SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    901201 8wkp:AS4E (4.62) BS01 rna ? GO:0003723 ... O05634 38599770
    901202 8wkp:AS4P (4.62) BS01 rna ? GO:0003723 ... P39467 38599770
    901203 8wkp:AS5P (4.62) BS01 rna ? GO:0003723 ... O05641 38599770
    901204 8wkp:AS5P (4.62) BS02 UNK ? GO:0003723 ... O05641 38599770
    901205 8wkp:AS5P (4.62) BS03 UNK ? GO:0003723 ... O05641 38599770
    901206 8wkp:AS6E (4.62) BS01 rna ? GO:0003735 ... Q4JAI1 38599770
    901207 8wkp:AS7P (4.62) BS01 rna ? GO:0003723 ... P17198 38599770
    901208 8wkp:AS8E (4.62) BS01 rna ? GO:0003735 ... Q4JAP5 38599770
    901209 8wkp:AS8P (4.62) BS01 rna ? GO:0003735 ... O05636 38599770
    901210 8wkp:AS9P (4.62) BS01 rna ? GO:0000462 ... P39468 38599770
    901211 8wkp:S10P (4.62) BS01 rna ? GO:0000049 ... P17199 38599770
    901212 8wkp:S11P (4.62) BS01 rna ? GO:0003735 ... P39469 38599770
    901213 8wkp:S11P (4.62) BS02 rna ? GO:0003735 ... P39469 38599770
    901214 8wkp:S12P (4.62) BS01 rna ? GO:0003735 ... P11524 38599770
    901215 8wkp:S13P (4.62) BS01 rna ? GO:0003676 ... P39470 38599770
    901216 8wkp:S14P (4.62) BS01 rna ? GO:0002181 ... O05635 38599770
    901217 8wkp:S15P (4.62) BS01 rna ? GO:0003735 ... Q4JAI3 38599770
    901218 8wkp:S17E (4.62) BS01 rna ? GO:0003735 ... Q4JAX5 38599770
    901219 8wkp:S17P (4.62) BS01 rna ? GO:0003735 ... Q4JB49 38599770
    901220 8wkp:S19E (4.62) BS01 rna ? GO:0000028 ... Q4J8U1 38599770
    901221 8wkp:S19P (4.62) BS01 rna ? GO:0003723 ... Q4JB44 38599770
    901222 8wkp:S24E (4.62) BS01 rna ? GO:0003735 ... Q4JAF9 38599770
    901223 8wkp:S27A (4.62) BS01 rna ? GO:0003735 ... Q4JAG0 38599770
    901224 8wkp:S27E (4.62) BS01 rna ? GO:0003735 ... Q4J9B1 38599770
    901225 8wkp:S28E (4.62) BS01 rna ? GO:0003735 ... Q4JAV1 38599770
    901226 8wkp:S3AE (4.62) BS01 rna ? GO:0003735 ... Q4JB17 38599770
    901227 8wkp:SL7A (4.62) BS01 rna ? GO:0001682 ... Q4J8P1 38599770
    901228 8wkq:4 (3.8) BS01 peptide N/A GO:0003774 ... P15928 N/A
    901229 8wkq:AM (3.8) BS01 peptide N/A GO:0003774 ... P15928 N/A
    901230 8wkq:P (3.8) BS01 peptide N/A GO:0003774 ... P26462 N/A
    901231 8wkq:Q (3.8) BS01 peptide N/A GO:0009288 ... P16437 N/A
    901232 8wkq:Q (3.8) BS02 peptide N/A GO:0009288 ... P16437 N/A
    901233 8wkq:R (3.8) BS01 peptide N/A GO:0009288 ... P16437 N/A
    901234 8wkq:R (3.8) BS02 peptide N/A GO:0009288 ... P16437 N/A
    901235 8wkq:S (3.8) BS01 peptide N/A GO:0009288 ... P16437 N/A
    901236 8wkq:S (3.8) BS02 peptide N/A GO:0009288 ... P16437 N/A
    901237 8wkq:T (3.8) BS01 peptide N/A GO:0009288 ... P16437 N/A
    901238 8wkq:T (3.8) BS02 peptide N/A GO:0009288 ... P16437 N/A
    901239 8wkq:U (3.8) BS01 peptide N/A GO:0009288 ... P16437 N/A
    901240 8wkq:U (3.8) BS02 peptide N/A GO:0009288 ... P16437 N/A
    901241 8wkq:V (3.8) BS01 peptide N/A GO:0009288 ... P0A1I7 N/A
    901242 8wkq:V (3.8) BS02 peptide N/A GO:0009288 ... P0A1I7 N/A
    901243 8wkq:W (3.8) BS01 peptide N/A GO:0009288 ... P0A1I7 N/A
    901244 8wkq:X (3.8) BS01 peptide N/A GO:0009288 ... P0A1I7 N/A
    901245 8wkq:Y (3.8) BS01 peptide N/A GO:0009288 ... P0A1I7 N/A
    901246 8wkq:Z (3.8) BS01 peptide N/A GO:0009288 ... P0A1I7 N/A
    901247 8wkq:a (3.8) BS01 peptide N/A GO:0009288 ... P0A1I7 N/A
    901248 8wkq:a (3.8) BS02 peptide N/A GO:0009288 ... P0A1I7 N/A
    901249 8wkr:A (2.05) BS01 LLP ? GO:0006520 ... N/A 38568076
    901250 8wkr:A (2.05) BS02 PRO ? GO:0006520 ... N/A 38568076
    901251 8wkr:B (2.05) BS01 PRO ? GO:0006520 ... N/A 38568076
    901252 8wkr:B (2.05) BS02 LLP ? GO:0006520 ... N/A 38568076
    901253 8wkr:C (2.05) BS01 LLP ? GO:0006520 ... N/A 38568076
    901254 8wkr:C (2.05) BS02 PRO ? GO:0006520 ... N/A 38568076
    901255 8wkr:D (2.05) BS01 PRO ? GO:0006520 ... N/A 38568076
    901256 8wkr:D (2.05) BS02 LLP ? GO:0006520 ... N/A 38568076
    901257 8wku:B (3.5) BS01 MAN N/A N/A A0AAE8ZFM2 38877169
    901258 8wku:B (3.5) BS02 MAN N/A N/A A0AAE8ZFM2 38877169
    901259 8wky:A (2.9) BS01 peptide N/A GO:0004930 ... P32245
    Q9V2J8
    38345933
    901260 8wky:A (2.9) BS02 CA N/A GO:0004930 ... P32245
    Q9V2J8
    38345933
    901261 8wkz:A (3.3) BS01 peptide N/A GO:0004930 ... P32245
    Q9V2J8
    38345933
    901262 8wkz:A (3.3) BS02 CA N/A GO:0004930 ... P32245
    Q9V2J8
    38345933
    901263 8wl0:A (1.789) BS01 CO N/A GO:0003868 ... P93836 N/A
    901264 8wl0:A (1.789) BS02 WIG N/A GO:0003868 ... P93836 N/A
    901265 8wl2:A0 (3.4) BS01 peptide N/A GO:0009288 ... P16437 N/A
    901266 8wl2:A0 (3.4) BS02 peptide N/A GO:0009288 ... P16437 N/A
    901267 8wl2:A5 (3.4) BS01 peptide N/A GO:0003774 ... P26462 N/A
    901268 8wl2:A6 (3.4) BS01 peptide N/A GO:0009288 ... P16437 N/A
    901269 8wl2:A6 (3.4) BS02 peptide N/A GO:0009288 ... P16437 N/A
    901270 8wl2:A7 (3.4) BS01 peptide N/A GO:0009288 ... P16437 N/A
    901271 8wl2:A7 (3.4) BS02 peptide N/A GO:0009288 ... P16437 N/A
    901272 8wl2:A8 (3.4) BS01 peptide N/A GO:0009288 ... P16437 N/A
    901273 8wl2:A8 (3.4) BS02 peptide N/A GO:0009288 ... P16437 N/A
    901274 8wl2:A9 (3.4) BS01 peptide N/A GO:0009288 ... P16437 N/A
    901275 8wl2:A9 (3.4) BS02 peptide N/A GO:0009288 ... P16437 N/A
    901276 8wl2:AA (3.4) BS01 peptide N/A GO:0009288 ... P16323 N/A
    901277 8wl2:AA (3.4) BS02 peptide N/A GO:0009288 ... P16323 N/A
    901278 8wl2:AB (3.4) BS01 peptide N/A GO:0009288 ... P16323 N/A
    901279 8wl2:AB (3.4) BS02 peptide N/A GO:0009288 ... P16323 N/A
    901280 8wl2:AC (3.4) BS01 peptide N/A GO:0009288 ... P16323 N/A
    901281 8wl2:AC (3.4) BS02 peptide N/A GO:0009288 ... P16323 N/A
    901282 8wl2:AD (3.4) BS01 peptide N/A GO:0009288 ... P16323 N/A
    901283 8wl2:AD (3.4) BS02 peptide N/A GO:0009288 ... P16323 N/A
    901284 8wl2:AE (3.4) BS01 peptide N/A GO:0009288 ... P16323 N/A
    901285 8wl2:AE (3.4) BS02 peptide N/A GO:0009288 ... P16323 N/A
    901286 8wl2:AI (3.4) BS01 peptide N/A GO:0009288 ... P0A1J3 N/A
    901287 8wl2:AV (3.4) BS01 peptide N/A GO:0003774 ... P15928 N/A
    901288 8wl2:Ao (3.4) BS01 peptide N/A GO:0003774 ... P15928 N/A
    901289 8wl2:BA (3.4) BS01 peptide N/A GO:0009288 ... P0A1I7 N/A
    901290 8wl2:BA (3.4) BS02 peptide N/A GO:0009288 ... P0A1I7 N/A
    901291 8wl2:BB (3.4) BS01 peptide N/A GO:0009288 ... P0A1I7 N/A
    901292 8wl2:BC (3.4) BS01 peptide N/A GO:0009288 ... P0A1I7 N/A
    901293 8wl2:BD (3.4) BS01 peptide N/A GO:0009288 ... P0A1I7 N/A
    901294 8wl2:BE (3.4) BS01 peptide N/A GO:0009288 ... P0A1I7 N/A
    901295 8wl2:BF (3.4) BS01 peptide N/A GO:0009288 ... P0A1I7 N/A
    901296 8wl2:BF (3.4) BS02 peptide N/A GO:0009288 ... P0A1I7 N/A
    901297 8wl7:A (1.74) BS01 ALL ? GO:0030246 ... A0A9W3L9M6 37820454
    901298 8wl9:A (1.93) BS01 RIP ? GO:0030246 ... A0A9W3L9M6 37820454
    901299 8wlb:A (1.71) BS01 WEB ? GO:0030246 ... A0A9W3L9M6 37820454
    901300 8wlh:P (3.7) BS01 peptide N/A GO:0003774 ... P26462 N/A
    901301 8wlh:Q (3.7) BS01 peptide N/A GO:0009288 ... P16437 N/A
    901302 8wlh:Q (3.7) BS02 peptide N/A GO:0009288 ... P16437 N/A
    901303 8wlh:R (3.7) BS01 peptide N/A GO:0009288 ... P16437 N/A
    901304 8wlh:R (3.7) BS02 peptide N/A GO:0009288 ... P16437 N/A
    901305 8wlh:S (3.7) BS01 peptide N/A GO:0009288 ... P16437 N/A
    901306 8wlh:S (3.7) BS02 peptide N/A GO:0009288 ... P16437 N/A
    901307 8wlh:T (3.7) BS01 peptide N/A GO:0009288 ... P16437 N/A
    901308 8wlh:T (3.7) BS02 peptide N/A GO:0009288 ... P16437 N/A
    901309 8wlh:U (3.7) BS01 peptide N/A GO:0009288 ... P16437 N/A
    901310 8wlh:U (3.7) BS02 peptide N/A GO:0009288 ... P16437 N/A
    901311 8wlh:V (3.7) BS01 peptide N/A GO:0009288 ... P0A1I7 N/A
    901312 8wlh:V (3.7) BS02 peptide N/A GO:0009288 ... P0A1I7 N/A
    901313 8wlh:W (3.7) BS01 peptide N/A GO:0009288 ... P0A1I7 N/A
    901314 8wlh:X (3.7) BS01 peptide N/A GO:0009288 ... P0A1I7 N/A
    901315 8wlh:Y (3.7) BS01 peptide N/A GO:0009288 ... P0A1I7 N/A
    901316 8wlh:Z (3.7) BS01 peptide N/A GO:0009288 ... P0A1I7 N/A
    901317 8wlh:a (3.7) BS01 peptide N/A GO:0009288 ... P0A1I7 N/A
    901318 8wlh:m (3.7) BS01 peptide N/A GO:0009288 ... P16323 N/A
    901319 8wlh:m (3.7) BS02 peptide N/A GO:0009288 ... P16323 N/A
    901320 8wlh:n (3.7) BS01 peptide N/A GO:0009288 ... P16323 N/A
    901321 8wlh:o (3.7) BS01 peptide N/A GO:0009288 ... P16323 N/A
    901322 8wlh:o (3.7) BS02 peptide N/A GO:0009288 ... P16323 N/A
    901323 8wlh:q (3.7) BS01 peptide N/A GO:0009288 ... P16323 N/A
    901324 8wlk:A (3.37) BS01 EBZ ? GO:0001975 ... Q05940 N/A
    901325 8wll:A (3.74) BS01 YHR ? GO:0001975 ... Q05940 N/A
    901326 8wlm:A (3.57) BS01 SRO ? GO:0001975 ... Q05940 N/A
    901327 8wln:4 (4.3) BS01 peptide N/A GO:0003774 ... P15928 N/A
    901328 8wln:AM (4.3) BS01 peptide N/A GO:0003774 ... P15928 N/A
    901329 8wln:P (4.3) BS01 peptide N/A GO:0003774 ... P26462 N/A
    901330 8wln:Q (4.3) BS01 peptide N/A GO:0009288 ... P16437 N/A
    901331 8wln:Q (4.3) BS02 peptide N/A GO:0009288 ... P16437 N/A
    901332 8wln:R (4.3) BS01 peptide N/A GO:0009288 ... P16437 N/A
    901333 8wln:R (4.3) BS02 peptide N/A GO:0009288 ... P16437 N/A
    901334 8wln:S (4.3) BS01 peptide N/A GO:0009288 ... P16437 N/A
    901335 8wln:S (4.3) BS02 peptide N/A GO:0009288 ... P16437 N/A
    901336 8wln:T (4.3) BS01 peptide N/A GO:0009288 ... P16437 N/A
    901337 8wln:T (4.3) BS02 peptide N/A GO:0009288 ... P16437 N/A
    901338 8wln:U (4.3) BS01 peptide N/A GO:0009288 ... P16437 N/A
    901339 8wln:U (4.3) BS02 peptide N/A GO:0009288 ... P16437 N/A
    901340 8wln:V (4.3) BS01 peptide N/A GO:0009288 ... P0A1I7 N/A
    901341 8wln:V (4.3) BS02 peptide N/A GO:0009288 ... P0A1I7 N/A
    901342 8wln:W (4.3) BS01 peptide N/A GO:0009288 ... P0A1I7 N/A
    901343 8wln:X (4.3) BS01 peptide N/A GO:0009288 ... P0A1I7 N/A
    901344 8wln:Y (4.3) BS01 peptide N/A GO:0009288 ... P0A1I7 N/A
    901345 8wln:Z (4.3) BS01 peptide N/A GO:0009288 ... P0A1I7 N/A
    901346 8wln:a (4.3) BS01 peptide N/A GO:0009288 ... P0A1I7 N/A
    901347 8wln:x (4.3) BS01 peptide N/A GO:0003774 ... P15928 N/A
    901348 8wlo:E (2.62) BS01 ZN N/A GO:0006508 ... N/A 38591877
    901349 8wlq:P (3.8) BS01 peptide N/A GO:0003774 ... P26462 N/A
    901350 8wlq:Q (3.8) BS01 peptide N/A GO:0009288 ... P16437 N/A
    901351 8wlq:Q (3.8) BS02 peptide N/A GO:0009288 ... P16437 N/A
    901352 8wlq:R (3.8) BS01 peptide N/A GO:0009288 ... P16437 N/A
    901353 8wlq:R (3.8) BS02 peptide N/A GO:0009288 ... P16437 N/A
    901354 8wlq:S (3.8) BS01 peptide N/A GO:0009288 ... P16437 N/A
    901355 8wlq:S (3.8) BS02 peptide N/A GO:0009288 ... P16437 N/A
    901356 8wlq:T (3.8) BS01 peptide N/A GO:0009288 ... P16437 N/A
    901357 8wlq:T (3.8) BS02 peptide N/A GO:0009288 ... P16437 N/A
    901358 8wlq:U (3.8) BS01 peptide N/A GO:0009288 ... P16437 N/A
    901359 8wlq:U (3.8) BS02 peptide N/A GO:0009288 ... P16437 N/A
    901360 8wlq:V (3.8) BS01 peptide N/A GO:0009288 ... P0A1I7 N/A
    901361 8wlq:V (3.8) BS02 peptide N/A GO:0009288 ... P0A1I7 N/A
    901362 8wlq:W (3.8) BS01 peptide N/A GO:0009288 ... P0A1I7 N/A
    901363 8wlq:X (3.8) BS01 peptide N/A GO:0009288 ... P0A1I7 N/A
    901364 8wlq:Y (3.8) BS01 peptide N/A GO:0009288 ... P0A1I7 N/A
    901365 8wlq:Z (3.8) BS01 peptide N/A GO:0009288 ... P0A1I7 N/A
    901366 8wlq:a (3.8) BS01 peptide N/A GO:0009288 ... P0A1I7 N/A
    901367 8wlq:m (3.8) BS01 peptide N/A GO:0009288 ... P16323 N/A
    901368 8wlq:m (3.8) BS02 peptide N/A GO:0009288 ... P16323 N/A
    901369 8wlq:n (3.8) BS01 peptide N/A GO:0009288 ... P16323 N/A
    901370 8wlq:o (3.8) BS01 peptide N/A GO:0009288 ... P16323 N/A
    901371 8wlq:o (3.8) BS02 peptide N/A GO:0009288 ... P16323 N/A
    901372 8wlq:q (3.8) BS01 peptide N/A GO:0009288 ... P16323 N/A
    901373 8wlr:A (3.12) BS01 ZN N/A GO:0006508 ... N/A 38591877
    901374 8wls:A (-1.00) BS01 peptide ? GO:0042981 ... Q07817 38377677
    901375 8wlt:A0 (4.1) BS01 peptide N/A GO:0009288 ... P16437 N/A
    901376 8wlt:A0 (4.1) BS02 peptide N/A GO:0009288 ... P16437 N/A
    901377 8wlt:A5 (4.1) BS01 peptide N/A GO:0003774 ... P26462 N/A
    901378 8wlt:A6 (4.1) BS01 peptide N/A GO:0009288 ... P16437 N/A
    901379 8wlt:A6 (4.1) BS02 peptide N/A GO:0009288 ... P16437 N/A
    901380 8wlt:A7 (4.1) BS01 peptide N/A GO:0009288 ... P16437 N/A
    901381 8wlt:A7 (4.1) BS02 peptide N/A GO:0009288 ... P16437 N/A
    901382 8wlt:A8 (4.1) BS01 peptide N/A GO:0009288 ... P16437 N/A
    901383 8wlt:A8 (4.1) BS02 peptide N/A GO:0009288 ... P16437 N/A
    901384 8wlt:A9 (4.1) BS01 peptide N/A GO:0009288 ... P16437 N/A
    901385 8wlt:A9 (4.1) BS02 peptide N/A GO:0009288 ... P16437 N/A
    901386 8wlt:AA (4.1) BS01 peptide N/A GO:0009288 ... P16323 N/A
    901387 8wlt:AA (4.1) BS02 peptide N/A GO:0009288 ... P16323 N/A
    901388 8wlt:AB (4.1) BS01 peptide N/A GO:0009288 ... P16323 N/A
    901389 8wlt:AC (4.1) BS01 peptide N/A GO:0009288 ... P16323 N/A
    901390 8wlt:AC (4.1) BS02 peptide N/A GO:0009288 ... P16323 N/A
    901391 8wlt:AE (4.1) BS01 peptide N/A GO:0009288 ... P16323 N/A
    901392 8wlt:AV (4.1) BS01 peptide N/A GO:0003774 ... P15928 N/A
    901393 8wlt:Ao (4.1) BS01 peptide N/A GO:0003774 ... P15928 N/A
    901394 8wlt:BA (4.1) BS01 peptide N/A GO:0009288 ... P0A1I7 N/A
    901395 8wlt:BA (4.1) BS02 peptide N/A GO:0009288 ... P0A1I7 N/A
    901396 8wlt:BB (4.1) BS01 peptide N/A GO:0009288 ... P0A1I7 N/A
    901397 8wlt:BC (4.1) BS01 peptide N/A GO:0009288 ... P0A1I7 N/A
    901398 8wlt:BD (4.1) BS01 peptide N/A GO:0009288 ... P0A1I7 N/A
    901399 8wlt:BE (4.1) BS01 peptide N/A GO:0009288 ... P0A1I7 N/A
    901400 8wlt:BF (4.1) BS01 peptide N/A GO:0009288 ... P0A1I7 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).