SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    902801 8vtu:20 (2.4) BS01 rna N/A GO:0003735 ... P60493 39039256
    902802 8vtu:20 (2.4) BS02 rna N/A GO:0003735 ... P60493 39039256
    902803 8vtu:20 (2.4) BS03 rna N/A GO:0003735 ... P60493 39039256
    902804 8vtu:21 (2.4) BS01 rna N/A GO:0003735 ... P60494 39039256
    902805 8vtu:21 (2.4) BS02 rna N/A GO:0003735 ... P60494 39039256
    902806 8vtu:21 (2.4) BS03 MG N/A GO:0003735 ... P60494 39039256
    902807 8vtu:22 (2.4) BS01 rna N/A GO:0003735 ... Q5SHP6 39039256
    902808 8vtu:23 (2.4) BS01 rna N/A GO:0003735 ... Q5SHQ6 39039256
    902809 8vtu:23 (2.4) BS02 rna N/A GO:0003735 ... Q5SHQ6 39039256
    902810 8vtu:23 (2.4) BS03 MG N/A GO:0003735 ... Q5SHQ6 39039256
    902811 8vtu:24 (2.4) BS01 rna N/A GO:0003735 ... Q5SJE1 39039256
    902812 8vtu:24 (2.4) BS02 ZN N/A GO:0003735 ... Q5SJE1 39039256
    902813 8vtu:25 (2.4) BS01 rna N/A GO:0003735 ... P80339 39039256
    902814 8vtu:25 (2.4) BS02 MG N/A GO:0003735 ... P80339 39039256
    902815 8vtu:25 (2.4) BS03 ZN N/A GO:0003735 ... P80339 39039256
    902816 8vtu:26 (2.4) BS01 rna N/A GO:0003735 ... P35871 39039256
    902817 8vtu:26 (2.4) BS02 MG N/A GO:0003735 ... P35871 39039256
    902818 8vtu:26 (2.4) BS03 ZN N/A GO:0003735 ... P35871 39039256
    902819 8vtu:27 (2.4) BS01 rna N/A GO:0003735 ... P80340 39039256
    902820 8vtu:27 (2.4) BS02 MG N/A GO:0003735 ... P80340 39039256
    902821 8vtu:27 (2.4) BS03 MG N/A GO:0003735 ... P80340 39039256
    902822 8vtu:28 (2.4) BS01 rna N/A GO:0003735 ... Q5SKU1 39039256
    902823 8vtu:29 (2.4) BS01 rna N/A GO:0003735 ... Q5SHR2 39039256
    902824 8vtu:29 (2.4) BS02 ZN N/A GO:0003735 ... Q5SHR2 39039256
    902825 8vtu:2D (2.4) BS01 rna N/A GO:0002181 ... P60405 39039256
    902826 8vtu:2D (2.4) BS02 rna N/A GO:0002181 ... P60405 39039256
    902827 8vtu:2D (2.4) BS03 MG N/A GO:0002181 ... P60405 39039256
    902828 8vtu:2D (2.4) BS04 MG N/A GO:0002181 ... P60405 39039256
    902829 8vtu:2D (2.4) BS05 MG N/A GO:0002181 ... P60405 39039256
    902830 8vtu:2D (2.4) BS06 MG N/A GO:0002181 ... P60405 39039256
    902831 8vtu:2E (2.4) BS01 rna N/A GO:0003735 ... Q5SHN8 39039256
    902832 8vtu:2E (2.4) BS02 MG N/A GO:0003735 ... Q5SHN8 39039256
    902833 8vtu:2F (2.4) BS01 rna N/A GO:0003735 ... Q5SHN9 39039256
    902834 8vtu:2F (2.4) BS02 MG N/A GO:0003735 ... Q5SHN9 39039256
    902835 8vtu:2F (2.4) BS03 MG N/A GO:0003735 ... Q5SHN9 39039256
    902836 8vtu:2F (2.4) BS04 MG N/A GO:0003735 ... Q5SHN9 39039256
    902837 8vtu:2G (2.4) BS01 rna N/A GO:0000049 ... Q5SHQ0 39039256
    902838 8vtu:2G (2.4) BS02 rna N/A GO:0000049 ... Q5SHQ0 39039256
    902839 8vtu:2G (2.4) BS03 rna N/A GO:0000049 ... Q5SHQ0 39039256
    902840 8vtu:2G (2.4) BS04 MG N/A GO:0000049 ... Q5SHQ0 39039256
    902841 8vtu:2H (2.4) BS01 rna N/A GO:0002181 ... P0DOY8 39039256
    902842 8vtu:2I (2.4) BS01 rna N/A GO:0003735 ... Q5SLQ1 39039256
    902843 8vtu:2N (2.4) BS01 rna N/A GO:0003729 ... P60488 39039256
    902844 8vtu:2O (2.4) BS01 rna N/A GO:0003735 ... Q5SHP8 39039256
    902845 8vtu:2O (2.4) BS02 rna N/A GO:0003735 ... Q5SHP8 39039256
    902846 8vtu:2P (2.4) BS01 rna N/A GO:0003735 ... Q5SHQ7 39039256
    902847 8vtu:2Q (2.4) BS01 rna N/A GO:0003735 ... P60489 39039256
    902848 8vtu:2Q (2.4) BS02 rna N/A GO:0003735 ... P60489 39039256
    902849 8vtu:2Q (2.4) BS03 rna N/A GO:0003735 ... P60489 39039256
    902850 8vtu:2Q (2.4) BS04 rna N/A GO:0003735 ... P60489 39039256
    902851 8vtu:2Q (2.4) BS05 MG N/A GO:0003735 ... P60489 39039256
    902852 8vtu:2Q (2.4) BS06 MG N/A GO:0003735 ... P60489 39039256
    902853 8vtu:2R (2.4) BS01 rna N/A GO:0003735 ... Q9Z9H5 39039256
    902854 8vtu:2S (2.4) BS01 rna N/A GO:0003735 ... Q5SHQ4 39039256
    902855 8vtu:2S (2.4) BS02 rna N/A GO:0003735 ... Q5SHQ4 39039256
    902856 8vtu:2T (2.4) BS01 rna N/A GO:0003735 ... P60490 39039256
    902857 8vtu:2T (2.4) BS02 rna N/A GO:0003735 ... P60490 39039256
    902858 8vtu:2T (2.4) BS03 MG N/A GO:0003735 ... P60490 39039256
    902859 8vtu:2U (2.4) BS01 rna N/A GO:0000027 ... P60491 39039256
    902860 8vtu:2U (2.4) BS02 MG N/A GO:0000027 ... P60491 39039256
    902861 8vtu:2V (2.4) BS01 rna N/A GO:0003723 ... P60492 39039256
    902862 8vtu:2V (2.4) BS02 MG N/A GO:0003723 ... P60492 39039256
    902863 8vtu:2W (2.4) BS01 rna N/A GO:0003735 ... Q5SHP3 39039256
    902864 8vtu:2W (2.4) BS02 MG N/A GO:0003735 ... Q5SHP3 39039256
    902865 8vtu:2X (2.4) BS01 rna N/A GO:0003735 ... Q5SHP0 39039256
    902866 8vtu:2X (2.4) BS02 MG N/A GO:0003735 ... Q5SHP0 39039256
    902867 8vtu:2Y (2.4) BS01 rna N/A GO:0003723 ... Q5SHP9 39039256
    902868 8vtu:2Y (2.4) BS02 ZN N/A GO:0003723 ... Q5SHP9 39039256
    902869 8vtu:2Z (2.4) BS01 rna N/A GO:0003723 ... Q5SHZ1 39039256
    902870 8vtu:2Z (2.4) BS02 rna N/A GO:0003723 ... Q5SHZ1 39039256
    902871 8vtu:2b (2.4) BS01 rna N/A GO:0003735 ... P80371 39039256
    902872 8vtu:2c (2.4) BS01 rna N/A GO:0003676 ... P80372 39039256
    902873 8vtu:2d (2.4) BS01 rna N/A GO:0003723 ... P80373 39039256
    902874 8vtu:2d (2.4) BS02 SF4 N/A GO:0003723 ... P80373 39039256
    902875 8vtu:2e (2.4) BS01 rna N/A GO:0003723 ... Q5SHQ5 39039256
    902876 8vtu:2e (2.4) BS02 MG N/A GO:0003723 ... Q5SHQ5 39039256
    902877 8vtu:2f (2.4) BS01 rna N/A GO:0003735 ... Q5SLP8 39039256
    902878 8vtu:2f (2.4) BS02 MG N/A GO:0003735 ... Q5SLP8 39039256
    902879 8vtu:2g (2.4) BS01 rna N/A GO:0000049 ... P17291 39039256
    902880 8vtu:2g (2.4) BS02 rna N/A GO:0000049 ... P17291 39039256
    902881 8vtu:2h (2.4) BS01 rna N/A GO:0003735 ... P0DOY9 39039256
    902882 8vtu:2i (2.4) BS01 rna N/A GO:0003723 ... P80374 39039256
    902883 8vtu:2i (2.4) BS02 rna N/A GO:0003723 ... P80374 39039256
    902884 8vtu:2j (2.4) BS01 rna N/A GO:0000049 ... Q5SHN7 39039256
    902885 8vtu:2k (2.4) BS01 rna N/A GO:0003735 ... P80376 39039256
    902886 8vtu:2k (2.4) BS02 MG N/A GO:0003735 ... P80376 39039256
    902887 8vtu:2l (2.4) BS01 rna N/A GO:0000049 ... Q5SHN3 39039256
    902888 8vtu:2l (2.4) BS02 MG N/A GO:0000049 ... Q5SHN3 39039256
    902889 8vtu:2l (2.4) BS03 MG N/A GO:0000049 ... Q5SHN3 39039256
    902890 8vtu:2l (2.4) BS04 MG N/A GO:0000049 ... Q5SHN3 39039256
    902891 8vtu:2m (2.4) BS01 rna N/A GO:0000049 ... P80377 39039256
    902892 8vtu:2m (2.4) BS02 rna N/A GO:0000049 ... P80377 39039256
    902893 8vtu:2n (2.4) BS01 rna N/A GO:0003735 ... P0DOY6 39039256
    902894 8vtu:2n (2.4) BS02 ZN N/A GO:0003735 ... P0DOY6 39039256
    902895 8vtu:2o (2.4) BS01 rna N/A GO:0003735 ... Q5SJ76 39039256
    902896 8vtu:2o (2.4) BS02 rna N/A GO:0003735 ... Q5SJ76 39039256
    902897 8vtu:2p (2.4) BS01 rna N/A GO:0003735 ... Q5SJH3 39039256
    902898 8vtu:2q (2.4) BS01 rna N/A GO:0003735 ... P0DOY7 39039256
    902899 8vtu:2q (2.4) BS02 MG N/A GO:0003735 ... P0DOY7 39039256
    902900 8vtu:2q (2.4) BS03 MG N/A GO:0003735 ... P0DOY7 39039256
    902901 8vtu:2r (2.4) BS01 rna N/A GO:0003735 ... Q5SLQ0 39039256
    902902 8vtu:2s (2.4) BS01 rna N/A GO:0000028 ... Q5SHP2 39039256
    902903 8vtu:2t (2.4) BS01 rna N/A GO:0003723 ... P80380 39039256
    902904 8vtv:10 (2.55) BS01 rna N/A GO:0003735 ... P60493 39039256
    902905 8vtv:10 (2.55) BS02 rna N/A GO:0003735 ... P60493 39039256
    902906 8vtv:10 (2.55) BS03 rna N/A GO:0003735 ... P60493 39039256
    902907 8vtv:10 (2.55) BS04 MG N/A GO:0003735 ... P60493 39039256
    902908 8vtv:10 (2.55) BS05 MG N/A GO:0003735 ... P60493 39039256
    902909 8vtv:11 (2.55) BS01 rna N/A GO:0003735 ... P60494 39039256
    902910 8vtv:11 (2.55) BS02 rna N/A GO:0003735 ... P60494 39039256
    902911 8vtv:11 (2.55) BS03 MG N/A GO:0003735 ... P60494 39039256
    902912 8vtv:12 (2.55) BS01 rna N/A GO:0003735 ... Q5SHP6 39039256
    902913 8vtv:12 (2.55) BS02 MG N/A GO:0003735 ... Q5SHP6 39039256
    902914 8vtv:13 (2.55) BS01 rna N/A GO:0003735 ... Q5SHQ6 39039256
    902915 8vtv:13 (2.55) BS02 rna N/A GO:0003735 ... Q5SHQ6 39039256
    902916 8vtv:13 (2.55) BS03 MG N/A GO:0003735 ... Q5SHQ6 39039256
    902917 8vtv:13 (2.55) BS04 MG N/A GO:0003735 ... Q5SHQ6 39039256
    902918 8vtv:13 (2.55) BS05 MG N/A GO:0003735 ... Q5SHQ6 39039256
    902919 8vtv:13 (2.55) BS06 MG N/A GO:0003735 ... Q5SHQ6 39039256
    902920 8vtv:14 (2.55) BS01 rna N/A GO:0003735 ... Q5SJE1 39039256
    902921 8vtv:14 (2.55) BS02 ZN N/A GO:0003735 ... Q5SJE1 39039256
    902922 8vtv:15 (2.55) BS01 rna N/A GO:0003735 ... P80339 39039256
    902923 8vtv:15 (2.55) BS02 MG N/A GO:0003735 ... P80339 39039256
    902924 8vtv:15 (2.55) BS03 MG N/A GO:0003735 ... P80339 39039256
    902925 8vtv:15 (2.55) BS04 MG N/A GO:0003735 ... P80339 39039256
    902926 8vtv:15 (2.55) BS05 ZN N/A GO:0003735 ... P80339 39039256
    902927 8vtv:16 (2.55) BS01 rna N/A GO:0003735 ... P35871 39039256
    902928 8vtv:16 (2.55) BS02 MG N/A GO:0003735 ... P35871 39039256
    902929 8vtv:16 (2.55) BS03 MG N/A GO:0003735 ... P35871 39039256
    902930 8vtv:16 (2.55) BS04 ZN N/A GO:0003735 ... P35871 39039256
    902931 8vtv:17 (2.55) BS01 rna N/A GO:0003735 ... P80340 39039256
    902932 8vtv:17 (2.55) BS02 MG N/A GO:0003735 ... P80340 39039256
    902933 8vtv:17 (2.55) BS03 MG N/A GO:0003735 ... P80340 39039256
    902934 8vtv:18 (2.55) BS01 rna N/A GO:0003735 ... Q5SKU1 39039256
    902935 8vtv:18 (2.55) BS02 MG N/A GO:0003735 ... Q5SKU1 39039256
    902936 8vtv:18 (2.55) BS03 MG N/A GO:0003735 ... Q5SKU1 39039256
    902937 8vtv:19 (2.55) BS01 rna N/A GO:0003735 ... Q5SHR2 39039256
    902938 8vtv:19 (2.55) BS02 ZN N/A GO:0003735 ... Q5SHR2 39039256
    902939 8vtv:1D (2.55) BS01 rna N/A GO:0002181 ... P60405 39039256
    902940 8vtv:1D (2.55) BS02 rna N/A GO:0002181 ... P60405 39039256
    902941 8vtv:1D (2.55) BS03 MG N/A GO:0002181 ... P60405 39039256
    902942 8vtv:1D (2.55) BS04 MG N/A GO:0002181 ... P60405 39039256
    902943 8vtv:1D (2.55) BS05 MG N/A GO:0002181 ... P60405 39039256
    902944 8vtv:1D (2.55) BS06 MG N/A GO:0002181 ... P60405 39039256
    902945 8vtv:1D (2.55) BS07 MG N/A GO:0002181 ... P60405 39039256
    902946 8vtv:1D (2.55) BS08 MG N/A GO:0002181 ... P60405 39039256
    902947 8vtv:1D (2.55) BS09 MG N/A GO:0002181 ... P60405 39039256
    902948 8vtv:1D (2.55) BS10 MG N/A GO:0002181 ... P60405 39039256
    902949 8vtv:1D (2.55) BS11 MG N/A GO:0002181 ... P60405 39039256
    902950 8vtv:1D (2.55) BS12 MG N/A GO:0002181 ... P60405 39039256
    902951 8vtv:1D (2.55) BS13 MG N/A GO:0002181 ... P60405 39039256
    902952 8vtv:1E (2.55) BS01 rna N/A GO:0003735 ... Q5SHN8 39039256
    902953 8vtv:1E (2.55) BS02 MG N/A GO:0003735 ... Q5SHN8 39039256
    902954 8vtv:1E (2.55) BS03 MG N/A GO:0003735 ... Q5SHN8 39039256
    902955 8vtv:1E (2.55) BS04 MG N/A GO:0003735 ... Q5SHN8 39039256
    902956 8vtv:1E (2.55) BS05 MG N/A GO:0003735 ... Q5SHN8 39039256
    902957 8vtv:1F (2.55) BS01 rna N/A GO:0003735 ... Q5SHN9 39039256
    902958 8vtv:1F (2.55) BS02 MG N/A GO:0003735 ... Q5SHN9 39039256
    902959 8vtv:1F (2.55) BS03 MG N/A GO:0003735 ... Q5SHN9 39039256
    902960 8vtv:1F (2.55) BS04 MG N/A GO:0003735 ... Q5SHN9 39039256
    902961 8vtv:1F (2.55) BS05 MG N/A GO:0003735 ... Q5SHN9 39039256
    902962 8vtv:1F (2.55) BS06 MG N/A GO:0003735 ... Q5SHN9 39039256
    902963 8vtv:1F (2.55) BS07 MG N/A GO:0003735 ... Q5SHN9 39039256
    902964 8vtv:1F (2.55) BS08 MG N/A GO:0003735 ... Q5SHN9 39039256
    902965 8vtv:1F (2.55) BS09 MG N/A GO:0003735 ... Q5SHN9 39039256
    902966 8vtv:1F (2.55) BS10 MG N/A GO:0003735 ... Q5SHN9 39039256
    902967 8vtv:1G (2.55) BS01 rna N/A GO:0000049 ... Q5SHQ0 39039256
    902968 8vtv:1G (2.55) BS02 rna N/A GO:0000049 ... Q5SHQ0 39039256
    902969 8vtv:1G (2.55) BS03 rna N/A GO:0000049 ... Q5SHQ0 39039256
    902970 8vtv:1G (2.55) BS04 MG N/A GO:0000049 ... Q5SHQ0 39039256
    902971 8vtv:1G (2.55) BS05 MG N/A GO:0000049 ... Q5SHQ0 39039256
    902972 8vtv:1H (2.55) BS01 rna N/A GO:0002181 ... P0DOY8 39039256
    902973 8vtv:1I (2.55) BS01 rna N/A GO:0003735 ... Q5SLQ1 39039256
    902974 8vtv:1I (2.55) BS02 MG N/A GO:0003735 ... Q5SLQ1 39039256
    902975 8vtv:1N (2.55) BS01 rna N/A GO:0003729 ... P60488 39039256
    902976 8vtv:1N (2.55) BS02 MG N/A GO:0003729 ... P60488 39039256
    902977 8vtv:1N (2.55) BS03 MG N/A GO:0003729 ... P60488 39039256
    902978 8vtv:1N (2.55) BS04 MG N/A GO:0003729 ... P60488 39039256
    902979 8vtv:1N (2.55) BS05 MG N/A GO:0003729 ... P60488 39039256
    902980 8vtv:1N (2.55) BS06 MG N/A GO:0003729 ... P60488 39039256
    902981 8vtv:1O (2.55) BS01 rna N/A GO:0003735 ... Q5SHP8 39039256
    902982 8vtv:1O (2.55) BS02 rna N/A GO:0003735 ... Q5SHP8 39039256
    902983 8vtv:1O (2.55) BS03 MG N/A GO:0003735 ... Q5SHP8 39039256
    902984 8vtv:1P (2.55) BS01 rna N/A GO:0003735 ... Q5SHQ7 39039256
    902985 8vtv:1P (2.55) BS02 MG N/A GO:0003735 ... Q5SHQ7 39039256
    902986 8vtv:1P (2.55) BS03 MG N/A GO:0003735 ... Q5SHQ7 39039256
    902987 8vtv:1P (2.55) BS04 MG N/A GO:0003735 ... Q5SHQ7 39039256
    902988 8vtv:1P (2.55) BS05 MG N/A GO:0003735 ... Q5SHQ7 39039256
    902989 8vtv:1Q (2.55) BS01 rna N/A GO:0003735 ... P60489 39039256
    902990 8vtv:1Q (2.55) BS02 rna N/A GO:0003735 ... P60489 39039256
    902991 8vtv:1Q (2.55) BS03 rna N/A GO:0003735 ... P60489 39039256
    902992 8vtv:1Q (2.55) BS04 rna N/A GO:0003735 ... P60489 39039256
    902993 8vtv:1Q (2.55) BS05 MG N/A GO:0003735 ... P60489 39039256
    902994 8vtv:1Q (2.55) BS06 MG N/A GO:0003735 ... P60489 39039256
    902995 8vtv:1Q (2.55) BS07 MG N/A GO:0003735 ... P60489 39039256
    902996 8vtv:1Q (2.55) BS08 MG N/A GO:0003735 ... P60489 39039256
    902997 8vtv:1Q (2.55) BS09 MG N/A GO:0003735 ... P60489 39039256
    902998 8vtv:1R (2.55) BS01 rna N/A GO:0003735 ... Q9Z9H5 39039256
    902999 8vtv:1R (2.55) BS02 MG N/A GO:0003735 ... Q9Z9H5 39039256
    903000 8vtv:1S (2.55) BS01 rna N/A GO:0003735 ... Q5SHQ4 39039256

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).