SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    903201 8wo5:BV (7.4) BS01 peptide N/A GO:0003774 ... P15928 N/A
    903202 8wo5:Ba (7.4) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    903203 8wo5:Ba (7.4) BS02 peptide N/A GO:0003774 ... P0A1J9 N/A
    903204 8wo5:Bg (7.4) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    903205 8wo5:Bg (7.4) BS02 peptide N/A GO:0003774 ... P0A1J9 N/A
    903206 8wo5:Bm (7.4) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    903207 8wo5:Bm (7.4) BS02 peptide N/A GO:0003774 ... P0A1J9 N/A
    903208 8wo5:Bs (7.4) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    903209 8wo5:Bs (7.4) BS02 peptide N/A GO:0003774 ... P0A1J9 N/A
    903210 8wo5:By (7.4) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    903211 8wo5:By (7.4) BS02 peptide N/A GO:0003774 ... P0A1J9 N/A
    903212 8wo5:C6 (7.4) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    903213 8wo5:C6 (7.4) BS02 peptide N/A GO:0003774 ... P0A1J9 N/A
    903214 8wo5:CA (7.4) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    903215 8wo5:CA (7.4) BS02 peptide N/A GO:0003774 ... P0A1J9 N/A
    903216 8wo5:CG (7.4) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    903217 8wo5:CG (7.4) BS02 peptide N/A GO:0003774 ... P0A1J9 N/A
    903218 8wo5:CM (7.4) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    903219 8wo5:CM (7.4) BS02 peptide N/A GO:0003774 ... P0A1J9 N/A
    903220 8wo5:CS (7.4) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    903221 8wo5:CS (7.4) BS02 peptide N/A GO:0003774 ... P0A1J9 N/A
    903222 8wo5:CY (7.4) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    903223 8wo5:CY (7.4) BS02 peptide N/A GO:0003774 ... P0A1J9 N/A
    903224 8wo5:Ce (7.4) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    903225 8wo5:Ce (7.4) BS02 peptide N/A GO:0003774 ... P0A1J9 N/A
    903226 8wo5:Ck (7.4) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    903227 8wo5:Ck (7.4) BS02 peptide N/A GO:0003774 ... P0A1J9 N/A
    903228 8wo5:Cq (7.4) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    903229 8wo5:Cq (7.4) BS02 peptide N/A GO:0003774 ... P0A1J9 N/A
    903230 8wo5:Cw (7.4) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    903231 8wo5:Cw (7.4) BS02 peptide N/A GO:0003774 ... P0A1J9 N/A
    903232 8wo5:D1 (7.4) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    903233 8wo5:D1 (7.4) BS02 peptide N/A GO:0003774 ... P0A1J9 N/A
    903234 8wo5:D7 (7.4) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    903235 8wo5:D7 (7.4) BS02 peptide N/A GO:0003774 ... P0A1J9 N/A
    903236 8wo5:DB (7.4) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    903237 8wo5:DB (7.4) BS02 peptide N/A GO:0003774 ... P0A1J9 N/A
    903238 8wo5:DD (7.4) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    903239 8wo5:DD (7.4) BS02 peptide N/A GO:0003774 ... P0A1J9 N/A
    903240 8wo5:DJ (7.4) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    903241 8wo5:DJ (7.4) BS02 peptide N/A GO:0003774 ... P0A1J9 N/A
    903242 8wo5:DQ (7.4) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    903243 8wo5:DQ (7.4) BS02 peptide N/A GO:0003774 ... P0A1J9 N/A
    903244 8wo5:DW (7.4) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    903245 8wo5:DW (7.4) BS02 peptide N/A GO:0003774 ... P0A1J9 N/A
    903246 8wo5:Dc (7.4) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    903247 8wo5:Dc (7.4) BS02 peptide N/A GO:0003774 ... P0A1J9 N/A
    903248 8wo5:Di (7.4) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    903249 8wo5:Di (7.4) BS02 peptide N/A GO:0003774 ... P0A1J9 N/A
    903250 8wo5:Do (7.4) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    903251 8wo5:Do (7.4) BS02 peptide N/A GO:0003774 ... P0A1J9 N/A
    903252 8wo5:Du (7.4) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    903253 8wo5:Du (7.4) BS02 peptide N/A GO:0003774 ... P0A1J9 N/A
    903254 8wo5:EE (7.4) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    903255 8wo5:EE (7.4) BS02 peptide N/A GO:0003774 ... P0A1J9 N/A
    903256 8wo5:EK (7.4) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    903257 8wo5:EK (7.4) BS02 peptide N/A GO:0003774 ... P0A1J9 N/A
    903258 8wo5:EQ (7.4) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    903259 8wo5:EQ (7.4) BS02 peptide N/A GO:0003774 ... P0A1J9 N/A
    903260 8wo5:EW (7.4) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    903261 8wo5:EW (7.4) BS02 peptide N/A GO:0003774 ... P0A1J9 N/A
    903262 8wo5:Ea (7.4) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    903263 8wo5:Ea (7.4) BS02 peptide N/A GO:0003774 ... P0A1J9 N/A
    903264 8wo5:Eg (7.4) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    903265 8wo5:Eg (7.4) BS02 peptide N/A GO:0003774 ... P0A1J9 N/A
    903266 8wo5:Em (7.4) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    903267 8wo5:Em (7.4) BS02 peptide N/A GO:0003774 ... P0A1J9 N/A
    903268 8wo8:A (2.78) BS01 rna 3.1.26.- GO:0003723 ... Q8U4Q7 38302756
    903269 8wo9:A (1.55) BS01 peptide N/A N/A N/A N/A
    903270 8woe:A0 (4.3) BS01 peptide N/A GO:0009288 ... P16437 N/A
    903271 8woe:A0 (4.3) BS02 peptide N/A GO:0009288 ... P16437 N/A
    903272 8woe:A5 (4.3) BS01 peptide N/A GO:0003774 ... P26462 N/A
    903273 8woe:A6 (4.3) BS01 peptide N/A GO:0009288 ... P16437 N/A
    903274 8woe:A6 (4.3) BS02 peptide N/A GO:0009288 ... P16437 N/A
    903275 8woe:A7 (4.3) BS01 peptide N/A GO:0009288 ... P16437 N/A
    903276 8woe:A7 (4.3) BS02 peptide N/A GO:0009288 ... P16437 N/A
    903277 8woe:A8 (4.3) BS01 peptide N/A GO:0009288 ... P16437 N/A
    903278 8woe:A8 (4.3) BS02 peptide N/A GO:0009288 ... P16437 N/A
    903279 8woe:A9 (4.3) BS01 peptide N/A GO:0009288 ... P16437 N/A
    903280 8woe:A9 (4.3) BS02 peptide N/A GO:0009288 ... P16437 N/A
    903281 8woe:AA (4.3) BS01 peptide N/A GO:0009288 ... P16323 N/A
    903282 8woe:AA (4.3) BS02 peptide N/A GO:0009288 ... P16323 N/A
    903283 8woe:AB (4.3) BS01 peptide N/A GO:0009288 ... P16323 N/A
    903284 8woe:AB (4.3) BS02 peptide N/A GO:0009288 ... P16323 N/A
    903285 8woe:AC (4.3) BS01 peptide N/A GO:0009288 ... P16323 N/A
    903286 8woe:AC (4.3) BS02 peptide N/A GO:0009288 ... P16323 N/A
    903287 8woe:AD (4.3) BS01 peptide N/A GO:0009288 ... P16323 N/A
    903288 8woe:AD (4.3) BS02 peptide N/A GO:0009288 ... P16323 N/A
    903289 8woe:AE (4.3) BS01 peptide N/A GO:0009288 ... P16323 N/A
    903290 8woe:AE (4.3) BS02 peptide N/A GO:0009288 ... P16323 N/A
    903291 8woe:AI (4.3) BS01 peptide N/A GO:0009288 ... P0A1J3 N/A
    903292 8woe:AV (4.3) BS01 peptide N/A GO:0003774 ... P15928 N/A
    903293 8woe:Ao (4.3) BS01 peptide N/A GO:0003774 ... P15928 N/A
    903294 8woe:B5 (4.3) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    903295 8woe:BA (4.3) BS01 peptide N/A GO:0009288 ... P0A1I7 N/A
    903296 8woe:BA (4.3) BS02 peptide N/A GO:0009288 ... P0A1I7 N/A
    903297 8woe:BB (4.3) BS01 peptide N/A GO:0009288 ... P0A1I7 N/A
    903298 8woe:BC (4.3) BS01 peptide N/A GO:0009288 ... P0A1I7 N/A
    903299 8woe:BD (4.3) BS01 peptide N/A GO:0009288 ... P0A1I7 N/A
    903300 8woe:BE (4.3) BS01 peptide N/A GO:0009288 ... P0A1I7 N/A
    903301 8woe:BF (4.3) BS01 peptide N/A GO:0009288 ... P0A1I7 N/A
    903302 8woe:BF (4.3) BS02 peptide N/A GO:0009288 ... P0A1I7 N/A
    903303 8woe:Bc (4.3) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    903304 8woe:Bj (4.3) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    903305 8woe:Bq (4.3) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    903306 8woe:Bx (4.3) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    903307 8woe:C6 (4.3) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    903308 8woe:CB (4.3) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    903309 8woe:CI (4.3) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    903310 8woe:CP (4.3) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    903311 8woe:CW (4.3) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    903312 8woe:Cd (4.3) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    903313 8woe:Ck (4.3) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    903314 8woe:Cr (4.3) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    903315 8woe:Cy (4.3) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    903316 8woe:D3 (4.3) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    903317 8woe:D9 (4.3) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    903318 8woe:DA (4.3) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    903319 8woe:DG (4.3) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    903320 8woe:DY (4.3) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    903321 8woe:De (4.3) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    903322 8woe:Dk (4.3) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    903323 8woe:Dq (4.3) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    903324 8woe:Dw (4.3) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    903325 8woe:E1 (4.3) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    903326 8woe:E2 (4.3) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    903327 8woe:E3 (4.3) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    903328 8woe:E4 (4.3) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    903329 8woe:EC (4.3) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    903330 8woe:EJ (4.3) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    903331 8woe:EQ (4.3) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    903332 8woe:EX (4.3) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    903333 8woe:Ex (4.3) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    903334 8woe:Ey (4.3) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    903335 8woe:Ez (4.3) BS01 peptide N/A GO:0003774 ... P0A1J9 N/A
    903336 8wom:A (3.5) BS01 BLD ? GO:0005515 ... Q9LJX0 38513023
    903337 8woo:A (3.9) BS01 ANP ? GO:0005515 ... Q9LJX0 38513023
    903338 8woo:A (3.9) BS02 ANP ? GO:0005515 ... Q9LJX0 38513023
    903339 8woo:A (3.9) BS03 BLD ? GO:0005515 ... Q9LJX0 38513023
    903340 8wop:A (2.35) BS01 UDP 5.1.3.2 GO:0003978 ... Q9T0A7 38678521
    903341 8wop:A (2.35) BS02 NAD 5.1.3.2 GO:0003978 ... Q9T0A7 38678521
    903342 8wop:B (2.35) BS01 UDP 5.1.3.2 GO:0003978 ... Q9T0A7 38678521
    903343 8wop:B (2.35) BS02 NAD 5.1.3.2 GO:0003978 ... Q9T0A7 38678521
    903344 8woq:A (2.85) BS01 ZN ? GO:0016020 ... Q9NXL6 38378654
    903345 8woq:A (2.85) BS02 CA ? GO:0016020 ... Q9NXL6 38378654
    903346 8woq:A (2.85) BS03 CLR ? GO:0016020 ... Q9NXL6 38378654
    903347 8woq:A (2.85) BS04 CLR ? GO:0016020 ... Q9NXL6 38378654
    903348 8woq:A (2.85) BS05 CLR ? GO:0016020 ... Q9NXL6 38378654
    903349 8woq:A (2.85) BS06 SPL ? GO:0016020 ... Q9NXL6 38378654
    903350 8woq:B (2.85) BS01 ZN ? GO:0016020 ... Q9NXL6 38378654
    903351 8woq:B (2.85) BS02 CA ? GO:0016020 ... Q9NXL6 38378654
    903352 8woq:B (2.85) BS03 CLR ? GO:0016020 ... Q9NXL6 38378654
    903353 8woq:B (2.85) BS04 SPL ? GO:0016020 ... Q9NXL6 38378654
    903354 8woq:B (2.85) BS05 CLR ? GO:0016020 ... Q9NXL6 38378654
    903355 8woq:B (2.85) BS06 CLR ? GO:0016020 ... Q9NXL6 38378654
    903356 8woq:B (2.85) BS07 CLR ? GO:0016020 ... Q9NXL6 38378654
    903357 8woq:B (2.85) BS08 CLR ? GO:0016020 ... Q9NXL6 38378654
    903358 8wor:A (2.66) BS01 ZN ? GO:0016020 ... Q9NXL6 38378654
    903359 8wor:A (2.66) BS02 CA ? GO:0016020 ... Q9NXL6 38378654
    903360 8wor:A (2.66) BS03 CLR ? GO:0016020 ... Q9NXL6 38378654
    903361 8wor:A (2.66) BS04 CLR ? GO:0016020 ... Q9NXL6 38378654
    903362 8wor:A (2.66) BS05 CLR ? GO:0016020 ... Q9NXL6 38378654
    903363 8wor:A (2.66) BS06 SPL ? GO:0016020 ... Q9NXL6 38378654
    903364 8wor:A (2.66) BS07 CLR ? GO:0016020 ... Q9NXL6 38378654
    903365 8wor:B (2.66) BS01 ZN ? GO:0016020 ... Q9NXL6 38378654
    903366 8wor:B (2.66) BS02 CA ? GO:0016020 ... Q9NXL6 38378654
    903367 8wor:B (2.66) BS03 SPL ? GO:0016020 ... Q9NXL6 38378654
    903368 8wor:B (2.66) BS04 CLR ? GO:0016020 ... Q9NXL6 38378654
    903369 8wor:B (2.66) BS05 CLR ? GO:0016020 ... Q9NXL6 38378654
    903370 8wor:B (2.66) BS06 CLR ? GO:0016020 ... Q9NXL6 38378654
    903371 8wor:B (2.66) BS07 CLR ? GO:0016020 ... Q9NXL6 38378654
    903372 8wos:A (3.37) BS01 CLR ? GO:0016020 ... Q9NXL6 38378654
    903373 8wos:A (3.37) BS02 CLR ? GO:0016020 ... Q9NXL6 38378654
    903374 8wos:A (3.37) BS03 CLR ? GO:0016020 ... Q9NXL6 38378654
    903375 8wos:A (3.37) BS04 ZN ? GO:0016020 ... Q9NXL6 38378654
    903376 8wos:B (3.37) BS01 CLR ? GO:0016020 ... Q9NXL6 38378654
    903377 8wos:B (3.37) BS02 CLR ? GO:0016020 ... Q9NXL6 38378654
    903378 8wos:B (3.37) BS03 CLR ? GO:0016020 ... Q9NXL6 38378654
    903379 8wos:B (3.37) BS04 ZN ? GO:0016020 ... Q9NXL6 38378654
    903380 8wot:A (3.18) BS01 CLR ? GO:0016020 ... Q9NXL6 38378654
    903381 8wot:A (3.18) BS02 CLR ? GO:0016020 ... Q9NXL6 38378654
    903382 8wot:A (3.18) BS03 CLR ? GO:0016020 ... Q9NXL6 38378654
    903383 8wot:A (3.18) BS04 ZN ? GO:0016020 ... Q9NXL6 38378654
    903384 8wot:B (3.18) BS01 CLR ? GO:0016020 ... Q9NXL6 38378654
    903385 8wot:B (3.18) BS02 CLR ? GO:0016020 ... Q9NXL6 38378654
    903386 8wot:B (3.18) BS03 CLR ? GO:0016020 ... Q9NXL6 38378654
    903387 8wot:B (3.18) BS04 ZN ? GO:0016020 ... Q9NXL6 38378654
    903388 8wov:A (2.25) BS01 UDP 5.1.3.2 GO:0003978 ... Q9T0A7 38678521
    903389 8wov:A (2.25) BS02 NAD 5.1.3.2 GO:0003978 ... Q9T0A7 38678521
    903390 8wov:B (2.25) BS01 NAD 5.1.3.2 GO:0003978 ... Q9T0A7 38678521
    903391 8wov:B (2.25) BS02 UDP 5.1.3.2 GO:0003978 ... Q9T0A7 38678521
    903392 8wow:A (2.6) BS01 UDP 5.1.3.2 GO:0003978 ... Q9T0A7 38678521
    903393 8wow:A (2.6) BS02 NAD 5.1.3.2 GO:0003978 ... Q9T0A7 38678521
    903394 8wow:B (2.6) BS01 UDP 5.1.3.2 GO:0003978 ... Q9T0A7 38678521
    903395 8wow:B (2.6) BS02 NAD 5.1.3.2 GO:0003978 ... Q9T0A7 38678521
    903396 8wox:A (2.75) BS01 ZN 3.4.-.-
    3.4.17.23
    GO:0006508 ... G1TEF4 38112468
    903397 8woy:A (3.14) BS01 ZN 3.4.-.-
    3.4.17.23
    GO:0006508 ... G1TEF4 38112468
    903398 8woz:A (3.25) BS01 ZN 3.4.-.-
    3.4.17.23
    GO:0006508 ... G1TEF4 38112468
    903399 8wp0:A (3.4) BS01 ATP ? GO:0005515 ... Q9LJX0 38513023
    903400 8wp0:A (3.4) BS02 ATP ? GO:0005515 ... Q9LJX0 38513023

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).