SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 4484 4485 4486 4487 4488 4489 4490 4491 4492 4493 4494 4495 4496 4497 4498 4499 4500 4501 4502 4503 4504 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    898601 8wao:p (6.4) BS01 rna 2.7.7.6 GO:0000428 ... A0A4X1TVZ5 38127763
    898602 8wao:p (6.4) BS02 dna 2.7.7.6 GO:0000428 ... A0A4X1TVZ5 38127763
    898603 8wao:p (6.4) BS03 W0F 2.7.7.6 GO:0000428 ... A0A4X1TVZ5 38127763
    898604 8wao:p (6.4) BS04 ZN 2.7.7.6 GO:0000428 ... A0A4X1TVZ5 38127763
    898605 8wao:q (6.4) BS01 ZN ? GO:0000428 ... I3LCH3 38127763
    898606 8wao:s (6.4) BS01 dna ? GO:0003677 ... A0A4X1VTX4 38127763
    898607 8wao:w (6.4) BS01 ZN ? GO:0000428 ... P60899 38127763
    898608 8wao:w (6.4) BS02 ZN ? GO:0000428 ... P60899 38127763
    898609 8wao:x (6.4) BS01 ZN ? GO:0000428 ... A0A493TD97 38127763
    898610 8wao:z (6.4) BS01 ZN ? GO:0001054 ... A0A4X1TRS6 38127763
    898611 8wap:0 (5.85) BS01 ZN ? GO:0000082 ... P51948 38127763
    898612 8wap:2 (5.85) BS01 ZN ? GO:0000438 ... Q13888 38127763
    898613 8wap:2 (5.85) BS02 ZN ? GO:0000438 ... Q13888 38127763
    898614 8wap:2 (5.85) BS03 ZN ? GO:0000438 ... Q13888 38127763
    898615 8wap:3 (5.85) BS01 ZN ? GO:0000438 ... Q13889 38127763
    898616 8wap:3 (5.85) BS02 ZN ? GO:0000438 ... Q13889 38127763
    898617 8wap:6 (5.85) BS01 dna 5.6.2.4 GO:0000112 ... P19447 38127763
    898618 8wap:6 (5.85) BS02 dna 5.6.2.4 GO:0000112 ... P19447 38127763
    898619 8wap:7 (5.85) BS01 SF4 3.6.4.12 GO:0000439 ... P18074 38127763
    898620 8wap:P (5.85) BS01 dna ? GO:0000785 ... P20226 38127763
    898621 8wap:P (5.85) BS02 dna ? GO:0000785 ... P20226 38127763
    898622 8wap:Q (5.85) BS01 dna ? GO:0000979 ... P52655 38127763
    898623 8wap:R (5.85) BS01 dna 2.3.1.48 GO:0000776 ... Q00403 38127763
    898624 8wap:R (5.85) BS02 dna 2.3.1.48 GO:0000776 ... Q00403 38127763
    898625 8wap:R (5.85) BS03 ZN 2.3.1.48 GO:0000776 ... Q00403 38127763
    898626 8wap:T (5.85) BS01 dna 3.6.4.12 GO:0003677 ... P13984 38127763
    898627 8wap:U (5.85) BS01 ZN ? GO:0005515 ... P29083 38127763
    898628 8wap:o (5.85) BS01 peptide 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898629 8wap:o (5.85) BS02 rna 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898630 8wap:o (5.85) BS03 dna 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898631 8wap:o (5.85) BS04 dna 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898632 8wap:o (5.85) BS05 ZN 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898633 8wap:o (5.85) BS06 ZN 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898634 8wap:o (5.85) BS07 MG 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898635 8wap:p (5.85) BS01 rna 2.7.7.6 GO:0000428 ... A0A4X1TVZ5 38127763
    898636 8wap:p (5.85) BS02 dna 2.7.7.6 GO:0000428 ... A0A4X1TVZ5 38127763
    898637 8wap:p (5.85) BS03 W0F 2.7.7.6 GO:0000428 ... A0A4X1TVZ5 38127763
    898638 8wap:p (5.85) BS04 ZN 2.7.7.6 GO:0000428 ... A0A4X1TVZ5 38127763
    898639 8wap:q (5.85) BS01 ZN ? GO:0000428 ... I3LCH3 38127763
    898640 8wap:s (5.85) BS01 dna ? GO:0003677 ... A0A4X1VTX4 38127763
    898641 8wap:w (5.85) BS01 ZN ? GO:0000428 ... P60899 38127763
    898642 8wap:w (5.85) BS02 ZN ? GO:0000428 ... P60899 38127763
    898643 8wap:x (5.85) BS01 ZN ? GO:0000428 ... A0A493TD97 38127763
    898644 8wap:z (5.85) BS01 ZN ? GO:0001054 ... A0A4X1TRS6 38127763
    898645 8waq:0 (6.29) BS01 ZN ? GO:0000082 ... P51948 38127763
    898646 8waq:2 (6.29) BS01 ZN ? GO:0000438 ... Q13888 38127763
    898647 8waq:2 (6.29) BS02 ZN ? GO:0000438 ... Q13888 38127763
    898648 8waq:2 (6.29) BS03 ZN ? GO:0000438 ... Q13888 38127763
    898649 8waq:3 (6.29) BS01 ZN ? GO:0000438 ... Q13889 38127763
    898650 8waq:3 (6.29) BS02 ZN ? GO:0000438 ... Q13889 38127763
    898651 8waq:6 (6.29) BS01 dna 5.6.2.4 GO:0000112 ... P19447 38127763
    898652 8waq:6 (6.29) BS02 dna 5.6.2.4 GO:0000112 ... P19447 38127763
    898653 8waq:7 (6.29) BS01 SF4 3.6.4.12 GO:0000439 ... P18074 38127763
    898654 8waq:P (6.29) BS01 dna ? GO:0000785 ... P20226 38127763
    898655 8waq:P (6.29) BS02 dna ? GO:0000785 ... P20226 38127763
    898656 8waq:Q (6.29) BS01 dna ? GO:0000979 ... P52655 38127763
    898657 8waq:R (6.29) BS01 dna 2.3.1.48 GO:0000776 ... Q00403 38127763
    898658 8waq:R (6.29) BS02 dna 2.3.1.48 GO:0000776 ... Q00403 38127763
    898659 8waq:R (6.29) BS03 ZN 2.3.1.48 GO:0000776 ... Q00403 38127763
    898660 8waq:T (6.29) BS01 dna 3.6.4.12 GO:0003677 ... P13984 38127763
    898661 8waq:U (6.29) BS01 ZN ? GO:0005515 ... P29083 38127763
    898662 8waq:o (6.29) BS01 peptide 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898663 8waq:o (6.29) BS02 rna 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898664 8waq:o (6.29) BS03 dna 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898665 8waq:o (6.29) BS04 dna 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898666 8waq:o (6.29) BS05 ZN 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898667 8waq:o (6.29) BS06 ZN 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898668 8waq:o (6.29) BS07 MG 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898669 8waq:p (6.29) BS01 rna 2.7.7.6 GO:0000428 ... A0A4X1TVZ5 38127763
    898670 8waq:p (6.29) BS02 dna 2.7.7.6 GO:0000428 ... A0A4X1TVZ5 38127763
    898671 8waq:p (6.29) BS03 W0F 2.7.7.6 GO:0000428 ... A0A4X1TVZ5 38127763
    898672 8waq:p (6.29) BS04 ZN 2.7.7.6 GO:0000428 ... A0A4X1TVZ5 38127763
    898673 8waq:q (6.29) BS01 ZN ? GO:0000428 ... I3LCH3 38127763
    898674 8waq:s (6.29) BS01 dna ? GO:0003677 ... A0A4X1VTX4 38127763
    898675 8waq:w (6.29) BS01 ZN ? GO:0000428 ... P60899 38127763
    898676 8waq:w (6.29) BS02 ZN ? GO:0000428 ... P60899 38127763
    898677 8waq:x (6.29) BS01 ZN ? GO:0000428 ... A0A493TD97 38127763
    898678 8waq:z (6.29) BS01 ZN ? GO:0001054 ... A0A4X1TRS6 38127763
    898679 8war:0 (7.2) BS01 ZN ? GO:0000082 ... P51948 38127763
    898680 8war:2 (7.2) BS01 ZN ? GO:0000438 ... Q13888 38127763
    898681 8war:2 (7.2) BS02 ZN ? GO:0000438 ... Q13888 38127763
    898682 8war:2 (7.2) BS03 ZN ? GO:0000438 ... Q13888 38127763
    898683 8war:3 (7.2) BS01 ZN ? GO:0000438 ... Q13889 38127763
    898684 8war:3 (7.2) BS02 ZN ? GO:0000438 ... Q13889 38127763
    898685 8war:6 (7.2) BS01 dna 5.6.2.4 GO:0000112 ... P19447 38127763
    898686 8war:6 (7.2) BS02 dna 5.6.2.4 GO:0000112 ... P19447 38127763
    898687 8war:7 (7.2) BS01 SF4 3.6.4.12 GO:0000439 ... P18074 38127763
    898688 8war:P (7.2) BS01 dna ? GO:0000785 ... P20226 38127763
    898689 8war:P (7.2) BS02 dna ? GO:0000785 ... P20226 38127763
    898690 8war:Q (7.2) BS01 dna ? GO:0000979 ... P52655 38127763
    898691 8war:R (7.2) BS01 dna 2.3.1.48 GO:0000776 ... Q00403 38127763
    898692 8war:R (7.2) BS02 dna 2.3.1.48 GO:0000776 ... Q00403 38127763
    898693 8war:R (7.2) BS03 ZN 2.3.1.48 GO:0000776 ... Q00403 38127763
    898694 8war:T (7.2) BS01 dna 3.6.4.12 GO:0003677 ... P13984 38127763
    898695 8war:U (7.2) BS01 ZN ? GO:0005515 ... P29083 38127763
    898696 8war:o (7.2) BS01 peptide 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898697 8war:o (7.2) BS02 rna 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898698 8war:o (7.2) BS03 dna 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898699 8war:o (7.2) BS04 dna 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898700 8war:o (7.2) BS05 ZN 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898701 8war:o (7.2) BS06 ZN 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898702 8war:o (7.2) BS07 MG 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898703 8war:p (7.2) BS01 rna 2.7.7.6 GO:0000428 ... A0A4X1TVZ5 38127763
    898704 8war:p (7.2) BS02 dna 2.7.7.6 GO:0000428 ... A0A4X1TVZ5 38127763
    898705 8war:p (7.2) BS03 W0F 2.7.7.6 GO:0000428 ... A0A4X1TVZ5 38127763
    898706 8war:p (7.2) BS04 ZN 2.7.7.6 GO:0000428 ... A0A4X1TVZ5 38127763
    898707 8war:q (7.2) BS01 ZN ? GO:0000428 ... I3LCH3 38127763
    898708 8war:s (7.2) BS01 dna ? GO:0003677 ... A0A4X1VTX4 38127763
    898709 8war:w (7.2) BS01 ZN ? GO:0000428 ... P60899 38127763
    898710 8war:w (7.2) BS02 ZN ? GO:0000428 ... P60899 38127763
    898711 8war:x (7.2) BS01 ZN ? GO:0000428 ... A0A493TD97 38127763
    898712 8war:z (7.2) BS01 ZN ? GO:0001054 ... A0A4X1TRS6 38127763
    898713 8was:0 (6.13) BS01 ZN ? GO:0000082 ... P51948 38127763
    898714 8was:2 (6.13) BS01 ZN ? GO:0000438 ... Q13888 38127763
    898715 8was:2 (6.13) BS02 ZN ? GO:0000438 ... Q13888 38127763
    898716 8was:2 (6.13) BS03 ZN ? GO:0000438 ... Q13888 38127763
    898717 8was:3 (6.13) BS01 ZN ? GO:0000438 ... Q13889 38127763
    898718 8was:3 (6.13) BS02 ZN ? GO:0000438 ... Q13889 38127763
    898719 8was:6 (6.13) BS01 dna 5.6.2.4 GO:0000112 ... P19447 38127763
    898720 8was:6 (6.13) BS02 dna 5.6.2.4 GO:0000112 ... P19447 38127763
    898721 8was:7 (6.13) BS01 SF4 3.6.4.12 GO:0000439 ... P18074 38127763
    898722 8was:P (6.13) BS01 dna ? GO:0000785 ... P20226 38127763
    898723 8was:P (6.13) BS02 dna ? GO:0000785 ... P20226 38127763
    898724 8was:Q (6.13) BS01 dna ? GO:0000979 ... P52655 38127763
    898725 8was:R (6.13) BS01 dna 2.3.1.48 GO:0000776 ... Q00403 38127763
    898726 8was:R (6.13) BS02 dna 2.3.1.48 GO:0000776 ... Q00403 38127763
    898727 8was:R (6.13) BS03 ZN 2.3.1.48 GO:0000776 ... Q00403 38127763
    898728 8was:T (6.13) BS01 dna 3.6.4.12 GO:0003677 ... P13984 38127763
    898729 8was:U (6.13) BS01 ZN ? GO:0005515 ... P29083 38127763
    898730 8was:o (6.13) BS01 peptide 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898731 8was:o (6.13) BS02 rna 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898732 8was:o (6.13) BS03 dna 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898733 8was:o (6.13) BS04 dna 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898734 8was:o (6.13) BS05 ZN 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898735 8was:o (6.13) BS06 ZN 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898736 8was:o (6.13) BS07 MG 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898737 8was:p (6.13) BS01 rna 2.7.7.6 GO:0000428 ... A0A4X1TVZ5 38127763
    898738 8was:p (6.13) BS02 dna 2.7.7.6 GO:0000428 ... A0A4X1TVZ5 38127763
    898739 8was:p (6.13) BS03 W0F 2.7.7.6 GO:0000428 ... A0A4X1TVZ5 38127763
    898740 8was:p (6.13) BS04 ZN 2.7.7.6 GO:0000428 ... A0A4X1TVZ5 38127763
    898741 8was:q (6.13) BS01 ZN ? GO:0000428 ... I3LCH3 38127763
    898742 8was:s (6.13) BS01 dna ? GO:0003677 ... A0A4X1VTX4 38127763
    898743 8was:w (6.13) BS01 ZN ? GO:0000428 ... P60899 38127763
    898744 8was:w (6.13) BS02 ZN ? GO:0000428 ... P60899 38127763
    898745 8was:x (6.13) BS01 ZN ? GO:0000428 ... A0A493TD97 38127763
    898746 8was:z (6.13) BS01 ZN ? GO:0001054 ... A0A4X1TRS6 38127763
    898747 8wat:o (2.82) BS01 peptide 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898748 8wat:o (2.82) BS02 dna 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898749 8wat:o (2.82) BS03 rna 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898750 8wat:o (2.82) BS04 ZN 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898751 8wat:o (2.82) BS05 ZN 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898752 8wat:o (2.82) BS06 MG 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898753 8wat:o (2.82) BS07 W0F 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898754 8wat:p (2.82) BS01 dna 2.7.7.6 GO:0000428 ... I3LGP4 38127763
    898755 8wat:p (2.82) BS02 rna 2.7.7.6 GO:0000428 ... I3LGP4 38127763
    898756 8wat:p (2.82) BS03 W0F 2.7.7.6 GO:0000428 ... I3LGP4 38127763
    898757 8wat:p (2.82) BS04 ZN 2.7.7.6 GO:0000428 ... I3LGP4 38127763
    898758 8wat:q (2.82) BS01 ZN ? GO:0000428 ... I3LCH3 38127763
    898759 8wat:s (2.82) BS01 dna ? GO:0001054 ... I3LSI7 38127763
    898760 8wat:w (2.82) BS01 ZN ? GO:0000428 ... P60899 38127763
    898761 8wat:w (2.82) BS02 ZN ? GO:0000428 ... P60899 38127763
    898762 8wat:x (2.82) BS01 ZN ? GO:0000428 ... A0A8W4F9W9 38127763
    898763 8wat:z (2.82) BS01 ZN ? GO:0001054 ... A0A4X1TRS6 38127763
    898764 8wau:o (2.78) BS01 peptide 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898765 8wau:o (2.78) BS02 dna 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898766 8wau:o (2.78) BS03 rna 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898767 8wau:o (2.78) BS04 W0F 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898768 8wau:o (2.78) BS05 ZN 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898769 8wau:o (2.78) BS06 ZN 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898770 8wau:o (2.78) BS07 MG 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898771 8wau:p (2.78) BS01 dna 2.7.7.6 GO:0000428 ... I3LGP4 38127763
    898772 8wau:p (2.78) BS02 rna 2.7.7.6 GO:0000428 ... I3LGP4 38127763
    898773 8wau:p (2.78) BS03 W0F 2.7.7.6 GO:0000428 ... I3LGP4 38127763
    898774 8wau:p (2.78) BS04 ZN 2.7.7.6 GO:0000428 ... I3LGP4 38127763
    898775 8wau:q (2.78) BS01 ZN ? GO:0000428 ... I3LCH3 38127763
    898776 8wau:s (2.78) BS01 dna ? GO:0001054 ... I3LSI7 38127763
    898777 8wau:w (2.78) BS01 ZN ? GO:0000428 ... P60899 38127763
    898778 8wau:w (2.78) BS02 ZN ? GO:0000428 ... P60899 38127763
    898779 8wau:x (2.78) BS01 ZN ? GO:0000428 ... A0A8W4F9W9 38127763
    898780 8wau:z (2.78) BS01 ZN ? GO:0001054 ... A0A8D0JYF1 38127763
    898781 8wav:o (2.72) BS01 peptide 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898782 8wav:o (2.72) BS02 dna 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898783 8wav:o (2.72) BS03 dna 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898784 8wav:o (2.72) BS04 rna 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898785 8wav:o (2.72) BS05 ZN 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898786 8wav:o (2.72) BS06 ZN 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898787 8wav:o (2.72) BS07 MG 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898788 8wav:o (2.72) BS08 W0F 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898789 8wav:p (2.72) BS01 dna 2.7.7.6 GO:0000428 ... I3LGP4 38127763
    898790 8wav:p (2.72) BS02 rna 2.7.7.6 GO:0000428 ... I3LGP4 38127763
    898791 8wav:p (2.72) BS03 W0F 2.7.7.6 GO:0000428 ... I3LGP4 38127763
    898792 8wav:p (2.72) BS04 ZN 2.7.7.6 GO:0000428 ... I3LGP4 38127763
    898793 8wav:q (2.72) BS01 ZN ? GO:0000428 ... I3LCH3 38127763
    898794 8wav:s (2.72) BS01 dna ? GO:0001054 ... I3LSI7 38127763
    898795 8wav:w (2.72) BS01 ZN ? GO:0000428 ... P60899 38127763
    898796 8wav:w (2.72) BS02 ZN ? GO:0000428 ... P60899 38127763
    898797 8wav:x (2.72) BS01 ZN ? GO:0000428 ... A0A8W4F9W9 38127763
    898798 8wav:z (2.72) BS01 ZN ? GO:0001054 ... A0A8D0JYF1 38127763
    898799 8waw:o (3.02) BS01 peptide 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898800 8waw:o (3.02) BS02 dna 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).