SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    89401 2i0q:B (1.91) BS01 dna ? GO:0000781 ... P16458 17082188
    89402 2i0s:D (1.4) BS01 HY1 1.4.9.2 GO:0009308 ... P84887 17475620
    89403 2i0s:H (1.4) BS01 HY1 1.4.9.2 GO:0009308 ... P84887 17475620
    89404 2i0t:D (1.35) BS01 PEL 1.4.9.2 GO:0009308 ... P84887 17475620
    89405 2i0t:H (1.35) BS01 PEL 1.4.9.2 GO:0009308 ... P84887 17475620
    89406 2i0u:A (2.2) BS01 CA 3.1.1.4 GO:0004623 ... Q1RP79 N/A
    89407 2i0u:A (2.2) BS02 TRT 3.1.1.4 GO:0004623 ... Q1RP79 N/A
    89408 2i0u:A (2.2) BS03 TFA 3.1.1.4 GO:0004623 ... Q1RP79 N/A
    89409 2i0u:E (2.2) BS01 CA 3.1.1.4 GO:0004623 ... Q1RP79 N/A
    89410 2i0u:E (2.2) BS02 TRT 3.1.1.4 GO:0004623 ... Q1RP79 N/A
    89411 2i0u:E (2.2) BS03 TFA 3.1.1.4 GO:0004623 ... Q1RP79 N/A
    89412 2i0v:A (2.8) BS01 6C3 2.7.10.1 GO:0004672 ... P07333 17132624 BindingDB: IC50=160nM
    89413 2i0y:A (1.9) BS01 5CN 2.7.10.1 GO:0004672 ... P07333 17132624 BindingDB: IC50=24nM
    89414 2i0z:A (1.84) BS01 FAD ? N/A Q816V9 N/A
    89415 2i10:A (2.05) BS01 NPO ? GO:0003677 ... Q0RX74 N/A
    89416 2i10:B (2.05) BS01 NPO ? GO:0003677 ... Q0RX74 N/A
    89417 2i13:A (1.96) BS01 dna ? N/A Q07230 16963084
    89418 2i13:A (1.96) BS02 dna ? N/A Q07230 16963084
    89419 2i13:A (1.96) BS03 GOL ? N/A Q07230 16963084
    89420 2i13:A (1.96) BS04 ZN ? N/A Q07230 16963084
    89421 2i13:A (1.96) BS05 ZN ? N/A Q07230 16963084
    89422 2i13:A (1.96) BS06 ZN ? N/A Q07230 16963084
    89423 2i13:A (1.96) BS07 ZN ? N/A Q07230 16963084
    89424 2i13:A (1.96) BS08 ZN ? N/A Q07230 16963084
    89425 2i13:A (1.96) BS09 ZN ? N/A Q07230 16963084
    89426 2i13:B (1.96) BS01 dna ? N/A Q07230 16963084
    89427 2i13:B (1.96) BS02 dna ? N/A Q07230 16963084
    89428 2i13:B (1.96) BS03 ZN ? N/A Q07230 16963084
    89429 2i13:B (1.96) BS04 ZN ? N/A Q07230 16963084
    89430 2i13:B (1.96) BS05 ZN ? N/A Q07230 16963084
    89431 2i13:B (1.96) BS06 ZN ? N/A Q07230 16963084
    89432 2i13:B (1.96) BS07 ZN ? N/A Q07230 16963084
    89433 2i14:A (2.9) BS01 ZN 6.3.4.21 GO:0004514 ... Q8TZS9 N/A
    89434 2i14:A (2.9) BS02 ZN 6.3.4.21 GO:0004514 ... Q8TZS9 N/A
    89435 2i14:A (2.9) BS03 PCP 6.3.4.21 GO:0004514 ... Q8TZS9 N/A
    89436 2i14:B (2.9) BS01 ZN 6.3.4.21 GO:0004514 ... Q8TZS9 N/A
    89437 2i14:B (2.9) BS02 ZN 6.3.4.21 GO:0004514 ... Q8TZS9 N/A
    89438 2i14:B (2.9) BS03 PCP 6.3.4.21 GO:0004514 ... Q8TZS9 N/A
    89439 2i14:C (2.9) BS01 ZN 6.3.4.21 GO:0004514 ... Q8TZS9 N/A
    89440 2i14:C (2.9) BS02 ZN 6.3.4.21 GO:0004514 ... Q8TZS9 N/A
    89441 2i14:C (2.9) BS03 PCP 6.3.4.21 GO:0004514 ... Q8TZS9 N/A
    89442 2i14:D (2.9) BS01 ZN 6.3.4.21 GO:0004514 ... Q8TZS9 N/A
    89443 2i14:D (2.9) BS02 ZN 6.3.4.21 GO:0004514 ... Q8TZS9 N/A
    89444 2i14:D (2.9) BS03 PCP 6.3.4.21 GO:0004514 ... Q8TZS9 N/A
    89445 2i14:E (2.9) BS01 ZN 6.3.4.21 GO:0004514 ... Q8TZS9 N/A
    89446 2i14:E (2.9) BS02 ZN 6.3.4.21 GO:0004514 ... Q8TZS9 N/A
    89447 2i14:E (2.9) BS03 PCP 6.3.4.21 GO:0004514 ... Q8TZS9 N/A
    89448 2i14:F (2.9) BS01 ZN 6.3.4.21 GO:0004514 ... Q8TZS9 N/A
    89449 2i14:F (2.9) BS02 ZN 6.3.4.21 GO:0004514 ... Q8TZS9 N/A
    89450 2i14:F (2.9) BS03 PCP 6.3.4.21 GO:0004514 ... Q8TZS9 N/A
    89451 2i16:A (0.81) BS01 NDP 1.1.1.21
    1.1.1.300
    1.1.1.372
    1.1.1.54
    GO:0001523 ... P15121 17139089
    89452 2i16:A (0.81) BS02 LDT 1.1.1.21
    1.1.1.300
    1.1.1.372
    1.1.1.54
    GO:0001523 ... P15121 17139089 BindingDB: IC50=30nM
    89453 2i17:A (0.81) BS01 NDP 1.1.1.21
    1.1.1.300
    1.1.1.372
    1.1.1.54
    GO:0001523 ... P15121 17139089
    89454 2i17:A (0.81) BS02 LDT 1.1.1.21
    1.1.1.300
    1.1.1.372
    1.1.1.54
    GO:0001523 ... P15121 17139089 BindingDB: IC50=30nM
    89455 2i19:A (2.28) BS01 MG 2.5.1.10 GO:0004161 ... Q86C09 17090032
    89456 2i19:A (2.28) BS02 MG 2.5.1.10 GO:0004161 ... Q86C09 17090032
    89457 2i19:A (2.28) BS03 1BY 2.5.1.10 GO:0004161 ... Q86C09 17090032
    89458 2i19:B (2.28) BS01 MG 2.5.1.10 GO:0004161 ... Q86C09 17090032
    89459 2i19:B (2.28) BS02 MG 2.5.1.10 GO:0004161 ... Q86C09 17090032
    89460 2i19:B (2.28) BS03 1BY 2.5.1.10 GO:0004161 ... Q86C09 17090032
    89461 2i1m:A (1.8) BS01 5CN 2.7.10.1 GO:0004672 ... P07333 17132624 BindingDB: IC50=24nM
    89462 2i1o:A (2.4) BS01 ZN 6.3.4.21 GO:0004514 ... Q9HJ28 N/A
    89463 2i1o:A (2.4) BS02 ZN 6.3.4.21 GO:0004514 ... Q9HJ28 N/A
    89464 2i1p:A (-1.00) BS01 CA ? N/A P98158 17245526
    89465 2i1q:A (1.9) BS01 CA ? GO:0000166 ... O73948 17050545
    89466 2i1q:A (1.9) BS02 ANP ? GO:0000166 ... O73948 17050545
    89467 2i1r:A (2.2) BS01 VXR 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13
    GO:0003723 ... P26663 17049849 MOAD: ic50=9.7uM
    89468 2i1r:B (2.2) BS01 VXR 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13
    GO:0003723 ... P26663 17049849 MOAD: ic50=9.7uM
    89469 2i1v:B (2.5) BS01 FDP 2.7.1.105
    3.1.3.46
    GO:0003824 ... Q16875 17499765
    89470 2i1v:B (2.5) BS02 F6P 2.7.1.105
    3.1.3.46
    GO:0003824 ... Q16875 17499765
    89471 2i1v:B (2.5) BS03 ADP 2.7.1.105
    3.1.3.46
    GO:0003824 ... Q16875 17499765
    89472 2i1v:B (2.5) BS04 PHS 2.7.1.105
    3.1.3.46
    GO:0003824 ... Q16875 17499765
    89473 2i1x:A (2.0) BS01 RET ? GO:0005216 ... P02945 17002299
    89474 2i20:A (2.08) BS01 RET ? GO:0005216 ... P02945 17002299
    89475 2i21:A (1.84) BS01 RET ? GO:0005216 ... P02945 17002299
    89476 2i22:B (2.8) BS01 I22 5.3.1.28 GO:0005737 ... P63224 18056714
    89477 2i22:C (2.8) BS01 I22 5.3.1.28 GO:0005737 ... P63224 18056714
    89478 2i29:A (2.1) BS01 NAD 2.7.1.23 GO:0003951 ... Q8Y8D7 17686780
    89479 2i2a:A (2.1) BS01 NAP 2.7.1.23 GO:0003951 ... Q8Y8D7 17686780 MOAD: Ki=0.04mM
    89480 2i2a:A (2.1) BS02 GOL 2.7.1.23 GO:0003951 ... Q8Y8D7 17686780
    89481 2i2b:A (2.1) BS01 CC5 2.7.1.23 GO:0003951 ... Q8Y8D7 17686780
    89482 2i2b:A (2.1) BS02 CC5 2.7.1.23 GO:0003951 ... Q8Y8D7 17686780
    89483 2i2b:A (2.1) BS03 GOL 2.7.1.23 GO:0003951 ... Q8Y8D7 17686780
    89484 2i2c:A (1.85) BS01 DTA 2.7.1.23 GO:0003951 ... Q8Y8D7 17686780 MOAD: Ki=0.02mM
    89485 2i2d:A (2.22) BS01 A2D 2.7.1.23 GO:0003951 ... Q8Y8D7 17686780
    89486 2i2f:A (1.9) BS01 NAD 2.7.1.23 GO:0003951 ... Q8Y8D7 17686780
    89487 2i2f:A (1.9) BS02 GOL 2.7.1.23 GO:0003951 ... Q8Y8D7 17686780
    89488 2i2r:A (3.35) BS01 ZN ? GO:0005249 ... Q62897 17057713
    89489 2i2r:B (3.35) BS01 ZN ? GO:0005249 ... Q62897 17057713
    89490 2i2r:C (3.35) BS01 ZN ? GO:0005249 ... Q62897 17057713
    89491 2i2r:D (3.35) BS01 ZN ? GO:0005249 ... Q62897 17057713
    89492 2i2r:E (3.35) BS01 CA ? GO:0005509 ... Q9NZI2 17057713
    89493 2i2r:E (3.35) BS02 CA ? GO:0005509 ... Q9NZI2 17057713
    89494 2i2r:F (3.35) BS01 CA ? GO:0005509 ... Q9NZI2 17057713
    89495 2i2r:F (3.35) BS02 CA ? GO:0005509 ... Q9NZI2 17057713
    89496 2i2r:G (3.35) BS01 CA ? GO:0005509 ... Q9NZI2 17057713
    89497 2i2r:G (3.35) BS02 CA ? GO:0005509 ... Q9NZI2 17057713
    89498 2i2r:H (3.35) BS01 CA ? GO:0005509 ... Q9NZI2 17057713
    89499 2i2r:H (3.35) BS02 CA ? GO:0005509 ... Q9NZI2 17057713
    89500 2i2r:I (3.35) BS01 ZN ? GO:0005249 ... Q62897 17057713
    89501 2i2r:J (3.35) BS01 ZN ? GO:0005249 ... Q62897 17057713
    89502 2i2r:K (3.35) BS01 ZN ? GO:0005249 ... Q62897 17057713
    89503 2i2r:L (3.35) BS01 ZN ? GO:0005249 ... Q62897 17057713
    89504 2i2r:M (3.35) BS01 CA ? GO:0005509 ... Q9NZI2 17057713
    89505 2i2r:M (3.35) BS02 CA ? GO:0005509 ... Q9NZI2 17057713
    89506 2i2r:N (3.35) BS01 CA ? GO:0005509 ... Q9NZI2 17057713
    89507 2i2r:N (3.35) BS02 CA ? GO:0005509 ... Q9NZI2 17057713
    89508 2i2r:O (3.35) BS01 CA ? GO:0005509 ... Q9NZI2 17057713
    89509 2i2r:O (3.35) BS02 CA ? GO:0005509 ... Q9NZI2 17057713
    89510 2i2r:P (3.35) BS01 CA ? GO:0005509 ... Q9NZI2 17057713
    89511 2i2r:P (3.35) BS02 CA ? GO:0005509 ... Q9NZI2 17057713
    89512 2i2s:A (2.3) BS01 MNA ? GO:0019028 ... P0C6Y8 17306299
    89513 2i2s:A (2.3) BS02 MNA ? GO:0019028 ... P0C6Y8 17306299
    89514 2i2s:B (2.3) BS01 MNA ? GO:0019028 ... P0C6Y8 17306299
    89515 2i2s:B (2.3) BS02 MNA ? GO:0019028 ... P0C6Y8 17306299
    89516 2i2x:A (2.5) BS01 ZN 2.1.1.90 GO:0005515 ... Q46EH3 17142327
    89517 2i2x:A (2.5) BS02 ZN 2.1.1.90 GO:0005515 ... Q46EH3 17142327
    89518 2i2x:A (2.5) BS03 B13 2.1.1.90 GO:0005515 ... Q46EH3 17142327
    89519 2i2x:B (2.5) BS01 B13 2.1.1.90 GO:0005515 ... Q46EH4 17142327
    89520 2i2x:C (2.5) BS01 ZN 2.1.1.90 GO:0005515 ... Q46EH3 17142327
    89521 2i2x:C (2.5) BS02 ZN 2.1.1.90 GO:0005515 ... Q46EH3 17142327
    89522 2i2x:C (2.5) BS03 B13 2.1.1.90 GO:0005515 ... Q46EH3 17142327
    89523 2i2x:D (2.5) BS01 B13 2.1.1.90 GO:0005515 ... Q46EH4 17142327
    89524 2i2x:E (2.5) BS01 ZN 2.1.1.90 GO:0005515 ... Q46EH3 17142327
    89525 2i2x:E (2.5) BS02 ZN 2.1.1.90 GO:0005515 ... Q46EH3 17142327
    89526 2i2x:E (2.5) BS03 B13 2.1.1.90 GO:0005515 ... Q46EH3 17142327
    89527 2i2x:F (2.5) BS01 B13 2.1.1.90 GO:0005515 ... Q46EH4 17142327
    89528 2i2x:G (2.5) BS01 ZN 2.1.1.90 GO:0005515 ... Q46EH3 17142327
    89529 2i2x:G (2.5) BS02 ZN 2.1.1.90 GO:0005515 ... Q46EH3 17142327
    89530 2i2x:G (2.5) BS03 B13 2.1.1.90 GO:0005515 ... Q46EH3 17142327
    89531 2i2x:H (2.5) BS01 B13 2.1.1.90 GO:0005515 ... Q46EH4 17142327
    89532 2i2x:I (2.5) BS01 ZN 2.1.1.90 GO:0005515 ... Q46EH3 17142327
    89533 2i2x:I (2.5) BS02 ZN 2.1.1.90 GO:0005515 ... Q46EH3 17142327
    89534 2i2x:I (2.5) BS03 B13 2.1.1.90 GO:0005515 ... Q46EH3 17142327
    89535 2i2x:J (2.5) BS01 B13 2.1.1.90 GO:0005515 ... Q46EH4 17142327
    89536 2i2x:K (2.5) BS01 ZN 2.1.1.90 GO:0005515 ... Q46EH3 17142327
    89537 2i2x:K (2.5) BS02 ZN 2.1.1.90 GO:0005515 ... Q46EH3 17142327
    89538 2i2x:K (2.5) BS03 B13 2.1.1.90 GO:0005515 ... Q46EH3 17142327
    89539 2i2x:L (2.5) BS01 B13 2.1.1.90 GO:0005515 ... Q46EH4 17142327
    89540 2i2x:M (2.5) BS01 ZN 2.1.1.90 GO:0005515 ... Q46EH3 17142327
    89541 2i2x:M (2.5) BS02 ZN 2.1.1.90 GO:0005515 ... Q46EH3 17142327
    89542 2i2x:M (2.5) BS03 B13 2.1.1.90 GO:0005515 ... Q46EH3 17142327
    89543 2i2x:N (2.5) BS01 B13 2.1.1.90 GO:0005515 ... Q46EH4 17142327
    89544 2i2x:O (2.5) BS01 ZN 2.1.1.90 GO:0005515 ... Q46EH3 17142327
    89545 2i2x:O (2.5) BS02 ZN 2.1.1.90 GO:0005515 ... Q46EH3 17142327
    89546 2i2x:O (2.5) BS03 B13 2.1.1.90 GO:0005515 ... Q46EH3 17142327
    89547 2i2x:P (2.5) BS01 B13 2.1.1.90 GO:0005515 ... Q46EH4 17142327
    89548 2i2y:A (-1.00) BS01 rna ? GO:0003676 ... P19909
    P84103
    17036044
    89549 2i30:A (2.9) BS01 SAL ? GO:0003677 ... P02768 17067818 BindingDB: Ki=5888436553556nM
    89550 2i32:A (2.7) BS01 peptide ? GO:0005634 ... Q9Y294 16980972
    89551 2i32:A (2.7) BS02 peptide ? GO:0005634 ... Q9Y294 16980972
    89552 2i32:B (2.7) BS01 peptide ? GO:0005634 ... Q9Y294 16980972
    89553 2i33:A (1.57) BS01 MG 3.1.3.2 GO:0009279 ... A0A6L7HE29 N/A
    89554 2i33:B (1.57) BS01 MG 3.1.3.2 GO:0009279 ... A0A6L7HE29 N/A
    89555 2i34:A (2.0) BS01 MG 3.1.3.2 GO:0009279 ... A0A6L7HE29 N/A
    89556 2i34:A (2.0) BS02 WO4 3.1.3.2 GO:0009279 ... A0A6L7HE29 N/A
    89557 2i34:B (2.0) BS01 MG 3.1.3.2 GO:0009279 ... A0A6L7HE29 N/A
    89558 2i34:B (2.0) BS02 WO4 3.1.3.2 GO:0009279 ... A0A6L7HE29 N/A
    89559 2i35:A (3.8) BS01 RET ? GO:0000139 ... P02699 17060607
    89560 2i3c:A (2.8) BS01 ZN 3.5.1.15 GO:0005515 ... P45381 17194761
    89561 2i3c:B (2.8) BS01 ZN 3.5.1.15 GO:0005515 ... P45381 17194761
    89562 2i3g:A (1.85) BS01 NAP 1.2.1.38 GO:0003942 ... P9WPZ9 17316682
    89563 2i3g:B (1.85) BS01 NAP 1.2.1.38 GO:0003942 ... P9WPZ9 17316682
    89564 2i3h:A (1.62) BS01 peptide 2.3.2.27 N/A Q96CA5 17168540
    89565 2i3h:A (1.62) BS02 ZN 2.3.2.27 N/A Q96CA5 17168540
    89566 2i3h:B (1.62) BS01 peptide 2.3.2.27 N/A Q96CA5 17168540
    89567 2i3h:B (1.62) BS02 ZN 2.3.2.27 N/A Q96CA5 17168540
    89568 2i3i:A (2.3) BS01 ZN 2.3.2.27 N/A Q96CA5 17168540
    89569 2i3i:A (2.3) BS02 618 2.3.2.27 N/A Q96CA5 17168540 MOAD: Ki=0.05uM
    89570 2i3i:B (2.3) BS01 ZN 2.3.2.27 N/A Q96CA5 17168540
    89571 2i3i:B (2.3) BS02 618 2.3.2.27 N/A Q96CA5 17168540 MOAD: Ki=0.05uM
    89572 2i3p:A (2.3) BS01 dna 3.1.-.- GO:0004519 ... P05725 16971456
    89573 2i3p:A (2.3) BS02 dna 3.1.-.- GO:0004519 ... P05725 16971456
    89574 2i3p:B (2.3) BS01 dna 3.1.-.- GO:0004519 ... P05725 16971456
    89575 2i3p:B (2.3) BS02 dna 3.1.-.- GO:0004519 ... P05725 16971456
    89576 2i3q:A (2.3) BS01 dna 3.1.-.- GO:0004519 ... P05725 16971456
    89577 2i3q:A (2.3) BS02 dna 3.1.-.- GO:0004519 ... P05725 16971456
    89578 2i3q:B (2.3) BS01 dna 3.1.-.- GO:0004519 ... P05725 16971456
    89579 2i3q:B (2.3) BS02 dna 3.1.-.- GO:0004519 ... P05725 16971456
    89580 2i3v:A (2.4) BS01 ZN ? GO:0015276 ... P19491 17018279
    89581 2i3v:A (2.4) BS02 GLU ? GO:0015276 ... P19491 17018279
    89582 2i3v:B (2.4) BS01 GLU ? GO:0015276 ... P19491 17018279
    89583 2i3v:C (2.4) BS01 ZN ? GO:0015276 ... P19491 17018279
    89584 2i3v:C (2.4) BS02 GLU ? GO:0015276 ... P19491 17018279
    89585 2i3v:D (2.4) BS01 GLU ? GO:0015276 ... P19491 17018279
    89586 2i3w:A (2.3) BS01 GLU ? GO:0015276 ... P19491 17018279
    89587 2i3w:B (2.3) BS01 GLU ? GO:0015276 ... P19491 17018279
    89588 2i3z:A (2.9) BS01 LIR 3.4.14.5 GO:0002020 ... P14740 17010607
    89589 2i40:A (2.8) BS01 BLZ 2.7.11.22 GO:0000082 ... P24941 16997559
    89590 2i40:C (2.8) BS01 BLZ 2.7.11.22 GO:0000082 ... P24941 16997559
    89591 2i42:A (2.2) BS01 VO4 3.1.3.48 GO:0004725 ... P15273 N/A
    89592 2i44:A (2.04) BS01 CA ? GO:0004722 ... Q8WPN9 18058037
    89593 2i44:A (2.04) BS02 CA ? GO:0004722 ... Q8WPN9 18058037
    89594 2i44:B (2.04) BS01 CA ? GO:0004722 ... Q8WPN9 18058037
    89595 2i44:B (2.04) BS02 CA ? GO:0004722 ... Q8WPN9 18058037
    89596 2i44:C (2.04) BS01 CA ? GO:0004722 ... Q8WPN9 18058037
    89597 2i44:C (2.04) BS02 CA ? GO:0004722 ... Q8WPN9 18058037
    89598 2i47:A (1.9) BS01 ZN 3.4.24.86 GO:0004222 ... P78536 17064892
    89599 2i47:A (1.9) BS02 INN 3.4.24.86 GO:0004222 ... P78536 17064892
    89600 2i47:B (1.9) BS01 ZN 3.4.24.86 GO:0004222 ... P78536 17064892

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).