SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    897201 8uy3:A (3.2) BS02 ZN N/A N/A Q9Z2G0 39642856
    897202 8uy3:B (3.2) BS01 peptide N/A N/A Q9Z2G0 39642856
    897203 8uy3:B (3.2) BS02 ZN N/A N/A Q9Z2G0 39642856
    897204 8uy3:C (3.2) BS01 peptide N/A N/A Q9Z2G0 39642856
    897205 8uy3:C (3.2) BS02 ZN N/A N/A Q9Z2G0 39642856
    897206 8uy3:D (3.2) BS01 peptide N/A N/A Q9Z2G0 39642856
    897207 8uy3:D (3.2) BS02 ZN N/A N/A Q9Z2G0 39642856
    897208 8uy4:A (3.08) BS01 peptide N/A N/A A0A5K6CSR3 39379370
    897209 8uy4:A (3.08) BS02 peptide N/A N/A A0A5K6CSR3 39379370
    897210 8uy4:A (3.08) BS03 peptide N/A N/A A0A5K6CSR3 39379370
    897211 8uy6:A (1.9) BS01 CDL N/A GO:0005515 ... P60844 38361954
    897212 8uy6:C (1.9) BS01 CDL N/A GO:0005515 ... P60844 38361954
    897213 8uy6:E (1.9) BS01 CDL N/A GO:0005515 ... P60844 38361954
    897214 8uy6:G (1.9) BS01 CDL N/A GO:0005515 ... P60844 38361954
    897215 8uy6:I (1.9) BS01 CDL N/A GO:0005515 ... P60844 38361954
    897216 8uy6:K (1.9) BS01 CDL N/A GO:0005515 ... P60844 38361954
    897217 8uy6:M (1.9) BS01 CDL N/A GO:0005515 ... P60844 38361954
    897218 8uy6:O (1.9) BS01 CDL N/A GO:0005515 ... P60844 38361954
    897219 8uy7:A (2.93) BS01 MG N/A GO:0000166 ... P0ABB8 40550995
    897220 8uy7:B (2.93) BS01 MG N/A GO:0000166 ... P0ABB8 40550995
    897221 8uy8:A (3.03) BS01 MG N/A GO:0000166 ... P0ABB8 40550995
    897222 8uy8:B (3.03) BS01 MG N/A GO:0000166 ... P0ABB8 40550995
    897223 8uya:A (3.72) BS01 ATP N/A GO:0000166 ... P0ABB8 40550995
    897224 8uya:B (3.72) BS01 ATP N/A GO:0000166 ... P0ABB8 40550995
    897225 8uyb:A (3.87) BS01 MG N/A GO:0000166 ... P0ABB8 40550995
    897226 8uyb:A (3.87) BS02 MG N/A GO:0000166 ... P0ABB8 40550995
    897227 8uyb:A (3.87) BS03 MG N/A GO:0000166 ... P0ABB8 40550995
    897228 8uyb:A (3.87) BS04 AGS N/A GO:0000166 ... P0ABB8 40550995
    897229 8uyb:B (3.87) BS01 MG N/A GO:0000166 ... P0ABB8 40550995
    897230 8uyb:B (3.87) BS02 MG N/A GO:0000166 ... P0ABB8 40550995
    897231 8uyb:B (3.87) BS03 MG N/A GO:0000166 ... P0ABB8 40550995
    897232 8uyb:B (3.87) BS04 AGS N/A GO:0000166 ... P0ABB8 40550995
    897233 8uyc:A (3.75) BS01 MG N/A GO:0000166 ... P0ABB8 40550995
    897234 8uyc:B (3.75) BS01 MG N/A GO:0000166 ... P0ABB8 40550995
    897235 8uyd:A (5.3) BS01 ADP ? GO:0000146 ... A0A8W4F696 38387550
    897236 8uyd:B (5.3) BS01 ADP ? GO:0000146 ... A0A8W4F696 38387550
    897237 8uyh:A (2.84) BS01 ANP 2.7.11.1 GO:0004672 ... E0W1I1 38241364
    897238 8uyh:B (2.84) BS01 ANP 2.7.11.1 GO:0004672 ... E0W1I1 38241364
    897239 8uyh:B (2.84) BS02 MG 2.7.11.1 GO:0004672 ... E0W1I1 38241364
    897240 8uyi:A (3.13) BS01 ADP 2.7.11.1 GO:0004672 ... E0W1I1 38241364
    897241 8uyi:A (3.13) BS02 MG 2.7.11.1 GO:0004672 ... E0W1I1 38241364
    897242 8uyi:B (3.13) BS01 ADP 2.7.11.1 GO:0004672 ... E0W1I1 38241364
    897243 8uyi:B (3.13) BS02 MG 2.7.11.1 GO:0004672 ... E0W1I1 38241364
    897244 8uyn:A (2.0) BS01 4OL N/A GO:0002020 ... P80188 39009580
    897245 8uyn:B (2.0) BS01 4OL N/A GO:0002020 ... P80188 39009580
    897246 8uyn:C (2.0) BS01 PIN N/A GO:0002020 ... P80188 39009580
    897247 8uyn:C (2.0) BS02 4OL N/A GO:0002020 ... P80188 39009580
    897248 8uyq:A (3.5) BS01 XVT N/A GO:0004930 ... N/A 39478229
    897249 8uyr:A (1.82) BS01 MN N/A GO:0005737 ... A0AA46WUS1 N/A
    897250 8uyr:A (1.82) BS02 MN N/A GO:0005737 ... A0AA46WUS1 N/A
    897251 8uyr:B (1.82) BS01 MN N/A GO:0005737 ... A0AA46WUS1 N/A
    897252 8uyr:B (1.82) BS02 MN N/A GO:0005737 ... A0AA46WUS1 N/A
    897253 8uz0:J (2.8) BS01 ADP 3.6.4.- GO:0001725 ... P68139 38448439
    897254 8uz0:K (2.8) BS01 ADP 3.6.4.- GO:0001725 ... P68139 38448439
    897255 8uz0:L (2.8) BS01 ADP 3.6.4.- GO:0001725 ... P68139 38448439
    897256 8uz0:M (2.8) BS01 ADP 3.6.4.- GO:0001725 ... P68139 38448439
    897257 8uz0:N (2.8) BS01 ADP 3.6.4.- GO:0001725 ... P68139 38448439
    897258 8uz0:O (2.8) BS01 ADP 3.6.4.- GO:0001725 ... P68139 38448439
    897259 8uz0:P (2.8) BS01 ADP 3.6.4.- GO:0001725 ... P68139 38448439
    897260 8uz0:Q (2.8) BS01 ADP 3.6.4.- GO:0001725 ... P68139 38448439
    897261 8uz0:R (2.8) BS01 ADP 3.6.4.- GO:0001725 ... P68139 38448439
    897262 8uz1:J (3.6) BS01 ADP 3.6.4.- GO:0001725 ... P68139 38448439
    897263 8uz1:J (3.6) BS02 MG 3.6.4.- GO:0001725 ... P68139 38448439
    897264 8uz1:J (3.6) BS03 BEF 3.6.4.- GO:0001725 ... P68139 38448439
    897265 8uz1:K (3.6) BS01 ADP 3.6.4.- GO:0001725 ... P68139 38448439
    897266 8uz1:K (3.6) BS02 BEF 3.6.4.- GO:0001725 ... P68139 38448439
    897267 8uz1:L (3.6) BS01 ADP 3.6.4.- GO:0001725 ... P68139 38448439
    897268 8uz1:L (3.6) BS02 BEF 3.6.4.- GO:0001725 ... P68139 38448439
    897269 8uz1:M (3.6) BS01 ADP 3.6.4.- GO:0001725 ... P68139 38448439
    897270 8uz1:M (3.6) BS02 BEF 3.6.4.- GO:0001725 ... P68139 38448439
    897271 8uz1:N (3.6) BS01 ADP 3.6.4.- GO:0001725 ... P68139 38448439
    897272 8uz1:N (3.6) BS02 BEF 3.6.4.- GO:0001725 ... P68139 38448439
    897273 8uz1:O (3.6) BS01 ADP 3.6.4.- GO:0001725 ... P68139 38448439
    897274 8uz1:O (3.6) BS02 BEF 3.6.4.- GO:0001725 ... P68139 38448439
    897275 8uz1:P (3.6) BS01 ADP 3.6.4.- GO:0001725 ... P68139 38448439
    897276 8uz1:P (3.6) BS02 BEF 3.6.4.- GO:0001725 ... P68139 38448439
    897277 8uz1:Q (3.6) BS01 ADP 3.6.4.- GO:0001725 ... P68139 38448439
    897278 8uz1:Q (3.6) BS02 BEF 3.6.4.- GO:0001725 ... P68139 38448439
    897279 8uz1:R (3.6) BS01 ADP 3.6.4.- GO:0001725 ... P68139 38448439
    897280 8uz1:R (3.6) BS02 BEF 3.6.4.- GO:0001725 ... P68139 38448439
    897281 8uz2:B (3.18) BS01 BTN N/A GO:0003989 ... P0ABD8 N/A
    897282 8uz2:C (3.18) BS01 peptide N/A GO:0003824 ... P24182 N/A
    897283 8uz2:C (3.18) BS02 ADP N/A GO:0003824 ... P24182 N/A
    897284 8uz2:C (3.18) BS03 MG N/A GO:0003824 ... P24182 N/A
    897285 8uz2:D (3.18) BS01 ZN N/A GO:0003677 ... P0A9Q5 N/A
    897286 8uz2:D (3.18) BS02 ACO N/A GO:0003677 ... P0A9Q5 N/A
    897287 8uz2:F (3.18) BS01 BTN N/A GO:0003989 ... P0ABD8 N/A
    897288 8uz2:G (3.18) BS01 peptide N/A GO:0003824 ... P24182 N/A
    897289 8uz2:G (3.18) BS02 ADP N/A GO:0003824 ... P24182 N/A
    897290 8uz2:G (3.18) BS03 MG N/A GO:0003824 ... P24182 N/A
    897291 8uz2:H (3.18) BS01 ZN N/A GO:0003677 ... P0A9Q5 N/A
    897292 8uz2:H (3.18) BS02 ACO N/A GO:0003677 ... P0A9Q5 N/A
    897293 8uz3:A (3.2) BS01 rna N/A GO:0000027 ... P0A7L0 N/A
    897294 8uz3:B (3.2) BS01 rna N/A GO:0000027 ... P60422 N/A
    897295 8uz3:C (3.2) BS01 rna N/A GO:0000027 ... P60438 N/A
    897296 8uz3:D (3.2) BS01 rna N/A GO:0001070 ... P60723 N/A
    897297 8uz3:E (3.2) BS01 rna N/A GO:0000027 ... P62399 N/A
    897298 8uz3:E (3.2) BS02 rna N/A GO:0000027 ... P62399 N/A
    897299 8uz3:E (3.2) BS03 MG N/A GO:0000027 ... P62399 N/A
    897300 8uz3:F (3.2) BS01 rna N/A GO:0000027 ... P0AG55 N/A
    897301 8uz3:G (3.2) BS01 rna N/A GO:0002181 ... P0A7R1 N/A
    897302 8uz3:J (3.2) BS01 rna N/A GO:0002181 ... P0AA10 N/A
    897303 8uz3:J (3.2) BS02 MG N/A GO:0002181 ... P0AA10 N/A
    897304 8uz3:K (3.2) BS01 rna N/A GO:0002181 ... P0ADY3 N/A
    897305 8uz3:K (3.2) BS02 rna N/A GO:0002181 ... P0ADY3 N/A
    897306 8uz3:L (3.2) BS01 rna N/A GO:0002181 ... P02413 N/A
    897307 8uz3:M (3.2) BS01 rna N/A GO:0000027 ... P0ADY7 N/A
    897308 8uz3:M (3.2) BS02 rna N/A GO:0000027 ... P0ADY7 N/A
    897309 8uz3:M (3.2) BS03 MG N/A GO:0000027 ... P0ADY7 N/A
    897310 8uz3:N (3.2) BS01 rna N/A GO:0000027 ... P0AG44 N/A
    897311 8uz3:O (3.2) BS01 rna N/A GO:0002181 ... P0C018 N/A
    897312 8uz3:O (3.2) BS02 rna N/A GO:0002181 ... P0C018 N/A
    897313 8uz3:P (3.2) BS01 rna N/A GO:0000027 ... P0A7K6 N/A
    897314 8uz3:P (3.2) BS02 rna N/A GO:0000027 ... P0A7K6 N/A
    897315 8uz3:Q (3.2) BS01 rna N/A GO:0000027 ... P0A7L3 N/A
    897316 8uz3:R (3.2) BS01 rna N/A GO:0002181 ... P0AG48 N/A
    897317 8uz3:S (3.2) BS01 rna N/A GO:0002181 ... P61175 N/A
    897318 8uz3:T (3.2) BS01 rna N/A GO:0000027 ... P0ADZ0 N/A
    897319 8uz3:U (3.2) BS01 rna N/A GO:0000027 ... P60624 N/A
    897320 8uz3:V (3.2) BS01 rna N/A GO:0000027 ... P68919 N/A
    897321 8uz3:V (3.2) BS02 rna N/A GO:0000027 ... P68919 N/A
    897322 8uz3:W (3.2) BS01 rna N/A GO:0000027 ... P0A7L8 N/A
    897323 8uz3:W (3.2) BS02 rna N/A GO:0000027 ... P0A7L8 N/A
    897324 8uz3:X (3.2) BS01 rna N/A GO:0000027 ... P0A7M2 N/A
    897325 8uz3:Y (3.2) BS01 rna N/A GO:0000027 ... P0A7M6 N/A
    897326 8uz3:Z (3.2) BS01 rna N/A GO:0000027 ... P0AG51 N/A
    897327 8uz3:b (3.2) BS01 rna N/A GO:0000027 ... P0A7N4 N/A
    897328 8uz3:c (3.2) BS01 rna N/A GO:0000027 ... P0A7N9 N/A
    897329 8uz3:d (3.2) BS01 rna N/A GO:0002181 ... P0A7P5 N/A
    897330 8uz3:e (3.2) BS01 rna N/A GO:0002181 ... P0A7Q1 N/A
    897331 8uz3:f (3.2) BS01 rna N/A GO:0002181 ... P0A7Q6 N/A
    897332 8uz3:h (3.2) BS01 rna N/A GO:0003676 ... P0A7V3 N/A
    897333 8uz3:i (3.2) BS01 rna N/A GO:0000028 ... P0A7V8 N/A
    897334 8uz3:j (3.2) BS01 rna N/A GO:0000028 ... P0A7W1 N/A
    897335 8uz3:k (3.2) BS01 rna N/A GO:0002181 ... P02358 N/A
    897336 8uz3:l (3.2) BS01 rna N/A GO:0000028 ... P02359 N/A
    897337 8uz3:m (3.2) BS01 rna N/A GO:0000028 ... P0A7W7 N/A
    897338 8uz3:n (3.2) BS01 rna N/A GO:0002181 ... P0A7X3 N/A
    897339 8uz3:o (3.2) BS01 rna N/A GO:0000049 ... P0A7R5 N/A
    897340 8uz3:p (3.2) BS01 rna N/A GO:0002181 ... P0A7R9 N/A
    897341 8uz3:q (3.2) BS01 rna N/A GO:0000049 ... P0A7S3 N/A
    897342 8uz3:r (3.2) BS01 rna N/A GO:0000049 ... P0A7S9 N/A
    897343 8uz3:r (3.2) BS02 MG N/A GO:0000049 ... P0A7S9 N/A
    897344 8uz3:s (3.2) BS01 rna N/A GO:0000028 ... P0AG59 N/A
    897345 8uz3:t (3.2) BS01 rna N/A GO:0000028 ... P0ADZ4 N/A
    897346 8uz3:t (3.2) BS02 rna N/A GO:0000028 ... P0ADZ4 N/A
    897347 8uz3:u (3.2) BS01 rna N/A GO:0000028 ... P0A7T3 N/A
    897348 8uz3:v (3.2) BS01 rna N/A GO:0000028 ... P0AG63 N/A
    897349 8uz3:w (3.2) BS01 rna N/A GO:0002181 ... P0A7T7 N/A
    897350 8uz3:x (3.2) BS01 rna N/A GO:0002181 ... P0A7U3 N/A
    897351 8uz3:y (3.2) BS01 rna N/A GO:0000028 ... P0A7U7 N/A
    897352 8uz3:z (3.2) BS01 rna N/A GO:0000028 ... P68679 N/A
    897353 8uz5:A (5.9) BS01 ADP ? GO:0000146 ... A0A8W4F696 38387550
    897354 8uz5:B (5.9) BS01 ADP ? GO:0000146 ... A0A8W4F696 38387550
    897355 8uz6:A (7.1) BS01 ADP ? GO:0000146 ... A0A8W4F696 38387550
    897356 8uz6:B (7.1) BS01 ADP ? GO:0000146 ... A0A8W4F696 38387550
    897357 8uz9:A (2.08) BS01 4OL N/A GO:0002020 ... P80188 39009580
    897358 8uz9:B (2.08) BS01 4OL N/A GO:0002020 ... P80188 39009580
    897359 8uz9:C (2.08) BS01 4OL N/A GO:0002020 ... P80188 39009580
    897360 8uza:A (3.17) BS01 rna 3.1.-.- GO:0003676 ... A0A150MP45 38781968
    897361 8uza:A (3.17) BS02 dna 3.1.-.- GO:0003676 ... A0A150MP45 38781968
    897362 8uza:A (3.17) BS03 dna 3.1.-.- GO:0003676 ... A0A150MP45 38781968
    897363 8uzb:A (2.63) BS01 rna 3.1.-.- GO:0003676 ... A0A150MP45 38781968
    897364 8uzb:A (2.63) BS02 dna 3.1.-.- GO:0003676 ... A0A150MP45 38781968
    897365 8uzb:A (2.63) BS03 dna 3.1.-.- GO:0003676 ... A0A150MP45 38781968
    897366 8uzd:A (2.721) BS01 SAH N/A GO:0008168 ... A0AAN0NPC3 39773819
    897367 8uzd:A (2.721) BS02 CFF N/A GO:0008168 ... A0AAN0NPC3 39773819
    897368 8uzd:B (2.721) BS01 SAH N/A GO:0008168 ... A0AAN0NPC3 39773819
    897369 8uzd:B (2.721) BS02 CFF N/A GO:0008168 ... A0AAN0NPC3 39773819
    897370 8uze:A (3.03) BS01 ZN N/A GO:0006508 ... Q8R0I0
    Q9BYF1
    39083418
    897371 8uze:B (3.03) BS01 ZN N/A GO:0006508 ... Q8R0I0
    Q9BYF1
    39083418
    897372 8uzf:A (3.283) BS01 ZN N/A GO:0006508 ... Q8R0I0
    Q9BYF1
    39083418
    897373 8uzf:B (3.283) BS01 ZN N/A GO:0006508 ... Q8R0I0
    Q9BYF1
    39083418
    897374 8uzg:A (3.7) BS01 rna N/A GO:0000027 ... P0A7L0 40789848
    897375 8uzg:A (3.7) BS02 rna N/A GO:0000027 ... P0A7L0 40789848
    897376 8uzg:B (3.7) BS01 rna N/A GO:0000027 ... P60422 40789848
    897377 8uzg:B (3.7) BS02 MG N/A GO:0000027 ... P60422 40789848
    897378 8uzg:C (3.7) BS01 rna N/A GO:0000027 ... P60438 40789848
    897379 8uzg:D (3.7) BS01 rna N/A GO:0001070 ... P60723 40789848
    897380 8uzg:E (3.7) BS01 rna N/A GO:0000027 ... P62399 40789848
    897381 8uzg:E (3.7) BS02 rna N/A GO:0000027 ... P62399 40789848
    897382 8uzg:F (3.7) BS01 rna N/A GO:0000027 ... P0AG55 40789848
    897383 8uzg:G (3.7) BS01 rna N/A GO:0002181 ... P0A7R1 40789848
    897384 8uzg:J (3.7) BS01 rna N/A GO:0002181 ... P0AA10 40789848
    897385 8uzg:J (3.7) BS02 MG N/A GO:0002181 ... P0AA10 40789848
    897386 8uzg:K (3.7) BS01 rna N/A GO:0002181 ... P0ADY3 40789848
    897387 8uzg:K (3.7) BS02 rna N/A GO:0002181 ... P0ADY3 40789848
    897388 8uzg:L (3.7) BS01 rna N/A GO:0002181 ... P02413 40789848
    897389 8uzg:M (3.7) BS01 rna N/A GO:0000027 ... P0ADY7 40789848
    897390 8uzg:M (3.7) BS02 rna N/A GO:0000027 ... P0ADY7 40789848
    897391 8uzg:N (3.7) BS01 rna N/A GO:0000027 ... P0AG44 40789848
    897392 8uzg:N (3.7) BS02 MG N/A GO:0000027 ... P0AG44 40789848
    897393 8uzg:O (3.7) BS01 rna N/A GO:0002181 ... P0C018 40789848
    897394 8uzg:O (3.7) BS02 rna N/A GO:0002181 ... P0C018 40789848
    897395 8uzg:P (3.7) BS01 rna N/A GO:0000027 ... P0A7K6 40789848
    897396 8uzg:P (3.7) BS02 rna N/A GO:0000027 ... P0A7K6 40789848
    897397 8uzg:Q (3.7) BS01 rna N/A GO:0000027 ... P0A7L3 40789848
    897398 8uzg:R (3.7) BS01 rna N/A GO:0002181 ... P0AG48 40789848
    897399 8uzg:S (3.7) BS01 rna N/A GO:0002181 ... P61175 40789848
    897400 8uzg:T (3.7) BS01 rna N/A GO:0000027 ... P0ADZ0 40789848

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).