SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    900201 8vhr:A (3.55) BS04 DTP N/A GO:0004748 ... P00452 39164005
    900202 8vhr:B (3.55) BS01 DTP N/A GO:0004748 ... P00452 39164005
    900203 8vhr:B (3.55) BS02 DTP N/A GO:0004748 ... P00452 39164005
    900204 8vhr:B (3.55) BS03 GTP N/A GO:0004748 ... P00452 39164005
    900205 8vhr:B (3.55) BS04 DTP N/A GO:0004748 ... P00452 39164005
    900206 8vhr:C (3.55) BS01 DTP N/A GO:0004748 ... P00452 39164005
    900207 8vhr:C (3.55) BS02 GTP N/A GO:0004748 ... P00452 39164005
    900208 8vhr:C (3.55) BS03 DTP N/A GO:0004748 ... P00452 39164005
    900209 8vhr:D (3.55) BS01 DTP N/A GO:0004748 ... P00452 39164005
    900210 8vhr:D (3.55) BS02 DTP N/A GO:0004748 ... P00452 39164005
    900211 8vhr:D (3.55) BS03 GTP N/A GO:0004748 ... P00452 39164005
    900212 8vhr:D (3.55) BS04 DTP N/A GO:0004748 ... P00452 39164005
    900213 8vht:A (3.2) BS01 BGC N/A GO:0005886 ... I1LVD2 40365874
    900214 8vht:A (3.2) BS02 BGC N/A GO:0005886 ... I1LVD2 40365874
    900215 8vht:B (3.2) BS01 BGC N/A GO:0005886 ... I1LVD2 40365874
    900216 8vht:D (3.2) BS01 BGC N/A GO:0005886 ... I1LVD2 40365874
    900217 8vht:D (3.2) BS02 BGC N/A GO:0005886 ... I1LVD2 40365874
    900218 8vhu:A (2.1) BS01 DTP N/A GO:0004748 ... P00452
    P69924
    39164005
    900219 8vhu:A (2.1) BS02 DTP N/A GO:0004748 ... P00452
    P69924
    39164005
    900220 8vhu:A (2.1) BS03 DTP N/A GO:0004748 ... P00452
    P69924
    39164005
    900221 8vhu:B (2.1) BS01 DTP N/A GO:0004748 ... P00452
    P69924
    39164005
    900222 8vhu:B (2.1) BS02 DTP N/A GO:0004748 ... P00452
    P69924
    39164005
    900223 8vhw:A (2.3) BS01 MN N/A GO:0000303 ... P04179 39013847
    900224 8vhw:B (2.3) BS01 MN N/A GO:0000303 ... P04179 39013847
    900225 8vhy:A (2.3) BS01 MN N/A GO:0000303 ... P04179 39013847
    900226 8vhy:B (2.3) BS01 MN N/A GO:0000303 ... P04179 39013847
    900227 8vi0:A (3.0) BS01 BGC N/A GO:0005886 ... I1JDD7 40365874
    900228 8vi0:B (3.0) BS01 BGC N/A GO:0005886 ... I1JDD7 40365874
    900229 8vi0:B (3.0) BS02 BGC N/A GO:0005886 ... I1JDD7 40365874
    900230 8vi0:D (3.0) BS01 BGC N/A GO:0005886 ... I1JDD7 40365874
    900231 8vi0:D (3.0) BS02 BGC N/A GO:0005886 ... I1JDD7 40365874
    900232 8vi1:A (3.11) BS01 A1AB1 N/A GO:0004672 ... P08581 40459881
    900233 8vi1:B (3.11) BS01 A1AB1 N/A GO:0004672 ... P08581 40459881
    900234 8vi8:A (3.21) BS01 X5Z N/A GO:0015276 ... C3THM2 39088332
    900235 8vi8:A (3.21) BS02 X5Z N/A GO:0015276 ... C3THM2 39088332
    900236 8vi8:B (3.21) BS01 X5Z N/A GO:0015276 ... C3THM2 39088332
    900237 8vi8:C (3.21) BS01 X5Z N/A GO:0015276 ... C3THM2 39088332
    900238 8vi8:D (3.21) BS01 X5Z N/A GO:0015276 ... C3THM2 39088332
    900239 8vi8:E (3.21) BS01 X5Z N/A GO:0015276 ... C3THM2 39088332
    900240 8vi8:F (3.21) BS01 X5Z N/A GO:0015276 ... C3THM2 39088332
    900241 8vic:A (3.48) BS01 A1AA3 N/A GO:0005267 ... Q9BSA9 39116214
    900242 8vie:A (3.52) BS01 A1AB0 N/A GO:0005267 ... Q9BSA9 39116214
    900243 8vig:A (1.6) BS01 FE N/A GO:0120147 ... A0ACD6B9V8 39216472
    900244 8vig:A (1.6) BS02 AVJ N/A GO:0120147 ... A0ACD6B9V8 39216472
    900245 8vih:A (1.55) BS01 FE N/A GO:0120147 ... B1WTS6 39216472
    900246 8vih:A (1.55) BS02 AVJ N/A GO:0120147 ... B1WTS6 39216472
    900247 8vih:B (1.55) BS01 FE N/A GO:0120147 ... B1WTS6 39216472
    900248 8vih:B (1.55) BS02 AVJ N/A GO:0120147 ... B1WTS6 39216472
    900249 8vii:A (1.621) BS01 MN N/A GO:0120147 ... B1WTS6 39216472
    900250 8vii:A (1.621) BS02 AVJ N/A GO:0120147 ... B1WTS6 39216472
    900251 8vii:A (1.621) BS03 CYS N/A GO:0120147 ... B1WTS6 39216472
    900252 8vii:B (1.621) BS01 MN N/A GO:0120147 ... B1WTS6 39216472
    900253 8vii:B (1.621) BS02 AVJ N/A GO:0120147 ... B1WTS6 39216472
    900254 8vii:B (1.621) BS03 CYS N/A GO:0120147 ... B1WTS6 39216472
    900255 8vij:A (1.35) BS01 HEM ? GO:0015671 ... A9DF82 39864624
    900256 8vij:B (1.35) BS01 HEM ? GO:0015671 ... A9DF82 39864624
    900257 8vij:C (1.35) BS01 HEM ? GO:0015671 ... A9DF82 39864624
    900258 8vij:D (1.35) BS01 HEM ? GO:0015671 ... A9DF82 39864624
    900259 8vik:A (1.961) BS01 FE N/A GO:0120147 ... B1WTS6 39216472
    900260 8vik:B (1.961) BS01 FE N/A GO:0120147 ... B1WTS6 39216472
    900261 8vil:A (1.95) BS01 FE N/A GO:0120147 ... B1WTS6 39216472
    900262 8vil:A (1.95) BS02 AVI N/A GO:0120147 ... B1WTS6 39216472
    900263 8vil:B (1.95) BS01 FE N/A GO:0120147 ... B1WTS6 39216472
    900264 8vio:1 (3.26) BS01 rna N/A N/A A0QR10 39913204
    900265 8vio:1 (3.26) BS02 rna N/A N/A A0QR10 39913204
    900266 8vio:2 (3.26) BS01 rna N/A GO:0003735 ... A0QSG7 39913204
    900267 8vio:2 (3.26) BS02 rna N/A GO:0003735 ... A0QSG7 39913204
    900268 8vio:4 (3.26) BS01 rna N/A GO:0003924 ... A0QVY1 39913204
    900269 8vio:C (3.26) BS01 rna N/A GO:0002181 ... A0QSD4 39913204
    900270 8vio:D (3.26) BS01 rna N/A GO:0003735 ... A0QSD1 39913204
    900271 8vio:E (3.26) BS01 rna N/A GO:0003735 ... A0QSD2 39913204
    900272 8vio:F (3.26) BS01 rna N/A GO:0000049 ... A0QSG1 39913204
    900273 8vio:F (3.26) BS02 rna N/A GO:0000049 ... A0QSG1 39913204
    900274 8vio:G (3.26) BS01 rna N/A GO:0002181 ... A0QSG4 39913204
    900275 8vio:H (3.26) BS01 rna N/A GO:0003735 ... A0R7F6 39913204
    900276 8vio:I (3.26) BS01 rna N/A GO:0003735 ... A0QS62 39913204
    900277 8vio:J (3.26) BS01 rna N/A GO:0003735 ... A0QS45 39913204
    900278 8vio:K (3.26) BS01 rna N/A GO:0003729 ... A0QSP8 39913204
    900279 8vio:L (3.26) BS01 rna N/A GO:0003735 ... A0QSF9 39913204
    900280 8vio:L (3.26) BS02 rna N/A GO:0003735 ... A0QSF9 39913204
    900281 8vio:M (3.26) BS01 rna N/A GO:0003735 ... A0QSG8 39913204
    900282 8vio:N (3.26) BS01 rna N/A GO:0003735 ... A0QSD8 39913204
    900283 8vio:O (3.26) BS01 rna N/A GO:0003735 ... A0QSL9 39913204
    900284 8vio:P (3.26) BS01 rna N/A GO:0003735 ... A0QSG5 39913204
    900285 8vio:P (3.26) BS02 rna N/A GO:0003735 ... A0QSG5 39913204
    900286 8vio:Q (3.26) BS01 rna N/A GO:0003735 ... A0QV42 39913204
    900287 8vio:Q (3.26) BS02 rna N/A GO:0003735 ... A0QV42 39913204
    900288 8vio:R (3.26) BS01 rna N/A GO:0000027 ... A0QYU6 39913204
    900289 8vio:S (3.26) BS01 rna N/A GO:0003723 ... A0R151 39913204
    900290 8vio:T (3.26) BS01 rna N/A GO:0003735 ... A0QSD6 39913204
    900291 8vio:U (3.26) BS01 rna N/A GO:0003735 ... A0QSD3 39913204
    900292 8vio:V (3.26) BS01 rna N/A GO:0003723 ... A0QSG0 39913204
    900293 8vio:W (3.26) BS01 rna N/A GO:0003723 ... A0R3D2 39913204
    900294 8vio:W (3.26) BS02 rna N/A GO:0003723 ... A0R3D2 39913204
    900295 8vio:X (3.26) BS01 rna N/A GO:0003735 ... A0R150 39913204
    900296 8vio:Y (3.26) BS01 rna N/A GO:0003735 ... A0QV03 39913204
    900297 8vio:Z (3.26) BS01 rna N/A GO:0003735 ... A0QSD9 39913204
    900298 8vio:b (3.26) BS01 rna N/A GO:0003735 ... A0R3I9 39913204
    900299 8vio:c (3.26) BS01 rna N/A GO:0003735 ... A0QS39 39913204
    900300 8vio:d (3.26) BS01 rna N/A GO:0003735 ... A0R7K0 39913204
    900301 8vio:e (3.26) BS01 rna N/A GO:0003735 ... A0QYU7 39913204
    900302 8vio:f (3.26) BS01 rna N/A GO:0003735 ... A0QSL4 39913204
    900303 8vio:g (3.26) BS01 rna N/A GO:0003735 ... A0R215 39913204
    900304 8vio:h (3.26) BS01 rna N/A GO:0003735 ... A0QVB8 39913204
    900305 8vio:i (3.26) BS01 rna N/A GO:0003676 ... A0QSD7 39913204
    900306 8vio:j (3.26) BS01 rna N/A GO:0003723 ... A0QSL7 39913204
    900307 8vio:k (3.26) BS01 rna N/A GO:0003723 ... A0QSG6 39913204
    900308 8vio:l (3.26) BS01 rna N/A GO:0003735 ... A0A2U9Q0X2 39913204
    900309 8vio:m (3.26) BS01 rna N/A GO:0000049 ... A0QS97 39913204
    900310 8vio:n (3.26) BS01 rna N/A GO:0003735 ... A0QSG3 39913204
    900311 8vio:o (3.26) BS01 rna N/A GO:0003723 ... A0QSP9 39913204
    900312 8vio:o (3.26) BS02 rna N/A GO:0003723 ... A0QSP9 39913204
    900313 8vio:p (3.26) BS01 rna N/A GO:0000049 ... A0QSD0 39913204
    900314 8vio:q (3.26) BS01 rna N/A GO:0003735 ... A0QSL6 39913204
    900315 8vio:r (3.26) BS01 rna N/A GO:0003735 ... A0R7F7 39913204
    900316 8vio:s (3.26) BS01 rna N/A GO:0000049 ... A0QS96 39913204
    900317 8vio:t (3.26) BS01 rna N/A GO:0000049 ... A0QSL5 39913204
    900318 8vio:u (3.26) BS01 rna N/A GO:0003735 ... A0QSG2 39913204
    900319 8vio:v (3.26) BS01 rna N/A GO:0003735 ... A0QVQ3 39913204
    900320 8vio:v (3.26) BS02 rna N/A GO:0003735 ... A0QVQ3 39913204
    900321 8vio:w (3.26) BS01 rna N/A GO:0003735 ... A0QV37 39913204
    900322 8vio:x (3.26) BS01 rna N/A GO:0003735 ... A0QSE0 39913204
    900323 8vio:y (3.26) BS01 rna N/A GO:0000028 ... A0QSD5 39913204
    900324 8vio:z (3.26) BS01 rna N/A GO:0003723 ... A0R102 39913204
    900325 8vip:A (1.77) BS01 ANP N/A GO:0004371 ... Q2FZ58 39454961
    900326 8vip:A (1.77) BS02 MN N/A GO:0004371 ... Q2FZ58 39454961
    900327 8vip:A (1.77) BS03 MN N/A GO:0004371 ... Q2FZ58 39454961
    900328 8viq:A (1.1) BS01 ANP N/A GO:0004371 ... Q2FZ58 39454961
    900329 8viq:A (1.1) BS02 MG N/A GO:0004371 ... Q2FZ58 39454961
    900330 8viq:A (1.1) BS03 MG N/A GO:0004371 ... Q2FZ58 39454961
    900331 8vis:B (1.59) BS01 peptide 3.4.21.- GO:0004252 ... O60235 40348740
    900332 8vis:D (1.59) BS01 peptide 3.4.21.- GO:0004252 ... O60235 40348740
    900333 8vis:D (1.59) BS02 peptide 3.4.21.- GO:0004252 ... O60235 40348740
    900334 8vis:F (1.59) BS01 peptide 3.4.21.- GO:0004252 ... O60235 40348740
    900335 8vis:H (1.59) BS01 peptide 3.4.21.- GO:0004252 ... O60235 40348740
    900336 8vis:H (1.59) BS02 peptide 3.4.21.- GO:0004252 ... O60235 40348740
    900337 8vit:A (1.25) BS01 ADP N/A GO:0004371 ... Q2FZ58 39454961
    900338 8vit:A (1.25) BS02 MG N/A GO:0004371 ... Q2FZ58 39454961
    900339 8vit:A (1.25) BS03 MG N/A GO:0004371 ... Q2FZ58 39454961
    900340 8viv:A (2.2) BS01 rna N/A GO:0003723 ... Q09312 39747099
    900341 8viw:A (3.3) BS01 BDP N/A N/A Q5SGE1 39990868
    900342 8viw:A (3.3) BS02 GNS N/A N/A Q5SGE1 39990868
    900343 8viw:A (3.3) BS03 BDP N/A N/A Q5SGE1 39990868
    900344 8viw:A (3.3) BS04 GNS N/A N/A Q5SGE1 39990868
    900345 8viw:A (3.3) BS05 UDP N/A N/A Q5SGE1 39990868
    900346 8viw:A (3.3) BS06 MN N/A N/A Q5SGE1 39990868
    900347 8viw:A (3.3) BS07 UDP N/A N/A Q5SGE1 39990868
    900348 8viw:B (3.3) BS01 GNS N/A N/A Q5SGE1 39990868
    900349 8viw:B (3.3) BS02 BDP N/A N/A Q5SGE1 39990868
    900350 8viw:B (3.3) BS03 GNS N/A N/A Q5SGE1 39990868
    900351 8viw:B (3.3) BS04 BDP N/A N/A Q5SGE1 39990868
    900352 8viw:B (3.3) BS05 UDP N/A N/A Q5SGE1 39990868
    900353 8viw:B (3.3) BS06 MN N/A N/A Q5SGE1 39990868
    900354 8viw:B (3.3) BS07 UDP N/A N/A Q5SGE1 39990868
    900355 8viw:C (3.3) BS01 BDP N/A N/A Q5SGE1 39990868
    900356 8viw:C (3.3) BS02 GNS N/A N/A Q5SGE1 39990868
    900357 8viw:C (3.3) BS03 BDP N/A N/A Q5SGE1 39990868
    900358 8viw:C (3.3) BS04 GNS N/A N/A Q5SGE1 39990868
    900359 8viw:C (3.3) BS05 UDP N/A N/A Q5SGE1 39990868
    900360 8viw:C (3.3) BS06 MN N/A N/A Q5SGE1 39990868
    900361 8viw:C (3.3) BS07 UDP N/A N/A Q5SGE1 39990868
    900362 8viw:D (3.3) BS01 GNS N/A N/A Q5SGE1 39990868
    900363 8viw:D (3.3) BS02 BDP N/A N/A Q5SGE1 39990868
    900364 8viw:D (3.3) BS03 GNS N/A N/A Q5SGE1 39990868
    900365 8viw:D (3.3) BS04 BDP N/A N/A Q5SGE1 39990868
    900366 8viw:D (3.3) BS05 UDP N/A N/A Q5SGE1 39990868
    900367 8viw:D (3.3) BS06 MN N/A N/A Q5SGE1 39990868
    900368 8viw:D (3.3) BS07 UDP N/A N/A Q5SGE1 39990868
    900369 8vix:A (2.31) BS01 CA N/A GO:0004601 ... O81959 N/A
    900370 8vix:B (2.31) BS01 CA N/A GO:0004601 ... O81959 N/A
    900371 8viy:A (2.34) BS01 FE2 N/A GO:0005506 ... O15296 38601784
    900372 8viy:A (2.34) BS02 C8E N/A GO:0005506 ... O15296 38601784
    900373 8viy:A (2.34) BS03 C8E N/A GO:0005506 ... O15296 38601784
    900374 8viy:A (2.34) BS04 CA N/A GO:0005506 ... O15296 38601784
    900375 8viy:A (2.34) BS05 CA N/A GO:0005506 ... O15296 38601784
    900376 8viz:A (2.63) BS01 ADP N/A GO:0000287 ... P68135 39448849
    900377 8viz:B (2.63) BS01 ADP N/A GO:0000287 ... P68135 39448849
    900378 8viz:C (2.63) BS01 ADP N/A GO:0000287 ... P68135 39448849
    900379 8viz:D (2.63) BS01 ADP N/A GO:0000287 ... P68135 39448849
    900380 8viz:E (2.63) BS01 ADP N/A GO:0000287 ... P68135 39448849
    900381 8viz:F (2.63) BS01 ATP N/A GO:0000287 ... P68135 39448849
    900382 8viz:G (2.63) BS01 CA N/A GO:0003779 ... P06396 39448849
    900383 8viz:G (2.63) BS02 CA N/A GO:0003779 ... P06396 39448849
    900384 8viz:G (2.63) BS03 CA N/A GO:0003779 ... P06396 39448849
    900385 8viz:G (2.63) BS04 CA N/A GO:0003779 ... P06396 39448849
    900386 8viz:G (2.63) BS05 CA N/A GO:0003779 ... P06396 39448849
    900387 8viz:G (2.63) BS06 CA N/A GO:0003779 ... P06396 39448849
    900388 8viz:G (2.63) BS07 CA N/A GO:0003779 ... P06396 39448849
    900389 8viz:G (2.63) BS08 CA N/A GO:0003779 ... P06396 39448849
    900390 8vj0:A (2.3) BS01 MN N/A GO:0000303 ... P04179 39013847
    900391 8vj0:B (2.3) BS01 MN N/A GO:0000303 ... P04179 39013847
    900392 8vj3:A (1.9) BS01 FAD 1.2.1.8 GO:0006578 ... A0A0H3FPU4 N/A
    900393 8vj3:B (1.9) BS01 FAD 1.2.1.8 GO:0006578 ... A0A0H3FPU4 N/A
    900394 8vj3:C (1.9) BS01 FAD 1.2.1.8 GO:0006578 ... A0A0H3FPU4 N/A
    900395 8vj3:D (1.9) BS01 FAD 1.2.1.8 GO:0006578 ... A0A0H3FPU4 N/A
    900396 8vj4:A (1.68) BS01 MN N/A GO:0000303 ... P04179 39013847
    900397 8vj4:B (1.68) BS01 MN N/A GO:0000303 ... P04179 39013847
    900398 8vj5:A (1.76) BS01 MN N/A GO:0000303 ... P04179 39013847
    900399 8vj5:B (1.76) BS01 MN N/A GO:0000303 ... P04179 39013847
    900400 8vj6:A (3.5) BS01 A1AB5 ? GO:0000149 ... P19491 38834914

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).