SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    902601 8vto:L (3.09) BS01 BPH ? GO:0009772 ... Q3J1A5 40134359
    902602 8vto:L (3.09) BS02 BCL ? GO:0009772 ... Q3J1A5 40134359
    902603 8vto:L (3.09) BS03 BPH ? GO:0009772 ... Q3J1A5 40134359
    902604 8vto:L (3.09) BS04 BCL ? GO:0009772 ... Q3J1A5 40134359
    902605 8vto:L (3.09) BS05 FE ? GO:0009772 ... Q3J1A5 40134359
    902606 8vto:L (3.09) BS06 BCL ? GO:0009772 ... Q3J1A5 40134359
    902607 8vto:M (3.09) BS01 BPH ? GO:0009772 ... Q3J1A6 40134359
    902608 8vto:M (3.09) BS02 BCL ? GO:0009772 ... Q3J1A6 40134359
    902609 8vto:M (3.09) BS03 BPH ? GO:0009772 ... Q3J1A6 40134359
    902610 8vto:M (3.09) BS04 BCL ? GO:0009772 ... Q3J1A6 40134359
    902611 8vto:M (3.09) BS05 FE ? GO:0009772 ... Q3J1A6 40134359
    902612 8vto:M (3.09) BS06 SPO ? GO:0009772 ... Q3J1A6 40134359
    902613 8vto:M (3.09) BS07 BCL ? GO:0009772 ... Q3J1A6 40134359
    902614 8vtq:A (2.05) BS01 HEM N/A GO:0004833 ... P48775 39106326
    902615 8vtq:A (2.05) BS02 ZIQ N/A GO:0004833 ... P48775 39106326
    902616 8vtq:A (2.05) BS03 A1ADX N/A GO:0004833 ... P48775 39106326
    902617 8vtq:A (2.05) BS04 A1ADX N/A GO:0004833 ... P48775 39106326
    902618 8vtq:B (2.05) BS01 A1ADX N/A GO:0004833 ... P48775 39106326
    902619 8vtq:B (2.05) BS02 HEM N/A GO:0004833 ... P48775 39106326
    902620 8vtq:B (2.05) BS03 ZIQ N/A GO:0004833 ... P48775 39106326
    902621 8vtq:B (2.05) BS04 A1ADX N/A GO:0004833 ... P48775 39106326
    902622 8vtq:C (2.05) BS01 HEM N/A GO:0004833 ... P48775 39106326
    902623 8vtq:C (2.05) BS02 ZIQ N/A GO:0004833 ... P48775 39106326
    902624 8vtq:C (2.05) BS03 A1ADX N/A GO:0004833 ... P48775 39106326
    902625 8vtq:C (2.05) BS04 A1ADX N/A GO:0004833 ... P48775 39106326
    902626 8vtq:D (2.05) BS01 A1ADX N/A GO:0004833 ... P48775 39106326
    902627 8vtq:D (2.05) BS02 HEM N/A GO:0004833 ... P48775 39106326
    902628 8vtq:D (2.05) BS03 ZIQ N/A GO:0004833 ... P48775 39106326
    902629 8vtq:D (2.05) BS04 A1ADX N/A GO:0004833 ... P48775 39106326
    902630 8vts:B (1.91) BS01 RIO ? GO:0003677 ... Q60954 39183959
    902631 8vts:D (1.91) BS01 RIO ? GO:0003677 ... Q60954 39183959
    902632 8vtt:D (2.45) BS01 RIO ? GO:0003677 ... Q60954 39183959
    902633 8vtu:10 (2.4) BS01 rna N/A GO:0003735 ... P60493 39039256
    902634 8vtu:10 (2.4) BS02 rna N/A GO:0003735 ... P60493 39039256
    902635 8vtu:10 (2.4) BS03 rna N/A GO:0003735 ... P60493 39039256
    902636 8vtu:10 (2.4) BS04 MG N/A GO:0003735 ... P60493 39039256
    902637 8vtu:10 (2.4) BS05 MG N/A GO:0003735 ... P60493 39039256
    902638 8vtu:10 (2.4) BS06 MG N/A GO:0003735 ... P60493 39039256
    902639 8vtu:11 (2.4) BS01 rna N/A GO:0003735 ... P60494 39039256
    902640 8vtu:11 (2.4) BS02 rna N/A GO:0003735 ... P60494 39039256
    902641 8vtu:11 (2.4) BS03 MG N/A GO:0003735 ... P60494 39039256
    902642 8vtu:11 (2.4) BS04 MG N/A GO:0003735 ... P60494 39039256
    902643 8vtu:12 (2.4) BS01 rna N/A GO:0003735 ... Q5SHP6 39039256
    902644 8vtu:12 (2.4) BS02 MG N/A GO:0003735 ... Q5SHP6 39039256
    902645 8vtu:13 (2.4) BS01 rna N/A GO:0003735 ... Q5SHQ6 39039256
    902646 8vtu:13 (2.4) BS02 rna N/A GO:0003735 ... Q5SHQ6 39039256
    902647 8vtu:13 (2.4) BS03 MG N/A GO:0003735 ... Q5SHQ6 39039256
    902648 8vtu:13 (2.4) BS04 MG N/A GO:0003735 ... Q5SHQ6 39039256
    902649 8vtu:13 (2.4) BS05 MG N/A GO:0003735 ... Q5SHQ6 39039256
    902650 8vtu:14 (2.4) BS01 rna N/A GO:0003735 ... Q5SJE1 39039256
    902651 8vtu:14 (2.4) BS02 ZN N/A GO:0003735 ... Q5SJE1 39039256
    902652 8vtu:15 (2.4) BS01 rna N/A GO:0003735 ... P80339 39039256
    902653 8vtu:15 (2.4) BS02 MG N/A GO:0003735 ... P80339 39039256
    902654 8vtu:15 (2.4) BS03 ZN N/A GO:0003735 ... P80339 39039256
    902655 8vtu:16 (2.4) BS01 rna N/A GO:0003735 ... P35871 39039256
    902656 8vtu:16 (2.4) BS02 MG N/A GO:0003735 ... P35871 39039256
    902657 8vtu:16 (2.4) BS03 ZN N/A GO:0003735 ... P35871 39039256
    902658 8vtu:17 (2.4) BS01 rna N/A GO:0003735 ... P80340 39039256
    902659 8vtu:17 (2.4) BS02 MG N/A GO:0003735 ... P80340 39039256
    902660 8vtu:17 (2.4) BS03 MG N/A GO:0003735 ... P80340 39039256
    902661 8vtu:18 (2.4) BS01 rna N/A GO:0003735 ... Q5SKU1 39039256
    902662 8vtu:18 (2.4) BS02 MG N/A GO:0003735 ... Q5SKU1 39039256
    902663 8vtu:18 (2.4) BS03 MG N/A GO:0003735 ... Q5SKU1 39039256
    902664 8vtu:18 (2.4) BS04 MG N/A GO:0003735 ... Q5SKU1 39039256
    902665 8vtu:18 (2.4) BS05 MG N/A GO:0003735 ... Q5SKU1 39039256
    902666 8vtu:19 (2.4) BS01 rna N/A GO:0003735 ... Q5SHR2 39039256
    902667 8vtu:19 (2.4) BS02 ZN N/A GO:0003735 ... Q5SHR2 39039256
    902668 8vtu:1D (2.4) BS01 rna N/A GO:0002181 ... P60405 39039256
    902669 8vtu:1D (2.4) BS02 rna N/A GO:0002181 ... P60405 39039256
    902670 8vtu:1D (2.4) BS03 MG N/A GO:0002181 ... P60405 39039256
    902671 8vtu:1D (2.4) BS04 MG N/A GO:0002181 ... P60405 39039256
    902672 8vtu:1D (2.4) BS05 MG N/A GO:0002181 ... P60405 39039256
    902673 8vtu:1D (2.4) BS06 MG N/A GO:0002181 ... P60405 39039256
    902674 8vtu:1D (2.4) BS07 MG N/A GO:0002181 ... P60405 39039256
    902675 8vtu:1D (2.4) BS08 MG N/A GO:0002181 ... P60405 39039256
    902676 8vtu:1D (2.4) BS09 MG N/A GO:0002181 ... P60405 39039256
    902677 8vtu:1D (2.4) BS10 MG N/A GO:0002181 ... P60405 39039256
    902678 8vtu:1D (2.4) BS11 MG N/A GO:0002181 ... P60405 39039256
    902679 8vtu:1D (2.4) BS12 MG N/A GO:0002181 ... P60405 39039256
    902680 8vtu:1D (2.4) BS13 MG N/A GO:0002181 ... P60405 39039256
    902681 8vtu:1D (2.4) BS14 MG N/A GO:0002181 ... P60405 39039256
    902682 8vtu:1E (2.4) BS01 rna N/A GO:0003735 ... Q5SHN8 39039256
    902683 8vtu:1E (2.4) BS02 MG N/A GO:0003735 ... Q5SHN8 39039256
    902684 8vtu:1E (2.4) BS03 MG N/A GO:0003735 ... Q5SHN8 39039256
    902685 8vtu:1E (2.4) BS04 MG N/A GO:0003735 ... Q5SHN8 39039256
    902686 8vtu:1E (2.4) BS05 MG N/A GO:0003735 ... Q5SHN8 39039256
    902687 8vtu:1F (2.4) BS01 rna N/A GO:0003735 ... Q5SHN9 39039256
    902688 8vtu:1F (2.4) BS02 MG N/A GO:0003735 ... Q5SHN9 39039256
    902689 8vtu:1F (2.4) BS03 MG N/A GO:0003735 ... Q5SHN9 39039256
    902690 8vtu:1F (2.4) BS04 MG N/A GO:0003735 ... Q5SHN9 39039256
    902691 8vtu:1F (2.4) BS05 MG N/A GO:0003735 ... Q5SHN9 39039256
    902692 8vtu:1F (2.4) BS06 MG N/A GO:0003735 ... Q5SHN9 39039256
    902693 8vtu:1F (2.4) BS07 MG N/A GO:0003735 ... Q5SHN9 39039256
    902694 8vtu:1F (2.4) BS08 MG N/A GO:0003735 ... Q5SHN9 39039256
    902695 8vtu:1F (2.4) BS09 MG N/A GO:0003735 ... Q5SHN9 39039256
    902696 8vtu:1F (2.4) BS10 MG N/A GO:0003735 ... Q5SHN9 39039256
    902697 8vtu:1G (2.4) BS01 rna N/A GO:0000049 ... Q5SHQ0 39039256
    902698 8vtu:1G (2.4) BS02 rna N/A GO:0000049 ... Q5SHQ0 39039256
    902699 8vtu:1G (2.4) BS03 rna N/A GO:0000049 ... Q5SHQ0 39039256
    902700 8vtu:1G (2.4) BS04 MG N/A GO:0000049 ... Q5SHQ0 39039256
    902701 8vtu:1H (2.4) BS01 rna N/A GO:0002181 ... P0DOY8 39039256
    902702 8vtu:1I (2.4) BS01 rna N/A GO:0003735 ... Q5SLQ1 39039256
    902703 8vtu:1I (2.4) BS02 MG N/A GO:0003735 ... Q5SLQ1 39039256
    902704 8vtu:1N (2.4) BS01 rna N/A GO:0003729 ... P60488 39039256
    902705 8vtu:1N (2.4) BS02 MG N/A GO:0003729 ... P60488 39039256
    902706 8vtu:1N (2.4) BS03 MG N/A GO:0003729 ... P60488 39039256
    902707 8vtu:1N (2.4) BS04 MG N/A GO:0003729 ... P60488 39039256
    902708 8vtu:1O (2.4) BS01 rna N/A GO:0003735 ... Q5SHP8 39039256
    902709 8vtu:1O (2.4) BS02 rna N/A GO:0003735 ... Q5SHP8 39039256
    902710 8vtu:1O (2.4) BS03 MG N/A GO:0003735 ... Q5SHP8 39039256
    902711 8vtu:1O (2.4) BS04 MG N/A GO:0003735 ... Q5SHP8 39039256
    902712 8vtu:1P (2.4) BS01 rna N/A GO:0003735 ... Q5SHQ7 39039256
    902713 8vtu:1P (2.4) BS02 MG N/A GO:0003735 ... Q5SHQ7 39039256
    902714 8vtu:1P (2.4) BS03 MG N/A GO:0003735 ... Q5SHQ7 39039256
    902715 8vtu:1P (2.4) BS04 MG N/A GO:0003735 ... Q5SHQ7 39039256
    902716 8vtu:1P (2.4) BS05 MG N/A GO:0003735 ... Q5SHQ7 39039256
    902717 8vtu:1Q (2.4) BS01 rna N/A GO:0003735 ... P60489 39039256
    902718 8vtu:1Q (2.4) BS02 rna N/A GO:0003735 ... P60489 39039256
    902719 8vtu:1Q (2.4) BS03 rna N/A GO:0003735 ... P60489 39039256
    902720 8vtu:1Q (2.4) BS04 rna N/A GO:0003735 ... P60489 39039256
    902721 8vtu:1Q (2.4) BS05 MG N/A GO:0003735 ... P60489 39039256
    902722 8vtu:1Q (2.4) BS06 MG N/A GO:0003735 ... P60489 39039256
    902723 8vtu:1Q (2.4) BS07 MG N/A GO:0003735 ... P60489 39039256
    902724 8vtu:1Q (2.4) BS08 MG N/A GO:0003735 ... P60489 39039256
    902725 8vtu:1Q (2.4) BS09 MG N/A GO:0003735 ... P60489 39039256
    902726 8vtu:1R (2.4) BS01 rna N/A GO:0003735 ... Q9Z9H5 39039256
    902727 8vtu:1R (2.4) BS02 MG N/A GO:0003735 ... Q9Z9H5 39039256
    902728 8vtu:1R (2.4) BS03 MG N/A GO:0003735 ... Q9Z9H5 39039256
    902729 8vtu:1S (2.4) BS01 rna N/A GO:0003735 ... Q5SHQ4 39039256
    902730 8vtu:1S (2.4) BS02 rna N/A GO:0003735 ... Q5SHQ4 39039256
    902731 8vtu:1S (2.4) BS03 MG N/A GO:0003735 ... Q5SHQ4 39039256
    902732 8vtu:1S (2.4) BS04 MG N/A GO:0003735 ... Q5SHQ4 39039256
    902733 8vtu:1T (2.4) BS01 rna N/A GO:0003735 ... P60490 39039256
    902734 8vtu:1T (2.4) BS02 rna N/A GO:0003735 ... P60490 39039256
    902735 8vtu:1U (2.4) BS01 rna N/A GO:0000027 ... P60491 39039256
    902736 8vtu:1U (2.4) BS02 MG N/A GO:0000027 ... P60491 39039256
    902737 8vtu:1U (2.4) BS03 MG N/A GO:0000027 ... P60491 39039256
    902738 8vtu:1U (2.4) BS04 MG N/A GO:0000027 ... P60491 39039256
    902739 8vtu:1U (2.4) BS05 MG N/A GO:0000027 ... P60491 39039256
    902740 8vtu:1U (2.4) BS06 MG N/A GO:0000027 ... P60491 39039256
    902741 8vtu:1U (2.4) BS07 MG N/A GO:0000027 ... P60491 39039256
    902742 8vtu:1U (2.4) BS08 MG N/A GO:0000027 ... P60491 39039256
    902743 8vtu:1V (2.4) BS01 rna N/A GO:0003723 ... P60492 39039256
    902744 8vtu:1V (2.4) BS02 MG N/A GO:0003723 ... P60492 39039256
    902745 8vtu:1V (2.4) BS03 MG N/A GO:0003723 ... P60492 39039256
    902746 8vtu:1V (2.4) BS04 MG N/A GO:0003723 ... P60492 39039256
    902747 8vtu:1V (2.4) BS05 MG N/A GO:0003723 ... P60492 39039256
    902748 8vtu:1V (2.4) BS06 MG N/A GO:0003723 ... P60492 39039256
    902749 8vtu:1V (2.4) BS07 MG N/A GO:0003723 ... P60492 39039256
    902750 8vtu:1W (2.4) BS01 rna N/A GO:0003735 ... Q5SHP3 39039256
    902751 8vtu:1W (2.4) BS02 MG N/A GO:0003735 ... Q5SHP3 39039256
    902752 8vtu:1W (2.4) BS03 MG N/A GO:0003735 ... Q5SHP3 39039256
    902753 8vtu:1W (2.4) BS04 MG N/A GO:0003735 ... Q5SHP3 39039256
    902754 8vtu:1W (2.4) BS05 MG N/A GO:0003735 ... Q5SHP3 39039256
    902755 8vtu:1X (2.4) BS01 rna N/A GO:0003735 ... Q5SHP0 39039256
    902756 8vtu:1X (2.4) BS02 MG N/A GO:0003735 ... Q5SHP0 39039256
    902757 8vtu:1X (2.4) BS03 MG N/A GO:0003735 ... Q5SHP0 39039256
    902758 8vtu:1X (2.4) BS04 MG N/A GO:0003735 ... Q5SHP0 39039256
    902759 8vtu:1X (2.4) BS05 MG N/A GO:0003735 ... Q5SHP0 39039256
    902760 8vtu:1X (2.4) BS06 MG N/A GO:0003735 ... Q5SHP0 39039256
    902761 8vtu:1Y (2.4) BS01 rna N/A GO:0003723 ... Q5SHP9 39039256
    902762 8vtu:1Y (2.4) BS02 MG N/A GO:0003723 ... Q5SHP9 39039256
    902763 8vtu:1Y (2.4) BS03 MG N/A GO:0003723 ... Q5SHP9 39039256
    902764 8vtu:1Y (2.4) BS04 ZN N/A GO:0003723 ... Q5SHP9 39039256
    902765 8vtu:1Z (2.4) BS01 rna N/A GO:0003723 ... Q5SHZ1 39039256
    902766 8vtu:1Z (2.4) BS02 rna N/A GO:0003723 ... Q5SHZ1 39039256
    902767 8vtu:1b (2.4) BS01 rna N/A GO:0003735 ... P80371 39039256
    902768 8vtu:1c (2.4) BS01 rna N/A GO:0003676 ... P80372 39039256
    902769 8vtu:1d (2.4) BS01 rna N/A GO:0003723 ... P80373 39039256
    902770 8vtu:1d (2.4) BS02 SF4 N/A GO:0003723 ... P80373 39039256
    902771 8vtu:1e (2.4) BS01 rna N/A GO:0003723 ... Q5SHQ5 39039256
    902772 8vtu:1e (2.4) BS02 MG N/A GO:0003723 ... Q5SHQ5 39039256
    902773 8vtu:1e (2.4) BS03 MG N/A GO:0003723 ... Q5SHQ5 39039256
    902774 8vtu:1f (2.4) BS01 rna N/A GO:0003735 ... Q5SLP8 39039256
    902775 8vtu:1f (2.4) BS02 MG N/A GO:0003735 ... Q5SLP8 39039256
    902776 8vtu:1g (2.4) BS01 rna N/A GO:0000049 ... P17291 39039256
    902777 8vtu:1g (2.4) BS02 rna N/A GO:0000049 ... P17291 39039256
    902778 8vtu:1h (2.4) BS01 rna N/A GO:0003735 ... P0DOY9 39039256
    902779 8vtu:1i (2.4) BS01 rna N/A GO:0003723 ... P80374 39039256
    902780 8vtu:1i (2.4) BS02 rna N/A GO:0003723 ... P80374 39039256
    902781 8vtu:1j (2.4) BS01 rna N/A GO:0000049 ... Q5SHN7 39039256
    902782 8vtu:1k (2.4) BS01 rna N/A GO:0003735 ... P80376 39039256
    902783 8vtu:1k (2.4) BS02 MG N/A GO:0003735 ... P80376 39039256
    902784 8vtu:1l (2.4) BS01 rna N/A GO:0000049 ... Q5SHN3 39039256
    902785 8vtu:1l (2.4) BS02 rna N/A GO:0000049 ... Q5SHN3 39039256
    902786 8vtu:1l (2.4) BS03 MG N/A GO:0000049 ... Q5SHN3 39039256
    902787 8vtu:1m (2.4) BS01 rna N/A GO:0000049 ... P80377 39039256
    902788 8vtu:1m (2.4) BS02 rna N/A GO:0000049 ... P80377 39039256
    902789 8vtu:1m (2.4) BS03 rna N/A GO:0000049 ... P80377 39039256
    902790 8vtu:1m (2.4) BS04 MG N/A GO:0000049 ... P80377 39039256
    902791 8vtu:1n (2.4) BS01 rna N/A GO:0003735 ... P0DOY6 39039256
    902792 8vtu:1n (2.4) BS02 ZN N/A GO:0003735 ... P0DOY6 39039256
    902793 8vtu:1o (2.4) BS01 rna N/A GO:0003735 ... Q5SJ76 39039256
    902794 8vtu:1o (2.4) BS02 rna N/A GO:0003735 ... Q5SJ76 39039256
    902795 8vtu:1p (2.4) BS01 rna N/A GO:0003735 ... Q5SJH3 39039256
    902796 8vtu:1q (2.4) BS01 rna N/A GO:0003735 ... P0DOY7 39039256
    902797 8vtu:1r (2.4) BS01 rna N/A GO:0003735 ... Q5SLQ0 39039256
    902798 8vtu:1s (2.4) BS01 rna N/A GO:0000028 ... Q5SHP2 39039256
    902799 8vtu:1t (2.4) BS01 rna N/A GO:0003723 ... P80380 39039256
    902800 8vtu:1t (2.4) BS02 MG N/A GO:0003723 ... P80380 39039256

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).