SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 4495 4496 4497 4498 4499 4500 4501 4502 4503 4504 4505 4506 4507 4508 4509 4510 4511 4512 4513 4514 4515 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    900801 8wi8:5 (2.7) BS01 rna ? GO:0003735 ... A0R3I9 38245551
    900802 8wi8:6 (2.7) BS01 rna ? GO:0003735 ... A0QS39 38245551
    900803 8wi8:7 (2.7) BS01 rna ? GO:0003735 ... A0R7K0 38245551
    900804 8wi8:8 (2.7) BS01 rna ? GO:0003735 ... A0QYU7 38245551
    900805 8wi8:E (2.7) BS01 rna ? GO:0002181 ... A0QSD4 38245551
    900806 8wi8:F (2.7) BS01 rna ? GO:0003735 ... A0QSD1 38245551
    900807 8wi8:G (2.7) BS01 rna ? GO:0003735 ... A0QSD2 38245551
    900808 8wi8:H (2.7) BS01 rna ? GO:0000049 ... A0QSG1 38245551
    900809 8wi8:H (2.7) BS02 rna ? GO:0000049 ... A0QSG1 38245551
    900810 8wi8:I (2.7) BS01 rna ? GO:0002181 ... A0QSG4 38245551
    900811 8wi8:J (2.7) BS01 rna ? GO:0003735 ... A0R7F6 38245551
    900812 8wi8:M (2.7) BS01 rna ? GO:0003729 ... A0QSP8 38245551
    900813 8wi8:N (2.7) BS01 rna ? GO:0003735 ... A0QSF9 38245551
    900814 8wi8:O (2.7) BS01 rna ? GO:0003735 ... A0QSG8 38245551
    900815 8wi8:Q (2.7) BS01 rna ? GO:0003735 ... A0QSL9 38245551
    900816 8wi8:R (2.7) BS01 rna ? GO:0003735 ... A0QSG5 38245551
    900817 8wi8:R (2.7) BS02 rna ? GO:0003735 ... A0QSG5 38245551
    900818 8wi8:S (2.7) BS01 rna ? GO:0003735 ... A0QV42 38245551
    900819 8wi8:T (2.7) BS01 rna ? GO:0000027 ... A0QYU6 38245551
    900820 8wi8:U (2.7) BS01 rna ? GO:0003723 ... A0R151 38245551
    900821 8wi8:V (2.7) BS01 rna ? GO:0003735 ... A0QSD6 38245551
    900822 8wi8:W (2.7) BS01 rna ? GO:0003735 ... A0QSD3 38245551
    900823 8wi8:X (2.7) BS01 rna ? GO:0003723 ... A0QSG0 38245551
    900824 8wi8:Z (2.7) BS01 rna ? GO:0003735 ... A0R150 38245551
    900825 8wi9:c (3.5) BS01 rna ? GO:0003735 ... A0QVB8 38245551
    900826 8wi9:d (3.5) BS01 rna ? GO:0003676 ... A0QSD7 38245551
    900827 8wi9:e (3.5) BS01 rna ? GO:0003723 ... A0QSL7 38245551
    900828 8wi9:f (3.5) BS01 rna ? GO:0003723 ... A0QSG6 38245551
    900829 8wi9:g (3.5) BS01 rna ? GO:0003735 ... A0R7F9 38245551
    900830 8wi9:h (3.5) BS01 rna ? GO:0000049 ... A0QS97 38245551
    900831 8wi9:i (3.5) BS01 rna ? GO:0003735 ... A0QSG3 38245551
    900832 8wi9:j (3.5) BS01 rna ? GO:0003723 ... A0QSP9 38245551
    900833 8wi9:k (3.5) BS01 rna ? GO:0000049 ... A0QSD0 38245551
    900834 8wi9:l (3.5) BS01 rna ? GO:0003735 ... A0QSL6 38245551
    900835 8wi9:m (3.5) BS01 rna ? GO:0000049 ... A0QS96 38245551
    900836 8wi9:n (3.5) BS01 rna ? GO:0000049 ... A0QSL5 38245551
    900837 8wi9:o (3.5) BS01 rna ? GO:0003735 ... A0QSG2 38245551
    900838 8wi9:p (3.5) BS01 rna ? GO:0003735 ... A0QVQ3 38245551
    900839 8wi9:q (3.5) BS01 rna ? GO:0003735 ... A0QV37 38245551
    900840 8wi9:r (3.5) BS01 rna ? GO:0003735 ... A0QSE0 38245551
    900841 8wi9:s (3.5) BS01 rna ? GO:0003735 ... A0R7F7 38245551
    900842 8wi9:t (3.5) BS01 rna ? GO:0000028 ... A0QSD5 38245551
    900843 8wi9:t (3.5) BS02 peptide ? GO:0000028 ... A0QSD5 38245551
    900844 8wi9:u (3.5) BS01 rna ? GO:0003723 ... A0R102 38245551
    900845 8wi9:v (3.5) BS01 rna ? N/A A0QR10 38245551
    900846 8wi9:w (3.5) BS01 rna ? GO:0006417 ... A0QZ86 38245551
    900847 8wia:A (1.96) BS01 ZN N/A GO:0000166 ... P0A8M3 39014102
    900848 8wia:B (1.96) BS01 ZN N/A GO:0000166 ... P0A8M3 39014102
    900849 8wib:1 (3.5) BS01 rna ? GO:0003735 ... A0QV03 38245551
    900850 8wib:2 (3.5) BS01 rna ? GO:0003735 ... A0QSD9 38245551
    900851 8wib:3 (3.5) BS01 rna ? GO:0003735 ... A0QSG7 38245551
    900852 8wib:4 (3.5) BS01 rna ? GO:0003735 ... A0R215 38245551
    900853 8wib:5 (3.5) BS01 rna ? GO:0003735 ... A0R3I9 38245551
    900854 8wib:6 (3.5) BS01 rna ? GO:0003735 ... A0QS39 38245551
    900855 8wib:7 (3.5) BS01 rna ? GO:0003735 ... A0R7K0 38245551
    900856 8wib:8 (3.5) BS01 rna ? GO:0003735 ... A0QYU7 38245551
    900857 8wib:E (3.5) BS01 rna ? GO:0002181 ... A0QSD4 38245551
    900858 8wib:F (3.5) BS01 rna ? GO:0003735 ... A0QSD1 38245551
    900859 8wib:G (3.5) BS01 rna ? GO:0003735 ... A0QSD2 38245551
    900860 8wib:H (3.5) BS01 rna ? GO:0000049 ... A0QSG1 38245551
    900861 8wib:H (3.5) BS02 rna ? GO:0000049 ... A0QSG1 38245551
    900862 8wib:I (3.5) BS01 rna ? GO:0002181 ... A0QSG4 38245551
    900863 8wib:J (3.5) BS01 rna ? GO:0003735 ... A0R7F6 38245551
    900864 8wib:M (3.5) BS01 rna ? GO:0003729 ... A0QSP8 38245551
    900865 8wib:N (3.5) BS01 rna ? GO:0003735 ... A0QSF9 38245551
    900866 8wib:N (3.5) BS02 rna ? GO:0003735 ... A0QSF9 38245551
    900867 8wib:O (3.5) BS01 rna ? GO:0003735 ... A0QSG8 38245551
    900868 8wib:Q (3.5) BS01 rna ? GO:0003735 ... A0QSL9 38245551
    900869 8wib:R (3.5) BS01 rna ? GO:0003735 ... A0QSG5 38245551
    900870 8wib:R (3.5) BS02 rna ? GO:0003735 ... A0QSG5 38245551
    900871 8wib:S (3.5) BS01 rna ? GO:0003735 ... A0QV42 38245551
    900872 8wib:S (3.5) BS02 rna ? GO:0003735 ... A0QV42 38245551
    900873 8wib:T (3.5) BS01 rna ? GO:0000027 ... A0QYU6 38245551
    900874 8wib:U (3.5) BS01 rna ? GO:0003723 ... A0R151 38245551
    900875 8wib:V (3.5) BS01 rna ? GO:0003735 ... A0QSD6 38245551
    900876 8wib:W (3.5) BS01 rna ? GO:0003735 ... A0QSD3 38245551
    900877 8wib:X (3.5) BS01 rna ? GO:0003723 ... A0QSG0 38245551
    900878 8wib:Z (3.5) BS01 rna ? GO:0003735 ... A0R150 38245551
    900879 8wib:Z (3.5) BS02 rna ? GO:0003735 ... A0R150 38245551
    900880 8wib:d (3.5) BS01 rna ? GO:0003676 ... A0QSD7 38245551
    900881 8wib:e (3.5) BS01 rna ? GO:0003723 ... A0QSL7 38245551
    900882 8wib:f (3.5) BS01 rna ? GO:0003723 ... A0QSG6 38245551
    900883 8wib:g (3.5) BS01 rna ? GO:0003735 ... A0R7F9 38245551
    900884 8wib:g (3.5) BS02 rna ? GO:0003735 ... A0R7F9 38245551
    900885 8wib:h (3.5) BS01 rna ? GO:0000049 ... A0QS97 38245551
    900886 8wib:h (3.5) BS02 rna ? GO:0000049 ... A0QS97 38245551
    900887 8wib:i (3.5) BS01 rna ? GO:0003735 ... A0QSG3 38245551
    900888 8wib:j (3.5) BS01 rna ? GO:0003723 ... A0QSP9 38245551
    900889 8wib:k (3.5) BS01 rna ? GO:0000049 ... A0QSD0 38245551
    900890 8wib:l (3.5) BS01 rna ? GO:0003735 ... A0QSL6 38245551
    900891 8wib:l (3.5) BS02 rna ? GO:0003735 ... A0QSL6 38245551
    900892 8wib:m (3.5) BS01 rna ? GO:0000049 ... A0QS96 38245551
    900893 8wib:n (3.5) BS01 rna ? GO:0000049 ... A0QSL5 38245551
    900894 8wib:o (3.5) BS01 rna ? GO:0003735 ... A0R550 38245551
    900895 8wib:p (3.5) BS01 rna ? GO:0003735 ... A0QVQ3 38245551
    900896 8wib:p (3.5) BS02 rna ? GO:0003735 ... A0QVQ3 38245551
    900897 8wib:q (3.5) BS01 rna ? GO:0003735 ... A0QV37 38245551
    900898 8wib:r (3.5) BS01 rna ? GO:0003735 ... A0QSE0 38245551
    900899 8wib:s (3.5) BS01 rna ? GO:0003735 ... A0R7F7 38245551
    900900 8wib:t (3.5) BS01 rna ? GO:0000028 ... A0QSD5 38245551
    900901 8wib:u (3.5) BS01 rna ? GO:0003723 ... A0R102 38245551
    900902 8wib:v (3.5) BS01 rna ? N/A A0QR10 38245551
    900903 8wib:w (3.5) BS01 rna ? GO:0006417 ... A0QZ86 38245551
    900904 8wic:1 (3.5) BS01 rna ? GO:0003735 ... A0QV03 38245551
    900905 8wic:2 (3.5) BS01 rna ? GO:0003735 ... A0QSD9 38245551
    900906 8wic:3 (3.5) BS01 rna ? GO:0003735 ... A0QSG7 38245551
    900907 8wic:3 (3.5) BS02 rna ? GO:0003735 ... A0QSG7 38245551
    900908 8wic:5 (3.5) BS01 rna ? GO:0003735 ... A0R3I9 38245551
    900909 8wic:6 (3.5) BS01 rna ? GO:0003735 ... A0QS39 38245551
    900910 8wic:7 (3.5) BS01 rna ? GO:0003735 ... A0R7K0 38245551
    900911 8wic:8 (3.5) BS01 rna ? GO:0003735 ... A0QYU7 38245551
    900912 8wic:E (3.5) BS01 rna ? GO:0002181 ... A0QSD4 38245551
    900913 8wic:F (3.5) BS01 rna ? GO:0003735 ... A0QSD1 38245551
    900914 8wic:G (3.5) BS01 rna ? GO:0003735 ... A0QSD2 38245551
    900915 8wic:H (3.5) BS01 rna ? GO:0000049 ... A0QSG1 38245551
    900916 8wic:H (3.5) BS02 rna ? GO:0000049 ... A0QSG1 38245551
    900917 8wic:I (3.5) BS01 rna ? GO:0002181 ... A0QSG4 38245551
    900918 8wic:J (3.5) BS01 rna ? GO:0003735 ... A0R7F6 38245551
    900919 8wic:M (3.5) BS01 rna ? GO:0003729 ... A0QSP8 38245551
    900920 8wic:N (3.5) BS01 rna ? GO:0003735 ... A0QSF9 38245551
    900921 8wic:O (3.5) BS01 rna ? GO:0003735 ... A0QSG8 38245551
    900922 8wic:Q (3.5) BS01 rna ? GO:0003735 ... A0QSL9 38245551
    900923 8wic:R (3.5) BS01 rna ? GO:0003735 ... A0QSG5 38245551
    900924 8wic:R (3.5) BS02 rna ? GO:0003735 ... A0QSG5 38245551
    900925 8wic:S (3.5) BS01 rna ? GO:0003735 ... A0QV42 38245551
    900926 8wic:T (3.5) BS01 rna ? GO:0000027 ... A0QYU6 38245551
    900927 8wic:U (3.5) BS01 rna ? GO:0003723 ... A0R151 38245551
    900928 8wic:V (3.5) BS01 rna ? GO:0003735 ... A0QSD6 38245551
    900929 8wic:W (3.5) BS01 rna ? GO:0003735 ... A0QSD3 38245551
    900930 8wic:X (3.5) BS01 rna ? GO:0003723 ... A0QSG0 38245551
    900931 8wic:Z (3.5) BS01 rna ? GO:0003735 ... A0R150 38245551
    900932 8wic:Z (3.5) BS02 rna ? GO:0003735 ... A0R150 38245551
    900933 8wid:d (3.5) BS01 rna ? GO:0003676 ... A0QSD7 38245551
    900934 8wid:e (3.5) BS01 rna ? GO:0003723 ... A0QSL7 38245551
    900935 8wid:f (3.5) BS01 rna ? GO:0003723 ... A0QSG6 38245551
    900936 8wid:g (3.5) BS01 rna ? GO:0003735 ... A0R7F9 38245551
    900937 8wid:h (3.5) BS01 rna ? GO:0000049 ... A0QS97 38245551
    900938 8wid:h (3.5) BS02 rna ? GO:0000049 ... A0QS97 38245551
    900939 8wid:i (3.5) BS01 rna ? GO:0003735 ... A0QSG3 38245551
    900940 8wid:j (3.5) BS01 rna ? GO:0003723 ... A0QSP9 38245551
    900941 8wid:k (3.5) BS01 rna ? GO:0000049 ... A0QSD0 38245551
    900942 8wid:l (3.5) BS01 rna ? GO:0003735 ... A0QSL6 38245551
    900943 8wid:l (3.5) BS02 rna ? GO:0003735 ... A0QSL6 38245551
    900944 8wid:m (3.5) BS01 rna ? GO:0000049 ... A0QS96 38245551
    900945 8wid:n (3.5) BS01 rna ? GO:0000049 ... A0QSL5 38245551
    900946 8wid:o (3.5) BS01 rna ? GO:0003735 ... A0R550 38245551
    900947 8wid:p (3.5) BS01 rna ? GO:0003735 ... A0QVQ3 38245551
    900948 8wid:q (3.5) BS01 rna ? GO:0003735 ... A0QV37 38245551
    900949 8wid:r (3.5) BS01 rna ? GO:0003735 ... A0QSE0 38245551
    900950 8wid:s (3.5) BS01 rna ? GO:0003735 ... A0R7F7 38245551
    900951 8wid:t (3.5) BS01 rna ? GO:0000028 ... A0QSD5 38245551
    900952 8wid:t (3.5) BS02 peptide ? GO:0000028 ... A0QSD5 38245551
    900953 8wid:u (3.5) BS01 rna ? GO:0003723 ... A0R102 38245551
    900954 8wid:v (3.5) BS01 rna ? N/A A0QR10 38245551
    900955 8wid:w (3.5) BS01 rna ? GO:0006417 ... A0QZ86 38245551
    900956 8wid:w (3.5) BS02 rna ? GO:0006417 ... A0QZ86 38245551
    900957 8wie:D (2.3) BS01 FE N/A GO:0004322 ... P02794 N/A
    900958 8wif:c (2.9) BS01 rna ? GO:0003735 ... A0QVB8 38245551
    900959 8wif:d (2.9) BS01 rna ? GO:0003676 ... A0QSD7 38245551
    900960 8wif:e (2.9) BS01 rna ? GO:0003723 ... A0QSL7 38245551
    900961 8wif:f (2.9) BS01 rna ? GO:0003723 ... A0QSG6 38245551
    900962 8wif:g (2.9) BS01 rna ? GO:0003735 ... A0R7F9 38245551
    900963 8wif:h (2.9) BS01 rna ? GO:0000049 ... A0QS97 38245551
    900964 8wif:i (2.9) BS01 rna ? GO:0003735 ... A0QSG3 38245551
    900965 8wif:j (2.9) BS01 rna ? GO:0003723 ... A0QSP9 38245551
    900966 8wif:k (2.9) BS01 rna ? GO:0000049 ... A0QSD0 38245551
    900967 8wif:l (2.9) BS01 rna ? GO:0003735 ... A0QSL6 38245551
    900968 8wif:m (2.9) BS01 rna ? GO:0000049 ... A0QS96 38245551
    900969 8wif:n (2.9) BS01 rna ? GO:0000049 ... A0QSL5 38245551
    900970 8wif:o (2.9) BS01 rna ? GO:0003735 ... A0R550 38245551
    900971 8wif:p (2.9) BS01 rna ? GO:0003735 ... A0QVQ3 38245551
    900972 8wif:q (2.9) BS01 rna ? GO:0003735 ... A0QV37 38245551
    900973 8wif:r (2.9) BS01 rna ? GO:0003735 ... A0QSE0 38245551
    900974 8wif:s (2.9) BS01 rna ? GO:0003735 ... A0R7F7 38245551
    900975 8wif:t (2.9) BS01 rna ? GO:0000028 ... A0QSD5 38245551
    900976 8wif:t (2.9) BS02 peptide ? GO:0000028 ... A0QSD5 38245551
    900977 8wif:u (2.9) BS01 rna ? GO:0003723 ... A0R102 38245551
    900978 8wif:v (2.9) BS01 rna ? N/A A0QR10 38245551
    900979 8wif:w (2.9) BS01 rna ? GO:0006417 ... A0QZ86 38245551
    900980 8wig:A (3.22) BS01 ZN N/A GO:0000166 ... P0A8M3 39014102
    900981 8wig:B (3.22) BS01 ZN N/A GO:0000166 ... P0A8M3 39014102
    900982 8wih:A (2.44) BS01 ATP N/A GO:0000166 ... P0A8M3 39014102
    900983 8wih:A (2.44) BS02 ZN N/A GO:0000166 ... P0A8M3 39014102
    900984 8wih:B (2.44) BS01 ATP N/A GO:0000166 ... P0A8M3 39014102
    900985 8wih:B (2.44) BS02 ZN N/A GO:0000166 ... P0A8M3 39014102
    900986 8wii:A (2.98) BS01 WE3 N/A GO:0000166 ... P0A8M3 39014102
    900987 8wii:A (2.98) BS02 ZN N/A GO:0000166 ... P0A8M3 39014102
    900988 8wii:B (2.98) BS01 WE3 N/A GO:0000166 ... P0A8M3 39014102
    900989 8wii:B (2.98) BS02 ZN N/A GO:0000166 ... P0A8M3 39014102
    900990 8wij:A (3.08) BS01 X5V N/A GO:0000166 ... P0A8M3 39014102
    900991 8wij:A (3.08) BS02 ZN N/A GO:0000166 ... P0A8M3 39014102
    900992 8wij:B (3.08) BS01 X5V N/A GO:0000166 ... P0A8M3 39014102
    900993 8wij:B (3.08) BS02 ZN N/A GO:0000166 ... P0A8M3 39014102
    900994 8wik:A (2.0) BS01 6FA 1.6.5.- GO:0003677 ... Q9BRQ8 38414669
    900995 8wik:A (2.0) BS02 NAD 1.6.5.- GO:0003677 ... Q9BRQ8 38414669
    900996 8wil:A (2.1) BS01 MG 3.6.4.13 GO:0001172 ... A0A7D0QVD8 38296832
    900997 8wim:A (1.84) BS01 MG 3.6.4.13 GO:0003968 ... A0A7D0QVD8 38296832
    900998 8wiu:A (1.4) BS01 WPR ? N/A O60885 38142510
    900999 8wiv:D (3.41) BS01 MG N/A N/A N/A N/A
    901000 8wiv:D (3.41) BS02 AGS N/A N/A N/A N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).