SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    900401 8wgh:B (2.4) BS05 CLA N/A GO:0000287 ... G9IB61 39060282
    900402 8wgh:B (2.4) BS06 CLA N/A GO:0000287 ... G9IB61 39060282
    900403 8wgh:B (2.4) BS07 SF4 N/A GO:0000287 ... G9IB61 39060282
    900404 8wgh:B (2.4) BS08 CLA N/A GO:0000287 ... G9IB61 39060282
    900405 8wgh:B (2.4) BS09 CLA N/A GO:0000287 ... G9IB61 39060282
    900406 8wgh:B (2.4) BS10 CLA N/A GO:0000287 ... G9IB61 39060282
    900407 8wgh:B (2.4) BS11 CLA N/A GO:0000287 ... G9IB61 39060282
    900408 8wgh:B (2.4) BS12 CLA N/A GO:0000287 ... G9IB61 39060282
    900409 8wgh:B (2.4) BS13 CLA N/A GO:0000287 ... G9IB61 39060282
    900410 8wgh:B (2.4) BS14 CLA N/A GO:0000287 ... G9IB61 39060282
    900411 8wgh:B (2.4) BS15 CLA N/A GO:0000287 ... G9IB61 39060282
    900412 8wgh:B (2.4) BS16 CLA N/A GO:0000287 ... G9IB61 39060282
    900413 8wgh:B (2.4) BS17 CLA N/A GO:0000287 ... G9IB61 39060282
    900414 8wgh:B (2.4) BS18 CLA N/A GO:0000287 ... G9IB61 39060282
    900415 8wgh:B (2.4) BS19 CLA N/A GO:0000287 ... G9IB61 39060282
    900416 8wgh:B (2.4) BS20 CLA N/A GO:0000287 ... G9IB61 39060282
    900417 8wgh:B (2.4) BS21 CLA N/A GO:0000287 ... G9IB61 39060282
    900418 8wgh:B (2.4) BS22 CLA N/A GO:0000287 ... G9IB61 39060282
    900419 8wgh:B (2.4) BS23 CLA N/A GO:0000287 ... G9IB61 39060282
    900420 8wgh:B (2.4) BS24 CLA N/A GO:0000287 ... G9IB61 39060282
    900421 8wgh:B (2.4) BS25 CLA N/A GO:0000287 ... G9IB61 39060282
    900422 8wgh:B (2.4) BS26 CLA N/A GO:0000287 ... G9IB61 39060282
    900423 8wgh:B (2.4) BS27 CLA N/A GO:0000287 ... G9IB61 39060282
    900424 8wgh:B (2.4) BS28 CLA N/A GO:0000287 ... G9IB61 39060282
    900425 8wgh:B (2.4) BS29 CLA N/A GO:0000287 ... G9IB61 39060282
    900426 8wgh:B (2.4) BS30 CLA N/A GO:0000287 ... G9IB61 39060282
    900427 8wgh:B (2.4) BS31 CLA N/A GO:0000287 ... G9IB61 39060282
    900428 8wgh:B (2.4) BS32 CLA N/A GO:0000287 ... G9IB61 39060282
    900429 8wgh:B (2.4) BS33 CLA N/A GO:0000287 ... G9IB61 39060282
    900430 8wgh:B (2.4) BS34 CLA N/A GO:0000287 ... G9IB61 39060282
    900431 8wgh:B (2.4) BS35 CLA N/A GO:0000287 ... G9IB61 39060282
    900432 8wgh:B (2.4) BS36 CLA N/A GO:0000287 ... G9IB61 39060282
    900433 8wgh:B (2.4) BS37 CLA N/A GO:0000287 ... G9IB61 39060282
    900434 8wgh:B (2.4) BS38 CLA N/A GO:0000287 ... G9IB61 39060282
    900435 8wgh:B (2.4) BS39 CLA N/A GO:0000287 ... G9IB61 39060282
    900436 8wgh:B (2.4) BS40 CLA N/A GO:0000287 ... G9IB61 39060282
    900437 8wgh:B (2.4) BS41 CLA N/A GO:0000287 ... G9IB61 39060282
    900438 8wgh:B (2.4) BS42 CLA N/A GO:0000287 ... G9IB61 39060282
    900439 8wgh:B (2.4) BS43 CLA N/A GO:0000287 ... G9IB61 39060282
    900440 8wgh:B (2.4) BS44 CLA N/A GO:0000287 ... G9IB61 39060282
    900441 8wgh:B (2.4) BS45 CLA N/A GO:0000287 ... G9IB61 39060282
    900442 8wgh:B (2.4) BS46 CLA N/A GO:0000287 ... G9IB61 39060282
    900443 8wgh:B (2.4) BS47 PQN N/A GO:0000287 ... G9IB61 39060282
    900444 8wgh:B (2.4) BS48 CLA N/A GO:0000287 ... G9IB61 39060282
    900445 8wgh:C (2.4) BS01 SF4 N/A GO:0009055 ... A4QJG7 39060282
    900446 8wgh:C (2.4) BS02 SF4 N/A GO:0009055 ... A4QJG7 39060282
    900447 8wgh:F (2.4) BS01 CLA N/A GO:0003729 ... Q9SHE8 39060282
    900448 8wgh:F (2.4) BS02 CLA N/A GO:0003729 ... Q9SHE8 39060282
    900449 8wgh:F (2.4) BS03 CLA N/A GO:0003729 ... Q9SHE8 39060282
    900450 8wgh:F (2.4) BS04 CLA N/A GO:0003729 ... Q9SHE8 39060282
    900451 8wgh:F (2.4) BS05 CLA N/A GO:0003729 ... Q9SHE8 39060282
    900452 8wgh:F (2.4) BS06 CLA N/A GO:0003729 ... Q9SHE8 39060282
    900453 8wgh:F (2.4) BS07 CLA N/A GO:0003729 ... Q9SHE8 39060282
    900454 8wgh:F (2.4) BS08 CLA N/A GO:0003729 ... Q9SHE8 39060282
    900455 8wgh:G (2.4) BS01 CLA N/A N/A N/A 39060282
    900456 8wgh:G (2.4) BS02 CLA N/A N/A N/A 39060282
    900457 8wgh:G (2.4) BS03 CLA N/A N/A N/A 39060282
    900458 8wgh:G (2.4) BS04 CLA N/A N/A N/A 39060282
    900459 8wgh:G (2.4) BS05 CLA N/A N/A N/A 39060282
    900460 8wgh:H (2.4) BS01 peptide N/A N/A N/A 39060282
    900461 8wgh:H (2.4) BS02 CLA N/A N/A N/A 39060282
    900462 8wgh:H (2.4) BS03 CLA N/A N/A N/A 39060282
    900463 8wgh:H (2.4) BS04 CLA N/A N/A N/A 39060282
    900464 8wgh:J (2.4) BS01 CLA N/A GO:0009507 ... Q3C1K9 39060282
    900465 8wgh:J (2.4) BS02 CLA N/A GO:0009507 ... Q3C1K9 39060282
    900466 8wgh:J (2.4) BS03 CLA N/A GO:0009507 ... Q3C1K9 39060282
    900467 8wgh:J (2.4) BS04 CLA N/A GO:0009507 ... Q3C1K9 39060282
    900468 8wgh:J (2.4) BS05 CLA N/A GO:0009507 ... Q3C1K9 39060282
    900469 8wgh:K (2.4) BS01 CLA N/A N/A N/A 39060282
    900470 8wgh:K (2.4) BS02 CLA N/A N/A N/A 39060282
    900471 8wgh:K (2.4) BS03 CLA N/A N/A N/A 39060282
    900472 8wgh:K (2.4) BS04 CLA N/A N/A N/A 39060282
    900473 8wgh:K (2.4) BS05 CLA N/A N/A N/A 39060282
    900474 8wgh:L (2.4) BS01 peptide N/A N/A N/A 39060282
    900475 8wgh:L (2.4) BS02 CLA N/A N/A N/A 39060282
    900476 8wgh:L (2.4) BS03 CLA N/A N/A N/A 39060282
    900477 8wgh:L (2.4) BS04 CLA N/A N/A N/A 39060282
    900478 8wgh:L (2.4) BS05 CLA N/A N/A N/A 39060282
    900479 8wgh:L (2.4) BS06 CLA N/A N/A N/A 39060282
    900480 8wgh:L (2.4) BS07 CLA N/A N/A N/A 39060282
    900481 8wgh:L (2.4) BS08 CLA N/A N/A N/A 39060282
    900482 8wgh:L (2.4) BS09 CLA N/A N/A N/A 39060282
    900483 8wgh:N (2.4) BS01 CLA N/A N/A N/A 39060282
    900484 8wgh:O (2.4) BS01 CLA N/A N/A N/A 39060282
    900485 8wgh:O (2.4) BS02 CLA N/A N/A N/A 39060282
    900486 8wgh:O (2.4) BS03 CLA N/A N/A N/A 39060282
    900487 8wgh:O (2.4) BS04 CLA N/A N/A N/A 39060282
    900488 8wgh:O (2.4) BS05 CLA N/A N/A N/A 39060282
    900489 8wgm:A (2.15) BS01 NDP N/A GO:0004146 ... P13922 39250850
    900490 8wgm:A (2.15) BS02 UMP N/A GO:0004146 ... P13922 39250850
    900491 8wgm:A (2.15) BS03 WCQ N/A GO:0004146 ... P13922 39250850
    900492 8wgm:A (2.15) BS04 UMP N/A GO:0004146 ... P13922 39250850
    900493 8wgm:B (2.15) BS01 UMP N/A GO:0004146 ... P13922 39250850
    900494 8wgm:B (2.15) BS02 NDP N/A GO:0004146 ... P13922 39250850
    900495 8wgm:B (2.15) BS03 UMP N/A GO:0004146 ... P13922 39250850
    900496 8wgm:B (2.15) BS04 WCQ N/A GO:0004146 ... P13922 39250850
    900497 8wgn:A (2.0) BS01 NDP N/A GO:0000900 ... P00374 39250850
    900498 8wgn:A (2.0) BS02 WCQ N/A GO:0000900 ... P00374 39250850
    900499 8wgo:A (3.7) BS01 peptide N/A GO:0004672 ... A0A0H2ZMF7 39154050
    900500 8wgo:A (3.7) BS02 GSP N/A GO:0004672 ... A0A0H2ZMF7 39154050
    900501 8wgo:A (3.7) BS03 PO4 N/A GO:0004672 ... A0A0H2ZMF7 39154050
    900502 8wgo:B (3.7) BS01 PO4 N/A GO:0004672 ... A0A0H2ZMF7 39154050
    900503 8wgr:A (2.75) BS01 DSM N/A GO:0003779 ... P23975 39048818
    900504 8wgr:A (2.75) BS02 DSM N/A GO:0003779 ... P23975 39048818
    900505 8wgr:A (2.75) BS03 K N/A GO:0003779 ... P23975 39048818
    900506 8wgs:A (1.801) BS01 WGH ? N/A P02766 38670538
    900507 8wgs:B (1.801) BS01 WGH ? N/A P02766 38670538
    900508 8wgt:A (1.696) BS01 WGJ ? N/A P02766 38670538
    900509 8wgt:B (1.696) BS01 WGJ ? N/A P02766 38670538
    900510 8wgu:A (1.508) BS01 WH0 ? N/A P02766 38670538
    900511 8wgu:B (1.508) BS01 WH0 ? N/A P02766 38670538
    900512 8wgx:A (3.47) BS01 LNR N/A GO:0003779 ... P23975 39048818
    900513 8wgx:A (3.47) BS02 LNR N/A GO:0003779 ... P23975 39048818
    900514 8wgy:A (2.91) BS01 dna N/A GO:0004386 ... A0A7H0DN89 39167653
    900515 8wgy:A (2.91) BS02 ANP N/A GO:0004386 ... A0A7H0DN89 39167653
    900516 8wgy:B (2.91) BS01 dna N/A GO:0004386 ... A0A7H0DN89 39167653
    900517 8wgy:B (2.91) BS02 ANP N/A GO:0004386 ... A0A7H0DN89 39167653
    900518 8wgy:C (2.91) BS01 dna N/A GO:0004386 ... A0A7H0DN89 39167653
    900519 8wgy:C (2.91) BS02 ANP N/A GO:0004386 ... A0A7H0DN89 39167653
    900520 8wgy:C (2.91) BS03 ANP N/A GO:0004386 ... A0A7H0DN89 39167653
    900521 8wgy:D (2.91) BS01 ZN N/A GO:0004386 ... A0A7H0DN89 39167653
    900522 8wgy:E (2.91) BS01 ANP N/A GO:0004386 ... A0A7H0DN89 39167653
    900523 8wgy:E (2.91) BS02 ZN N/A GO:0004386 ... A0A7H0DN89 39167653
    900524 8wgy:F (2.91) BS01 ANP N/A GO:0004386 ... A0A7H0DN89 39167653
    900525 8wgz:C (3.22) BS01 dna N/A GO:0004386 ... A0A7H0DN89 39167653
    900526 8wh0:A (2.51) BS01 dna N/A GO:0004386 ... A0A7H0DN89 39167653
    900527 8wh0:A (2.51) BS02 ANP N/A GO:0004386 ... A0A7H0DN89 39167653
    900528 8wh0:B (2.51) BS01 dna N/A GO:0004386 ... A0A7H0DN89 39167653
    900529 8wh0:B (2.51) BS02 ANP N/A GO:0004386 ... A0A7H0DN89 39167653
    900530 8wh0:B (2.51) BS03 ANP N/A GO:0004386 ... A0A7H0DN89 39167653
    900531 8wh0:C (2.51) BS01 ANP N/A GO:0004386 ... A0A7H0DN89 39167653
    900532 8wh0:D (2.51) BS01 ANP N/A GO:0004386 ... A0A7H0DN89 39167653
    900533 8wh0:F (2.51) BS01 dna N/A GO:0004386 ... A0A7H0DN89 39167653
    900534 8wh0:F (2.51) BS02 ANP N/A GO:0004386 ... A0A7H0DN89 39167653
    900535 8wh2:A (2.9) BS01 dna N/A GO:0004386 ... A0A7H0DN89 39167653
    900536 8wh2:A (2.9) BS02 ATP N/A GO:0004386 ... A0A7H0DN89 39167653
    900537 8wh2:B (2.9) BS01 dna N/A GO:0004386 ... A0A7H0DN89 39167653
    900538 8wh2:B (2.9) BS02 ATP N/A GO:0004386 ... A0A7H0DN89 39167653
    900539 8wh2:D (2.9) BS01 dna N/A GO:0004386 ... A0A7H0DN89 39167653
    900540 8wh2:D (2.9) BS02 ADP N/A GO:0004386 ... A0A7H0DN89 39167653
    900541 8wh2:F (2.9) BS01 dna N/A GO:0004386 ... A0A7H0DN89 39167653
    900542 8wh2:F (2.9) BS02 ATP N/A GO:0004386 ... A0A7H0DN89 39167653
    900543 8wh2:F (2.9) BS03 ADP N/A GO:0004386 ... A0A7H0DN89 39167653
    900544 8wh4:B (3.03) BS01 dna N/A GO:0004386 ... A0A7H0DN89 39167653
    900545 8wh4:C (3.03) BS01 dna N/A GO:0004386 ... A0A7H0DN89 39167653
    900546 8wh4:F (3.03) BS01 dna N/A GO:0004386 ... A0A7H0DN89 39167653
    900547 8wh5:A (3.58) BS01 dna ? GO:0000786 ... P59226 38413824
    900548 8wh5:A (3.58) BS02 dna ? GO:0000786 ... P59226 38413824
    900549 8wh5:B (3.58) BS01 dna ? GO:0000325 ... P59259 38413824
    900550 8wh5:B (3.58) BS02 dna ? GO:0000325 ... P59259 38413824
    900551 8wh5:C (3.58) BS01 dna ? GO:0000786 ... Q9LD28 38413824
    900552 8wh5:C (3.58) BS02 dna ? GO:0000786 ... Q9LD28 38413824
    900553 8wh5:D (3.58) BS01 dna ? GO:0000786 ... O23629 38413824
    900554 8wh5:E (3.58) BS01 dna ? GO:0000786 ... P59226 38413824
    900555 8wh5:F (3.58) BS01 dna ? GO:0000325 ... P59259 38413824
    900556 8wh5:F (3.58) BS02 dna ? GO:0000325 ... P59259 38413824
    900557 8wh5:G (3.58) BS01 dna ? GO:0000786 ... Q9LD28 38413824
    900558 8wh5:G (3.58) BS02 dna ? GO:0000786 ... Q9LD28 38413824
    900559 8wh5:H (3.58) BS01 dna ? GO:0000786 ... O23629 38413824
    900560 8wh5:K (3.58) BS01 dna 3.6.4.12 GO:0000786 ... Q9XFH4 38413824
    900561 8wh5:K (3.58) BS02 dna 3.6.4.12 GO:0000786 ... Q9XFH4 38413824
    900562 8wh6:A (3.27) BS01 ADP N/A GO:0004386 ... A0A7H0DN89 39167653
    900563 8wh6:B (3.27) BS01 ADP N/A GO:0004386 ... A0A7H0DN89 39167653
    900564 8wh6:C (3.27) BS01 dna N/A GO:0004386 ... A0A7H0DN89 39167653
    900565 8wh6:C (3.27) BS02 ADP N/A GO:0004386 ... A0A7H0DN89 39167653
    900566 8wh6:D (3.27) BS01 ADP N/A GO:0004386 ... A0A7H0DN89 39167653
    900567 8wh6:D (3.27) BS02 ZN N/A GO:0004386 ... A0A7H0DN89 39167653
    900568 8wh6:E (3.27) BS01 ZN N/A GO:0004386 ... A0A7H0DN89 39167653
    900569 8wh8:A (3.6) BS01 dna ? GO:0000786 ... P59226 38413824
    900570 8wh8:A (3.6) BS02 dna ? GO:0000786 ... P59226 38413824
    900571 8wh8:B (3.6) BS01 dna ? GO:0000325 ... P59259 38413824
    900572 8wh8:B (3.6) BS02 dna ? GO:0000325 ... P59259 38413824
    900573 8wh8:C (3.6) BS01 dna ? GO:0000786 ... Q9LD28 38413824
    900574 8wh8:C (3.6) BS02 dna ? GO:0000786 ... Q9LD28 38413824
    900575 8wh8:D (3.6) BS01 dna ? GO:0000786 ... O23629 38413824
    900576 8wh8:D (3.6) BS02 dna ? GO:0000786 ... O23629 38413824
    900577 8wh8:E (3.6) BS01 dna ? GO:0000786 ... P59226 38413824
    900578 8wh8:F (3.6) BS01 dna ? GO:0000325 ... P59259 38413824
    900579 8wh8:F (3.6) BS02 dna ? GO:0000325 ... P59259 38413824
    900580 8wh8:G (3.6) BS01 dna ? GO:0000786 ... Q9LD28 38413824
    900581 8wh8:G (3.6) BS02 dna ? GO:0000786 ... Q9LD28 38413824
    900582 8wh8:H (3.6) BS01 dna ? GO:0000786 ... O23629 38413824
    900583 8wh8:K (3.6) BS01 dna 3.6.4.12 GO:0000786 ... Q9XFH4 38413824
    900584 8wh8:K (3.6) BS02 dna 3.6.4.12 GO:0000786 ... Q9XFH4 38413824
    900585 8wh8:K (3.6) BS03 ADP 3.6.4.12 GO:0000786 ... Q9XFH4 38413824
    900586 8wh9:A (3.31) BS01 dna ? GO:0000786 ... P59226 38413824
    900587 8wh9:A (3.31) BS02 dna ? GO:0000786 ... P59226 38413824
    900588 8wh9:B (3.31) BS01 dna ? GO:0000325 ... P59259 38413824
    900589 8wh9:B (3.31) BS02 dna ? GO:0000325 ... P59259 38413824
    900590 8wh9:C (3.31) BS01 dna ? GO:0000786 ... Q9LD28 38413824
    900591 8wh9:C (3.31) BS02 dna ? GO:0000786 ... Q9LD28 38413824
    900592 8wh9:D (3.31) BS01 dna ? GO:0000786 ... O23629 38413824
    900593 8wh9:D (3.31) BS02 dna ? GO:0000786 ... O23629 38413824
    900594 8wh9:E (3.31) BS01 dna ? GO:0000786 ... P59226 38413824
    900595 8wh9:E (3.31) BS02 dna ? GO:0000786 ... P59226 38413824
    900596 8wh9:F (3.31) BS01 dna ? GO:0000325 ... P59259 38413824
    900597 8wh9:G (3.31) BS01 dna ? GO:0000786 ... Q9LD28 38413824
    900598 8wh9:G (3.31) BS02 dna ? GO:0000786 ... Q9LD28 38413824
    900599 8wh9:H (3.31) BS01 dna ? GO:0000786 ... O23629 38413824
    900600 8wh9:H (3.31) BS02 dna ? GO:0000786 ... O23629 38413824

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).