SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 4499 4500 4501 4502 4503 4504 4505 4506 4507 4508 4509 4510 4511 4512 4513 4514 4515 4516 4517 4518 4519 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    901601 8vop:4 (6.0) BS01 rna N/A GO:0000027 ... P68919 N/A
    901602 8vop:9 (6.0) BS01 rna N/A GO:0002181 ... P0A7J3 N/A
    901603 8vop:AA (6.0) BS01 dna N/A GO:0000345 ... P0A8V2 N/A
    901604 8vop:AA (6.0) BS02 dna N/A GO:0000345 ... P0A8V2 N/A
    901605 8vop:AA (6.0) BS03 rna N/A GO:0000345 ... P0A8V2 N/A
    901606 8vop:AE (6.0) BS01 dna N/A GO:0000287 ... P0A8T7 N/A
    901607 8vop:AE (6.0) BS02 dna N/A GO:0000287 ... P0A8T7 N/A
    901608 8vop:AE (6.0) BS03 rna N/A GO:0000287 ... P0A8T7 N/A
    901609 8vop:AE (6.0) BS04 MG N/A GO:0000287 ... P0A8T7 N/A
    901610 8vop:AE (6.0) BS05 ZN N/A GO:0000287 ... P0A8T7 N/A
    901611 8vop:AE (6.0) BS06 ZN N/A GO:0000287 ... P0A8T7 N/A
    901612 8vop:C (6.0) BS01 rna N/A GO:0002181 ... P0A7T7 N/A
    901613 8vop:E (6.0) BS01 rna N/A GO:0000028 ... P0A7U7 N/A
    901614 8vop:F (6.0) BS01 rna N/A GO:0000028 ... P68679 N/A
    901615 8vop:G (6.0) BS01 rna N/A GO:0000028 ... P0A7V0 N/A
    901616 8vop:I (6.0) BS01 rna N/A GO:0000028 ... P0A7V3 N/A
    901617 8vop:I (6.0) BS02 rna N/A GO:0000028 ... P0A7V3 N/A
    901618 8vop:J (6.0) BS01 rna N/A GO:0000028 ... P0A7V8 N/A
    901619 8vop:K (6.0) BS01 rna N/A GO:0000028 ... P0A7W1 N/A
    901620 8vop:K (6.0) BS02 rna N/A GO:0000028 ... P0A7W1 N/A
    901621 8vop:L (6.0) BS01 rna N/A GO:0002181 ... P02358 N/A
    901622 8vop:M (6.0) BS01 rna N/A GO:0000028 ... P02359 N/A
    901623 8vop:M (6.0) BS02 rna N/A GO:0000028 ... P02359 N/A
    901624 8vop:N (6.0) BS01 rna N/A GO:0000028 ... P0A7W7 N/A
    901625 8vop:O (6.0) BS01 rna N/A GO:0002181 ... P0A7X3 N/A
    901626 8vop:P (6.0) BS01 rna N/A GO:0000049 ... P0A7R5 N/A
    901627 8vop:Q (6.0) BS01 rna N/A GO:0002181 ... P0A7R9 N/A
    901628 8vop:R (6.0) BS01 rna N/A GO:0000049 ... P0A7S3 N/A
    901629 8vop:S (6.0) BS01 rna N/A GO:0000028 ... P0AG59 N/A
    901630 8vop:T (6.0) BS01 rna N/A GO:0000028 ... P0ADZ4 N/A
    901631 8vop:T (6.0) BS02 rna N/A GO:0000028 ... P0ADZ4 N/A
    901632 8vop:U (6.0) BS01 rna N/A GO:0000028 ... P0A7T3 N/A
    901633 8vop:V (6.0) BS01 rna N/A GO:0000028 ... P0AG63 N/A
    901634 8vop:W (6.0) BS01 rna N/A GO:0002181 ... P0A7U3 N/A
    901635 8vop:X (6.0) BS01 rna N/A GO:0000049 ... P0A7S9 N/A
    901636 8vop:X (6.0) BS02 rna N/A GO:0000049 ... P0A7S9 N/A
    901637 8vop:b (6.0) BS01 rna N/A GO:0000027 ... P0A7L8 N/A
    901638 8vop:b (6.0) BS02 rna N/A GO:0000027 ... P0A7L8 N/A
    901639 8vop:c (6.0) BS01 rna N/A GO:0000027 ... P0A7M2 N/A
    901640 8vop:e (6.0) BS01 rna N/A GO:0000027 ... P0A7M6 N/A
    901641 8vop:f (6.0) BS01 rna N/A GO:0000027 ... P0AG51 N/A
    901642 8vop:f (6.0) BS02 rna N/A GO:0000027 ... P0AG51 N/A
    901643 8vop:g (6.0) BS01 rna N/A GO:0002181 ... P0A7M9 N/A
    901644 8vop:h (6.0) BS01 rna N/A GO:0000027 ... P60422 N/A
    901645 8vop:i (6.0) BS01 rna N/A GO:0000027 ... P0A7N4 N/A
    901646 8vop:j (6.0) BS01 rna N/A GO:0000027 ... P60438 N/A
    901647 8vop:k (6.0) BS01 rna N/A GO:0000027 ... P0A7N9 N/A
    901648 8vop:l (6.0) BS01 rna N/A GO:0001070 ... P60723 N/A
    901649 8vop:m (6.0) BS01 rna N/A GO:0002181 ... P0A7P5 N/A
    901650 8vop:n (6.0) BS01 rna N/A GO:0000027 ... P62399 N/A
    901651 8vop:n (6.0) BS02 rna N/A GO:0000027 ... P62399 N/A
    901652 8vop:o (6.0) BS01 rna N/A GO:0002181 ... P0A7Q1 N/A
    901653 8vop:p (6.0) BS01 rna N/A GO:0000027 ... P0AG55 N/A
    901654 8vop:q (6.0) BS01 rna N/A GO:0002181 ... P0A7Q6 N/A
    901655 8vop:r (6.0) BS01 rna N/A GO:0002181 ... P0A7R1 N/A
    901656 8vop:s (6.0) BS01 rna N/A GO:0002181 ... P0AA10 N/A
    901657 8vop:t (6.0) BS01 rna N/A GO:0002181 ... P0ADY3 N/A
    901658 8vop:t (6.0) BS02 rna N/A GO:0002181 ... P0ADY3 N/A
    901659 8vop:u (6.0) BS01 rna N/A GO:0002181 ... P02413 N/A
    901660 8vop:v (6.0) BS01 rna N/A GO:0000027 ... P0ADY7 N/A
    901661 8vop:v (6.0) BS02 rna N/A GO:0000027 ... P0ADY7 N/A
    901662 8vop:w (6.0) BS01 rna N/A GO:0000027 ... P0AG44 N/A
    901663 8vop:x (6.0) BS01 rna N/A GO:0002181 ... P0C018 N/A
    901664 8vop:x (6.0) BS02 rna N/A GO:0002181 ... P0C018 N/A
    901665 8vop:y (6.0) BS01 rna N/A GO:0000027 ... P0A7K6 N/A
    901666 8vop:z (6.0) BS01 rna N/A GO:0000027 ... P0A7L3 N/A
    901667 8voq:0 (9.3) BS01 rna N/A GO:0002181 ... P0AG48 N/A
    901668 8voq:1 (9.3) BS01 rna N/A GO:0002181 ... P61175 N/A
    901669 8voq:2 (9.3) BS01 rna N/A GO:0000027 ... P0ADZ0 N/A
    901670 8voq:3 (9.3) BS01 rna N/A GO:0000027 ... P60624 N/A
    901671 8voq:4 (9.3) BS01 rna N/A GO:0000027 ... P68919 N/A
    901672 8voq:9 (9.3) BS01 rna N/A GO:0002181 ... P0A7J3 N/A
    901673 8voq:AA (9.3) BS01 dna N/A GO:0000345 ... P0A8V2 N/A
    901674 8voq:AA (9.3) BS02 dna N/A GO:0000345 ... P0A8V2 N/A
    901675 8voq:AA (9.3) BS03 rna N/A GO:0000345 ... P0A8V2 N/A
    901676 8voq:AB (9.3) BS01 rna N/A GO:0005515 ... P0AFG0 N/A
    901677 8voq:AE (9.3) BS01 dna N/A GO:0000287 ... P0A8T7 N/A
    901678 8voq:AE (9.3) BS02 dna N/A GO:0000287 ... P0A8T7 N/A
    901679 8voq:AE (9.3) BS03 rna N/A GO:0000287 ... P0A8T7 N/A
    901680 8voq:AE (9.3) BS04 MG N/A GO:0000287 ... P0A8T7 N/A
    901681 8voq:AE (9.3) BS05 ZN N/A GO:0000287 ... P0A8T7 N/A
    901682 8voq:AE (9.3) BS06 ZN N/A GO:0000287 ... P0A8T7 N/A
    901683 8voq:AG (9.3) BS01 rna N/A GO:0000166 ... P0AFF6 N/A
    901684 8voq:C (9.3) BS01 rna N/A GO:0002181 ... P0A7T7 N/A
    901685 8voq:E (9.3) BS01 rna N/A GO:0000028 ... P0A7U7 N/A
    901686 8voq:F (9.3) BS01 rna N/A GO:0000028 ... P68679 N/A
    901687 8voq:G (9.3) BS01 rna N/A GO:0000028 ... P0A7V0 N/A
    901688 8voq:I (9.3) BS01 rna N/A GO:0000028 ... P0A7V3 N/A
    901689 8voq:I (9.3) BS02 rna N/A GO:0000028 ... P0A7V3 N/A
    901690 8voq:J (9.3) BS01 rna N/A GO:0000028 ... P0A7V8 N/A
    901691 8voq:K (9.3) BS01 rna N/A GO:0000028 ... P0A7W1 N/A
    901692 8voq:K (9.3) BS02 rna N/A GO:0000028 ... P0A7W1 N/A
    901693 8voq:L (9.3) BS01 rna N/A GO:0002181 ... P02358 N/A
    901694 8voq:M (9.3) BS01 rna N/A GO:0000028 ... P02359 N/A
    901695 8voq:M (9.3) BS02 rna N/A GO:0000028 ... P02359 N/A
    901696 8voq:N (9.3) BS01 rna N/A GO:0000028 ... P0A7W7 N/A
    901697 8voq:O (9.3) BS01 rna N/A GO:0002181 ... P0A7X3 N/A
    901698 8voq:P (9.3) BS01 rna N/A GO:0000049 ... P0A7R5 N/A
    901699 8voq:Q (9.3) BS01 rna N/A GO:0002181 ... P0A7R9 N/A
    901700 8voq:R (9.3) BS01 rna N/A GO:0000049 ... P0A7S3 N/A
    901701 8voq:S (9.3) BS01 rna N/A GO:0000028 ... P0AG59 N/A
    901702 8voq:T (9.3) BS01 rna N/A GO:0000028 ... P0ADZ4 N/A
    901703 8voq:T (9.3) BS02 rna N/A GO:0000028 ... P0ADZ4 N/A
    901704 8voq:U (9.3) BS01 rna N/A GO:0000028 ... P0A7T3 N/A
    901705 8voq:V (9.3) BS01 rna N/A GO:0000028 ... P0AG63 N/A
    901706 8voq:W (9.3) BS01 rna N/A GO:0002181 ... P0A7U3 N/A
    901707 8voq:X (9.3) BS01 rna N/A GO:0000049 ... P0A7S9 N/A
    901708 8voq:X (9.3) BS02 rna N/A GO:0000049 ... P0A7S9 N/A
    901709 8voq:b (9.3) BS01 rna N/A GO:0000027 ... P0A7L8 N/A
    901710 8voq:b (9.3) BS02 rna N/A GO:0000027 ... P0A7L8 N/A
    901711 8voq:c (9.3) BS01 rna N/A GO:0000027 ... P0A7M2 N/A
    901712 8voq:e (9.3) BS01 rna N/A GO:0000027 ... P0A7M6 N/A
    901713 8voq:f (9.3) BS01 rna N/A GO:0000027 ... P0AG51 N/A
    901714 8voq:f (9.3) BS02 rna N/A GO:0000027 ... P0AG51 N/A
    901715 8voq:g (9.3) BS01 rna N/A GO:0002181 ... P0A7M9 N/A
    901716 8voq:h (9.3) BS01 rna N/A GO:0000027 ... P60422 N/A
    901717 8voq:i (9.3) BS01 rna N/A GO:0000027 ... P0A7N4 N/A
    901718 8voq:j (9.3) BS01 rna N/A GO:0000027 ... P60438 N/A
    901719 8voq:k (9.3) BS01 rna N/A GO:0000027 ... P0A7N9 N/A
    901720 8voq:l (9.3) BS01 rna N/A GO:0001070 ... P60723 N/A
    901721 8voq:m (9.3) BS01 rna N/A GO:0002181 ... P0A7P5 N/A
    901722 8voq:n (9.3) BS01 rna N/A GO:0000027 ... P62399 N/A
    901723 8voq:n (9.3) BS02 rna N/A GO:0000027 ... P62399 N/A
    901724 8voq:o (9.3) BS01 rna N/A GO:0002181 ... P0A7Q1 N/A
    901725 8voq:p (9.3) BS01 rna N/A GO:0000027 ... P0AG55 N/A
    901726 8voq:q (9.3) BS01 rna N/A GO:0002181 ... P0A7Q6 N/A
    901727 8voq:r (9.3) BS01 rna N/A GO:0002181 ... P0A7R1 N/A
    901728 8voq:s (9.3) BS01 rna N/A GO:0002181 ... P0AA10 N/A
    901729 8voq:t (9.3) BS01 rna N/A GO:0002181 ... P0ADY3 N/A
    901730 8voq:t (9.3) BS02 rna N/A GO:0002181 ... P0ADY3 N/A
    901731 8voq:u (9.3) BS01 rna N/A GO:0002181 ... P02413 N/A
    901732 8voq:v (9.3) BS01 rna N/A GO:0000027 ... P0ADY7 N/A
    901733 8voq:v (9.3) BS02 rna N/A GO:0000027 ... P0ADY7 N/A
    901734 8voq:w (9.3) BS01 rna N/A GO:0000027 ... P0AG44 N/A
    901735 8voq:x (9.3) BS01 rna N/A GO:0002181 ... P0C018 N/A
    901736 8voq:x (9.3) BS02 rna N/A GO:0002181 ... P0C018 N/A
    901737 8voq:y (9.3) BS01 rna N/A GO:0000027 ... P0A7K6 N/A
    901738 8voq:z (9.3) BS01 rna N/A GO:0000027 ... P0A7L3 N/A
    901739 8vor:0 (3.6) BS01 rna N/A GO:0002181 ... P0AG48 N/A
    901740 8vor:1 (3.6) BS01 rna N/A GO:0002181 ... P61175 N/A
    901741 8vor:2 (3.6) BS01 rna N/A GO:0000027 ... P0ADZ0 N/A
    901742 8vor:3 (3.6) BS01 rna N/A GO:0000027 ... P60624 N/A
    901743 8vor:4 (3.6) BS01 rna N/A GO:0000027 ... P68919 N/A
    901744 8vor:9 (3.6) BS01 rna N/A GO:0002181 ... P0A7J3 N/A
    901745 8vor:AA (3.6) BS01 dna N/A GO:0000345 ... P0A8V2 N/A
    901746 8vor:AA (3.6) BS02 dna N/A GO:0000345 ... P0A8V2 N/A
    901747 8vor:AA (3.6) BS03 rna N/A GO:0000345 ... P0A8V2 N/A
    901748 8vor:AB (3.6) BS01 rna N/A GO:0005515 ... P0AFG0 N/A
    901749 8vor:AE (3.6) BS01 dna N/A GO:0000287 ... P0A8T7 N/A
    901750 8vor:AE (3.6) BS02 dna N/A GO:0000287 ... P0A8T7 N/A
    901751 8vor:AE (3.6) BS03 rna N/A GO:0000287 ... P0A8T7 N/A
    901752 8vor:AE (3.6) BS04 MG N/A GO:0000287 ... P0A8T7 N/A
    901753 8vor:AE (3.6) BS05 ZN N/A GO:0000287 ... P0A8T7 N/A
    901754 8vor:AE (3.6) BS06 ZN N/A GO:0000287 ... P0A8T7 N/A
    901755 8vor:C (3.6) BS01 rna N/A GO:0002181 ... P0A7T7 N/A
    901756 8vor:E (3.6) BS01 rna N/A GO:0000028 ... P0A7U7 N/A
    901757 8vor:F (3.6) BS01 rna N/A GO:0000028 ... P68679 N/A
    901758 8vor:G (3.6) BS01 rna N/A GO:0000028 ... P0A7V0 N/A
    901759 8vor:I (3.6) BS01 rna N/A GO:0000028 ... P0A7V3 N/A
    901760 8vor:I (3.6) BS02 rna N/A GO:0000028 ... P0A7V3 N/A
    901761 8vor:J (3.6) BS01 rna N/A GO:0000028 ... P0A7V8 N/A
    901762 8vor:K (3.6) BS01 rna N/A GO:0000028 ... P0A7W1 N/A
    901763 8vor:K (3.6) BS02 rna N/A GO:0000028 ... P0A7W1 N/A
    901764 8vor:L (3.6) BS01 rna N/A GO:0002181 ... P02358 N/A
    901765 8vor:M (3.6) BS01 rna N/A GO:0000028 ... P02359 N/A
    901766 8vor:M (3.6) BS02 rna N/A GO:0000028 ... P02359 N/A
    901767 8vor:N (3.6) BS01 rna N/A GO:0000028 ... P0A7W7 N/A
    901768 8vor:O (3.6) BS01 rna N/A GO:0002181 ... P0A7X3 N/A
    901769 8vor:P (3.6) BS01 rna N/A GO:0000049 ... P0A7R5 N/A
    901770 8vor:Q (3.6) BS01 rna N/A GO:0002181 ... P0A7R9 N/A
    901771 8vor:R (3.6) BS01 rna N/A GO:0000049 ... P0A7S3 N/A
    901772 8vor:S (3.6) BS01 rna N/A GO:0000028 ... P0AG59 N/A
    901773 8vor:T (3.6) BS01 rna N/A GO:0000028 ... P0ADZ4 N/A
    901774 8vor:T (3.6) BS02 rna N/A GO:0000028 ... P0ADZ4 N/A
    901775 8vor:U (3.6) BS01 rna N/A GO:0000028 ... P0A7T3 N/A
    901776 8vor:V (3.6) BS01 rna N/A GO:0000028 ... P0AG63 N/A
    901777 8vor:W (3.6) BS01 rna N/A GO:0002181 ... P0A7U3 N/A
    901778 8vor:X (3.6) BS01 rna N/A GO:0000049 ... P0A7S9 N/A
    901779 8vor:X (3.6) BS02 rna N/A GO:0000049 ... P0A7S9 N/A
    901780 8vor:b (3.6) BS01 rna N/A GO:0000027 ... P0A7L8 N/A
    901781 8vor:b (3.6) BS02 rna N/A GO:0000027 ... P0A7L8 N/A
    901782 8vor:c (3.6) BS01 rna N/A GO:0000027 ... P0A7M2 N/A
    901783 8vor:e (3.6) BS01 rna N/A GO:0000027 ... P0A7M6 N/A
    901784 8vor:f (3.6) BS01 rna N/A GO:0000027 ... P0AG51 N/A
    901785 8vor:f (3.6) BS02 rna N/A GO:0000027 ... P0AG51 N/A
    901786 8vor:g (3.6) BS01 rna N/A GO:0002181 ... P0A7M9 N/A
    901787 8vor:h (3.6) BS01 rna N/A GO:0000027 ... P60422 N/A
    901788 8vor:i (3.6) BS01 rna N/A GO:0000027 ... P0A7N4 N/A
    901789 8vor:j (3.6) BS01 rna N/A GO:0000027 ... P60438 N/A
    901790 8vor:k (3.6) BS01 rna N/A GO:0000027 ... P0A7N9 N/A
    901791 8vor:l (3.6) BS01 rna N/A GO:0001070 ... P60723 N/A
    901792 8vor:m (3.6) BS01 rna N/A GO:0002181 ... P0A7P5 N/A
    901793 8vor:n (3.6) BS01 rna N/A GO:0000027 ... P62399 N/A
    901794 8vor:n (3.6) BS02 rna N/A GO:0000027 ... P62399 N/A
    901795 8vor:o (3.6) BS01 rna N/A GO:0002181 ... P0A7Q1 N/A
    901796 8vor:p (3.6) BS01 rna N/A GO:0000027 ... P0AG55 N/A
    901797 8vor:q (3.6) BS01 rna N/A GO:0002181 ... P0A7Q6 N/A
    901798 8vor:r (3.6) BS01 rna N/A GO:0002181 ... P0A7R1 N/A
    901799 8vor:s (3.6) BS01 rna N/A GO:0002181 ... P0AA10 N/A
    901800 8vor:t (3.6) BS01 rna N/A GO:0002181 ... P0ADY3 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).