SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    895601 8vty:15 (2.6) BS03 MG N/A GO:0003735 ... P80339 39039256
    895602 8vty:15 (2.6) BS04 MG N/A GO:0003735 ... P80339 39039256
    895603 8vty:15 (2.6) BS05 MG N/A GO:0003735 ... P80339 39039256
    895604 8vty:15 (2.6) BS06 ZN N/A GO:0003735 ... P80339 39039256
    895605 8vty:16 (2.6) BS01 rna N/A GO:0000049 ... P35871 39039256
    895606 8vty:16 (2.6) BS02 ZN N/A GO:0000049 ... P35871 39039256
    895607 8vty:17 (2.6) BS01 rna N/A GO:0003735 ... P80340 39039256
    895608 8vty:17 (2.6) BS02 MG N/A GO:0003735 ... P80340 39039256
    895609 8vty:17 (2.6) BS03 MG N/A GO:0003735 ... P80340 39039256
    895610 8vty:17 (2.6) BS04 MG N/A GO:0003735 ... P80340 39039256
    895611 8vty:17 (2.6) BS05 MG N/A GO:0003735 ... P80340 39039256
    895612 8vty:18 (2.6) BS01 rna N/A GO:0003735 ... Q5SKU1 39039256
    895613 8vty:18 (2.6) BS02 MG N/A GO:0003735 ... Q5SKU1 39039256
    895614 8vty:18 (2.6) BS03 MG N/A GO:0003735 ... Q5SKU1 39039256
    895615 8vty:19 (2.6) BS01 rna N/A GO:0003735 ... Q5SHR2 39039256
    895616 8vty:19 (2.6) BS02 ZN N/A GO:0003735 ... Q5SHR2 39039256
    895617 8vty:1D (2.6) BS01 rna N/A GO:0002181 ... P60405 39039256
    895618 8vty:1D (2.6) BS02 rna N/A GO:0002181 ... P60405 39039256
    895619 8vty:1D (2.6) BS03 MG N/A GO:0002181 ... P60405 39039256
    895620 8vty:1D (2.6) BS04 MG N/A GO:0002181 ... P60405 39039256
    895621 8vty:1D (2.6) BS05 MG N/A GO:0002181 ... P60405 39039256
    895622 8vty:1D (2.6) BS06 MG N/A GO:0002181 ... P60405 39039256
    895623 8vty:1D (2.6) BS07 MG N/A GO:0002181 ... P60405 39039256
    895624 8vty:1D (2.6) BS08 MG N/A GO:0002181 ... P60405 39039256
    895625 8vty:1D (2.6) BS09 MG N/A GO:0002181 ... P60405 39039256
    895626 8vty:1D (2.6) BS10 MG N/A GO:0002181 ... P60405 39039256
    895627 8vty:1D (2.6) BS11 MG N/A GO:0002181 ... P60405 39039256
    895628 8vty:1D (2.6) BS12 MG N/A GO:0002181 ... P60405 39039256
    895629 8vty:1D (2.6) BS13 MG N/A GO:0002181 ... P60405 39039256
    895630 8vty:1D (2.6) BS14 MG N/A GO:0002181 ... P60405 39039256
    895631 8vty:1E (2.6) BS01 rna N/A GO:0003735 ... Q5SHN8 39039256
    895632 8vty:1E (2.6) BS02 MG N/A GO:0003735 ... Q5SHN8 39039256
    895633 8vty:1E (2.6) BS03 MG N/A GO:0003735 ... Q5SHN8 39039256
    895634 8vty:1E (2.6) BS04 MG N/A GO:0003735 ... Q5SHN8 39039256
    895635 8vty:1E (2.6) BS05 MG N/A GO:0003735 ... Q5SHN8 39039256
    895636 8vty:1F (2.6) BS01 rna N/A GO:0003735 ... Q5SHN9 39039256
    895637 8vty:1F (2.6) BS02 MG N/A GO:0003735 ... Q5SHN9 39039256
    895638 8vty:1F (2.6) BS03 MG N/A GO:0003735 ... Q5SHN9 39039256
    895639 8vty:1F (2.6) BS04 MG N/A GO:0003735 ... Q5SHN9 39039256
    895640 8vty:1F (2.6) BS05 MG N/A GO:0003735 ... Q5SHN9 39039256
    895641 8vty:1F (2.6) BS06 MG N/A GO:0003735 ... Q5SHN9 39039256
    895642 8vty:1F (2.6) BS07 MG N/A GO:0003735 ... Q5SHN9 39039256
    895643 8vty:1F (2.6) BS08 MG N/A GO:0003735 ... Q5SHN9 39039256
    895644 8vty:1F (2.6) BS09 MG N/A GO:0003735 ... Q5SHN9 39039256
    895645 8vty:1F (2.6) BS10 MG N/A GO:0003735 ... Q5SHN9 39039256
    895646 8vty:1F (2.6) BS11 MG N/A GO:0003735 ... Q5SHN9 39039256
    895647 8vty:1F (2.6) BS12 MG N/A GO:0003735 ... Q5SHN9 39039256
    895648 8vty:1F (2.6) BS13 MG N/A GO:0003735 ... Q5SHN9 39039256
    895649 8vty:1F (2.6) BS14 MG N/A GO:0003735 ... Q5SHN9 39039256
    895650 8vty:1F (2.6) BS15 ARG N/A GO:0003735 ... Q5SHN9 39039256
    895651 8vty:1G (2.6) BS01 rna N/A GO:0000049 ... Q5SHQ0 39039256
    895652 8vty:1G (2.6) BS02 rna N/A GO:0000049 ... Q5SHQ0 39039256
    895653 8vty:1G (2.6) BS03 MG N/A GO:0000049 ... Q5SHQ0 39039256
    895654 8vty:1G (2.6) BS04 MG N/A GO:0000049 ... Q5SHQ0 39039256
    895655 8vty:1H (2.6) BS01 rna N/A GO:0002181 ... P0DOY8 39039256
    895656 8vty:1I (2.6) BS01 rna N/A GO:0003735 ... Q5SLQ1 39039256
    895657 8vty:1N (2.6) BS01 rna N/A GO:0003729 ... P60488 39039256
    895658 8vty:1N (2.6) BS02 MG N/A GO:0003729 ... P60488 39039256
    895659 8vty:1N (2.6) BS03 MG N/A GO:0003729 ... P60488 39039256
    895660 8vty:1N (2.6) BS04 MG N/A GO:0003729 ... P60488 39039256
    895661 8vty:1O (2.6) BS01 rna N/A GO:0003735 ... Q5SHP8 39039256
    895662 8vty:1O (2.6) BS02 rna N/A GO:0003735 ... Q5SHP8 39039256
    895663 8vty:1O (2.6) BS03 MG N/A GO:0003735 ... Q5SHP8 39039256
    895664 8vty:1P (2.6) BS01 rna N/A GO:0003735 ... Q5SHQ7 39039256
    895665 8vty:1P (2.6) BS02 MG N/A GO:0003735 ... Q5SHQ7 39039256
    895666 8vty:1P (2.6) BS03 MG N/A GO:0003735 ... Q5SHQ7 39039256
    895667 8vty:1Q (2.6) BS01 rna N/A GO:0000049 ... P60489 39039256
    895668 8vty:1Q (2.6) BS02 rna N/A GO:0000049 ... P60489 39039256
    895669 8vty:1Q (2.6) BS03 MG N/A GO:0000049 ... P60489 39039256
    895670 8vty:1Q (2.6) BS04 MG N/A GO:0000049 ... P60489 39039256
    895671 8vty:1Q (2.6) BS05 MG N/A GO:0000049 ... P60489 39039256
    895672 8vty:1R (2.6) BS01 rna N/A GO:0003735 ... Q9Z9H5 39039256
    895673 8vty:1R (2.6) BS02 MG N/A GO:0003735 ... Q9Z9H5 39039256
    895674 8vty:1R (2.6) BS03 MG N/A GO:0003735 ... Q9Z9H5 39039256
    895675 8vty:1R (2.6) BS04 MG N/A GO:0003735 ... Q9Z9H5 39039256
    895676 8vty:1R (2.6) BS05 MG N/A GO:0003735 ... Q9Z9H5 39039256
    895677 8vty:1S (2.6) BS01 rna N/A GO:0003735 ... Q5SHQ4 39039256
    895678 8vty:1S (2.6) BS02 rna N/A GO:0003735 ... Q5SHQ4 39039256
    895679 8vty:1T (2.6) BS01 rna N/A GO:0003735 ... P60490 39039256
    895680 8vty:1T (2.6) BS02 rna N/A GO:0003735 ... P60490 39039256
    895681 8vty:1U (2.6) BS01 rna N/A GO:0000027 ... P60491 39039256
    895682 8vty:1U (2.6) BS02 MG N/A GO:0000027 ... P60491 39039256
    895683 8vty:1U (2.6) BS03 MG N/A GO:0000027 ... P60491 39039256
    895684 8vty:1U (2.6) BS04 MG N/A GO:0000027 ... P60491 39039256
    895685 8vty:1U (2.6) BS05 MG N/A GO:0000027 ... P60491 39039256
    895686 8vty:1U (2.6) BS06 MG N/A GO:0000027 ... P60491 39039256
    895687 8vty:1U (2.6) BS07 MG N/A GO:0000027 ... P60491 39039256
    895688 8vty:1V (2.6) BS01 rna N/A GO:0003723 ... P60492 39039256
    895689 8vty:1V (2.6) BS02 MG N/A GO:0003723 ... P60492 39039256
    895690 8vty:1V (2.6) BS03 MG N/A GO:0003723 ... P60492 39039256
    895691 8vty:1V (2.6) BS04 MG N/A GO:0003723 ... P60492 39039256
    895692 8vty:1W (2.6) BS01 rna N/A GO:0003735 ... Q5SHP3 39039256
    895693 8vty:1W (2.6) BS02 MG N/A GO:0003735 ... Q5SHP3 39039256
    895694 8vty:1X (2.6) BS01 rna N/A GO:0003735 ... Q5SHP0 39039256
    895695 8vty:1Y (2.6) BS01 rna N/A GO:0003723 ... Q5SHP9 39039256
    895696 8vty:1Y (2.6) BS02 ZN N/A GO:0003723 ... Q5SHP9 39039256
    895697 8vty:1Z (2.6) BS01 rna N/A GO:0003723 ... Q5SHZ1 39039256
    895698 8vty:1Z (2.6) BS02 rna N/A GO:0003723 ... Q5SHZ1 39039256
    895699 8vty:1b (2.6) BS01 rna N/A GO:0003735 ... P80371 39039256
    895700 8vty:1b (2.6) BS02 MG N/A GO:0003735 ... P80371 39039256
    895701 8vty:1c (2.6) BS01 rna N/A GO:0003676 ... P80372 39039256
    895702 8vty:1d (2.6) BS01 rna N/A GO:0003723 ... P80373 39039256
    895703 8vty:1d (2.6) BS02 SF4 N/A GO:0003723 ... P80373 39039256
    895704 8vty:1e (2.6) BS01 rna N/A GO:0003723 ... Q5SHQ5 39039256
    895705 8vty:1e (2.6) BS02 MG N/A GO:0003723 ... Q5SHQ5 39039256
    895706 8vty:1f (2.6) BS01 rna N/A GO:0003735 ... Q5SLP8 39039256
    895707 8vty:1g (2.6) BS01 rna N/A GO:0000049 ... P17291 39039256
    895708 8vty:1h (2.6) BS01 rna N/A GO:0003735 ... P0DOY9 39039256
    895709 8vty:1i (2.6) BS01 rna N/A GO:0000049 ... P80374 39039256
    895710 8vty:1j (2.6) BS01 rna N/A GO:0000049 ... Q5SHN7 39039256
    895711 8vty:1k (2.6) BS01 rna N/A GO:0003735 ... P80376 39039256
    895712 8vty:1k (2.6) BS02 MG N/A GO:0003735 ... P80376 39039256
    895713 8vty:1l (2.6) BS01 rna N/A GO:0000049 ... Q5SHN3 39039256
    895714 8vty:1l (2.6) BS02 MG N/A GO:0000049 ... Q5SHN3 39039256
    895715 8vty:1m (2.6) BS01 rna N/A GO:0000049 ... P80377 39039256
    895716 8vty:1m (2.6) BS02 MG N/A GO:0000049 ... P80377 39039256
    895717 8vty:1m (2.6) BS03 MG N/A GO:0000049 ... P80377 39039256
    895718 8vty:1n (2.6) BS01 rna N/A GO:0003735 ... P0DOY6 39039256
    895719 8vty:1n (2.6) BS02 MG N/A GO:0003735 ... P0DOY6 39039256
    895720 8vty:1n (2.6) BS03 ZN N/A GO:0003735 ... P0DOY6 39039256
    895721 8vty:1o (2.6) BS01 rna N/A GO:0003735 ... Q5SJ76 39039256
    895722 8vty:1o (2.6) BS02 rna N/A GO:0003735 ... Q5SJ76 39039256
    895723 8vty:1p (2.6) BS01 rna N/A GO:0003735 ... Q5SJH3 39039256
    895724 8vty:1q (2.6) BS01 rna N/A GO:0003735 ... P0DOY7 39039256
    895725 8vty:1r (2.6) BS01 rna N/A GO:0003735 ... Q5SLQ0 39039256
    895726 8vty:1s (2.6) BS01 rna N/A GO:0000028 ... Q5SHP2 39039256
    895727 8vty:1t (2.6) BS01 rna N/A GO:0003723 ... P80380 39039256
    895728 8vty:1t (2.6) BS02 MG N/A GO:0003723 ... P80380 39039256
    895729 8vty:1y (2.6) BS01 rna N/A GO:0005515 ... P0AD49 39039256
    895730 8vty:1y (2.6) BS02 MG N/A GO:0005515 ... P0AD49 39039256
    895731 8vty:1y (2.6) BS03 MG N/A GO:0005515 ... P0AD49 39039256
    895732 8vty:20 (2.6) BS01 rna N/A GO:0003735 ... P60493 39039256
    895733 8vty:20 (2.6) BS02 rna N/A GO:0003735 ... P60493 39039256
    895734 8vty:21 (2.6) BS01 rna N/A GO:0003735 ... P60494 39039256
    895735 8vty:22 (2.6) BS01 rna N/A GO:0003735 ... Q5SHP6 39039256
    895736 8vty:23 (2.6) BS01 rna N/A GO:0003735 ... Q5SHQ6 39039256
    895737 8vty:23 (2.6) BS02 rna N/A GO:0003735 ... Q5SHQ6 39039256
    895738 8vty:23 (2.6) BS03 MG N/A GO:0003735 ... Q5SHQ6 39039256
    895739 8vty:24 (2.6) BS01 rna N/A GO:0003735 ... Q5SJE1 39039256
    895740 8vty:24 (2.6) BS02 ZN N/A GO:0003735 ... Q5SJE1 39039256
    895741 8vty:25 (2.6) BS01 rna N/A GO:0003735 ... P80339 39039256
    895742 8vty:25 (2.6) BS02 ZN N/A GO:0003735 ... P80339 39039256
    895743 8vty:26 (2.6) BS01 rna N/A GO:0000049 ... P35871 39039256
    895744 8vty:26 (2.6) BS02 ZN N/A GO:0000049 ... P35871 39039256
    895745 8vty:27 (2.6) BS01 rna N/A GO:0003735 ... P80340 39039256
    895746 8vty:27 (2.6) BS02 MG N/A GO:0003735 ... P80340 39039256
    895747 8vty:27 (2.6) BS03 MG N/A GO:0003735 ... P80340 39039256
    895748 8vty:28 (2.6) BS01 rna N/A GO:0003735 ... Q5SKU1 39039256
    895749 8vty:29 (2.6) BS01 rna N/A GO:0003735 ... Q5SHR2 39039256
    895750 8vty:29 (2.6) BS02 ZN N/A GO:0003735 ... Q5SHR2 39039256
    895751 8vty:2D (2.6) BS01 rna N/A GO:0002181 ... P60405 39039256
    895752 8vty:2D (2.6) BS02 rna N/A GO:0002181 ... P60405 39039256
    895753 8vty:2D (2.6) BS03 MG N/A GO:0002181 ... P60405 39039256
    895754 8vty:2D (2.6) BS04 MG N/A GO:0002181 ... P60405 39039256
    895755 8vty:2D (2.6) BS05 MG N/A GO:0002181 ... P60405 39039256
    895756 8vty:2D (2.6) BS06 MG N/A GO:0002181 ... P60405 39039256
    895757 8vty:2D (2.6) BS07 MG N/A GO:0002181 ... P60405 39039256
    895758 8vty:2D (2.6) BS08 MG N/A GO:0002181 ... P60405 39039256
    895759 8vty:2D (2.6) BS09 MG N/A GO:0002181 ... P60405 39039256
    895760 8vty:2D (2.6) BS10 MG N/A GO:0002181 ... P60405 39039256
    895761 8vty:2E (2.6) BS01 rna N/A GO:0003735 ... Q5SHN8 39039256
    895762 8vty:2E (2.6) BS02 MG N/A GO:0003735 ... Q5SHN8 39039256
    895763 8vty:2E (2.6) BS03 MG N/A GO:0003735 ... Q5SHN8 39039256
    895764 8vty:2F (2.6) BS01 rna N/A GO:0003735 ... Q5SHN9 39039256
    895765 8vty:2F (2.6) BS02 MG N/A GO:0003735 ... Q5SHN9 39039256
    895766 8vty:2F (2.6) BS03 MG N/A GO:0003735 ... Q5SHN9 39039256
    895767 8vty:2F (2.6) BS04 MG N/A GO:0003735 ... Q5SHN9 39039256
    895768 8vty:2F (2.6) BS05 MG N/A GO:0003735 ... Q5SHN9 39039256
    895769 8vty:2G (2.6) BS01 rna N/A GO:0000049 ... Q5SHQ0 39039256
    895770 8vty:2G (2.6) BS02 rna N/A GO:0000049 ... Q5SHQ0 39039256
    895771 8vty:2G (2.6) BS03 MG N/A GO:0000049 ... Q5SHQ0 39039256
    895772 8vty:2G (2.6) BS04 MG N/A GO:0000049 ... Q5SHQ0 39039256
    895773 8vty:2H (2.6) BS01 rna N/A GO:0002181 ... P0DOY8 39039256
    895774 8vty:2I (2.6) BS01 rna N/A GO:0003735 ... Q5SLQ1 39039256
    895775 8vty:2N (2.6) BS01 rna N/A GO:0003729 ... P60488 39039256
    895776 8vty:2O (2.6) BS01 rna N/A GO:0003735 ... Q5SHP8 39039256
    895777 8vty:2O (2.6) BS02 rna N/A GO:0003735 ... Q5SHP8 39039256
    895778 8vty:2P (2.6) BS01 rna N/A GO:0003735 ... Q5SHQ7 39039256
    895779 8vty:2Q (2.6) BS01 rna N/A GO:0000049 ... P60489 39039256
    895780 8vty:2Q (2.6) BS02 rna N/A GO:0000049 ... P60489 39039256
    895781 8vty:2Q (2.6) BS03 MG N/A GO:0000049 ... P60489 39039256
    895782 8vty:2Q (2.6) BS04 MG N/A GO:0000049 ... P60489 39039256
    895783 8vty:2R (2.6) BS01 rna N/A GO:0003735 ... Q9Z9H5 39039256
    895784 8vty:2S (2.6) BS01 rna N/A GO:0003735 ... Q5SHQ4 39039256
    895785 8vty:2S (2.6) BS02 rna N/A GO:0003735 ... Q5SHQ4 39039256
    895786 8vty:2T (2.6) BS01 rna N/A GO:0003735 ... P60490 39039256
    895787 8vty:2T (2.6) BS02 rna N/A GO:0003735 ... P60490 39039256
    895788 8vty:2U (2.6) BS01 rna N/A GO:0000027 ... P60491 39039256
    895789 8vty:2U (2.6) BS02 MG N/A GO:0000027 ... P60491 39039256
    895790 8vty:2V (2.6) BS01 rna N/A GO:0003723 ... P60492 39039256
    895791 8vty:2V (2.6) BS02 MG N/A GO:0003723 ... P60492 39039256
    895792 8vty:2V (2.6) BS03 MG N/A GO:0003723 ... P60492 39039256
    895793 8vty:2W (2.6) BS01 rna N/A GO:0003735 ... Q5SHP3 39039256
    895794 8vty:2W (2.6) BS02 MG N/A GO:0003735 ... Q5SHP3 39039256
    895795 8vty:2W (2.6) BS03 MG N/A GO:0003735 ... Q5SHP3 39039256
    895796 8vty:2X (2.6) BS01 rna N/A GO:0003735 ... Q5SHP0 39039256
    895797 8vty:2Y (2.6) BS01 rna N/A GO:0003723 ... Q5SHP9 39039256
    895798 8vty:2Y (2.6) BS02 ZN N/A GO:0003723 ... Q5SHP9 39039256
    895799 8vty:2Z (2.6) BS01 rna N/A GO:0003723 ... Q5SHZ1 39039256
    895800 8vty:2Z (2.6) BS02 rna N/A GO:0003723 ... Q5SHZ1 39039256

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).