SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    898401 8wa2:F (3.0) BS34 CA ? N/A A8J9H7 38552612
    898402 8wa2:F (3.0) BS35 GLA ? N/A A8J9H7 38552612
    898403 8wa2:F (3.0) BS36 GLA ? N/A A8J9H7 38552612
    898404 8wa2:F (3.0) BS37 GLA ? N/A A8J9H7 38552612
    898405 8wa2:F (3.0) BS38 GLA ? N/A A8J9H7 38552612
    898406 8wa2:F (3.0) BS39 GLA ? N/A A8J9H7 38552612
    898407 8wa2:F (3.0) BS40 GLA ? N/A A8J9H7 38552612
    898408 8wa2:F (3.0) BS41 GLA ? N/A A8J9H7 38552612
    898409 8wa2:F (3.0) BS42 GLA ? N/A A8J9H7 38552612
    898410 8wa2:F (3.0) BS43 GLA ? N/A A8J9H7 38552612
    898411 8wa2:F (3.0) BS44 GLA ? N/A A8J9H7 38552612
    898412 8wa2:F (3.0) BS45 GLA ? N/A A8J9H7 38552612
    898413 8wa2:F (3.0) BS46 GLA ? N/A A8J9H7 38552612
    898414 8wa2:G (3.0) BS01 FUB N/A N/A N/A 38552612
    898415 8wa2:G (3.0) BS02 FUB N/A N/A N/A 38552612
    898416 8wa2:G (3.0) BS03 GZL N/A N/A N/A 38552612
    898417 8wa2:G (3.0) BS04 FUB N/A N/A N/A 38552612
    898418 8wa2:G (3.0) BS05 GZL N/A N/A N/A 38552612
    898419 8wa2:G (3.0) BS06 FUB N/A N/A N/A 38552612
    898420 8wa2:G (3.0) BS07 FUB N/A N/A N/A 38552612
    898421 8wa2:G (3.0) BS08 GZL N/A N/A N/A 38552612
    898422 8wa2:G (3.0) BS09 GZL N/A N/A N/A 38552612
    898423 8wa2:G (3.0) BS10 FUB N/A N/A N/A 38552612
    898424 8wa2:G (3.0) BS11 GZL N/A N/A N/A 38552612
    898425 8wa2:G (3.0) BS12 GZL N/A N/A N/A 38552612
    898426 8wa2:G (3.0) BS13 FUB N/A N/A N/A 38552612
    898427 8wa2:G (3.0) BS14 GZL N/A N/A N/A 38552612
    898428 8wa2:G (3.0) BS15 FUB N/A N/A N/A 38552612
    898429 8wa2:G (3.0) BS16 GZL N/A N/A N/A 38552612
    898430 8wa2:G (3.0) BS17 FUB N/A N/A N/A 38552612
    898431 8wa2:H (3.0) BS01 GZL N/A N/A N/A 38552612
    898432 8wa2:H (3.0) BS02 FUB N/A N/A N/A 38552612
    898433 8wa2:H (3.0) BS03 GZL N/A N/A N/A 38552612
    898434 8wa2:H (3.0) BS04 FUB N/A N/A N/A 38552612
    898435 8wa2:H (3.0) BS05 GZL N/A N/A N/A 38552612
    898436 8wa2:H (3.0) BS06 GZL N/A N/A N/A 38552612
    898437 8wa2:H (3.0) BS07 GZL N/A N/A N/A 38552612
    898438 8wa2:I (3.0) BS01 GZL N/A N/A N/A 38552612
    898439 8wa2:I (3.0) BS02 FUB N/A N/A N/A 38552612
    898440 8wa2:I (3.0) BS03 GZL N/A N/A N/A 38552612
    898441 8wa2:I (3.0) BS04 GZL N/A N/A N/A 38552612
    898442 8wa5:A (2.51) BS01 ALF 7.2.2.19 GO:0000166 ... P19156 38072058
    898443 8wa5:A (2.51) BS02 MG 7.2.2.19 GO:0000166 ... P19156 38072058
    898444 8wa5:A (2.51) BS03 CLR 7.2.2.19 GO:0000166 ... P19156 38072058
    898445 8wa7:A (1.63) BS01 THD 2.2.1.1 GO:0000287 ... P27302 N/A
    898446 8wa7:A (1.63) BS02 MG 2.2.1.1 GO:0000287 ... P27302 N/A
    898447 8wa7:A (1.63) BS03 THD 2.2.1.1 GO:0000287 ... P27302 N/A
    898448 8wa7:B (1.63) BS01 THD 2.2.1.1 GO:0000287 ... P27302 N/A
    898449 8wa7:B (1.63) BS02 THD 2.2.1.1 GO:0000287 ... P27302 N/A
    898450 8wa7:B (1.63) BS03 MG 2.2.1.1 GO:0000287 ... P27302 N/A
    898451 8wa8:A (1.48) BS01 CA 2.2.1.1 GO:0000287 ... P29401 N/A
    898452 8wa8:A (1.48) BS02 TPP 2.2.1.1 GO:0000287 ... P29401 N/A
    898453 8wa9:A (1.5) BS01 CA 2.2.1.1 GO:0000287 ... P29401 N/A
    898454 8wa9:A (1.5) BS02 THD 2.2.1.1 GO:0000287 ... P29401 N/A
    898455 8wa9:A (1.5) BS03 THD 2.2.1.1 GO:0000287 ... P29401 N/A
    898456 8wa9:B (1.5) BS01 THD 2.2.1.1 GO:0000287 ... P29401 N/A
    898457 8wa9:B (1.5) BS02 CA 2.2.1.1 GO:0000287 ... P29401 N/A
    898458 8wa9:B (1.5) BS03 THD 2.2.1.1 GO:0000287 ... P29401 N/A
    898459 8waa:A (1.5) BS01 CA 2.2.1.1 GO:0000287 ... P29401 N/A
    898460 8waa:A (1.5) BS02 3GR 2.2.1.1 GO:0000287 ... P29401 N/A
    898461 8waa:A (1.5) BS03 THD 2.2.1.1 GO:0000287 ... P29401 N/A
    898462 8waa:A (1.5) BS04 THD 2.2.1.1 GO:0000287 ... P29401 N/A
    898463 8waa:B (1.5) BS01 THD 2.2.1.1 GO:0000287 ... P29401 N/A
    898464 8waa:B (1.5) BS02 CA 2.2.1.1 GO:0000287 ... P29401 N/A
    898465 8waa:B (1.5) BS03 3GR 2.2.1.1 GO:0000287 ... P29401 N/A
    898466 8waa:B (1.5) BS04 THD 2.2.1.1 GO:0000287 ... P29401 N/A
    898467 8wai:A (1.45) BS01 ZN N/A N/A A0A1D1V463 39417615
    898468 8wai:A (1.45) BS02 ZN N/A N/A A0A1D1V463 39417615
    898469 8wai:B (1.45) BS01 ZN N/A N/A A0A1D1V463 39417615
    898470 8wai:B (1.45) BS02 ZN N/A N/A A0A1D1V463 39417615
    898471 8wak:0 (5.47) BS01 ZN ? GO:0000082 ... P51948 38127763
    898472 8wak:2 (5.47) BS01 ZN ? GO:0000438 ... Q13888 38127763
    898473 8wak:2 (5.47) BS02 ZN ? GO:0000438 ... Q13888 38127763
    898474 8wak:2 (5.47) BS03 ZN ? GO:0000438 ... Q13888 38127763
    898475 8wak:3 (5.47) BS01 ZN ? GO:0000438 ... Q13889 38127763
    898476 8wak:3 (5.47) BS02 ZN ? GO:0000438 ... Q13889 38127763
    898477 8wak:6 (5.47) BS01 dna 5.6.2.4 GO:0000112 ... P19447 38127763
    898478 8wak:6 (5.47) BS02 dna 5.6.2.4 GO:0000112 ... P19447 38127763
    898479 8wak:7 (5.47) BS01 SF4 3.6.4.12 GO:0000439 ... P18074 38127763
    898480 8wak:P (5.47) BS01 dna ? GO:0000785 ... P20226 38127763
    898481 8wak:P (5.47) BS02 dna ? GO:0000785 ... P20226 38127763
    898482 8wak:Q (5.47) BS01 dna ? GO:0000979 ... P52655 38127763
    898483 8wak:R (5.47) BS01 dna 2.3.1.48 GO:0000776 ... Q00403 38127763
    898484 8wak:R (5.47) BS02 dna 2.3.1.48 GO:0000776 ... Q00403 38127763
    898485 8wak:R (5.47) BS03 ZN 2.3.1.48 GO:0000776 ... Q00403 38127763
    898486 8wak:T (5.47) BS01 dna 3.6.4.12 GO:0003677 ... P13984 38127763
    898487 8wak:U (5.47) BS01 ZN ? GO:0005515 ... P29083 38127763
    898488 8wak:o (5.47) BS01 peptide 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898489 8wak:o (5.47) BS02 rna 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898490 8wak:o (5.47) BS03 dna 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898491 8wak:o (5.47) BS04 dna 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898492 8wak:o (5.47) BS05 ZN 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898493 8wak:o (5.47) BS06 ZN 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898494 8wak:o (5.47) BS07 MG 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898495 8wak:p (5.47) BS01 rna 2.7.7.6 GO:0000428 ... A0A4X1TVZ5 38127763
    898496 8wak:p (5.47) BS02 dna 2.7.7.6 GO:0000428 ... A0A4X1TVZ5 38127763
    898497 8wak:p (5.47) BS03 W0F 2.7.7.6 GO:0000428 ... A0A4X1TVZ5 38127763
    898498 8wak:p (5.47) BS04 ZN 2.7.7.6 GO:0000428 ... A0A4X1TVZ5 38127763
    898499 8wak:q (5.47) BS01 ZN ? GO:0000428 ... I3LCH3 38127763
    898500 8wak:s (5.47) BS01 dna ? GO:0003677 ... A0A4X1VTX4 38127763
    898501 8wak:w (5.47) BS01 ZN ? GO:0000428 ... P60899 38127763
    898502 8wak:w (5.47) BS02 ZN ? GO:0000428 ... P60899 38127763
    898503 8wak:x (5.47) BS01 ZN ? GO:0000428 ... A0A493TD97 38127763
    898504 8wak:z (5.47) BS01 ZN ? GO:0001054 ... A0A4X1TRS6 38127763
    898505 8wal:0 (8.52) BS01 ZN ? GO:0000082 ... P51948 38127763
    898506 8wal:2 (8.52) BS01 ZN ? GO:0000438 ... Q13888 38127763
    898507 8wal:2 (8.52) BS02 ZN ? GO:0000438 ... Q13888 38127763
    898508 8wal:2 (8.52) BS03 ZN ? GO:0000438 ... Q13888 38127763
    898509 8wal:3 (8.52) BS01 ZN ? GO:0000438 ... Q13889 38127763
    898510 8wal:3 (8.52) BS02 ZN ? GO:0000438 ... Q13889 38127763
    898511 8wal:6 (8.52) BS01 dna 5.6.2.4 GO:0000112 ... P19447 38127763
    898512 8wal:6 (8.52) BS02 dna 5.6.2.4 GO:0000112 ... P19447 38127763
    898513 8wal:7 (8.52) BS01 SF4 3.6.4.12 GO:0000439 ... P18074 38127763
    898514 8wal:P (8.52) BS01 dna ? GO:0000785 ... P20226 38127763
    898515 8wal:P (8.52) BS02 dna ? GO:0000785 ... P20226 38127763
    898516 8wal:Q (8.52) BS01 dna ? GO:0000979 ... P52655 38127763
    898517 8wal:R (8.52) BS01 dna 2.3.1.48 GO:0000776 ... Q00403 38127763
    898518 8wal:R (8.52) BS02 dna 2.3.1.48 GO:0000776 ... Q00403 38127763
    898519 8wal:R (8.52) BS03 ZN 2.3.1.48 GO:0000776 ... Q00403 38127763
    898520 8wal:T (8.52) BS01 dna 3.6.4.12 GO:0003677 ... P13984 38127763
    898521 8wal:U (8.52) BS01 ZN ? GO:0005515 ... P29083 38127763
    898522 8wal:o (8.52) BS01 peptide 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898523 8wal:o (8.52) BS02 dna 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898524 8wal:o (8.52) BS03 dna 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898525 8wal:o (8.52) BS04 ZN 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898526 8wal:o (8.52) BS05 ZN 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898527 8wal:o (8.52) BS06 MG 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898528 8wal:p (8.52) BS01 rna 2.7.7.6 GO:0000428 ... A0A4X1TVZ5 38127763
    898529 8wal:p (8.52) BS02 dna 2.7.7.6 GO:0000428 ... A0A4X1TVZ5 38127763
    898530 8wal:p (8.52) BS03 W0F 2.7.7.6 GO:0000428 ... A0A4X1TVZ5 38127763
    898531 8wal:p (8.52) BS04 ZN 2.7.7.6 GO:0000428 ... A0A4X1TVZ5 38127763
    898532 8wal:q (8.52) BS01 ZN ? GO:0000428 ... I3LCH3 38127763
    898533 8wal:s (8.52) BS01 dna ? GO:0003677 ... A0A4X1VTX4 38127763
    898534 8wal:w (8.52) BS01 ZN ? GO:0000428 ... P60899 38127763
    898535 8wal:w (8.52) BS02 ZN ? GO:0000428 ... P60899 38127763
    898536 8wal:x (8.52) BS01 ZN ? GO:0000428 ... A0A493TD97 38127763
    898537 8wal:z (8.52) BS01 ZN ? GO:0001054 ... A0A4X1TRS6 38127763
    898538 8wam:A (3.23) BS01 ATP ? GO:0005524 ... Q84TH5 38050355
    898539 8wam:A (3.23) BS02 MG ? GO:0005524 ... Q84TH5 38050355
    898540 8wam:A (3.23) BS03 ATP ? GO:0005524 ... Q84TH5 38050355
    898541 8wam:B (3.23) BS01 ATP ? GO:0005524 ... Q84TH5 38050355
    898542 8wam:B (3.23) BS02 ATP ? GO:0005524 ... Q84TH5 38050355
    898543 8wam:B (3.23) BS03 MG ? GO:0005524 ... Q84TH5 38050355
    898544 8wan:0 (6.07) BS01 ZN ? GO:0000082 ... P51948 38127763
    898545 8wan:2 (6.07) BS01 ZN ? GO:0000438 ... Q13888 38127763
    898546 8wan:2 (6.07) BS02 ZN ? GO:0000438 ... Q13888 38127763
    898547 8wan:2 (6.07) BS03 ZN ? GO:0000438 ... Q13888 38127763
    898548 8wan:3 (6.07) BS01 ZN ? GO:0000438 ... Q13889 38127763
    898549 8wan:3 (6.07) BS02 ZN ? GO:0000438 ... Q13889 38127763
    898550 8wan:6 (6.07) BS01 dna 5.6.2.4 GO:0000112 ... P19447 38127763
    898551 8wan:6 (6.07) BS02 dna 5.6.2.4 GO:0000112 ... P19447 38127763
    898552 8wan:7 (6.07) BS01 SF4 3.6.4.12 GO:0000439 ... P18074 38127763
    898553 8wan:P (6.07) BS01 dna ? GO:0000785 ... P20226 38127763
    898554 8wan:P (6.07) BS02 dna ? GO:0000785 ... P20226 38127763
    898555 8wan:Q (6.07) BS01 dna ? GO:0000979 ... P52655 38127763
    898556 8wan:R (6.07) BS01 dna 2.3.1.48 GO:0000776 ... Q00403 38127763
    898557 8wan:R (6.07) BS02 dna 2.3.1.48 GO:0000776 ... Q00403 38127763
    898558 8wan:R (6.07) BS03 ZN 2.3.1.48 GO:0000776 ... Q00403 38127763
    898559 8wan:T (6.07) BS01 dna 3.6.4.12 GO:0003677 ... P13984 38127763
    898560 8wan:U (6.07) BS01 ZN ? GO:0005515 ... P29083 38127763
    898561 8wan:o (6.07) BS01 peptide 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898562 8wan:o (6.07) BS02 dna 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898563 8wan:o (6.07) BS03 dna 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898564 8wan:o (6.07) BS04 ZN 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898565 8wan:o (6.07) BS05 ZN 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898566 8wan:o (6.07) BS06 MG 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898567 8wan:p (6.07) BS01 rna 2.7.7.6 GO:0000428 ... A0A4X1TVZ5 38127763
    898568 8wan:p (6.07) BS02 dna 2.7.7.6 GO:0000428 ... A0A4X1TVZ5 38127763
    898569 8wan:p (6.07) BS03 W0F 2.7.7.6 GO:0000428 ... A0A4X1TVZ5 38127763
    898570 8wan:p (6.07) BS04 ZN 2.7.7.6 GO:0000428 ... A0A4X1TVZ5 38127763
    898571 8wan:q (6.07) BS01 ZN ? GO:0000428 ... I3LCH3 38127763
    898572 8wan:s (6.07) BS01 dna ? GO:0003677 ... A0A4X1VTX4 38127763
    898573 8wan:w (6.07) BS01 ZN ? GO:0000428 ... P60899 38127763
    898574 8wan:w (6.07) BS02 ZN ? GO:0000428 ... P60899 38127763
    898575 8wan:x (6.07) BS01 ZN ? GO:0000428 ... A0A493TD97 38127763
    898576 8wan:z (6.07) BS01 ZN ? GO:0001054 ... A0A4X1TRS6 38127763
    898577 8wao:0 (6.4) BS01 ZN ? GO:0000082 ... P51948 38127763
    898578 8wao:2 (6.4) BS01 ZN ? GO:0000438 ... Q13888 38127763
    898579 8wao:2 (6.4) BS02 ZN ? GO:0000438 ... Q13888 38127763
    898580 8wao:2 (6.4) BS03 ZN ? GO:0000438 ... Q13888 38127763
    898581 8wao:3 (6.4) BS01 ZN ? GO:0000438 ... Q13889 38127763
    898582 8wao:3 (6.4) BS02 ZN ? GO:0000438 ... Q13889 38127763
    898583 8wao:6 (6.4) BS01 dna 5.6.2.4 GO:0000112 ... P19447 38127763
    898584 8wao:6 (6.4) BS02 dna 5.6.2.4 GO:0000112 ... P19447 38127763
    898585 8wao:7 (6.4) BS01 SF4 3.6.4.12 GO:0000439 ... P18074 38127763
    898586 8wao:P (6.4) BS01 dna ? GO:0000785 ... P20226 38127763
    898587 8wao:P (6.4) BS02 dna ? GO:0000785 ... P20226 38127763
    898588 8wao:Q (6.4) BS01 dna ? GO:0000979 ... P52655 38127763
    898589 8wao:R (6.4) BS01 dna 2.3.1.48 GO:0000776 ... Q00403 38127763
    898590 8wao:R (6.4) BS02 dna 2.3.1.48 GO:0000776 ... Q00403 38127763
    898591 8wao:R (6.4) BS03 ZN 2.3.1.48 GO:0000776 ... Q00403 38127763
    898592 8wao:T (6.4) BS01 dna 3.6.4.12 GO:0003677 ... P13984 38127763
    898593 8wao:U (6.4) BS01 ZN ? GO:0005515 ... P29083 38127763
    898594 8wao:o (6.4) BS01 peptide 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898595 8wao:o (6.4) BS02 rna 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898596 8wao:o (6.4) BS03 dna 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898597 8wao:o (6.4) BS04 dna 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898598 8wao:o (6.4) BS05 ZN 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898599 8wao:o (6.4) BS06 ZN 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898600 8wao:o (6.4) BS07 MG 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).