ... A0A0U5ADD0 38407413
    895576 8uu8:E (3.1) BS01 rna ? GO:0003735 ... A0A0U4VSH7 38407413
    895577 8uu8:F (3.1) BS01 rna ? GO:0000049 ... A0A0U5AWX6 38407413
    895578 8uu8:F (3.1) BS02 rna ? GO:0000049 ... A0A0U5AWX6 38407413
    895579 8uu8:G (3.1) BS01 rna ? GO:0002181 ... A0A0U5ALU0 38407413
    895580 8uu8:H (3.1) BS01 rna ? GO:0003735 ... A0A660JML6 38407413
    895581 8uu8:I (3.1) BS01 rna ? GO:0003735 ... A0A0U5A6T9 38407413
    895582 8uu8:L (3.1) BS01 rna ? GO:0003729 ... A0A0U5AGN0 38407413
    895583 8uu8:M (3.1) BS01 rna ? GO:0003735 ... A0A0U5AP82 38407413
    895584 8uu8:M (3.1) BS02 rna ? GO:0003735 ... A0A0U5AP82 38407413
    895585 8uu8:N (3.1) BS01 rna ? GO:0003735 ... A0A0U5A6S7 38407413
    895586 8uu8:O (3.1) BS01 rna ? GO:0003735 ... A0A0U4VSU8 38407413
    895587 8uu8:O (3.1) BS02 rna ? GO:0003735 ... A0A0U4VSU8 38407413
    895588 8uu8:P (3.1) BS01 rna ? GO:0003735 ... A0A0U4VSW3 38407413
    895589 8uu8:Q (3.1) BS01 rna ? GO:0003735 ... A0A0U5AR65 38407413
    895590 8uu8:Q (3.1) BS02 rna ? GO:0003735 ... A0A0U5AR65 38407413
    895591 8uu8:R (3.1) BS01 rna ? GO:0003735 ... A0A6B0JQF2 38407413
    895592 8uu8:R (3.1) BS02 rna ? GO:0003735 ... A0A6B0JQF2 38407413
    895593 8uu8:S (3.1) BS01 rna ? GO:0000027 ... A0A660JH71 38407413
    895594 8uu8:T (3.1) BS01 rna ? GO:0003723 ... A0A0U5AD18 38407413
    895595 8uu8:U (3.1) BS01 rna ? GO:0003735 ... A0A0U5ANW2 38407413
    895596 8uu8:V (3.1) BS01 rna ? GO:0003735 ... A0A0U4MTC5 38407413
    895597 8uu8:W (3.1) BS01 rna ? GO:0003723 ... A0A0U5AD05 38407413
    895598 8uu8:Y (3.1) BS01 rna ? GO:0003735 ... A0A660JMC7 38407413
    895599 8uu8:Y (3.1) BS02 rna ? GO:0003735 ... A0A660JMC7 38407413
    895600 8uu8:Z (3.1) BS01 rna ? GO:0003735 ... A0A660JJV9 38407413

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
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