SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    903401 8vtw:2p (2.35) BS01 rna N/A GO:0003735 ... Q5SJH3 39039256
    903402 8vtw:2q (2.35) BS01 rna N/A GO:0003735 ... P0DOY7 39039256
    903403 8vtw:2r (2.35) BS01 rna N/A GO:0003735 ... Q5SLQ0 39039256
    903404 8vtw:2s (2.35) BS01 rna N/A GO:0000028 ... Q5SHP2 39039256
    903405 8vtw:2t (2.35) BS01 rna N/A GO:0003723 ... P80380 39039256
    903406 8vtw:2t (2.35) BS02 MG N/A GO:0003723 ... P80380 39039256
    903407 8vtw:2y (2.35) BS01 rna N/A GO:0005515 ... P0AD49 39039256
    903408 8vtx:10 (2.4) BS01 rna N/A GO:0003735 ... P60493 39039256
    903409 8vtx:10 (2.4) BS02 rna N/A GO:0003735 ... P60493 39039256
    903410 8vtx:10 (2.4) BS03 rna N/A GO:0003735 ... P60493 39039256
    903411 8vtx:10 (2.4) BS04 MG N/A GO:0003735 ... P60493 39039256
    903412 8vtx:10 (2.4) BS05 MG N/A GO:0003735 ... P60493 39039256
    903413 8vtx:10 (2.4) BS06 MG N/A GO:0003735 ... P60493 39039256
    903414 8vtx:11 (2.4) BS01 rna N/A GO:0003735 ... P60494 39039256
    903415 8vtx:11 (2.4) BS02 rna N/A GO:0003735 ... P60494 39039256
    903416 8vtx:11 (2.4) BS03 MG N/A GO:0003735 ... P60494 39039256
    903417 8vtx:12 (2.4) BS01 rna N/A GO:0003735 ... Q5SHP6 39039256
    903418 8vtx:12 (2.4) BS02 MG N/A GO:0003735 ... Q5SHP6 39039256
    903419 8vtx:13 (2.4) BS01 rna N/A GO:0003735 ... Q5SHQ6 39039256
    903420 8vtx:13 (2.4) BS02 rna N/A GO:0003735 ... Q5SHQ6 39039256
    903421 8vtx:13 (2.4) BS03 MG N/A GO:0003735 ... Q5SHQ6 39039256
    903422 8vtx:13 (2.4) BS04 MG N/A GO:0003735 ... Q5SHQ6 39039256
    903423 8vtx:14 (2.4) BS01 rna N/A GO:0003735 ... Q5SJE1 39039256
    903424 8vtx:14 (2.4) BS02 ZN N/A GO:0003735 ... Q5SJE1 39039256
    903425 8vtx:15 (2.4) BS01 rna N/A GO:0003735 ... P80339 39039256
    903426 8vtx:15 (2.4) BS02 MG N/A GO:0003735 ... P80339 39039256
    903427 8vtx:15 (2.4) BS03 ZN N/A GO:0003735 ... P80339 39039256
    903428 8vtx:16 (2.4) BS01 rna N/A GO:0003735 ... P35871 39039256
    903429 8vtx:16 (2.4) BS02 MG N/A GO:0003735 ... P35871 39039256
    903430 8vtx:16 (2.4) BS03 MG N/A GO:0003735 ... P35871 39039256
    903431 8vtx:16 (2.4) BS04 ZN N/A GO:0003735 ... P35871 39039256
    903432 8vtx:17 (2.4) BS01 rna N/A GO:0003735 ... P80340 39039256
    903433 8vtx:17 (2.4) BS02 MG N/A GO:0003735 ... P80340 39039256
    903434 8vtx:17 (2.4) BS03 MG N/A GO:0003735 ... P80340 39039256
    903435 8vtx:17 (2.4) BS04 MG N/A GO:0003735 ... P80340 39039256
    903436 8vtx:18 (2.4) BS01 rna N/A GO:0003735 ... Q5SKU1 39039256
    903437 8vtx:18 (2.4) BS02 MG N/A GO:0003735 ... Q5SKU1 39039256
    903438 8vtx:18 (2.4) BS03 MG N/A GO:0003735 ... Q5SKU1 39039256
    903439 8vtx:19 (2.4) BS01 rna N/A GO:0003735 ... Q5SHR2 39039256
    903440 8vtx:19 (2.4) BS02 ZN N/A GO:0003735 ... Q5SHR2 39039256
    903441 8vtx:1D (2.4) BS01 rna N/A GO:0002181 ... P60405 39039256
    903442 8vtx:1D (2.4) BS02 rna N/A GO:0002181 ... P60405 39039256
    903443 8vtx:1D (2.4) BS03 MG N/A GO:0002181 ... P60405 39039256
    903444 8vtx:1D (2.4) BS04 MG N/A GO:0002181 ... P60405 39039256
    903445 8vtx:1D (2.4) BS05 MG N/A GO:0002181 ... P60405 39039256
    903446 8vtx:1D (2.4) BS06 MG N/A GO:0002181 ... P60405 39039256
    903447 8vtx:1D (2.4) BS07 MG N/A GO:0002181 ... P60405 39039256
    903448 8vtx:1D (2.4) BS08 MG N/A GO:0002181 ... P60405 39039256
    903449 8vtx:1D (2.4) BS09 MG N/A GO:0002181 ... P60405 39039256
    903450 8vtx:1D (2.4) BS10 MG N/A GO:0002181 ... P60405 39039256
    903451 8vtx:1D (2.4) BS11 MG N/A GO:0002181 ... P60405 39039256
    903452 8vtx:1D (2.4) BS12 MG N/A GO:0002181 ... P60405 39039256
    903453 8vtx:1E (2.4) BS01 rna N/A GO:0003735 ... Q5SHN8 39039256
    903454 8vtx:1E (2.4) BS02 MG N/A GO:0003735 ... Q5SHN8 39039256
    903455 8vtx:1E (2.4) BS03 MG N/A GO:0003735 ... Q5SHN8 39039256
    903456 8vtx:1E (2.4) BS04 MG N/A GO:0003735 ... Q5SHN8 39039256
    903457 8vtx:1E (2.4) BS05 MG N/A GO:0003735 ... Q5SHN8 39039256
    903458 8vtx:1F (2.4) BS01 rna N/A GO:0003735 ... Q5SHN9 39039256
    903459 8vtx:1F (2.4) BS02 MG N/A GO:0003735 ... Q5SHN9 39039256
    903460 8vtx:1F (2.4) BS03 MG N/A GO:0003735 ... Q5SHN9 39039256
    903461 8vtx:1F (2.4) BS04 MG N/A GO:0003735 ... Q5SHN9 39039256
    903462 8vtx:1F (2.4) BS05 MG N/A GO:0003735 ... Q5SHN9 39039256
    903463 8vtx:1F (2.4) BS06 MG N/A GO:0003735 ... Q5SHN9 39039256
    903464 8vtx:1F (2.4) BS07 MG N/A GO:0003735 ... Q5SHN9 39039256
    903465 8vtx:1F (2.4) BS08 MG N/A GO:0003735 ... Q5SHN9 39039256
    903466 8vtx:1F (2.4) BS09 MG N/A GO:0003735 ... Q5SHN9 39039256
    903467 8vtx:1F (2.4) BS10 MG N/A GO:0003735 ... Q5SHN9 39039256
    903468 8vtx:1F (2.4) BS11 MG N/A GO:0003735 ... Q5SHN9 39039256
    903469 8vtx:1G (2.4) BS01 rna N/A GO:0000049 ... Q5SHQ0 39039256
    903470 8vtx:1G (2.4) BS02 rna N/A GO:0000049 ... Q5SHQ0 39039256
    903471 8vtx:1G (2.4) BS03 rna N/A GO:0000049 ... Q5SHQ0 39039256
    903472 8vtx:1G (2.4) BS04 MG N/A GO:0000049 ... Q5SHQ0 39039256
    903473 8vtx:1H (2.4) BS01 rna N/A GO:0002181 ... P0DOY8 39039256
    903474 8vtx:1I (2.4) BS01 rna N/A GO:0003735 ... Q5SLQ1 39039256
    903475 8vtx:1I (2.4) BS02 MG N/A GO:0003735 ... Q5SLQ1 39039256
    903476 8vtx:1N (2.4) BS01 rna N/A GO:0003729 ... P60488 39039256
    903477 8vtx:1N (2.4) BS02 MG N/A GO:0003729 ... P60488 39039256
    903478 8vtx:1N (2.4) BS03 MG N/A GO:0003729 ... P60488 39039256
    903479 8vtx:1N (2.4) BS04 MG N/A GO:0003729 ... P60488 39039256
    903480 8vtx:1O (2.4) BS01 rna N/A GO:0003735 ... Q5SHP8 39039256
    903481 8vtx:1O (2.4) BS02 rna N/A GO:0003735 ... Q5SHP8 39039256
    903482 8vtx:1O (2.4) BS03 MG N/A GO:0003735 ... Q5SHP8 39039256
    903483 8vtx:1O (2.4) BS04 MG N/A GO:0003735 ... Q5SHP8 39039256
    903484 8vtx:1P (2.4) BS01 rna N/A GO:0003735 ... Q5SHQ7 39039256
    903485 8vtx:1P (2.4) BS02 MG N/A GO:0003735 ... Q5SHQ7 39039256
    903486 8vtx:1P (2.4) BS03 MG N/A GO:0003735 ... Q5SHQ7 39039256
    903487 8vtx:1P (2.4) BS04 MG N/A GO:0003735 ... Q5SHQ7 39039256
    903488 8vtx:1P (2.4) BS05 MG N/A GO:0003735 ... Q5SHQ7 39039256
    903489 8vtx:1P (2.4) BS06 MG N/A GO:0003735 ... Q5SHQ7 39039256
    903490 8vtx:1Q (2.4) BS01 rna N/A GO:0003735 ... P60489 39039256
    903491 8vtx:1Q (2.4) BS02 rna N/A GO:0003735 ... P60489 39039256
    903492 8vtx:1Q (2.4) BS03 rna N/A GO:0003735 ... P60489 39039256
    903493 8vtx:1Q (2.4) BS04 rna N/A GO:0003735 ... P60489 39039256
    903494 8vtx:1Q (2.4) BS05 MG N/A GO:0003735 ... P60489 39039256
    903495 8vtx:1Q (2.4) BS06 MG N/A GO:0003735 ... P60489 39039256
    903496 8vtx:1Q (2.4) BS07 MG N/A GO:0003735 ... P60489 39039256
    903497 8vtx:1Q (2.4) BS08 MG N/A GO:0003735 ... P60489 39039256
    903498 8vtx:1Q (2.4) BS09 MG N/A GO:0003735 ... P60489 39039256
    903499 8vtx:1R (2.4) BS01 rna N/A GO:0003735 ... Q9Z9H5 39039256
    903500 8vtx:1R (2.4) BS02 MG N/A GO:0003735 ... Q9Z9H5 39039256
    903501 8vtx:1R (2.4) BS03 MG N/A GO:0003735 ... Q9Z9H5 39039256
    903502 8vtx:1R (2.4) BS04 MG N/A GO:0003735 ... Q9Z9H5 39039256
    903503 8vtx:1S (2.4) BS01 rna N/A GO:0003735 ... Q5SHQ4 39039256
    903504 8vtx:1S (2.4) BS02 rna N/A GO:0003735 ... Q5SHQ4 39039256
    903505 8vtx:1S (2.4) BS03 MG N/A GO:0003735 ... Q5SHQ4 39039256
    903506 8vtx:1S (2.4) BS04 MG N/A GO:0003735 ... Q5SHQ4 39039256
    903507 8vtx:1T (2.4) BS01 rna N/A GO:0003735 ... P60490 39039256
    903508 8vtx:1T (2.4) BS02 rna N/A GO:0003735 ... P60490 39039256
    903509 8vtx:1U (2.4) BS01 rna N/A GO:0000027 ... P60491 39039256
    903510 8vtx:1U (2.4) BS02 MG N/A GO:0000027 ... P60491 39039256
    903511 8vtx:1U (2.4) BS03 MG N/A GO:0000027 ... P60491 39039256
    903512 8vtx:1U (2.4) BS04 MG N/A GO:0000027 ... P60491 39039256
    903513 8vtx:1U (2.4) BS05 MG N/A GO:0000027 ... P60491 39039256
    903514 8vtx:1U (2.4) BS06 MG N/A GO:0000027 ... P60491 39039256
    903515 8vtx:1U (2.4) BS07 MG N/A GO:0000027 ... P60491 39039256
    903516 8vtx:1U (2.4) BS08 MG N/A GO:0000027 ... P60491 39039256
    903517 8vtx:1U (2.4) BS09 MG N/A GO:0000027 ... P60491 39039256
    903518 8vtx:1V (2.4) BS01 rna N/A GO:0003723 ... P60492 39039256
    903519 8vtx:1V (2.4) BS02 MG N/A GO:0003723 ... P60492 39039256
    903520 8vtx:1V (2.4) BS03 MG N/A GO:0003723 ... P60492 39039256
    903521 8vtx:1V (2.4) BS04 MG N/A GO:0003723 ... P60492 39039256
    903522 8vtx:1V (2.4) BS05 MG N/A GO:0003723 ... P60492 39039256
    903523 8vtx:1V (2.4) BS06 MG N/A GO:0003723 ... P60492 39039256
    903524 8vtx:1V (2.4) BS07 MG N/A GO:0003723 ... P60492 39039256
    903525 8vtx:1W (2.4) BS01 rna N/A GO:0003735 ... Q5SHP3 39039256
    903526 8vtx:1W (2.4) BS02 MG N/A GO:0003735 ... Q5SHP3 39039256
    903527 8vtx:1W (2.4) BS03 MG N/A GO:0003735 ... Q5SHP3 39039256
    903528 8vtx:1W (2.4) BS04 MG N/A GO:0003735 ... Q5SHP3 39039256
    903529 8vtx:1W (2.4) BS05 MG N/A GO:0003735 ... Q5SHP3 39039256
    903530 8vtx:1W (2.4) BS06 MG N/A GO:0003735 ... Q5SHP3 39039256
    903531 8vtx:1X (2.4) BS01 rna N/A GO:0003735 ... Q5SHP0 39039256
    903532 8vtx:1X (2.4) BS02 MG N/A GO:0003735 ... Q5SHP0 39039256
    903533 8vtx:1X (2.4) BS03 MG N/A GO:0003735 ... Q5SHP0 39039256
    903534 8vtx:1X (2.4) BS04 MG N/A GO:0003735 ... Q5SHP0 39039256
    903535 8vtx:1X (2.4) BS05 MG N/A GO:0003735 ... Q5SHP0 39039256
    903536 8vtx:1Y (2.4) BS01 rna N/A GO:0003723 ... Q5SHP9 39039256
    903537 8vtx:1Y (2.4) BS02 MG N/A GO:0003723 ... Q5SHP9 39039256
    903538 8vtx:1Y (2.4) BS03 ZN N/A GO:0003723 ... Q5SHP9 39039256
    903539 8vtx:1Z (2.4) BS01 rna N/A GO:0003723 ... Q5SHZ1 39039256
    903540 8vtx:1Z (2.4) BS02 rna N/A GO:0003723 ... Q5SHZ1 39039256
    903541 8vtx:1Z (2.4) BS03 MG N/A GO:0003723 ... Q5SHZ1 39039256
    903542 8vtx:1b (2.4) BS01 rna N/A GO:0003735 ... P80371 39039256
    903543 8vtx:1c (2.4) BS01 rna N/A GO:0003676 ... P80372 39039256
    903544 8vtx:1d (2.4) BS01 rna N/A GO:0003723 ... P80373 39039256
    903545 8vtx:1d (2.4) BS02 SF4 N/A GO:0003723 ... P80373 39039256
    903546 8vtx:1e (2.4) BS01 rna N/A GO:0003723 ... Q5SHQ5 39039256
    903547 8vtx:1e (2.4) BS02 MG N/A GO:0003723 ... Q5SHQ5 39039256
    903548 8vtx:1e (2.4) BS03 MG N/A GO:0003723 ... Q5SHQ5 39039256
    903549 8vtx:1f (2.4) BS01 rna N/A GO:0003735 ... Q5SLP8 39039256
    903550 8vtx:1f (2.4) BS02 MG N/A GO:0003735 ... Q5SLP8 39039256
    903551 8vtx:1g (2.4) BS01 rna N/A GO:0000049 ... P17291 39039256
    903552 8vtx:1g (2.4) BS02 rna N/A GO:0000049 ... P17291 39039256
    903553 8vtx:1h (2.4) BS01 rna N/A GO:0003735 ... P0DOY9 39039256
    903554 8vtx:1i (2.4) BS01 rna N/A GO:0003723 ... P80374 39039256
    903555 8vtx:1i (2.4) BS02 rna N/A GO:0003723 ... P80374 39039256
    903556 8vtx:1j (2.4) BS01 rna N/A GO:0000049 ... Q5SHN7 39039256
    903557 8vtx:1k (2.4) BS01 rna N/A GO:0003735 ... P80376 39039256
    903558 8vtx:1k (2.4) BS02 MG N/A GO:0003735 ... P80376 39039256
    903559 8vtx:1l (2.4) BS01 rna N/A GO:0000049 ... Q5SHN3 39039256
    903560 8vtx:1l (2.4) BS02 rna N/A GO:0000049 ... Q5SHN3 39039256
    903561 8vtx:1l (2.4) BS03 MG N/A GO:0000049 ... Q5SHN3 39039256
    903562 8vtx:1m (2.4) BS01 rna N/A GO:0000049 ... P80377 39039256
    903563 8vtx:1m (2.4) BS02 rna N/A GO:0000049 ... P80377 39039256
    903564 8vtx:1m (2.4) BS03 rna N/A GO:0000049 ... P80377 39039256
    903565 8vtx:1m (2.4) BS04 MG N/A GO:0000049 ... P80377 39039256
    903566 8vtx:1n (2.4) BS01 rna N/A GO:0003735 ... P0DOY6 39039256
    903567 8vtx:1n (2.4) BS02 ZN N/A GO:0003735 ... P0DOY6 39039256
    903568 8vtx:1o (2.4) BS01 rna N/A GO:0003735 ... Q5SJ76 39039256
    903569 8vtx:1o (2.4) BS02 rna N/A GO:0003735 ... Q5SJ76 39039256
    903570 8vtx:1p (2.4) BS01 rna N/A GO:0003735 ... Q5SJH3 39039256
    903571 8vtx:1q (2.4) BS01 rna N/A GO:0003735 ... P0DOY7 39039256
    903572 8vtx:1r (2.4) BS01 rna N/A GO:0003735 ... Q5SLQ0 39039256
    903573 8vtx:1s (2.4) BS01 rna N/A GO:0000028 ... Q5SHP2 39039256
    903574 8vtx:1t (2.4) BS01 rna N/A GO:0003723 ... P80380 39039256
    903575 8vtx:1t (2.4) BS02 MG N/A GO:0003723 ... P80380 39039256
    903576 8vtx:20 (2.4) BS01 rna N/A GO:0003735 ... P60493 39039256
    903577 8vtx:20 (2.4) BS02 rna N/A GO:0003735 ... P60493 39039256
    903578 8vtx:20 (2.4) BS03 rna N/A GO:0003735 ... P60493 39039256
    903579 8vtx:21 (2.4) BS01 rna N/A GO:0003735 ... P60494 39039256
    903580 8vtx:21 (2.4) BS02 rna N/A GO:0003735 ... P60494 39039256
    903581 8vtx:22 (2.4) BS01 rna N/A GO:0003735 ... Q5SHP6 39039256
    903582 8vtx:23 (2.4) BS01 rna N/A GO:0003735 ... Q5SHQ6 39039256
    903583 8vtx:23 (2.4) BS02 rna N/A GO:0003735 ... Q5SHQ6 39039256
    903584 8vtx:23 (2.4) BS03 MG N/A GO:0003735 ... Q5SHQ6 39039256
    903585 8vtx:24 (2.4) BS01 rna N/A GO:0003735 ... Q5SJE1 39039256
    903586 8vtx:24 (2.4) BS02 ZN N/A GO:0003735 ... Q5SJE1 39039256
    903587 8vtx:25 (2.4) BS01 rna N/A GO:0003735 ... P80339 39039256
    903588 8vtx:25 (2.4) BS02 ZN N/A GO:0003735 ... P80339 39039256
    903589 8vtx:26 (2.4) BS01 rna N/A GO:0003735 ... P35871 39039256
    903590 8vtx:26 (2.4) BS02 MG N/A GO:0003735 ... P35871 39039256
    903591 8vtx:26 (2.4) BS03 ZN N/A GO:0003735 ... P35871 39039256
    903592 8vtx:27 (2.4) BS01 rna N/A GO:0003735 ... P80340 39039256
    903593 8vtx:27 (2.4) BS02 MG N/A GO:0003735 ... P80340 39039256
    903594 8vtx:27 (2.4) BS03 MG N/A GO:0003735 ... P80340 39039256
    903595 8vtx:28 (2.4) BS01 rna N/A GO:0003735 ... Q5SKU1 39039256
    903596 8vtx:28 (2.4) BS02 MG N/A GO:0003735 ... Q5SKU1 39039256
    903597 8vtx:29 (2.4) BS01 rna N/A GO:0003735 ... Q5SHR2 39039256
    903598 8vtx:29 (2.4) BS02 ZN N/A GO:0003735 ... Q5SHR2 39039256
    903599 8vtx:2D (2.4) BS01 rna N/A GO:0002181 ... P60405 39039256
    903600 8vtx:2D (2.4) BS02 rna N/A GO:0002181 ... P60405 39039256

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).