SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    899401 8wcl:5 (2.65) BS18 CLA N/A GO:0009765 ... A0A679BXP6 39030906
    899402 8wcl:6 (2.65) BS01 A86 N/A GO:0009765 ... N/A 39030906
    899403 8wcl:6 (2.65) BS02 A86 N/A GO:0009765 ... N/A 39030906
    899404 8wcl:6 (2.65) BS03 A86 N/A GO:0009765 ... N/A 39030906
    899405 8wcl:6 (2.65) BS04 A86 N/A GO:0009765 ... N/A 39030906
    899406 8wcl:6 (2.65) BS05 CLA N/A GO:0009765 ... N/A 39030906
    899407 8wcl:6 (2.65) BS06 CLA N/A GO:0009765 ... N/A 39030906
    899408 8wcl:6 (2.65) BS07 KC2 N/A GO:0009765 ... N/A 39030906
    899409 8wcl:6 (2.65) BS08 CLA N/A GO:0009765 ... N/A 39030906
    899410 8wcl:6 (2.65) BS09 KC2 N/A GO:0009765 ... N/A 39030906
    899411 8wcl:6 (2.65) BS10 KC1 N/A GO:0009765 ... N/A 39030906
    899412 8wcl:6 (2.65) BS11 CLA N/A GO:0009765 ... N/A 39030906
    899413 8wcl:6 (2.65) BS12 KC1 N/A GO:0009765 ... N/A 39030906
    899414 8wcl:6 (2.65) BS13 CLA N/A GO:0009765 ... N/A 39030906
    899415 8wcl:6 (2.65) BS14 CLA N/A GO:0009765 ... N/A 39030906
    899416 8wcl:6 (2.65) BS15 A86 N/A GO:0009765 ... N/A 39030906
    899417 8wcl:6 (2.65) BS16 A86 N/A GO:0009765 ... N/A 39030906
    899418 8wcl:7 (2.65) BS01 CLA N/A GO:0009765 ... N/A 39030906
    899419 8wcl:7 (2.65) BS02 A86 N/A GO:0009765 ... N/A 39030906
    899420 8wcl:7 (2.65) BS03 A86 N/A GO:0009765 ... N/A 39030906
    899421 8wcl:7 (2.65) BS04 A86 N/A GO:0009765 ... N/A 39030906
    899422 8wcl:7 (2.65) BS05 A86 N/A GO:0009765 ... N/A 39030906
    899423 8wcl:7 (2.65) BS06 A86 N/A GO:0009765 ... N/A 39030906
    899424 8wcl:7 (2.65) BS07 A86 N/A GO:0009765 ... N/A 39030906
    899425 8wcl:7 (2.65) BS08 CLA N/A GO:0009765 ... N/A 39030906
    899426 8wcl:7 (2.65) BS09 CLA N/A GO:0009765 ... N/A 39030906
    899427 8wcl:7 (2.65) BS10 KC2 N/A GO:0009765 ... N/A 39030906
    899428 8wcl:7 (2.65) BS11 CLA N/A GO:0009765 ... N/A 39030906
    899429 8wcl:7 (2.65) BS12 KC2 N/A GO:0009765 ... N/A 39030906
    899430 8wcl:7 (2.65) BS13 KC1 N/A GO:0009765 ... N/A 39030906
    899431 8wcl:7 (2.65) BS14 CLA N/A GO:0009765 ... N/A 39030906
    899432 8wcl:7 (2.65) BS15 KC1 N/A GO:0009765 ... N/A 39030906
    899433 8wcl:7 (2.65) BS16 CLA N/A GO:0009765 ... N/A 39030906
    899434 8wcl:8 (2.65) BS01 CLA N/A GO:0009765 ... A0A679BXP6 39030906
    899435 8wcl:8 (2.65) BS02 A86 N/A GO:0009765 ... A0A679BXP6 39030906
    899436 8wcl:8 (2.65) BS03 A86 N/A GO:0009765 ... A0A679BXP6 39030906
    899437 8wcl:8 (2.65) BS04 A86 N/A GO:0009765 ... A0A679BXP6 39030906
    899438 8wcl:8 (2.65) BS05 A86 N/A GO:0009765 ... A0A679BXP6 39030906
    899439 8wcl:8 (2.65) BS06 A86 N/A GO:0009765 ... A0A679BXP6 39030906
    899440 8wcl:8 (2.65) BS07 A86 N/A GO:0009765 ... A0A679BXP6 39030906
    899441 8wcl:8 (2.65) BS08 CLA N/A GO:0009765 ... A0A679BXP6 39030906
    899442 8wcl:8 (2.65) BS09 KC2 N/A GO:0009765 ... A0A679BXP6 39030906
    899443 8wcl:8 (2.65) BS10 CLA N/A GO:0009765 ... A0A679BXP6 39030906
    899444 8wcl:8 (2.65) BS11 KC2 N/A GO:0009765 ... A0A679BXP6 39030906
    899445 8wcl:8 (2.65) BS12 KC1 N/A GO:0009765 ... A0A679BXP6 39030906
    899446 8wcl:8 (2.65) BS13 CLA N/A GO:0009765 ... A0A679BXP6 39030906
    899447 8wcl:8 (2.65) BS14 KC1 N/A GO:0009765 ... A0A679BXP6 39030906
    899448 8wcl:8 (2.65) BS15 CLA N/A GO:0009765 ... A0A679BXP6 39030906
    899449 8wcl:8 (2.65) BS16 CLA N/A GO:0009765 ... A0A679BXP6 39030906
    899450 8wcl:8 (2.65) BS17 CLA N/A GO:0009765 ... A0A679BXP6 39030906
    899451 8wcl:8 (2.65) BS18 A86 N/A GO:0009765 ... A0A679BXP6 39030906
    899452 8wcl:9 (2.65) BS01 A86 N/A N/A A0A8S0JDZ7 39030906
    899453 8wcl:9 (2.65) BS02 A86 N/A N/A A0A8S0JDZ7 39030906
    899454 8wcl:9 (2.65) BS03 A86 N/A N/A A0A8S0JDZ7 39030906
    899455 8wcl:9 (2.65) BS04 A86 N/A N/A A0A8S0JDZ7 39030906
    899456 8wcl:9 (2.65) BS05 A86 N/A N/A A0A8S0JDZ7 39030906
    899457 8wcl:9 (2.65) BS06 A86 N/A N/A A0A8S0JDZ7 39030906
    899458 8wcl:9 (2.65) BS07 CLA N/A N/A A0A8S0JDZ7 39030906
    899459 8wcl:9 (2.65) BS08 CLA N/A N/A A0A8S0JDZ7 39030906
    899460 8wcl:9 (2.65) BS09 KC2 N/A N/A A0A8S0JDZ7 39030906
    899461 8wcl:9 (2.65) BS10 CLA N/A N/A A0A8S0JDZ7 39030906
    899462 8wcl:9 (2.65) BS11 CLA N/A N/A A0A8S0JDZ7 39030906
    899463 8wcl:9 (2.65) BS12 CLA N/A N/A A0A8S0JDZ7 39030906
    899464 8wcl:9 (2.65) BS13 CLA N/A N/A A0A8S0JDZ7 39030906
    899465 8wcl:9 (2.65) BS14 KC1 N/A N/A A0A8S0JDZ7 39030906
    899466 8wcl:9 (2.65) BS15 CLA N/A N/A A0A8S0JDZ7 39030906
    899467 8wcl:9 (2.65) BS16 CLA N/A N/A A0A8S0JDZ7 39030906
    899468 8wcn:A (3.2) BS01 G2P 2.7.7.65 GO:0005886 ... A0A072ZHL9 38424057
    899469 8wcn:A (3.2) BS02 G2P 2.7.7.65 GO:0005886 ... A0A072ZHL9 38424057
    899470 8wcn:A (3.2) BS03 G2P 2.7.7.65 GO:0005886 ... A0A072ZHL9 38424057
    899471 8wcn:B (3.2) BS01 G2P 2.7.7.65 GO:0005886 ... A0A072ZHL9 38424057
    899472 8wcn:B (3.2) BS02 G2P 2.7.7.65 GO:0005886 ... A0A072ZHL9 38424057
    899473 8wcn:B (3.2) BS03 G2P 2.7.7.65 GO:0005886 ... A0A072ZHL9 38424057
    899474 8wcn:B (3.2) BS04 G2P 2.7.7.65 GO:0005886 ... A0A072ZHL9 38424057
    899475 8wcn:B (3.2) BS05 MG 2.7.7.65 GO:0005886 ... A0A072ZHL9 38424057
    899476 8wco:A (2.6) BS01 ACO ? GO:0000287 ... Q9I562 38677288
    899477 8wco:A (2.6) BS02 ACO ? GO:0000287 ... Q9I562 38677288
    899478 8wco:B (2.6) BS01 ACO ? GO:0000287 ... Q9I562 38677288
    899479 8wco:B (2.6) BS02 ACO ? GO:0000287 ... Q9I562 38677288
    899480 8wco:C (2.6) BS01 ACO ? GO:0000287 ... Q9I562 38677288
    899481 8wco:C (2.6) BS02 ACO ? GO:0000287 ... Q9I562 38677288
    899482 8wcs:A (3.1) BS01 rna N/A N/A N/A 38661236
    899483 8wd0:A (2.6) BS01 GTP N/A GO:0000226 ... P81947 38905886
    899484 8wd0:A (2.6) BS02 CA N/A GO:0000226 ... P81947 38905886
    899485 8wd0:B (2.6) BS01 W4F N/A GO:0003924 ... A0A287AGU7 38905886
    899486 8wd0:B (2.6) BS02 GDP N/A GO:0003924 ... A0A287AGU7 38905886
    899487 8wd0:C (2.6) BS01 GTP N/A GO:0000226 ... P81947 38905886
    899488 8wd0:C (2.6) BS02 CA N/A GO:0000226 ... P81947 38905886
    899489 8wd0:D (2.6) BS01 GTP N/A GO:0003924 ... A0A287AGU7 38905886
    899490 8wd0:D (2.6) BS02 W4F N/A GO:0003924 ... A0A287AGU7 38905886
    899491 8wd0:F (2.6) BS01 ACP N/A GO:0000226 ... A0A8V0Z8P0 38905886
    899492 8wd2:A (1.85) BS01 ZN ? GO:0000976 ... P04637 N/A
    899493 8wd2:B (1.85) BS01 ZN ? GO:0000976 ... P04637 N/A
    899494 8wd3:A (3.3) BS01 ZN 1.14.11.66
    1.14.11.69
    N/A O75164 N/A
    899495 8wd3:B (3.3) BS01 ZN 1.14.11.66
    1.14.11.69
    N/A O75164 N/A
    899496 8wd4:A (2.55) BS01 W7W 2.7.10.1 GO:0004672 ... P00533 38065292
    899497 8wd8:A (2.9) BS01 dna ? GO:0003676 ... A0A0Q2M2Z1 38295801
    899498 8wd8:A (2.9) BS02 dna ? GO:0003676 ... A0A0Q2M2Z1 38295801
    899499 8wd8:A (2.9) BS03 ZN ? GO:0003676 ... A0A0Q2M2Z1 38295801
    899500 8wd8:A (2.9) BS04 MG ? GO:0003676 ... A0A0Q2M2Z1 38295801
    899501 8wd8:A (2.9) BS05 MG ? GO:0003676 ... A0A0Q2M2Z1 38295801
    899502 8wd8:A (2.9) BS06 MG ? GO:0003676 ... A0A0Q2M2Z1 38295801
    899503 8wd8:B (2.9) BS01 dna ? GO:0003676 ... A0A0Q2M2Z1 38295801
    899504 8wd8:B (2.9) BS02 dna ? GO:0003676 ... A0A0Q2M2Z1 38295801
    899505 8wd8:B (2.9) BS03 ZN ? GO:0003676 ... A0A0Q2M2Z1 38295801
    899506 8wd8:B (2.9) BS04 MG ? GO:0003676 ... A0A0Q2M2Z1 38295801
    899507 8wd8:B (2.9) BS05 MG ? GO:0003676 ... A0A0Q2M2Z1 38295801
    899508 8wd8:B (2.9) BS06 MG ? GO:0003676 ... A0A0Q2M2Z1 38295801
    899509 8wda:A (3.26) BS01 peptide N/A GO:0015833 ... I6X811 N/A
    899510 8wdb:D (2.86) BS01 ATP N/A GO:0000166 ... I6Y482 N/A
    899511 8wdb:D (2.86) BS02 ATP N/A GO:0000166 ... I6Y482 N/A
    899512 8wdb:D (2.86) BS03 MG N/A GO:0000166 ... I6Y482 N/A
    899513 8wdb:D (2.86) BS04 MG N/A GO:0000166 ... I6Y482 N/A
    899514 8wdd:A (3.9) BS01 VZK N/A GO:0003677 ... P02769 N/A
    899515 8wdd:A (3.9) BS02 VZK N/A GO:0003677 ... P02769 N/A
    899516 8wdd:B (3.9) BS01 VZK N/A GO:0003677 ... P02769 N/A
    899517 8wdg:A (0.99) BS01 MG 5.3.1.5 GO:0000287 ... P24300 37793321
    899518 8wdg:A (0.99) BS02 MG 5.3.1.5 GO:0000287 ... P24300 37793321
    899519 8wdg:A (0.99) BS03 XYL 5.3.1.5 GO:0000287 ... P24300 37793321
    899520 8wdg:A (0.99) BS04 MG 5.3.1.5 GO:0000287 ... P24300 37793321
    899521 8wdh:A (1.7) BS01 MG 5.3.1.5 GO:0000287 ... P24300 N/A
    899522 8wdh:A (1.7) BS02 MG 5.3.1.5 GO:0000287 ... P24300 N/A
    899523 8wdk:V (3.64) BS01 W6U N/A N/A P40337 N/A
    899524 8wdk:W (3.64) BS01 W6U N/A GO:0004672 ... P30291 N/A
    899525 8wdn:A (1.55) BS01 ZN N/A GO:0004114 ... Q08499 38489246
    899526 8wdn:A (1.55) BS02 W8E N/A GO:0004114 ... Q08499 38489246
    899527 8wdn:B (1.55) BS01 ZN N/A GO:0004114 ... Q08499 38489246
    899528 8wdn:B (1.55) BS02 W8E N/A GO:0004114 ... Q08499 38489246
    899529 8wdo:A (1.67) BS01 ZN N/A GO:0004114 ... Q08499 38489246
    899530 8wdo:A (1.67) BS02 W8O N/A GO:0004114 ... Q08499 38489246
    899531 8wdo:B (1.67) BS01 ZN N/A GO:0004114 ... Q08499 38489246
    899532 8wdo:B (1.67) BS02 W8O N/A GO:0004114 ... Q08499 38489246
    899533 8wdq:A (2.2) BS01 IPD N/A GO:0003723 ... Q9HXI4 N/A
    899534 8wdq:A (2.2) BS02 CA N/A GO:0003723 ... Q9HXI4 N/A
    899535 8wdq:A (2.2) BS03 CA N/A GO:0003723 ... Q9HXI4 N/A
    899536 8wdq:B (2.2) BS01 IPD N/A GO:0003723 ... Q9HXI4 N/A
    899537 8wdq:B (2.2) BS02 CA N/A GO:0003723 ... Q9HXI4 N/A
    899538 8wdq:B (2.2) BS03 CA N/A GO:0003723 ... Q9HXI4 N/A
    899539 8wdr:A (3.47) BS01 ZN N/A GO:0006508 ... Q9BYF1 38467833
    899540 8wdr:C (3.47) BS01 ZN N/A GO:0006508 ... Q9BYF1 38467833
    899541 8wds:A (3.4) BS01 ZN N/A GO:0006508 ... Q9BYF1 38467833
    899542 8wds:C (3.4) BS01 ZN N/A GO:0006508 ... Q9BYF1 38467833
    899543 8wdt:A (3.34) BS01 WCH ? GO:0001609 ... P29274 38171234
    899544 8wdu:0 (2.24) BS01 BCL ? GO:0005886 ... D3RP75 38347078
    899545 8wdu:0 (2.24) BS02 BCL ? GO:0005886 ... D3RP75 38347078
    899546 8wdu:0 (2.24) BS03 CRT ? GO:0005886 ... D3RP75 38347078
    899547 8wdu:1 (2.24) BS01 CRT ? GO:0005886 ... D3RP69 38347078
    899548 8wdu:1 (2.24) BS02 BCL ? GO:0005886 ... D3RP69 38347078
    899549 8wdu:1 (2.24) BS03 BCL ? GO:0005886 ... D3RP69 38347078
    899550 8wdu:1 (2.24) BS04 CRT ? GO:0005886 ... D3RP69 38347078
    899551 8wdu:2 (2.24) BS01 BCL ? GO:0005886 ... D3RP75 38347078
    899552 8wdu:2 (2.24) BS02 BCL ? GO:0005886 ... D3RP75 38347078
    899553 8wdu:2 (2.24) BS03 CRT ? GO:0005886 ... D3RP75 38347078
    899554 8wdu:3 (2.24) BS01 Z41 ? GO:0005886 ... D3RP67 38347078
    899555 8wdu:3 (2.24) BS02 CRT ? GO:0005886 ... D3RP67 38347078
    899556 8wdu:3 (2.24) BS03 BCL ? GO:0005886 ... D3RP67 38347078
    899557 8wdu:3 (2.24) BS04 BCL ? GO:0005886 ... D3RP67 38347078
    899558 8wdu:3 (2.24) BS05 CRT ? GO:0005886 ... D3RP67 38347078
    899559 8wdu:3 (2.24) BS06 BCL ? GO:0005886 ... D3RP67 38347078
    899560 8wdu:3 (2.24) BS07 CRT ? GO:0005886 ... D3RP67 38347078
    899561 8wdu:4 (2.24) BS01 BCL ? GO:0005886 ... D3RP75 38347078
    899562 8wdu:4 (2.24) BS02 BCL ? GO:0005886 ... D3RP75 38347078
    899563 8wdu:4 (2.24) BS03 CRT ? GO:0005886 ... D3RP75 38347078
    899564 8wdu:5 (2.24) BS01 CRT ? GO:0005886 ... D3RP69 38347078
    899565 8wdu:5 (2.24) BS02 BCL ? GO:0005886 ... D3RP69 38347078
    899566 8wdu:5 (2.24) BS03 BCL ? GO:0005886 ... D3RP69 38347078
    899567 8wdu:5 (2.24) BS04 CRT ? GO:0005886 ... D3RP69 38347078
    899568 8wdu:5 (2.24) BS05 CRT ? GO:0005886 ... D3RP69 38347078
    899569 8wdu:6 (2.24) BS01 BCL ? GO:0005886 ... D3RP75 38347078
    899570 8wdu:6 (2.24) BS02 BCL ? GO:0005886 ... D3RP75 38347078
    899571 8wdu:6 (2.24) BS03 CRT ? GO:0005886 ... D3RP75 38347078
    899572 8wdu:7 (2.24) BS01 UQ8 ? GO:0005886 ... D3RP69 38347078
    899573 8wdu:7 (2.24) BS02 CRT ? GO:0005886 ... D3RP69 38347078
    899574 8wdu:7 (2.24) BS03 BCL ? GO:0005886 ... D3RP69 38347078
    899575 8wdu:7 (2.24) BS04 BCL ? GO:0005886 ... D3RP69 38347078
    899576 8wdu:7 (2.24) BS05 CRT ? GO:0005886 ... D3RP69 38347078
    899577 8wdu:7 (2.24) BS06 BCL ? GO:0005886 ... D3RP69 38347078
    899578 8wdu:7 (2.24) BS07 CRT ? GO:0005886 ... D3RP69 38347078
    899579 8wdu:8 (2.24) BS01 BCL ? GO:0005886 ... D3RP75 38347078
    899580 8wdu:8 (2.24) BS02 BCL ? GO:0005886 ... D3RP75 38347078
    899581 8wdu:8 (2.24) BS03 CRT ? GO:0005886 ... D3RP75 38347078
    899582 8wdu:9 (2.24) BS01 UQ8 ? GO:0005886 ... D3RP69 38347078
    899583 8wdu:9 (2.24) BS02 CRT ? GO:0005886 ... D3RP69 38347078
    899584 8wdu:9 (2.24) BS03 CRT ? GO:0005886 ... D3RP69 38347078
    899585 8wdu:9 (2.24) BS04 BCL ? GO:0005886 ... D3RP69 38347078
    899586 8wdu:9 (2.24) BS05 BCL ? GO:0005886 ... D3RP69 38347078
    899587 8wdu:A (2.24) BS01 BCL ? GO:0005886 ... D3RP69 38347078
    899588 8wdu:A (2.24) BS02 BCL ? GO:0005886 ... D3RP69 38347078
    899589 8wdu:A (2.24) BS03 CRT ? GO:0005886 ... D3RP69 38347078
    899590 8wdu:A (2.24) BS04 CRT ? GO:0005886 ... D3RP69 38347078
    899591 8wdu:A (2.24) BS05 CRT ? GO:0005886 ... D3RP69 38347078
    899592 8wdu:B (2.24) BS01 BCL ? GO:0005886 ... D3RP75 38347078
    899593 8wdu:B (2.24) BS02 BCL ? GO:0005886 ... D3RP75 38347078
    899594 8wdu:B (2.24) BS03 CRT ? GO:0005886 ... D3RP75 38347078
    899595 8wdu:C (2.24) BS01 HEM ? GO:0005506 ... O82947 38347078
    899596 8wdu:C (2.24) BS02 HEM ? GO:0005506 ... O82947 38347078
    899597 8wdu:C (2.24) BS03 HEM ? GO:0005506 ... O82947 38347078
    899598 8wdu:C (2.24) BS04 HEM ? GO:0005506 ... O82947 38347078
    899599 8wdu:C (2.24) BS05 MG ? GO:0005506 ... O82947 38347078
    899600 8wdu:C (2.24) BS06 Z41 ? GO:0005506 ... O82947 38347078

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).