SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    903001 8vtv:1S (2.55) BS02 rna N/A GO:0003735 ... Q5SHQ4 39039256
    903002 8vtv:1S (2.55) BS03 MG N/A GO:0003735 ... Q5SHQ4 39039256
    903003 8vtv:1S (2.55) BS04 MG N/A GO:0003735 ... Q5SHQ4 39039256
    903004 8vtv:1T (2.55) BS01 rna N/A GO:0003735 ... P60490 39039256
    903005 8vtv:1T (2.55) BS02 rna N/A GO:0003735 ... P60490 39039256
    903006 8vtv:1U (2.55) BS01 rna N/A GO:0000027 ... P60491 39039256
    903007 8vtv:1U (2.55) BS02 MG N/A GO:0000027 ... P60491 39039256
    903008 8vtv:1U (2.55) BS03 MG N/A GO:0000027 ... P60491 39039256
    903009 8vtv:1U (2.55) BS04 MG N/A GO:0000027 ... P60491 39039256
    903010 8vtv:1U (2.55) BS05 MG N/A GO:0000027 ... P60491 39039256
    903011 8vtv:1U (2.55) BS06 MG N/A GO:0000027 ... P60491 39039256
    903012 8vtv:1U (2.55) BS07 MG N/A GO:0000027 ... P60491 39039256
    903013 8vtv:1V (2.55) BS01 rna N/A GO:0003723 ... P60492 39039256
    903014 8vtv:1V (2.55) BS02 MG N/A GO:0003723 ... P60492 39039256
    903015 8vtv:1V (2.55) BS03 MG N/A GO:0003723 ... P60492 39039256
    903016 8vtv:1V (2.55) BS04 MG N/A GO:0003723 ... P60492 39039256
    903017 8vtv:1V (2.55) BS05 MG N/A GO:0003723 ... P60492 39039256
    903018 8vtv:1V (2.55) BS06 MG N/A GO:0003723 ... P60492 39039256
    903019 8vtv:1W (2.55) BS01 rna N/A GO:0003735 ... Q5SHP3 39039256
    903020 8vtv:1W (2.55) BS02 MG N/A GO:0003735 ... Q5SHP3 39039256
    903021 8vtv:1W (2.55) BS03 MG N/A GO:0003735 ... Q5SHP3 39039256
    903022 8vtv:1W (2.55) BS04 MG N/A GO:0003735 ... Q5SHP3 39039256
    903023 8vtv:1W (2.55) BS05 MG N/A GO:0003735 ... Q5SHP3 39039256
    903024 8vtv:1W (2.55) BS06 MG N/A GO:0003735 ... Q5SHP3 39039256
    903025 8vtv:1W (2.55) BS07 MG N/A GO:0003735 ... Q5SHP3 39039256
    903026 8vtv:1X (2.55) BS01 rna N/A GO:0003735 ... Q5SHP0 39039256
    903027 8vtv:1X (2.55) BS02 MG N/A GO:0003735 ... Q5SHP0 39039256
    903028 8vtv:1X (2.55) BS03 MG N/A GO:0003735 ... Q5SHP0 39039256
    903029 8vtv:1X (2.55) BS04 MG N/A GO:0003735 ... Q5SHP0 39039256
    903030 8vtv:1X (2.55) BS05 MG N/A GO:0003735 ... Q5SHP0 39039256
    903031 8vtv:1X (2.55) BS06 MG N/A GO:0003735 ... Q5SHP0 39039256
    903032 8vtv:1Y (2.55) BS01 rna N/A GO:0003723 ... Q5SHP9 39039256
    903033 8vtv:1Y (2.55) BS02 MG N/A GO:0003723 ... Q5SHP9 39039256
    903034 8vtv:1Y (2.55) BS03 ZN N/A GO:0003723 ... Q5SHP9 39039256
    903035 8vtv:1Z (2.55) BS01 rna N/A GO:0003723 ... Q5SHZ1 39039256
    903036 8vtv:1Z (2.55) BS02 rna N/A GO:0003723 ... Q5SHZ1 39039256
    903037 8vtv:1b (2.55) BS01 rna N/A GO:0003735 ... P80371 39039256
    903038 8vtv:1c (2.55) BS01 rna N/A GO:0003676 ... P80372 39039256
    903039 8vtv:1d (2.55) BS01 rna N/A GO:0003723 ... P80373 39039256
    903040 8vtv:1d (2.55) BS02 SF4 N/A GO:0003723 ... P80373 39039256
    903041 8vtv:1e (2.55) BS01 rna N/A GO:0003723 ... Q5SHQ5 39039256
    903042 8vtv:1e (2.55) BS02 MG N/A GO:0003723 ... Q5SHQ5 39039256
    903043 8vtv:1e (2.55) BS03 MG N/A GO:0003723 ... Q5SHQ5 39039256
    903044 8vtv:1f (2.55) BS01 rna N/A GO:0003735 ... Q5SLP8 39039256
    903045 8vtv:1g (2.55) BS01 rna N/A GO:0000049 ... P17291 39039256
    903046 8vtv:1g (2.55) BS02 rna N/A GO:0000049 ... P17291 39039256
    903047 8vtv:1h (2.55) BS01 rna N/A GO:0003735 ... P0DOY9 39039256
    903048 8vtv:1i (2.55) BS01 rna N/A GO:0003723 ... P80374 39039256
    903049 8vtv:1i (2.55) BS02 rna N/A GO:0003723 ... P80374 39039256
    903050 8vtv:1j (2.55) BS01 rna N/A GO:0000049 ... Q5SHN7 39039256
    903051 8vtv:1k (2.55) BS01 rna N/A GO:0003735 ... P80376 39039256
    903052 8vtv:1k (2.55) BS02 MG N/A GO:0003735 ... P80376 39039256
    903053 8vtv:1l (2.55) BS01 rna N/A GO:0000049 ... Q5SHN3 39039256
    903054 8vtv:1l (2.55) BS02 rna N/A GO:0000049 ... Q5SHN3 39039256
    903055 8vtv:1l (2.55) BS03 MG N/A GO:0000049 ... Q5SHN3 39039256
    903056 8vtv:1m (2.55) BS01 rna N/A GO:0000049 ... P80377 39039256
    903057 8vtv:1m (2.55) BS02 rna N/A GO:0000049 ... P80377 39039256
    903058 8vtv:1m (2.55) BS03 MG N/A GO:0000049 ... P80377 39039256
    903059 8vtv:1n (2.55) BS01 rna N/A GO:0003735 ... P0DOY6 39039256
    903060 8vtv:1n (2.55) BS02 ZN N/A GO:0003735 ... P0DOY6 39039256
    903061 8vtv:1o (2.55) BS01 rna N/A GO:0003735 ... Q5SJ76 39039256
    903062 8vtv:1o (2.55) BS02 rna N/A GO:0003735 ... Q5SJ76 39039256
    903063 8vtv:1p (2.55) BS01 rna N/A GO:0003735 ... Q5SJH3 39039256
    903064 8vtv:1q (2.55) BS01 rna N/A GO:0003735 ... P0DOY7 39039256
    903065 8vtv:1r (2.55) BS01 rna N/A GO:0003735 ... Q5SLQ0 39039256
    903066 8vtv:1s (2.55) BS01 rna N/A GO:0000028 ... Q5SHP2 39039256
    903067 8vtv:1t (2.55) BS01 rna N/A GO:0003723 ... P80380 39039256
    903068 8vtv:1t (2.55) BS02 MG N/A GO:0003723 ... P80380 39039256
    903069 8vtv:20 (2.55) BS01 rna N/A GO:0003735 ... P60493 39039256
    903070 8vtv:20 (2.55) BS02 rna N/A GO:0003735 ... P60493 39039256
    903071 8vtv:21 (2.55) BS01 rna N/A GO:0003735 ... P60494 39039256
    903072 8vtv:21 (2.55) BS02 rna N/A GO:0003735 ... P60494 39039256
    903073 8vtv:21 (2.55) BS03 MG N/A GO:0003735 ... P60494 39039256
    903074 8vtv:22 (2.55) BS01 rna N/A GO:0003735 ... Q5SHP6 39039256
    903075 8vtv:23 (2.55) BS01 rna N/A GO:0003735 ... Q5SHQ6 39039256
    903076 8vtv:23 (2.55) BS02 MG N/A GO:0003735 ... Q5SHQ6 39039256
    903077 8vtv:24 (2.55) BS01 rna N/A GO:0003735 ... Q5SJE1 39039256
    903078 8vtv:24 (2.55) BS02 ZN N/A GO:0003735 ... Q5SJE1 39039256
    903079 8vtv:25 (2.55) BS01 rna N/A GO:0003735 ... P80339 39039256
    903080 8vtv:25 (2.55) BS02 MG N/A GO:0003735 ... P80339 39039256
    903081 8vtv:25 (2.55) BS03 ZN N/A GO:0003735 ... P80339 39039256
    903082 8vtv:26 (2.55) BS01 rna N/A GO:0003735 ... P35871 39039256
    903083 8vtv:26 (2.55) BS02 MG N/A GO:0003735 ... P35871 39039256
    903084 8vtv:26 (2.55) BS03 ZN N/A GO:0003735 ... P35871 39039256
    903085 8vtv:27 (2.55) BS01 rna N/A GO:0003735 ... P80340 39039256
    903086 8vtv:27 (2.55) BS02 MG N/A GO:0003735 ... P80340 39039256
    903087 8vtv:28 (2.55) BS01 rna N/A GO:0003735 ... Q5SKU1 39039256
    903088 8vtv:28 (2.55) BS02 MG N/A GO:0003735 ... Q5SKU1 39039256
    903089 8vtv:29 (2.55) BS01 rna N/A GO:0003735 ... Q5SHR2 39039256
    903090 8vtv:29 (2.55) BS02 MG N/A GO:0003735 ... Q5SHR2 39039256
    903091 8vtv:29 (2.55) BS03 ZN N/A GO:0003735 ... Q5SHR2 39039256
    903092 8vtv:2D (2.55) BS01 rna N/A GO:0002181 ... P60405 39039256
    903093 8vtv:2D (2.55) BS02 rna N/A GO:0002181 ... P60405 39039256
    903094 8vtv:2D (2.55) BS03 MG N/A GO:0002181 ... P60405 39039256
    903095 8vtv:2D (2.55) BS04 MG N/A GO:0002181 ... P60405 39039256
    903096 8vtv:2D (2.55) BS05 MG N/A GO:0002181 ... P60405 39039256
    903097 8vtv:2E (2.55) BS01 rna N/A GO:0003735 ... Q5SHN8 39039256
    903098 8vtv:2E (2.55) BS02 MG N/A GO:0003735 ... Q5SHN8 39039256
    903099 8vtv:2F (2.55) BS01 rna N/A GO:0003735 ... Q5SHN9 39039256
    903100 8vtv:2F (2.55) BS02 MG N/A GO:0003735 ... Q5SHN9 39039256
    903101 8vtv:2F (2.55) BS03 MG N/A GO:0003735 ... Q5SHN9 39039256
    903102 8vtv:2F (2.55) BS04 MG N/A GO:0003735 ... Q5SHN9 39039256
    903103 8vtv:2F (2.55) BS05 MG N/A GO:0003735 ... Q5SHN9 39039256
    903104 8vtv:2G (2.55) BS01 rna N/A GO:0000049 ... Q5SHQ0 39039256
    903105 8vtv:2G (2.55) BS02 rna N/A GO:0000049 ... Q5SHQ0 39039256
    903106 8vtv:2G (2.55) BS03 rna N/A GO:0000049 ... Q5SHQ0 39039256
    903107 8vtv:2G (2.55) BS04 MG N/A GO:0000049 ... Q5SHQ0 39039256
    903108 8vtv:2H (2.55) BS01 rna N/A GO:0002181 ... P0DOY8 39039256
    903109 8vtv:2I (2.55) BS01 rna N/A GO:0003735 ... Q5SLQ1 39039256
    903110 8vtv:2N (2.55) BS01 rna N/A GO:0003729 ... P60488 39039256
    903111 8vtv:2O (2.55) BS01 rna N/A GO:0003735 ... Q5SHP8 39039256
    903112 8vtv:2O (2.55) BS02 rna N/A GO:0003735 ... Q5SHP8 39039256
    903113 8vtv:2P (2.55) BS01 rna N/A GO:0003735 ... Q5SHQ7 39039256
    903114 8vtv:2Q (2.55) BS01 rna N/A GO:0003735 ... P60489 39039256
    903115 8vtv:2Q (2.55) BS02 rna N/A GO:0003735 ... P60489 39039256
    903116 8vtv:2Q (2.55) BS03 rna N/A GO:0003735 ... P60489 39039256
    903117 8vtv:2Q (2.55) BS04 rna N/A GO:0003735 ... P60489 39039256
    903118 8vtv:2Q (2.55) BS05 MG N/A GO:0003735 ... P60489 39039256
    903119 8vtv:2R (2.55) BS01 rna N/A GO:0003735 ... Q9Z9H5 39039256
    903120 8vtv:2S (2.55) BS01 rna N/A GO:0003735 ... Q5SHQ4 39039256
    903121 8vtv:2S (2.55) BS02 rna N/A GO:0003735 ... Q5SHQ4 39039256
    903122 8vtv:2T (2.55) BS01 rna N/A GO:0003735 ... P60490 39039256
    903123 8vtv:2T (2.55) BS02 rna N/A GO:0003735 ... P60490 39039256
    903124 8vtv:2T (2.55) BS03 MG N/A GO:0003735 ... P60490 39039256
    903125 8vtv:2U (2.55) BS01 rna N/A GO:0000027 ... P60491 39039256
    903126 8vtv:2U (2.55) BS02 MG N/A GO:0000027 ... P60491 39039256
    903127 8vtv:2V (2.55) BS01 rna N/A GO:0003723 ... P60492 39039256
    903128 8vtv:2V (2.55) BS02 MG N/A GO:0003723 ... P60492 39039256
    903129 8vtv:2W (2.55) BS01 rna N/A GO:0003735 ... Q5SHP3 39039256
    903130 8vtv:2W (2.55) BS02 MG N/A GO:0003735 ... Q5SHP3 39039256
    903131 8vtv:2W (2.55) BS03 MG N/A GO:0003735 ... Q5SHP3 39039256
    903132 8vtv:2X (2.55) BS01 rna N/A GO:0003735 ... Q5SHP0 39039256
    903133 8vtv:2X (2.55) BS02 MG N/A GO:0003735 ... Q5SHP0 39039256
    903134 8vtv:2Y (2.55) BS01 rna N/A GO:0003723 ... Q5SHP9 39039256
    903135 8vtv:2Y (2.55) BS02 ZN N/A GO:0003723 ... Q5SHP9 39039256
    903136 8vtv:2Z (2.55) BS01 rna N/A GO:0003723 ... Q5SHZ1 39039256
    903137 8vtv:2Z (2.55) BS02 rna N/A GO:0003723 ... Q5SHZ1 39039256
    903138 8vtv:2Z (2.55) BS03 MG N/A GO:0003723 ... Q5SHZ1 39039256
    903139 8vtv:2b (2.55) BS01 rna N/A GO:0003735 ... P80371 39039256
    903140 8vtv:2c (2.55) BS01 rna N/A GO:0003676 ... P80372 39039256
    903141 8vtv:2d (2.55) BS01 rna N/A GO:0003723 ... P80373 39039256
    903142 8vtv:2d (2.55) BS02 MG N/A GO:0003723 ... P80373 39039256
    903143 8vtv:2d (2.55) BS03 SF4 N/A GO:0003723 ... P80373 39039256
    903144 8vtv:2e (2.55) BS01 rna N/A GO:0003723 ... Q5SHQ5 39039256
    903145 8vtv:2e (2.55) BS02 MG N/A GO:0003723 ... Q5SHQ5 39039256
    903146 8vtv:2f (2.55) BS01 rna N/A GO:0003735 ... Q5SLP8 39039256
    903147 8vtv:2f (2.55) BS02 MG N/A GO:0003735 ... Q5SLP8 39039256
    903148 8vtv:2g (2.55) BS01 rna N/A GO:0000049 ... P17291 39039256
    903149 8vtv:2g (2.55) BS02 rna N/A GO:0000049 ... P17291 39039256
    903150 8vtv:2h (2.55) BS01 rna N/A GO:0003735 ... P0DOY9 39039256
    903151 8vtv:2i (2.55) BS01 rna N/A GO:0003723 ... P80374 39039256
    903152 8vtv:2i (2.55) BS02 rna N/A GO:0003723 ... P80374 39039256
    903153 8vtv:2j (2.55) BS01 rna N/A GO:0000049 ... Q5SHN7 39039256
    903154 8vtv:2k (2.55) BS01 rna N/A GO:0003735 ... P80376 39039256
    903155 8vtv:2k (2.55) BS02 MG N/A GO:0003735 ... P80376 39039256
    903156 8vtv:2l (2.55) BS01 rna N/A GO:0000049 ... Q5SHN3 39039256
    903157 8vtv:2l (2.55) BS02 MG N/A GO:0000049 ... Q5SHN3 39039256
    903158 8vtv:2l (2.55) BS03 MG N/A GO:0000049 ... Q5SHN3 39039256
    903159 8vtv:2m (2.55) BS01 rna N/A GO:0000049 ... P80377 39039256
    903160 8vtv:2m (2.55) BS02 rna N/A GO:0000049 ... P80377 39039256
    903161 8vtv:2n (2.55) BS01 rna N/A GO:0003735 ... P0DOY6 39039256
    903162 8vtv:2n (2.55) BS02 ZN N/A GO:0003735 ... P0DOY6 39039256
    903163 8vtv:2o (2.55) BS01 rna N/A GO:0003735 ... Q5SJ76 39039256
    903164 8vtv:2o (2.55) BS02 rna N/A GO:0003735 ... Q5SJ76 39039256
    903165 8vtv:2p (2.55) BS01 rna N/A GO:0003735 ... Q5SJH3 39039256
    903166 8vtv:2q (2.55) BS01 rna N/A GO:0003735 ... P0DOY7 39039256
    903167 8vtv:2q (2.55) BS02 MG N/A GO:0003735 ... P0DOY7 39039256
    903168 8vtv:2q (2.55) BS03 MG N/A GO:0003735 ... P0DOY7 39039256
    903169 8vtv:2r (2.55) BS01 rna N/A GO:0003735 ... Q5SLQ0 39039256
    903170 8vtv:2s (2.55) BS01 rna N/A GO:0000028 ... Q5SHP2 39039256
    903171 8vtv:2t (2.55) BS01 rna N/A GO:0003723 ... P80380 39039256
    903172 8vtw:10 (2.35) BS01 rna N/A GO:0003735 ... P60493 39039256
    903173 8vtw:10 (2.35) BS02 rna N/A GO:0003735 ... P60493 39039256
    903174 8vtw:10 (2.35) BS03 MG N/A GO:0003735 ... P60493 39039256
    903175 8vtw:10 (2.35) BS04 MG N/A GO:0003735 ... P60493 39039256
    903176 8vtw:10 (2.35) BS05 MG N/A GO:0003735 ... P60493 39039256
    903177 8vtw:11 (2.35) BS01 rna N/A GO:0003735 ... P60494 39039256
    903178 8vtw:11 (2.35) BS02 MG N/A GO:0003735 ... P60494 39039256
    903179 8vtw:12 (2.35) BS01 rna N/A GO:0003735 ... Q5SHP6 39039256
    903180 8vtw:13 (2.35) BS01 rna N/A GO:0003735 ... Q5SHQ6 39039256
    903181 8vtw:13 (2.35) BS02 rna N/A GO:0003735 ... Q5SHQ6 39039256
    903182 8vtw:13 (2.35) BS03 MG N/A GO:0003735 ... Q5SHQ6 39039256
    903183 8vtw:13 (2.35) BS04 MG N/A GO:0003735 ... Q5SHQ6 39039256
    903184 8vtw:14 (2.35) BS01 rna N/A GO:0003735 ... Q5SJE1 39039256
    903185 8vtw:14 (2.35) BS02 ZN N/A GO:0003735 ... Q5SJE1 39039256
    903186 8vtw:15 (2.35) BS01 rna N/A GO:0003735 ... P80339 39039256
    903187 8vtw:15 (2.35) BS02 MG N/A GO:0003735 ... P80339 39039256
    903188 8vtw:15 (2.35) BS03 MG N/A GO:0003735 ... P80339 39039256
    903189 8vtw:15 (2.35) BS04 ZN N/A GO:0003735 ... P80339 39039256
    903190 8vtw:16 (2.35) BS01 rna N/A GO:0003735 ... P35871 39039256
    903191 8vtw:16 (2.35) BS02 ZN N/A GO:0003735 ... P35871 39039256
    903192 8vtw:17 (2.35) BS01 rna N/A GO:0003735 ... P80340 39039256
    903193 8vtw:17 (2.35) BS02 MG N/A GO:0003735 ... P80340 39039256
    903194 8vtw:17 (2.35) BS03 MG N/A GO:0003735 ... P80340 39039256
    903195 8vtw:18 (2.35) BS01 rna N/A GO:0003735 ... Q5SKU1 39039256
    903196 8vtw:18 (2.35) BS02 MG N/A GO:0003735 ... Q5SKU1 39039256
    903197 8vtw:18 (2.35) BS03 MG N/A GO:0003735 ... Q5SKU1 39039256
    903198 8vtw:19 (2.35) BS01 rna N/A GO:0003735 ... Q5SHR2 39039256
    903199 8vtw:19 (2.35) BS02 ZN N/A GO:0003735 ... Q5SHR2 39039256
    903200 8vtw:1D (2.35) BS01 rna N/A GO:0002181 ... P60405 39039256

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).