SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    901001 8wiv:L (3.41) BS01 AGS N/A N/A N/A N/A
    901002 8wiv:M (3.41) BS01 AGS N/A N/A N/A N/A
    901003 8wiv:M (3.41) BS02 MG N/A N/A N/A N/A
    901004 8wiv:O (3.41) BS01 AGS N/A N/A N/A N/A
    901005 8wiv:O (3.41) BS02 MG N/A N/A N/A N/A
    901006 8wiw:3 (5.6) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    901007 8wiw:8 (5.6) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    901008 8wiw:A4 (5.6) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    901009 8wiw:AM (5.6) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    901010 8wiw:AS (5.6) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    901011 8wiw:AY (5.6) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    901012 8wiw:Ae (5.6) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    901013 8wiw:Ak (5.6) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    901014 8wiw:Aq (5.6) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    901015 8wiw:Aw (5.6) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    901016 8wiw:B5 (5.6) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    901017 8wiw:BA (5.6) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    901018 8wiw:BH (5.6) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    901019 8wiw:BO (5.6) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    901020 8wiw:BV (5.6) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    901021 8wiw:Bc (5.6) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    901022 8wiw:Bj (5.6) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    901023 8wiw:Bq (5.6) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    901024 8wiw:Bx (5.6) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    901025 8wiw:CB (5.6) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    901026 8wiw:CI (5.6) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    901027 8wiw:CP (5.6) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    901028 8wiw:CW (5.6) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    901029 8wiw:Cd (5.6) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    901030 8wiw:Ck (5.6) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    901031 8wiw:Cr (5.6) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    901032 8wiw:Cy (5.6) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    901033 8wiw:Z (5.6) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    901034 8wiw:a (5.6) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    901035 8wiw:b (5.6) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    901036 8wiw:c (5.6) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    901037 8wiw:d (5.6) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    901038 8wiw:e (5.6) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    901039 8wiw:f (5.6) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    901040 8wix:A (2.29) BS01 HEM N/A GO:0004601 ... P01999 39090102
    901041 8wix:B (2.29) BS01 HEM N/A GO:0004601 ... P02130 39090102
    901042 8wiy:A (2.31) BS01 HEM N/A GO:0004601 ... P01999 39090102
    901043 8wiy:A (2.31) BS02 OXY N/A GO:0004601 ... P01999 39090102
    901044 8wiy:B (2.31) BS01 HEM N/A GO:0004601 ... P02130 39090102
    901045 8wiy:B (2.31) BS02 OXY N/A GO:0004601 ... P02130 39090102
    901046 8wiz:A (2.2) BS01 HEM N/A GO:0004601 ... P01999 39090102
    901047 8wiz:B (2.2) BS01 HEM N/A GO:0004601 ... P02130 39090102
    901048 8wiz:B (2.2) BS02 BCT N/A GO:0004601 ... P02130 39090102
    901049 8wj0:A (2.24) BS01 HEM N/A GO:0004601 ... P69905 39090102
    901050 8wj0:B (2.24) BS01 HEM N/A GO:0004601 ... P68871 39090102
    901051 8wj1:A (2.27) BS01 HEM N/A GO:0004601 ... P69905 39090102
    901052 8wj1:A (2.27) BS02 OXY N/A GO:0004601 ... P69905 39090102
    901053 8wj1:B (2.27) BS01 HEM N/A GO:0004601 ... P68871 39090102
    901054 8wj1:B (2.27) BS02 OXY N/A GO:0004601 ... P68871 39090102
    901055 8wj2:A (2.35) BS01 HEM N/A GO:0004601 ... P69905 39090102
    901056 8wj2:B (2.35) BS01 HEM N/A GO:0004601 ... P68871 39090102
    901057 8wj3:L (3.36) BS01 AGS N/A N/A N/A N/A
    901058 8wj3:M (3.36) BS01 AGS N/A N/A N/A N/A
    901059 8wj3:M (3.36) BS02 MG N/A N/A N/A N/A
    901060 8wj3:O (3.36) BS01 AGS N/A N/A N/A N/A
    901061 8wj3:O (3.36) BS02 MG N/A N/A N/A N/A
    901062 8wjc:A (2.11) BS01 4BW N/A GO:0000166 ... A0A447EB45 39478223
    901063 8wjc:B (2.11) BS01 4BW N/A GO:0000166 ... A0A447EB45 39478223
    901064 8wjc:C (2.11) BS01 4BW N/A GO:0000166 ... A0A447EB45 39478223
    901065 8wjc:D (2.11) BS01 4BW N/A GO:0000166 ... A0A447EB45 39478223
    901066 8wjd:A (1.71) BS01 C2E N/A N/A N/A 39478223
    901067 8wjx:R (3.2) BS01 ADP N/A GO:0001621 ... P0ABE7
    P47900
    Q9GV45
    N/A
    901068 8wjx:R (3.2) BS02 CLR N/A GO:0001621 ... P0ABE7
    P47900
    Q9GV45
    N/A
    901069 8wjy:A (1.88) BS01 W9X 2.7.11.1 GO:0004672 ... Q99640 38146659
    901070 8wjz:A (1.606) BS01 CO N/A GO:0003868 ... P93836 N/A
    901071 8wjz:A (1.606) BS02 94L N/A GO:0003868 ... P93836 N/A
    901072 8wk0:D (3.34) BS01 AGS N/A N/A N/A N/A
    901073 8wk0:L (3.34) BS01 AGS N/A N/A N/A N/A
    901074 8wk0:M (3.34) BS01 AGS N/A N/A N/A N/A
    901075 8wk0:N (3.34) BS01 AGS N/A N/A N/A N/A
    901076 8wk0:O (3.34) BS01 AGS N/A N/A N/A N/A
    901077 8wk0:O (3.34) BS02 MG N/A N/A N/A N/A
    901078 8wk2:A (1.806) BS01 CO N/A GO:0003868 ... P93836 N/A
    901079 8wk2:A (1.806) BS02 92X N/A GO:0003868 ... P93836 N/A
    901080 8wk3:P (3.3) BS01 peptide N/A GO:0003774 ... P26462 N/A
    901081 8wk3:Q (3.3) BS01 peptide N/A GO:0009288 ... P16437 N/A
    901082 8wk3:Q (3.3) BS02 peptide N/A GO:0009288 ... P16437 N/A
    901083 8wk3:R (3.3) BS01 peptide N/A GO:0009288 ... P16437 N/A
    901084 8wk3:R (3.3) BS02 peptide N/A GO:0009288 ... P16437 N/A
    901085 8wk3:S (3.3) BS01 peptide N/A GO:0009288 ... P16437 N/A
    901086 8wk3:S (3.3) BS02 peptide N/A GO:0009288 ... P16437 N/A
    901087 8wk3:T (3.3) BS01 peptide N/A GO:0009288 ... P16437 N/A
    901088 8wk3:T (3.3) BS02 peptide N/A GO:0009288 ... P16437 N/A
    901089 8wk3:U (3.3) BS01 peptide N/A GO:0009288 ... P16437 N/A
    901090 8wk3:U (3.3) BS02 peptide N/A GO:0009288 ... P16437 N/A
    901091 8wk3:V (3.3) BS01 peptide N/A GO:0009288 ... P0A1I7 N/A
    901092 8wk3:V (3.3) BS02 peptide N/A GO:0009288 ... P0A1I7 N/A
    901093 8wk3:W (3.3) BS01 peptide N/A GO:0009288 ... P0A1I7 N/A
    901094 8wk3:X (3.3) BS01 peptide N/A GO:0009288 ... P0A1I7 N/A
    901095 8wk3:Y (3.3) BS01 peptide N/A GO:0009288 ... P0A1I7 N/A
    901096 8wk3:Z (3.3) BS01 peptide N/A GO:0009288 ... P0A1I7 N/A
    901097 8wk3:a (3.3) BS01 peptide N/A GO:0009288 ... P0A1I7 N/A
    901098 8wk3:a (3.3) BS02 peptide N/A GO:0009288 ... P0A1I7 N/A
    901099 8wk3:m (3.3) BS01 peptide N/A GO:0009288 ... P16323 N/A
    901100 8wk3:m (3.3) BS02 peptide N/A GO:0009288 ... P16323 N/A
    901101 8wk3:n (3.3) BS01 peptide N/A GO:0009288 ... P16323 N/A
    901102 8wk3:n (3.3) BS02 peptide N/A GO:0009288 ... P16323 N/A
    901103 8wk3:o (3.3) BS01 peptide N/A GO:0009288 ... P16323 N/A
    901104 8wk3:o (3.3) BS02 peptide N/A GO:0009288 ... P16323 N/A
    901105 8wk3:p (3.3) BS01 peptide N/A GO:0009288 ... P16323 N/A
    901106 8wk3:p (3.3) BS02 peptide N/A GO:0009288 ... P16323 N/A
    901107 8wk3:q (3.3) BS01 peptide N/A GO:0009288 ... P16323 N/A
    901108 8wk3:q (3.3) BS02 peptide N/A GO:0009288 ... P16323 N/A
    901109 8wk4:A (3.7) BS01 peptide N/A GO:0003774 ... P15928 N/A
    901110 8wk4:A (3.7) BS02 peptide N/A GO:0003774 ... P15928 N/A
    901111 8wk4:B (3.7) BS01 peptide N/A GO:0003774 ... P15928 N/A
    901112 8wk4:F (3.7) BS01 peptide N/A GO:0003774 ... P15928 N/A
    901113 8wk4:G (3.7) BS01 peptide N/A GO:0003774 ... P15928 N/A
    901114 8wk4:G (3.7) BS02 peptide N/A GO:0003774 ... P15928 N/A
    901115 8wk4:H (3.7) BS01 peptide N/A GO:0003774 ... P15928 N/A
    901116 8wk4:H (3.7) BS02 peptide N/A GO:0003774 ... P15928 N/A
    901117 8wk4:I (3.7) BS01 peptide N/A GO:0003774 ... P15928 N/A
    901118 8wk4:L (3.7) BS01 peptide N/A GO:0003774 ... P15928 N/A
    901119 8wk4:M (3.7) BS01 peptide N/A GO:0003774 ... P15928 N/A
    901120 8wk4:M (3.7) BS02 peptide N/A GO:0003774 ... P15928 N/A
    901121 8wk4:N (3.7) BS01 peptide N/A GO:0003774 ... P15928 N/A
    901122 8wk4:N (3.7) BS02 peptide N/A GO:0003774 ... P15928 N/A
    901123 8wk4:O (3.7) BS01 peptide N/A GO:0003774 ... P15928 N/A
    901124 8wk4:Q (3.7) BS01 peptide N/A GO:0003774 ... P15928 N/A
    901125 8wk4:R (3.7) BS01 peptide N/A GO:0003774 ... P15928 N/A
    901126 8wk4:S (3.7) BS01 peptide N/A GO:0003774 ... P15928 N/A
    901127 8wk4:T (3.7) BS01 peptide N/A GO:0003774 ... P15928 N/A
    901128 8wk4:T (3.7) BS02 peptide N/A GO:0003774 ... P15928 N/A
    901129 8wk4:U (3.7) BS01 peptide N/A GO:0003774 ... P15928 N/A
    901130 8wk4:V (3.7) BS01 peptide N/A GO:0003774 ... P15928 N/A
    901131 8wk4:W (3.7) BS01 peptide N/A GO:0003774 ... P15928 N/A
    901132 8wk4:X (3.7) BS01 peptide N/A GO:0003774 ... P15928 N/A
    901133 8wk4:Y (3.7) BS01 peptide N/A GO:0003774 ... P15928 N/A
    901134 8wk4:Z (3.7) BS01 peptide N/A GO:0003774 ... P15928 N/A
    901135 8wk4:Z (3.7) BS02 peptide N/A GO:0003774 ... P15928 N/A
    901136 8wk4:a (3.7) BS01 peptide N/A GO:0003774 ... P15928 N/A
    901137 8wk4:b (3.7) BS01 peptide N/A GO:0003774 ... P15928 N/A
    901138 8wk4:b (3.7) BS02 peptide N/A GO:0003774 ... P15928 N/A
    901139 8wk4:c (3.7) BS01 peptide N/A GO:0003774 ... P15928 N/A
    901140 8wk4:d (3.7) BS01 peptide N/A GO:0003774 ... P15928 N/A
    901141 8wk4:g (3.7) BS01 peptide N/A GO:0003774 ... P15928 N/A
    901142 8wk4:h (3.7) BS01 peptide N/A GO:0003774 ... P15928 N/A
    901143 8wkb:D (2.35) BS01 CA N/A GO:0046872 ... A0A6P5Y1F9 39565068
    901144 8wkb:D (2.35) BS02 CA N/A GO:0046872 ... A0A6P5Y1F9 39565068
    901145 8wkc:A (1.7) BS01 FAD N/A GO:0000166 ... Q2CGV0 N/A
    901146 8wkc:A (1.7) BS02 NAP N/A GO:0000166 ... Q2CGV0 N/A
    901147 8wkd:A (1.98) BS01 peptide N/A N/A A0A0F8NKN3 39745918
    901148 8wkf:A (2.4) BS01 WD3 N/A N/A O76074 N/A
    901149 8wkf:A (2.4) BS02 ZN N/A N/A O76074 N/A
    901150 8wkg:A (2.4) BS01 WDB N/A N/A O76074 N/A
    901151 8wkg:A (2.4) BS02 ZN N/A N/A O76074 N/A
    901152 8wkj:A (1.7) BS01 PLP 2.6.1.- GO:0003824 ... A0A130QXX8 37984176
    901153 8wkk:P (3.3) BS01 peptide N/A GO:0003774 ... P26462 N/A
    901154 8wkk:Q (3.3) BS01 peptide N/A GO:0009288 ... P16437 N/A
    901155 8wkk:Q (3.3) BS02 peptide N/A GO:0009288 ... P16437 N/A
    901156 8wkk:R (3.3) BS01 peptide N/A GO:0009288 ... P16437 N/A
    901157 8wkk:R (3.3) BS02 peptide N/A GO:0009288 ... P16437 N/A
    901158 8wkk:S (3.3) BS01 peptide N/A GO:0009288 ... P16437 N/A
    901159 8wkk:S (3.3) BS02 peptide N/A GO:0009288 ... P16437 N/A
    901160 8wkk:T (3.3) BS01 peptide N/A GO:0009288 ... P16437 N/A
    901161 8wkk:T (3.3) BS02 peptide N/A GO:0009288 ... P16437 N/A
    901162 8wkk:U (3.3) BS01 peptide N/A GO:0009288 ... P16437 N/A
    901163 8wkk:U (3.3) BS02 peptide N/A GO:0009288 ... P16437 N/A
    901164 8wkk:V (3.3) BS01 peptide N/A GO:0009288 ... P0A1I7 N/A
    901165 8wkk:V (3.3) BS02 peptide N/A GO:0009288 ... P0A1I7 N/A
    901166 8wkk:W (3.3) BS01 peptide N/A GO:0009288 ... P0A1I7 N/A
    901167 8wkk:X (3.3) BS01 peptide N/A GO:0009288 ... P0A1I7 N/A
    901168 8wkk:Y (3.3) BS01 peptide N/A GO:0009288 ... P0A1I7 N/A
    901169 8wkk:Z (3.3) BS01 peptide N/A GO:0009288 ... P0A1I7 N/A
    901170 8wkk:a (3.3) BS01 peptide N/A GO:0009288 ... P0A1I7 N/A
    901171 8wkk:a (3.3) BS02 peptide N/A GO:0009288 ... P0A1I7 N/A
    901172 8wkk:m (3.3) BS01 peptide N/A GO:0009288 ... P16323 N/A
    901173 8wkk:m (3.3) BS02 peptide N/A GO:0009288 ... P16323 N/A
    901174 8wkk:n (3.3) BS01 peptide N/A GO:0009288 ... P16323 N/A
    901175 8wkk:n (3.3) BS02 peptide N/A GO:0009288 ... P16323 N/A
    901176 8wkk:o (3.3) BS01 peptide N/A GO:0009288 ... P16323 N/A
    901177 8wkk:o (3.3) BS02 peptide N/A GO:0009288 ... P16323 N/A
    901178 8wkk:p (3.3) BS01 peptide N/A GO:0009288 ... P16323 N/A
    901179 8wkk:p (3.3) BS02 peptide N/A GO:0009288 ... P16323 N/A
    901180 8wkk:q (3.3) BS01 peptide N/A GO:0009288 ... P16323 N/A
    901181 8wkk:q (3.3) BS02 peptide N/A GO:0009288 ... P16323 N/A
    901182 8wkk:u (3.3) BS01 peptide N/A GO:0009288 ... P0A1J3 N/A
    901183 8wkl:A (2.67) BS01 F66 4.3.3.2 GO:0005773 ... P68175 38354931
    901184 8wkl:B (2.67) BS01 F66 4.3.3.2 GO:0005773 ... P68175 38354931
    901185 8wkl:C (2.67) BS01 F66 4.3.3.2 GO:0005773 ... P68175 38354931
    901186 8wkl:D (2.67) BS01 F66 4.3.3.2 GO:0005773 ... P68175 38354931
    901187 8wkl:E (2.67) BS01 F66 4.3.3.2 GO:0005773 ... P68175 38354931
    901188 8wkl:F (2.67) BS01 F66 4.3.3.2 GO:0005773 ... P68175 38354931
    901189 8wkl:G (2.67) BS01 F66 4.3.3.2 GO:0005773 ... P68175 38354931
    901190 8wkl:H (2.67) BS01 F66 4.3.3.2 GO:0005773 ... P68175 38354931
    901191 8wko:A (2.91) BS01 LLP ? GO:0006520 ... N/A 38568076
    901192 8wko:A (2.91) BS02 PRO ? GO:0006520 ... N/A 38568076
    901193 8wko:B (2.91) BS01 PRO ? GO:0006520 ... N/A 38568076
    901194 8wko:B (2.91) BS02 LLP ? GO:0006520 ... N/A 38568076
    901195 8wkp:AS2P (4.62) BS01 rna ? GO:0003735 ... P39478 38599770
    901196 8wkp:AS2P (4.62) BS02 UNK ? GO:0003735 ... P39478 38599770
    901197 8wkp:AS2P (4.62) BS03 UNK ? GO:0003735 ... P39478 38599770
    901198 8wkp:AS2P (4.62) BS04 UNK ? GO:0003735 ... P39478 38599770
    901199 8wkp:AS2P (4.62) BS05 UNK ? GO:0003735 ... P39478 38599770
    901200 8wkp:AS3P (4.62) BS01 rna ? GO:0003676 ... Q4JB46 38599770

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).