SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    898801 8waw:o (3.02) BS03 dna 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898802 8waw:o (3.02) BS04 rna 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898803 8waw:o (3.02) BS05 ZN 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898804 8waw:o (3.02) BS06 ZN 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898805 8waw:o (3.02) BS07 MG 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898806 8waw:o (3.02) BS08 W0F 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898807 8waw:p (3.02) BS01 dna 2.7.7.6 GO:0000428 ... I3LGP4 38127763
    898808 8waw:p (3.02) BS02 rna 2.7.7.6 GO:0000428 ... I3LGP4 38127763
    898809 8waw:p (3.02) BS03 W0F 2.7.7.6 GO:0000428 ... I3LGP4 38127763
    898810 8waw:p (3.02) BS04 ZN 2.7.7.6 GO:0000428 ... I3LGP4 38127763
    898811 8waw:q (3.02) BS01 ZN ? GO:0000428 ... I3LCH3 38127763
    898812 8waw:s (3.02) BS01 dna ? GO:0001054 ... I3LSI7 38127763
    898813 8waw:w (3.02) BS01 ZN ? GO:0000428 ... P60899 38127763
    898814 8waw:w (3.02) BS02 ZN ? GO:0000428 ... P60899 38127763
    898815 8waw:x (3.02) BS01 ZN ? GO:0000428 ... A0A8W4F9W9 38127763
    898816 8waw:z (3.02) BS01 ZN ? GO:0003677 ... A0A8D0JYF1 38127763
    898817 8wax:o (2.75) BS01 peptide 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898818 8wax:o (2.75) BS02 dna 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898819 8wax:o (2.75) BS03 dna 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898820 8wax:o (2.75) BS04 rna 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898821 8wax:o (2.75) BS05 ZN 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898822 8wax:o (2.75) BS06 ZN 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898823 8wax:o (2.75) BS07 MG 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898824 8wax:o (2.75) BS08 W0F 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898825 8wax:p (2.75) BS01 dna 2.7.7.6 GO:0000428 ... I3LGP4 38127763
    898826 8wax:p (2.75) BS02 rna 2.7.7.6 GO:0000428 ... I3LGP4 38127763
    898827 8wax:p (2.75) BS03 W0F 2.7.7.6 GO:0000428 ... I3LGP4 38127763
    898828 8wax:p (2.75) BS04 ZN 2.7.7.6 GO:0000428 ... I3LGP4 38127763
    898829 8wax:q (2.75) BS01 ZN ? GO:0000428 ... I3LCH3 38127763
    898830 8wax:s (2.75) BS01 dna ? GO:0001054 ... I3LSI7 38127763
    898831 8wax:w (2.75) BS01 ZN ? GO:0000428 ... P60899 38127763
    898832 8wax:w (2.75) BS02 ZN ? GO:0000428 ... P60899 38127763
    898833 8wax:x (2.75) BS01 ZN ? GO:0000428 ... A0A8W4F9W9 38127763
    898834 8wax:z (2.75) BS01 ZN ? GO:0001054 ... A0A4X1TRS6 38127763
    898835 8way:o (2.85) BS01 peptide 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898836 8way:o (2.85) BS02 dna 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898837 8way:o (2.85) BS03 dna 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898838 8way:o (2.85) BS04 rna 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898839 8way:o (2.85) BS05 ZN 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898840 8way:o (2.85) BS06 ZN 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898841 8way:o (2.85) BS07 MG 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898842 8way:o (2.85) BS08 W0F 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898843 8way:p (2.85) BS01 dna 2.7.7.6 GO:0000428 ... I3LGP4 38127763
    898844 8way:p (2.85) BS02 rna 2.7.7.6 GO:0000428 ... I3LGP4 38127763
    898845 8way:p (2.85) BS03 W0F 2.7.7.6 GO:0000428 ... I3LGP4 38127763
    898846 8way:p (2.85) BS04 ZN 2.7.7.6 GO:0000428 ... I3LGP4 38127763
    898847 8way:q (2.85) BS01 ZN ? GO:0000428 ... I3LCH3 38127763
    898848 8way:s (2.85) BS01 dna ? GO:0001054 ... I3LSI7 38127763
    898849 8way:w (2.85) BS01 ZN ? GO:0000428 ... P60899 38127763
    898850 8way:w (2.85) BS02 ZN ? GO:0000428 ... P60899 38127763
    898851 8way:x (2.85) BS01 ZN ? GO:0000428 ... A0A8W4F9W9 38127763
    898852 8way:z (2.85) BS01 ZN ? GO:0003677 ... A0A8D0JYF1 38127763
    898853 8waz:o (2.76) BS01 peptide 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898854 8waz:o (2.76) BS02 dna 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898855 8waz:o (2.76) BS03 dna 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898856 8waz:o (2.76) BS04 rna 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898857 8waz:o (2.76) BS05 ZN 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898858 8waz:o (2.76) BS06 ZN 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898859 8waz:o (2.76) BS07 MG 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898860 8waz:o (2.76) BS08 W0F 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898861 8waz:p (2.76) BS01 dna 2.7.7.6 GO:0000428 ... I3LGP4 38127763
    898862 8waz:p (2.76) BS02 rna 2.7.7.6 GO:0000428 ... I3LGP4 38127763
    898863 8waz:p (2.76) BS03 W0F 2.7.7.6 GO:0000428 ... I3LGP4 38127763
    898864 8waz:p (2.76) BS04 ZN 2.7.7.6 GO:0000428 ... I3LGP4 38127763
    898865 8waz:q (2.76) BS01 ZN ? GO:0000428 ... I3LCH3 38127763
    898866 8waz:s (2.76) BS01 dna ? GO:0001054 ... I3LSI7 38127763
    898867 8waz:w (2.76) BS01 ZN ? GO:0000428 ... P60899 38127763
    898868 8waz:w (2.76) BS02 ZN ? GO:0000428 ... P60899 38127763
    898869 8waz:x (2.76) BS01 ZN ? GO:0000428 ... A0A8W4F9W9 38127763
    898870 8waz:z (2.76) BS01 ZN ? GO:0001054 ... A0A4X1TRS6 38127763
    898871 8wb0:o (2.94) BS01 peptide 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898872 8wb0:o (2.94) BS02 dna 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898873 8wb0:o (2.94) BS03 dna 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898874 8wb0:o (2.94) BS04 rna 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898875 8wb0:o (2.94) BS05 ZN 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898876 8wb0:o (2.94) BS06 ZN 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898877 8wb0:o (2.94) BS07 MG 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898878 8wb0:o (2.94) BS08 W0F 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    898879 8wb0:p (2.94) BS01 dna 2.7.7.6 GO:0000428 ... I3LGP4 38127763
    898880 8wb0:p (2.94) BS02 rna 2.7.7.6 GO:0000428 ... I3LGP4 38127763
    898881 8wb0:p (2.94) BS03 W0F 2.7.7.6 GO:0000428 ... I3LGP4 38127763
    898882 8wb0:p (2.94) BS04 ZN 2.7.7.6 GO:0000428 ... I3LGP4 38127763
    898883 8wb0:q (2.94) BS01 ZN ? GO:0000428 ... I3LCH3 38127763
    898884 8wb0:s (2.94) BS01 dna ? GO:0001054 ... I3LSI7 38127763
    898885 8wb0:w (2.94) BS01 ZN ? GO:0000428 ... P60899 38127763
    898886 8wb0:w (2.94) BS02 ZN ? GO:0000428 ... P60899 38127763
    898887 8wb0:x (2.94) BS01 ZN ? GO:0000428 ... A0A8W4F9W9 38127763
    898888 8wb0:z (2.94) BS01 ZN ? GO:0003677 ... A0A8D0JYF1 38127763
    898889 8wb1:A (1.72) BS01 GDP N/A GO:0003924 ... H2Q5M0 N/A
    898890 8wb1:A (1.72) BS02 W3T N/A GO:0003924 ... H2Q5M0 N/A
    898891 8wb2:A (1.9) BS01 HEM ? GO:0000325 ... Q9FGT8 38103756
    898892 8wb3:A (2.49) BS01 FE N/A GO:0004322 ... P02794 N/A
    898893 8wb3:A (2.49) BS02 FE N/A GO:0004322 ... P02794 N/A
    898894 8wb3:A (2.49) BS03 CA N/A GO:0004322 ... P02794 N/A
    898895 8wb4:0 (2.47) BS01 CLA N/A N/A N/A 38806516
    898896 8wb4:0 (2.47) BS02 CLA N/A N/A N/A 38806516
    898897 8wb4:0 (2.47) BS03 CLA N/A N/A N/A 38806516
    898898 8wb4:0 (2.47) BS04 CLA N/A N/A N/A 38806516
    898899 8wb4:0 (2.47) BS05 CLA N/A N/A N/A 38806516
    898900 8wb4:0 (2.47) BS06 CLA N/A N/A N/A 38806516
    898901 8wb4:0 (2.47) BS07 CLA N/A N/A N/A 38806516
    898902 8wb4:0 (2.47) BS08 CLA N/A N/A N/A 38806516
    898903 8wb4:0 (2.47) BS09 CLA N/A N/A N/A 38806516
    898904 8wb4:0 (2.47) BS10 KC2 N/A N/A N/A 38806516
    898905 8wb4:0 (2.47) BS11 CLA N/A N/A N/A 38806516
    898906 8wb4:0 (2.47) BS12 CLA N/A N/A N/A 38806516
    898907 8wb4:0 (2.47) BS13 CLA N/A N/A N/A 38806516
    898908 8wb4:0 (2.47) BS14 IHT N/A N/A N/A 38806516
    898909 8wb4:0 (2.47) BS15 II0 N/A N/A N/A 38806516
    898910 8wb4:0 (2.47) BS16 II0 N/A N/A N/A 38806516
    898911 8wb4:0 (2.47) BS17 II0 N/A N/A N/A 38806516
    898912 8wb4:0 (2.47) BS18 IHT N/A N/A N/A 38806516
    898913 8wb4:0 (2.47) BS19 II0 N/A N/A N/A 38806516
    898914 8wb4:1 (2.47) BS01 CLA N/A N/A N/A 38806516
    898915 8wb4:1 (2.47) BS02 CLA N/A N/A N/A 38806516
    898916 8wb4:1 (2.47) BS03 CLA N/A N/A N/A 38806516
    898917 8wb4:1 (2.47) BS04 CLA N/A N/A N/A 38806516
    898918 8wb4:1 (2.47) BS05 CLA N/A N/A N/A 38806516
    898919 8wb4:1 (2.47) BS06 CLA N/A N/A N/A 38806516
    898920 8wb4:1 (2.47) BS07 CLA N/A N/A N/A 38806516
    898921 8wb4:1 (2.47) BS08 CLA N/A N/A N/A 38806516
    898922 8wb4:1 (2.47) BS09 CLA N/A N/A N/A 38806516
    898923 8wb4:1 (2.47) BS10 KC2 N/A N/A N/A 38806516
    898924 8wb4:1 (2.47) BS11 CLA N/A N/A N/A 38806516
    898925 8wb4:1 (2.47) BS12 CLA N/A N/A N/A 38806516
    898926 8wb4:1 (2.47) BS13 CLA N/A N/A N/A 38806516
    898927 8wb4:1 (2.47) BS14 II0 N/A N/A N/A 38806516
    898928 8wb4:1 (2.47) BS15 II3 N/A N/A N/A 38806516
    898929 8wb4:1 (2.47) BS16 II0 N/A N/A N/A 38806516
    898930 8wb4:1 (2.47) BS17 II0 N/A N/A N/A 38806516
    898931 8wb4:1 (2.47) BS18 IHT N/A N/A N/A 38806516
    898932 8wb4:1 (2.47) BS19 II0 N/A N/A N/A 38806516
    898933 8wb4:2 (2.47) BS01 II0 N/A N/A N/A 38806516
    898934 8wb4:2 (2.47) BS02 CLA N/A N/A N/A 38806516
    898935 8wb4:2 (2.47) BS03 CLA N/A N/A N/A 38806516
    898936 8wb4:2 (2.47) BS04 CLA N/A N/A N/A 38806516
    898937 8wb4:2 (2.47) BS05 CLA N/A N/A N/A 38806516
    898938 8wb4:2 (2.47) BS06 CLA N/A N/A N/A 38806516
    898939 8wb4:2 (2.47) BS07 CLA N/A N/A N/A 38806516
    898940 8wb4:2 (2.47) BS08 CLA N/A N/A N/A 38806516
    898941 8wb4:2 (2.47) BS09 CLA N/A N/A N/A 38806516
    898942 8wb4:2 (2.47) BS10 KC2 N/A N/A N/A 38806516
    898943 8wb4:2 (2.47) BS11 CLA N/A N/A N/A 38806516
    898944 8wb4:2 (2.47) BS12 CLA N/A N/A N/A 38806516
    898945 8wb4:2 (2.47) BS13 II0 N/A N/A N/A 38806516
    898946 8wb4:2 (2.47) BS14 II0 N/A N/A N/A 38806516
    898947 8wb4:2 (2.47) BS15 II0 N/A N/A N/A 38806516
    898948 8wb4:2 (2.47) BS16 IHT N/A N/A N/A 38806516
    898949 8wb4:2 (2.47) BS17 II0 N/A N/A N/A 38806516
    898950 8wb4:3 (2.47) BS01 CLA N/A N/A N/A 38806516
    898951 8wb4:3 (2.47) BS02 II0 N/A N/A N/A 38806516
    898952 8wb4:3 (2.47) BS03 CLA N/A N/A N/A 38806516
    898953 8wb4:3 (2.47) BS04 CLA N/A N/A N/A 38806516
    898954 8wb4:3 (2.47) BS05 CLA N/A N/A N/A 38806516
    898955 8wb4:3 (2.47) BS06 CLA N/A N/A N/A 38806516
    898956 8wb4:3 (2.47) BS07 CLA N/A N/A N/A 38806516
    898957 8wb4:3 (2.47) BS08 CLA N/A N/A N/A 38806516
    898958 8wb4:3 (2.47) BS09 CLA N/A N/A N/A 38806516
    898959 8wb4:3 (2.47) BS10 CLA N/A N/A N/A 38806516
    898960 8wb4:3 (2.47) BS11 CLA N/A N/A N/A 38806516
    898961 8wb4:3 (2.47) BS12 CLA N/A N/A N/A 38806516
    898962 8wb4:3 (2.47) BS13 II0 N/A N/A N/A 38806516
    898963 8wb4:3 (2.47) BS14 II0 N/A N/A N/A 38806516
    898964 8wb4:3 (2.47) BS15 II0 N/A N/A N/A 38806516
    898965 8wb4:3 (2.47) BS16 8CT N/A N/A N/A 38806516
    898966 8wb4:4 (2.47) BS01 CLA N/A N/A N/A 38806516
    898967 8wb4:4 (2.47) BS02 CLA N/A N/A N/A 38806516
    898968 8wb4:4 (2.47) BS03 CLA N/A N/A N/A 38806516
    898969 8wb4:4 (2.47) BS04 CLA N/A N/A N/A 38806516
    898970 8wb4:4 (2.47) BS05 CLA N/A N/A N/A 38806516
    898971 8wb4:4 (2.47) BS06 CLA N/A N/A N/A 38806516
    898972 8wb4:4 (2.47) BS07 CLA N/A N/A N/A 38806516
    898973 8wb4:4 (2.47) BS08 CLA N/A N/A N/A 38806516
    898974 8wb4:4 (2.47) BS09 CLA N/A N/A N/A 38806516
    898975 8wb4:4 (2.47) BS10 KC2 N/A N/A N/A 38806516
    898976 8wb4:4 (2.47) BS11 CLA N/A N/A N/A 38806516
    898977 8wb4:4 (2.47) BS12 CLA N/A N/A N/A 38806516
    898978 8wb4:4 (2.47) BS13 CLA N/A N/A N/A 38806516
    898979 8wb4:4 (2.47) BS14 IHT N/A N/A N/A 38806516
    898980 8wb4:4 (2.47) BS15 II0 N/A N/A N/A 38806516
    898981 8wb4:4 (2.47) BS16 II0 N/A N/A N/A 38806516
    898982 8wb4:4 (2.47) BS17 IHT N/A N/A N/A 38806516
    898983 8wb4:4 (2.47) BS18 II0 N/A N/A N/A 38806516
    898984 8wb4:4 (2.47) BS19 II0 N/A N/A N/A 38806516
    898985 8wb4:5 (2.47) BS01 CLA N/A N/A N/A 38806516
    898986 8wb4:5 (2.47) BS02 II0 N/A N/A N/A 38806516
    898987 8wb4:5 (2.47) BS03 CLA N/A N/A N/A 38806516
    898988 8wb4:5 (2.47) BS04 CLA N/A N/A N/A 38806516
    898989 8wb4:5 (2.47) BS05 CLA N/A N/A N/A 38806516
    898990 8wb4:5 (2.47) BS06 CLA N/A N/A N/A 38806516
    898991 8wb4:5 (2.47) BS07 CLA N/A N/A N/A 38806516
    898992 8wb4:5 (2.47) BS08 CLA N/A N/A N/A 38806516
    898993 8wb4:5 (2.47) BS09 CLA N/A N/A N/A 38806516
    898994 8wb4:5 (2.47) BS10 CLA N/A N/A N/A 38806516
    898995 8wb4:5 (2.47) BS11 CLA N/A N/A N/A 38806516
    898996 8wb4:5 (2.47) BS12 KC2 N/A N/A N/A 38806516
    898997 8wb4:5 (2.47) BS13 CLA N/A N/A N/A 38806516
    898998 8wb4:5 (2.47) BS14 CLA N/A N/A N/A 38806516
    898999 8wb4:5 (2.47) BS15 II0 N/A N/A N/A 38806516
    899000 8wb4:5 (2.47) BS16 II0 N/A N/A N/A 38806516

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).