SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    898801 8v90:B (2.08) BS04 MG N/A GO:0000976 ... Q9AIU0 39562775
    898802 8v90:C (2.08) BS01 YOE N/A GO:0000976 ... Q9AIU0 39562775
    898803 8v90:C (2.08) BS02 MG N/A GO:0000976 ... Q9AIU0 39562775
    898804 8v90:D (2.08) BS01 YOE N/A GO:0000976 ... Q9AIU0 39562775
    898805 8v90:D (2.08) BS02 YOE N/A GO:0000976 ... Q9AIU0 39562775
    898806 8v90:D (2.08) BS03 MG N/A GO:0000976 ... Q9AIU0 39562775
    898807 8v92:A (1.27) BS01 A1AAL N/A N/A O60885 40120495
    898808 8v9b:A (1.19) BS01 A1AAM 3.4.21.- N/A P08519 38720069
    898809 8v9b:B (1.19) BS01 A1AAM 3.4.21.- N/A P08519 38720069
    898810 8v9c:A (4.4) BS01 2SQ N/A GO:0003676 ... P12497 40409709
    898811 8v9c:A (4.4) BS02 2SQ N/A GO:0003676 ... P12497 40409709
    898812 8v9c:B (4.4) BS01 2SQ N/A GO:0003676 ... P12497 40409709
    898813 8v9c:B (4.4) BS02 2SQ N/A GO:0003676 ... P12497 40409709
    898814 8v9f:A (1.22) BS01 YPB N/A N/A O60885 40120495
    898815 8v9g:A (1.62) BS01 MER 3.5.2.6 GO:0008800 ... Q09HD0 38511828
    898816 8v9g:A (1.62) BS02 MG 3.5.2.6 GO:0008800 ... Q09HD0 38511828
    898817 8v9g:B (1.62) BS01 MER 3.5.2.6 GO:0008800 ... Q09HD0 38511828
    898818 8v9h:A (1.5) BS01 Y33 3.5.2.6 GO:0008800 ... Q09HD0 38511828
    898819 8v9h:A (1.5) BS02 CA 3.5.2.6 GO:0008800 ... Q09HD0 38511828
    898820 8v9h:B (1.5) BS01 Y33 3.5.2.6 GO:0008800 ... Q09HD0 38511828
    898821 8v9i:A (1.981) BS01 A1AAN 2.2.1.7 GO:0000287 ... Q9RUB5 38513073
    898822 8v9i:A (1.981) BS02 MG 2.2.1.7 GO:0000287 ... Q9RUB5 38513073
    898823 8v9i:A (1.981) BS03 BGQ 2.2.1.7 GO:0000287 ... Q9RUB5 38513073
    898824 8v9i:B (1.981) BS01 A1AAN 2.2.1.7 GO:0000287 ... Q9RUB5 38513073
    898825 8v9i:B (1.981) BS02 MG 2.2.1.7 GO:0000287 ... Q9RUB5 38513073
    898826 8v9j:1 (3.1) BS01 rna ? GO:0003735 ... A0QSD9 38355796
    898827 8v9j:2 (3.1) BS01 rna ? GO:0003735 ... A0QSG7 38355796
    898828 8v9j:2 (3.1) BS02 rna ? GO:0003735 ... A0QSG7 38355796
    898829 8v9j:3 (3.1) BS01 rna ? GO:0003735 ... A0R215 38355796
    898830 8v9j:4 (3.1) BS01 rna ? GO:0003735 ... A0R3I9 38355796
    898831 8v9j:5 (3.1) BS01 rna ? GO:0003735 ... A0QS39 38355796
    898832 8v9j:5 (3.1) BS02 ZN ? GO:0003735 ... A0QS39 38355796
    898833 8v9j:6 (3.1) BS01 rna ? GO:0003735 ... A0R7K0 38355796
    898834 8v9j:7 (3.1) BS01 rna ? GO:0003735 ... A0QYU7 38355796
    898835 8v9j:8 (3.1) BS01 rna ? GO:0003735 ... A0QSL4 38355796
    898836 8v9j:C (3.1) BS01 rna ? GO:0002181 ... A0QSD4 38355796
    898837 8v9j:D (3.1) BS01 rna ? GO:0003735 ... A0QSD1 38355796
    898838 8v9j:E (3.1) BS01 rna ? GO:0003735 ... A0QSD2 38355796
    898839 8v9j:F (3.1) BS01 rna ? GO:0000049 ... A0QSG1 38355796
    898840 8v9j:F (3.1) BS02 rna ? GO:0000049 ... A0QSG1 38355796
    898841 8v9j:G (3.1) BS01 rna ? GO:0002181 ... A0QSG4 38355796
    898842 8v9j:H (3.1) BS01 rna ? GO:0003735 ... A0R7F6 38355796
    898843 8v9j:I (3.1) BS01 rna ? GO:0003735 ... A0QS62 38355796
    898844 8v9j:J (3.1) BS01 rna ? GO:0003735 ... A0QS45 38355796
    898845 8v9j:K (3.1) BS01 rna ? GO:0003723 ... A0QS46 38355796
    898846 8v9j:L (3.1) BS01 rna ? GO:0003729 ... A0QSP8 38355796
    898847 8v9j:M (3.1) BS01 rna ? GO:0003735 ... A0QSF9 38355796
    898848 8v9j:M (3.1) BS02 rna ? GO:0003735 ... A0QSF9 38355796
    898849 8v9j:N (3.1) BS01 rna ? GO:0003735 ... A0QSG8 38355796
    898850 8v9j:O (3.1) BS01 rna ? GO:0003735 ... A0QSD8 38355796
    898851 8v9j:P (3.1) BS01 rna ? GO:0003735 ... A0QSL9 38355796
    898852 8v9j:Q (3.1) BS01 rna ? GO:0003735 ... A0QSG5 38355796
    898853 8v9j:Q (3.1) BS02 rna ? GO:0003735 ... A0QSG5 38355796
    898854 8v9j:R (3.1) BS01 rna ? GO:0003735 ... A0QV42 38355796
    898855 8v9j:R (3.1) BS02 rna ? GO:0003735 ... A0QV42 38355796
    898856 8v9j:S (3.1) BS01 rna ? GO:0000027 ... A0QYU6 38355796
    898857 8v9j:T (3.1) BS01 rna ? GO:0003723 ... A0R151 38355796
    898858 8v9j:U (3.1) BS01 rna ? GO:0003735 ... A0QSD6 38355796
    898859 8v9j:V (3.1) BS01 rna ? GO:0003735 ... A0QSD3 38355796
    898860 8v9j:W (3.1) BS01 rna ? GO:0003723 ... A0QSG0 38355796
    898861 8v9j:X (3.1) BS01 rna ? GO:0003723 ... A0R3D2 38355796
    898862 8v9j:X (3.1) BS02 rna ? GO:0003723 ... A0R3D2 38355796
    898863 8v9j:Y (3.1) BS01 rna ? GO:0003735 ... A0R150 38355796
    898864 8v9j:Z (3.1) BS01 rna ? GO:0003735 ... A0QV03 38355796
    898865 8v9j:c (3.1) BS01 rna ? GO:0003676 ... A0QSD7 38355796
    898866 8v9j:d (3.1) BS01 rna ? GO:0003723 ... A0QSL7 38355796
    898867 8v9j:e (3.1) BS01 rna ? GO:0003723 ... A0QSG6 38355796
    898868 8v9j:f (3.1) BS01 rna ? GO:0003735 ... A0R7F9 38355796
    898869 8v9j:g (3.1) BS01 rna ? GO:0000049 ... A0QS97 38355796
    898870 8v9j:h (3.1) BS01 rna ? GO:0003735 ... A0QSG3 38355796
    898871 8v9j:i (3.1) BS01 rna ? GO:0003723 ... A0QSP9 38355796
    898872 8v9j:j (3.1) BS01 rna ? GO:0000049 ... A0QSD0 38355796
    898873 8v9j:k (3.1) BS01 rna ? GO:0003735 ... A0QSL6 38355796
    898874 8v9j:l (3.1) BS01 rna ? GO:0000049 ... A0QS96 38355796
    898875 8v9j:m (3.1) BS01 rna ? GO:0000049 ... A0QSL5 38355796
    898876 8v9j:n (3.1) BS01 rna ? GO:0003735 ... A0QSG2 38355796
    898877 8v9j:o (3.1) BS01 rna ? GO:0003735 ... A0QVQ3 38355796
    898878 8v9j:o (3.1) BS02 rna ? GO:0003735 ... A0QVQ3 38355796
    898879 8v9j:p (3.1) BS01 rna ? GO:0003735 ... A0QV37 38355796
    898880 8v9j:q (3.1) BS01 rna ? GO:0003735 ... A0QSE0 38355796
    898881 8v9j:r (3.1) BS01 rna ? GO:0003735 ... A0R7F7 38355796
    898882 8v9j:s (3.1) BS01 rna ? GO:0000028 ... A0QSD5 38355796
    898883 8v9j:t (3.1) BS01 rna ? GO:0003723 ... A0R102 38355796
    898884 8v9j:u (3.1) BS01 rna N/A N/A A0QR10 38355796
    898885 8v9j:z (3.1) BS01 rna ? N/A A0QRI6 38355796
    898886 8v9j:z (3.1) BS02 rna ? N/A A0QRI6 38355796
    898887 8v9k:1 (3.1) BS01 rna ? GO:0003735 ... A0QSD9 38355796
    898888 8v9k:2 (3.1) BS01 rna ? GO:0003735 ... A0QSG7 38355796
    898889 8v9k:2 (3.1) BS02 rna ? GO:0003735 ... A0QSG7 38355796
    898890 8v9k:3 (3.1) BS01 rna ? GO:0003735 ... A0R215 38355796
    898891 8v9k:4 (3.1) BS01 rna ? GO:0003735 ... A0R3I9 38355796
    898892 8v9k:5 (3.1) BS01 rna ? GO:0003735 ... A0QS39 38355796
    898893 8v9k:5 (3.1) BS02 ZN ? GO:0003735 ... A0QS39 38355796
    898894 8v9k:6 (3.1) BS01 rna ? GO:0003735 ... A0R7K0 38355796
    898895 8v9k:7 (3.1) BS01 rna ? GO:0003735 ... A0QYU7 38355796
    898896 8v9k:8 (3.1) BS01 rna ? GO:0003735 ... A0QSL4 38355796
    898897 8v9k:C (3.1) BS01 rna ? GO:0002181 ... A0QSD4 38355796
    898898 8v9k:D (3.1) BS01 rna ? GO:0003735 ... A0QSD1 38355796
    898899 8v9k:E (3.1) BS01 rna ? GO:0003735 ... A0QSD2 38355796
    898900 8v9k:F (3.1) BS01 rna ? GO:0000049 ... A0QSG1 38355796
    898901 8v9k:F (3.1) BS02 rna ? GO:0000049 ... A0QSG1 38355796
    898902 8v9k:G (3.1) BS01 rna ? GO:0002181 ... A0QSG4 38355796
    898903 8v9k:H (3.1) BS01 rna ? GO:0003735 ... A0R7F6 38355796
    898904 8v9k:I (3.1) BS01 rna ? GO:0003735 ... A0QS62 38355796
    898905 8v9k:J (3.1) BS01 rna ? GO:0003735 ... A0QS45 38355796
    898906 8v9k:K (3.1) BS01 rna ? GO:0003723 ... A0QS46 38355796
    898907 8v9k:L (3.1) BS01 rna ? GO:0003729 ... A0QSP8 38355796
    898908 8v9k:M (3.1) BS01 rna ? GO:0003735 ... A0QSF9 38355796
    898909 8v9k:M (3.1) BS02 rna ? GO:0003735 ... A0QSF9 38355796
    898910 8v9k:N (3.1) BS01 rna ? GO:0003735 ... A0QSG8 38355796
    898911 8v9k:O (3.1) BS01 rna ? GO:0003735 ... A0QSD8 38355796
    898912 8v9k:P (3.1) BS01 rna ? GO:0003735 ... A0QSL9 38355796
    898913 8v9k:Q (3.1) BS01 rna ? GO:0003735 ... A0QSG5 38355796
    898914 8v9k:Q (3.1) BS02 rna ? GO:0003735 ... A0QSG5 38355796
    898915 8v9k:R (3.1) BS01 rna ? GO:0003735 ... A0QV42 38355796
    898916 8v9k:R (3.1) BS02 rna ? GO:0003735 ... A0QV42 38355796
    898917 8v9k:S (3.1) BS01 rna ? GO:0000027 ... A0QYU6 38355796
    898918 8v9k:T (3.1) BS01 rna ? GO:0003723 ... A0R151 38355796
    898919 8v9k:U (3.1) BS01 rna ? GO:0003735 ... A0QSD6 38355796
    898920 8v9k:V (3.1) BS01 rna ? GO:0003735 ... A0QSD3 38355796
    898921 8v9k:W (3.1) BS01 rna ? GO:0003723 ... A0QSG0 38355796
    898922 8v9k:X (3.1) BS01 rna ? GO:0003723 ... A0R3D2 38355796
    898923 8v9k:X (3.1) BS02 rna ? GO:0003723 ... A0R3D2 38355796
    898924 8v9k:Y (3.1) BS01 rna ? GO:0003735 ... A0R150 38355796
    898925 8v9k:Z (3.1) BS01 rna ? GO:0003735 ... A0QV03 38355796
    898926 8v9k:Z (3.1) BS02 ZN ? GO:0003735 ... A0QV03 38355796
    898927 8v9k:b (3.1) BS01 rna ? GO:0003735 ... A0QVB8 38355796
    898928 8v9k:c (3.1) BS01 rna ? GO:0003676 ... A0QSD7 38355796
    898929 8v9k:d (3.1) BS01 rna ? GO:0003723 ... A0QSL7 38355796
    898930 8v9k:e (3.1) BS01 rna ? GO:0003723 ... A0QSG6 38355796
    898931 8v9k:f (3.1) BS01 rna ? GO:0003735 ... A0R7F9 38355796
    898932 8v9k:f (3.1) BS02 rna ? GO:0003735 ... A0R7F9 38355796
    898933 8v9k:g (3.1) BS01 rna ? GO:0000049 ... A0QS97 38355796
    898934 8v9k:h (3.1) BS01 rna ? GO:0003735 ... A0QSG3 38355796
    898935 8v9k:i (3.1) BS01 rna ? GO:0003723 ... A0QSP9 38355796
    898936 8v9k:j (3.1) BS01 rna ? GO:0000049 ... A0QSD0 38355796
    898937 8v9k:k (3.1) BS01 rna ? GO:0003735 ... A0QSL6 38355796
    898938 8v9k:l (3.1) BS01 rna ? GO:0000049 ... A0QS96 38355796
    898939 8v9k:m (3.1) BS01 rna ? GO:0000049 ... A0QSL5 38355796
    898940 8v9k:n (3.1) BS01 rna ? GO:0003735 ... A0QSG2 38355796
    898941 8v9k:o (3.1) BS01 rna ? GO:0003735 ... A0QVQ3 38355796
    898942 8v9k:o (3.1) BS02 rna ? GO:0003735 ... A0QVQ3 38355796
    898943 8v9k:p (3.1) BS01 rna ? GO:0003735 ... A0QV37 38355796
    898944 8v9k:q (3.1) BS01 rna ? GO:0003735 ... A0QSE0 38355796
    898945 8v9k:r (3.1) BS01 rna ? GO:0003735 ... A0R7F7 38355796
    898946 8v9k:s (3.1) BS01 rna ? GO:0000028 ... A0QSD5 38355796
    898947 8v9k:t (3.1) BS01 rna ? GO:0003723 ... A0R102 38355796
    898948 8v9k:u (3.1) BS01 rna N/A N/A A0QR10 38355796
    898949 8v9k:z (3.1) BS01 rna ? GO:0001666 ... P9WL63 38355796
    898950 8v9k:z (3.1) BS02 rna ? GO:0001666 ... P9WL63 38355796
    898951 8v9l:1 (3.0) BS01 rna ? GO:0003735 ... A0QSD9 38355796
    898952 8v9l:2 (3.0) BS01 rna ? GO:0003735 ... A0QSG7 38355796
    898953 8v9l:2 (3.0) BS02 rna ? GO:0003735 ... A0QSG7 38355796
    898954 8v9l:3 (3.0) BS01 rna ? GO:0003735 ... A0R215 38355796
    898955 8v9l:4 (3.0) BS01 rna ? GO:0003735 ... A0R3I9 38355796
    898956 8v9l:5 (3.0) BS01 rna ? GO:0003735 ... A0QS39 38355796
    898957 8v9l:5 (3.0) BS02 ZN ? GO:0003735 ... A0QS39 38355796
    898958 8v9l:6 (3.0) BS01 rna ? GO:0003735 ... A0R7K0 38355796
    898959 8v9l:7 (3.0) BS01 rna ? GO:0003735 ... A0QYU7 38355796
    898960 8v9l:8 (3.0) BS01 rna ? GO:0003735 ... A0QSL4 38355796
    898961 8v9l:C (3.0) BS01 rna ? GO:0002181 ... A0QSD4 38355796
    898962 8v9l:D (3.0) BS01 rna ? GO:0003735 ... A0QSD1 38355796
    898963 8v9l:E (3.0) BS01 rna ? GO:0003735 ... A0QSD2 38355796
    898964 8v9l:F (3.0) BS01 rna ? GO:0000049 ... A0QSG1 38355796
    898965 8v9l:F (3.0) BS02 rna ? GO:0000049 ... A0QSG1 38355796
    898966 8v9l:G (3.0) BS01 rna ? GO:0002181 ... A0QSG4 38355796
    898967 8v9l:H (3.0) BS01 rna ? GO:0003735 ... A0R7F6 38355796
    898968 8v9l:I (3.0) BS01 rna ? GO:0003735 ... A0QS62 38355796
    898969 8v9l:J (3.0) BS01 rna ? GO:0003735 ... A0QS45 38355796
    898970 8v9l:L (3.0) BS01 rna ? GO:0003729 ... A0QSP8 38355796
    898971 8v9l:M (3.0) BS01 rna ? GO:0003735 ... A0QSF9 38355796
    898972 8v9l:M (3.0) BS02 rna ? GO:0003735 ... A0QSF9 38355796
    898973 8v9l:N (3.0) BS01 rna ? GO:0003735 ... A0QSG8 38355796
    898974 8v9l:O (3.0) BS01 rna ? GO:0003735 ... A0QSD8 38355796
    898975 8v9l:P (3.0) BS01 rna ? GO:0003735 ... A0QSL9 38355796
    898976 8v9l:Q (3.0) BS01 rna ? GO:0003735 ... A0QSG5 38355796
    898977 8v9l:Q (3.0) BS02 rna ? GO:0003735 ... A0QSG5 38355796
    898978 8v9l:R (3.0) BS01 rna ? GO:0003735 ... A0QV42 38355796
    898979 8v9l:R (3.0) BS02 rna ? GO:0003735 ... A0QV42 38355796
    898980 8v9l:S (3.0) BS01 rna ? GO:0000027 ... A0QYU6 38355796
    898981 8v9l:T (3.0) BS01 rna ? GO:0003723 ... A0R151 38355796
    898982 8v9l:U (3.0) BS01 rna ? GO:0003735 ... A0QSD6 38355796
    898983 8v9l:V (3.0) BS01 rna ? GO:0003735 ... A0QSD3 38355796
    898984 8v9l:W (3.0) BS01 rna ? GO:0003723 ... A0QSG0 38355796
    898985 8v9l:X (3.0) BS01 rna ? GO:0003723 ... A0R3D2 38355796
    898986 8v9l:X (3.0) BS02 rna ? GO:0003723 ... A0R3D2 38355796
    898987 8v9l:Y (3.0) BS01 rna ? GO:0003735 ... A0R150 38355796
    898988 8v9l:Z (3.0) BS01 rna ? GO:0003735 ... A0QV03 38355796
    898989 8v9l:b (3.0) BS01 rna ? GO:0003735 ... A0QVB8 38355796
    898990 8v9l:c (3.0) BS01 rna ? GO:0003676 ... A0QSD7 38355796
    898991 8v9l:d (3.0) BS01 rna ? GO:0003723 ... A0QSL7 38355796
    898992 8v9l:e (3.0) BS01 rna ? GO:0003723 ... A0QSG6 38355796
    898993 8v9l:f (3.0) BS01 rna ? GO:0003735 ... A0R7F9 38355796
    898994 8v9l:g (3.0) BS01 rna ? GO:0000049 ... A0QS97 38355796
    898995 8v9l:h (3.0) BS01 rna ? GO:0003735 ... A0QSG3 38355796
    898996 8v9l:i (3.0) BS01 rna ? GO:0003723 ... A0QSP9 38355796
    898997 8v9l:j (3.0) BS01 rna ? GO:0000049 ... A0QSD0 38355796
    898998 8v9l:k (3.0) BS01 rna ? GO:0003735 ... A0QSL6 38355796
    898999 8v9l:l (3.0) BS01 rna ? GO:0000049 ... A0QS96 38355796
    899000 8v9l:m (3.0) BS01 rna ? GO:0000049 ... A0QSL5 38355796

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).