SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    902201 8wmj:i (3.0) BS08 CLA N/A GO:0009765 ... N/A 38734819
    902202 8wmj:i (3.0) BS09 KC2 N/A GO:0009765 ... N/A 38734819
    902203 8wmj:i (3.0) BS10 CLA N/A GO:0009765 ... N/A 38734819
    902204 8wmj:i (3.0) BS11 CLA N/A GO:0009765 ... N/A 38734819
    902205 8wmj:i (3.0) BS12 II0 N/A GO:0009765 ... N/A 38734819
    902206 8wmj:i (3.0) BS13 II0 N/A GO:0009765 ... N/A 38734819
    902207 8wmj:i (3.0) BS14 II0 N/A GO:0009765 ... N/A 38734819
    902208 8wmj:i (3.0) BS15 WVN N/A GO:0009765 ... N/A 38734819
    902209 8wmj:i (3.0) BS16 II0 N/A GO:0009765 ... N/A 38734819
    902210 8wmj:i (3.0) BS17 KC2 N/A GO:0009765 ... N/A 38734819
    902211 8wmj:i (3.0) BS18 II0 N/A GO:0009765 ... N/A 38734819
    902212 8wmj:i (3.0) BS19 CLA N/A GO:0009765 ... N/A 38734819
    902213 8wmj:i (3.0) BS20 CLA N/A GO:0009765 ... N/A 38734819
    902214 8wmj:i (3.0) BS21 CLA N/A GO:0009765 ... N/A 38734819
    902215 8wmj:i (3.0) BS22 CLA N/A GO:0009765 ... N/A 38734819
    902216 8wmj:j (3.0) BS01 CLA N/A GO:0009765 ... N/A 38734819
    902217 8wmj:j (3.0) BS02 II0 N/A GO:0009765 ... N/A 38734819
    902218 8wmj:j (3.0) BS03 WVN N/A GO:0009765 ... N/A 38734819
    902219 8wmj:j (3.0) BS04 II0 N/A GO:0009765 ... N/A 38734819
    902220 8wmj:j (3.0) BS05 CLA N/A GO:0009765 ... N/A 38734819
    902221 8wmj:j (3.0) BS06 CLA N/A GO:0009765 ... N/A 38734819
    902222 8wmj:j (3.0) BS07 CLA N/A GO:0009765 ... N/A 38734819
    902223 8wmj:j (3.0) BS08 CLA N/A GO:0009765 ... N/A 38734819
    902224 8wmj:j (3.0) BS09 CLA N/A GO:0009765 ... N/A 38734819
    902225 8wmj:j (3.0) BS10 CLA N/A GO:0009765 ... N/A 38734819
    902226 8wmj:j (3.0) BS11 CLA N/A GO:0009765 ... N/A 38734819
    902227 8wmj:j (3.0) BS12 CLA N/A GO:0009765 ... N/A 38734819
    902228 8wmj:j (3.0) BS13 CLA N/A GO:0009765 ... N/A 38734819
    902229 8wmj:j (3.0) BS14 KC2 N/A GO:0009765 ... N/A 38734819
    902230 8wmj:j (3.0) BS15 CLA N/A GO:0009765 ... N/A 38734819
    902231 8wmj:j (3.0) BS16 CLA N/A GO:0009765 ... N/A 38734819
    902232 8wmj:j (3.0) BS17 II0 N/A GO:0009765 ... N/A 38734819
    902233 8wmj:j (3.0) BS18 II0 N/A GO:0009765 ... N/A 38734819
    902234 8wmj:j (3.0) BS19 II0 N/A GO:0009765 ... N/A 38734819
    902235 8wmj:j (3.0) BS20 IHT N/A GO:0009765 ... N/A 38734819
    902236 8wmj:k (3.0) BS01 CLA N/A GO:0009765 ... N/A 38734819
    902237 8wmj:k (3.0) BS02 CLA N/A GO:0009765 ... N/A 38734819
    902238 8wmj:k (3.0) BS03 CLA N/A GO:0009765 ... N/A 38734819
    902239 8wmj:k (3.0) BS04 CLA N/A GO:0009765 ... N/A 38734819
    902240 8wmj:k (3.0) BS05 CLA N/A GO:0009765 ... N/A 38734819
    902241 8wmj:k (3.0) BS06 CLA N/A GO:0009765 ... N/A 38734819
    902242 8wmj:k (3.0) BS07 CLA N/A GO:0009765 ... N/A 38734819
    902243 8wmj:k (3.0) BS08 CLA N/A GO:0009765 ... N/A 38734819
    902244 8wmj:k (3.0) BS09 CLA N/A GO:0009765 ... N/A 38734819
    902245 8wmj:k (3.0) BS10 CLA N/A GO:0009765 ... N/A 38734819
    902246 8wmj:k (3.0) BS11 KC2 N/A GO:0009765 ... N/A 38734819
    902247 8wmj:k (3.0) BS12 KC2 N/A GO:0009765 ... N/A 38734819
    902248 8wmj:k (3.0) BS13 KC2 N/A GO:0009765 ... N/A 38734819
    902249 8wmj:k (3.0) BS14 CLA N/A GO:0009765 ... N/A 38734819
    902250 8wmj:k (3.0) BS15 II0 N/A GO:0009765 ... N/A 38734819
    902251 8wmj:k (3.0) BS16 II0 N/A GO:0009765 ... N/A 38734819
    902252 8wmj:k (3.0) BS17 II0 N/A GO:0009765 ... N/A 38734819
    902253 8wmj:k (3.0) BS18 IHT N/A GO:0009765 ... N/A 38734819
    902254 8wmj:k (3.0) BS19 II0 N/A GO:0009765 ... N/A 38734819
    902255 8wmj:k (3.0) BS20 CLA N/A GO:0009765 ... N/A 38734819
    902256 8wmj:k (3.0) BS21 II0 N/A GO:0009765 ... N/A 38734819
    902257 8wmj:k (3.0) BS22 IHT N/A GO:0009765 ... N/A 38734819
    902258 8wmj:l (3.0) BS01 CLA N/A GO:0009765 ... N/A 38734819
    902259 8wmj:l (3.0) BS02 CLA N/A GO:0009765 ... N/A 38734819
    902260 8wmj:l (3.0) BS03 II0 N/A GO:0009765 ... N/A 38734819
    902261 8wmj:l (3.0) BS04 WVN N/A GO:0009765 ... N/A 38734819
    902262 8wmj:l (3.0) BS05 CLA N/A GO:0009765 ... N/A 38734819
    902263 8wmj:l (3.0) BS06 CLA N/A GO:0009765 ... N/A 38734819
    902264 8wmj:l (3.0) BS07 CLA N/A GO:0009765 ... N/A 38734819
    902265 8wmj:l (3.0) BS08 CLA N/A GO:0009765 ... N/A 38734819
    902266 8wmj:l (3.0) BS09 CLA N/A GO:0009765 ... N/A 38734819
    902267 8wmj:l (3.0) BS10 CLA N/A GO:0009765 ... N/A 38734819
    902268 8wmj:l (3.0) BS11 CLA N/A GO:0009765 ... N/A 38734819
    902269 8wmj:l (3.0) BS12 CLA N/A GO:0009765 ... N/A 38734819
    902270 8wmj:l (3.0) BS13 KC2 N/A GO:0009765 ... N/A 38734819
    902271 8wmj:l (3.0) BS14 CLA N/A GO:0009765 ... N/A 38734819
    902272 8wmj:l (3.0) BS15 II0 N/A GO:0009765 ... N/A 38734819
    902273 8wmj:l (3.0) BS16 II0 N/A GO:0009765 ... N/A 38734819
    902274 8wmj:l (3.0) BS17 WVN N/A GO:0009765 ... N/A 38734819
    902275 8wmj:l (3.0) BS18 II0 N/A GO:0009765 ... N/A 38734819
    902276 8wmj:m (3.0) BS01 CLA N/A GO:0009765 ... N/A 38734819
    902277 8wmj:m (3.0) BS02 CLA N/A GO:0009765 ... N/A 38734819
    902278 8wmj:m (3.0) BS03 CLA N/A GO:0009765 ... N/A 38734819
    902279 8wmj:m (3.0) BS04 CLA N/A GO:0009765 ... N/A 38734819
    902280 8wmj:m (3.0) BS05 CLA N/A GO:0009765 ... N/A 38734819
    902281 8wmj:m (3.0) BS06 CLA N/A GO:0009765 ... N/A 38734819
    902282 8wmj:m (3.0) BS07 CLA N/A GO:0009765 ... N/A 38734819
    902283 8wmj:m (3.0) BS08 CLA N/A GO:0009765 ... N/A 38734819
    902284 8wmj:m (3.0) BS09 CLA N/A GO:0009765 ... N/A 38734819
    902285 8wmj:m (3.0) BS10 CLA N/A GO:0009765 ... N/A 38734819
    902286 8wmj:m (3.0) BS11 CLA N/A GO:0009765 ... N/A 38734819
    902287 8wmj:m (3.0) BS12 KC2 N/A GO:0009765 ... N/A 38734819
    902288 8wmj:m (3.0) BS13 CLA N/A GO:0009765 ... N/A 38734819
    902289 8wmj:m (3.0) BS14 CLA N/A GO:0009765 ... N/A 38734819
    902290 8wmj:m (3.0) BS15 II0 N/A GO:0009765 ... N/A 38734819
    902291 8wmj:m (3.0) BS16 II0 N/A GO:0009765 ... N/A 38734819
    902292 8wmj:m (3.0) BS17 IHT N/A GO:0009765 ... N/A 38734819
    902293 8wmj:m (3.0) BS18 II0 N/A GO:0009765 ... N/A 38734819
    902294 8wmj:m (3.0) BS19 II0 N/A GO:0009765 ... N/A 38734819
    902295 8wmj:m (3.0) BS20 CLA N/A GO:0009765 ... N/A 38734819
    902296 8wmj:m (3.0) BS21 II0 N/A GO:0009765 ... N/A 38734819
    902297 8wmj:n (3.0) BS01 CLA N/A GO:0009765 ... N/A 38734819
    902298 8wmj:n (3.0) BS02 IHT N/A GO:0009765 ... N/A 38734819
    902299 8wmj:n (3.0) BS03 II0 N/A GO:0009765 ... N/A 38734819
    902300 8wmj:n (3.0) BS04 CLA N/A GO:0009765 ... N/A 38734819
    902301 8wmj:n (3.0) BS05 CLA N/A GO:0009765 ... N/A 38734819
    902302 8wmj:n (3.0) BS06 CLA N/A GO:0009765 ... N/A 38734819
    902303 8wmj:n (3.0) BS07 CLA N/A GO:0009765 ... N/A 38734819
    902304 8wmj:n (3.0) BS08 CLA N/A GO:0009765 ... N/A 38734819
    902305 8wmj:n (3.0) BS09 CLA N/A GO:0009765 ... N/A 38734819
    902306 8wmj:n (3.0) BS10 CLA N/A GO:0009765 ... N/A 38734819
    902307 8wmj:n (3.0) BS11 CLA N/A GO:0009765 ... N/A 38734819
    902308 8wmj:n (3.0) BS12 CLA N/A GO:0009765 ... N/A 38734819
    902309 8wmj:n (3.0) BS13 CLA N/A GO:0009765 ... N/A 38734819
    902310 8wmj:n (3.0) BS14 KC2 N/A GO:0009765 ... N/A 38734819
    902311 8wmj:n (3.0) BS15 KC2 N/A GO:0009765 ... N/A 38734819
    902312 8wmj:n (3.0) BS16 CLA N/A GO:0009765 ... N/A 38734819
    902313 8wmj:n (3.0) BS17 II0 N/A GO:0009765 ... N/A 38734819
    902314 8wmj:n (3.0) BS18 II0 N/A GO:0009765 ... N/A 38734819
    902315 8wmj:n (3.0) BS19 II0 N/A GO:0009765 ... N/A 38734819
    902316 8wmj:n (3.0) BS20 IHT N/A GO:0009765 ... N/A 38734819
    902317 8wmj:n (3.0) BS21 II0 N/A GO:0009765 ... N/A 38734819
    902318 8wmj:s (3.0) BS01 KC2 N/A N/A N/A 38734819
    902319 8wmj:s (3.0) BS02 CLA N/A N/A N/A 38734819
    902320 8wmj:s (3.0) BS03 CLA N/A N/A N/A 38734819
    902321 8wmj:s (3.0) BS04 KC2 N/A N/A N/A 38734819
    902322 8wmj:s (3.0) BS05 WVN N/A N/A N/A 38734819
    902323 8wmj:s (3.0) BS06 CLA N/A N/A N/A 38734819
    902324 8wmj:s (3.0) BS07 CLA N/A N/A N/A 38734819
    902325 8wmj:s (3.0) BS08 CLA N/A N/A N/A 38734819
    902326 8wmj:s (3.0) BS09 CLA N/A N/A N/A 38734819
    902327 8wmj:s (3.0) BS10 CLA N/A N/A N/A 38734819
    902328 8wmj:s (3.0) BS11 CLA N/A N/A N/A 38734819
    902329 8wmk:A (2.17) BS01 WU0 ? GO:0030246 ... P02866 N/A
    902330 8wmk:A (2.17) BS02 MAN ? GO:0030246 ... P02866 N/A
    902331 8wmk:A (2.17) BS03 MN ? GO:0030246 ... P02866 N/A
    902332 8wmk:A (2.17) BS04 CA ? GO:0030246 ... P02866 N/A
    902333 8wmk:B (2.17) BS01 MN ? GO:0030246 ... P02866 N/A
    902334 8wmk:B (2.17) BS02 CA ? GO:0030246 ... P02866 N/A
    902335 8wml:A (2.86) BS01 rna ? GO:0051607 ... A0A401FT36 38735995
    902336 8wml:A (2.86) BS02 ZN ? GO:0051607 ... A0A401FT36 38735995
    902337 8wml:A (2.86) BS03 ZN ? GO:0051607 ... A0A401FT36 38735995
    902338 8wmm:A (2.98) BS01 dna N/A GO:0003676 ... N/A 38811729
    902339 8wmm:A (2.98) BS02 rna N/A GO:0003676 ... N/A 38811729
    902340 8wmm:A (2.98) BS03 dna N/A GO:0003676 ... N/A 38811729
    902341 8wmm:B (2.98) BS01 dna N/A GO:0003676 ... N/A 38811729
    902342 8wmm:B (2.98) BS02 rna N/A GO:0003676 ... N/A 38811729
    902343 8wmm:B (2.98) BS03 dna N/A GO:0003676 ... N/A 38811729
    902344 8wmn:A (2.82) BS01 dna N/A N/A N/A 38811729
    902345 8wmn:A (2.82) BS02 dna N/A N/A N/A 38811729
    902346 8wmn:A (2.82) BS03 rna N/A N/A N/A 38811729
    902347 8wmn:B (2.82) BS01 dna N/A N/A N/A 38811729
    902348 8wmn:B (2.82) BS02 rna N/A N/A N/A 38811729
    902349 8wmn:B (2.82) BS03 dna N/A N/A N/A 38811729
    902350 8wmo:A (2.89) BS01 GTP N/A GO:0000226 ... Q2XVP4 N/A
    902351 8wmo:A (2.89) BS02 WIW N/A GO:0000226 ... Q2XVP4 N/A
    902352 8wmo:B (2.89) BS01 GDP N/A GO:0005525 ... A0A287AGU7 N/A
    902353 8wmo:B (2.89) BS02 WIW N/A GO:0005525 ... A0A287AGU7 N/A
    902354 8wmo:C (2.89) BS01 GTP N/A GO:0000226 ... Q2XVP4 N/A
    902355 8wmo:C (2.89) BS02 CA N/A GO:0000226 ... Q2XVP4 N/A
    902356 8wmo:D (2.89) BS01 GTP N/A GO:0005525 ... A0A287AGU7 N/A
    902357 8wmo:F (2.89) BS01 ACP N/A GO:0000226 ... A0A8C9FGJ1 N/A
    902358 8wmp:A (1.75) BS01 MN N/A GO:0000105 ... P9WML9 N/A
    902359 8wmp:A (1.75) BS02 MN N/A GO:0000105 ... P9WML9 N/A
    902360 8wmq:A (3.3) BS01 ZEA ? GO:0005345 ... Q9SRK7 38172575
    902361 8wmq:B (3.3) BS01 ZEA ? GO:0005345 ... Q9SRK7 38172575
    902362 8wms:A (2.4) BS01 peptide N/A N/A Q96T88 N/A
    902363 8wms:A (2.4) BS02 ZN N/A N/A Q96T88 N/A
    902364 8wms:A (2.4) BS03 ZN N/A N/A Q96T88 N/A
    902365 8wms:A (2.4) BS04 ZN N/A N/A Q96T88 N/A
    902366 8wms:A (2.4) BS05 ZN N/A N/A Q96T88 N/A
    902367 8wmu:A (2.7) BS01 GTP N/A GO:0000226 ... Q2XVP4 N/A
    902368 8wmu:A (2.7) BS02 CA N/A GO:0000226 ... Q2XVP4 N/A
    902369 8wmu:A (2.7) BS03 A1D55 N/A GO:0000226 ... Q2XVP4 N/A
    902370 8wmu:B (2.7) BS01 GDP N/A GO:0005525 ... A0A287AGU7 N/A
    902371 8wmu:B (2.7) BS02 A1D55 N/A GO:0005525 ... A0A287AGU7 N/A
    902372 8wmu:C (2.7) BS01 GTP N/A GO:0000226 ... Q2XVP4 N/A
    902373 8wmu:C (2.7) BS02 CA N/A GO:0000226 ... Q2XVP4 N/A
    902374 8wmu:D (2.7) BS01 GTP N/A GO:0005525 ... A0A287AGU7 N/A
    902375 8wmu:F (2.7) BS01 ACP N/A GO:0000226 ... A0A8C9FGJ1 N/A
    902376 8wmv:A (2.94) BS01 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    902377 8wmv:A (2.94) BS02 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    902378 8wmv:A (2.94) BS03 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    902379 8wmv:A (2.94) BS04 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    902380 8wmv:A (2.94) BS05 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    902381 8wmv:A (2.94) BS06 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    902382 8wmv:A (2.94) BS07 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    902383 8wmv:A (2.94) BS08 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    902384 8wmv:A (2.94) BS09 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    902385 8wmv:A (2.94) BS10 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    902386 8wmv:A (2.94) BS11 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    902387 8wmv:A (2.94) BS12 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    902388 8wmv:A (2.94) BS13 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    902389 8wmv:A (2.94) BS14 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    902390 8wmv:A (2.94) BS15 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    902391 8wmv:A (2.94) BS16 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    902392 8wmv:A (2.94) BS17 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    902393 8wmv:A (2.94) BS18 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    902394 8wmv:A (2.94) BS19 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    902395 8wmv:A (2.94) BS20 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    902396 8wmv:A (2.94) BS21 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    902397 8wmv:A (2.94) BS22 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    902398 8wmv:A (2.94) BS23 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    902399 8wmv:A (2.94) BS24 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    902400 8wmv:A (2.94) BS25 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).