SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    903801 8vty:1d (2.6) BS01 rna N/A GO:0003723 ... P80373 39039256
    903802 8vty:1d (2.6) BS02 SF4 N/A GO:0003723 ... P80373 39039256
    903803 8vty:1e (2.6) BS01 rna N/A GO:0003723 ... Q5SHQ5 39039256
    903804 8vty:1e (2.6) BS02 MG N/A GO:0003723 ... Q5SHQ5 39039256
    903805 8vty:1f (2.6) BS01 rna N/A GO:0003735 ... Q5SLP8 39039256
    903806 8vty:1g (2.6) BS01 rna N/A GO:0000049 ... P17291 39039256
    903807 8vty:1h (2.6) BS01 rna N/A GO:0003735 ... P0DOY9 39039256
    903808 8vty:1i (2.6) BS01 rna N/A GO:0003723 ... P80374 39039256
    903809 8vty:1j (2.6) BS01 rna N/A GO:0000049 ... Q5SHN7 39039256
    903810 8vty:1k (2.6) BS01 rna N/A GO:0003735 ... P80376 39039256
    903811 8vty:1k (2.6) BS02 MG N/A GO:0003735 ... P80376 39039256
    903812 8vty:1l (2.6) BS01 rna N/A GO:0000049 ... Q5SHN3 39039256
    903813 8vty:1l (2.6) BS02 MG N/A GO:0000049 ... Q5SHN3 39039256
    903814 8vty:1m (2.6) BS01 rna N/A GO:0000049 ... P80377 39039256
    903815 8vty:1m (2.6) BS02 MG N/A GO:0000049 ... P80377 39039256
    903816 8vty:1m (2.6) BS03 MG N/A GO:0000049 ... P80377 39039256
    903817 8vty:1n (2.6) BS01 rna N/A GO:0003735 ... P0DOY6 39039256
    903818 8vty:1n (2.6) BS02 MG N/A GO:0003735 ... P0DOY6 39039256
    903819 8vty:1n (2.6) BS03 ZN N/A GO:0003735 ... P0DOY6 39039256
    903820 8vty:1o (2.6) BS01 rna N/A GO:0003735 ... Q5SJ76 39039256
    903821 8vty:1o (2.6) BS02 rna N/A GO:0003735 ... Q5SJ76 39039256
    903822 8vty:1p (2.6) BS01 rna N/A GO:0003735 ... Q5SJH3 39039256
    903823 8vty:1q (2.6) BS01 rna N/A GO:0003735 ... P0DOY7 39039256
    903824 8vty:1r (2.6) BS01 rna N/A GO:0003735 ... Q5SLQ0 39039256
    903825 8vty:1s (2.6) BS01 rna N/A GO:0000028 ... Q5SHP2 39039256
    903826 8vty:1t (2.6) BS01 rna N/A GO:0003723 ... P80380 39039256
    903827 8vty:1t (2.6) BS02 MG N/A GO:0003723 ... P80380 39039256
    903828 8vty:1y (2.6) BS01 rna N/A GO:0005515 ... P0AD49 39039256
    903829 8vty:1y (2.6) BS02 MG N/A GO:0005515 ... P0AD49 39039256
    903830 8vty:1y (2.6) BS03 MG N/A GO:0005515 ... P0AD49 39039256
    903831 8vty:20 (2.6) BS01 rna N/A GO:0003735 ... P60493 39039256
    903832 8vty:20 (2.6) BS02 rna N/A GO:0003735 ... P60493 39039256
    903833 8vty:21 (2.6) BS01 rna N/A GO:0003735 ... P60494 39039256
    903834 8vty:22 (2.6) BS01 rna N/A GO:0003735 ... Q5SHP6 39039256
    903835 8vty:23 (2.6) BS01 rna N/A GO:0003735 ... Q5SHQ6 39039256
    903836 8vty:23 (2.6) BS02 rna N/A GO:0003735 ... Q5SHQ6 39039256
    903837 8vty:23 (2.6) BS03 MG N/A GO:0003735 ... Q5SHQ6 39039256
    903838 8vty:24 (2.6) BS01 rna N/A GO:0003735 ... Q5SJE1 39039256
    903839 8vty:24 (2.6) BS02 ZN N/A GO:0003735 ... Q5SJE1 39039256
    903840 8vty:25 (2.6) BS01 rna N/A GO:0003735 ... P80339 39039256
    903841 8vty:25 (2.6) BS02 ZN N/A GO:0003735 ... P80339 39039256
    903842 8vty:26 (2.6) BS01 rna N/A GO:0003735 ... P35871 39039256
    903843 8vty:26 (2.6) BS02 ZN N/A GO:0003735 ... P35871 39039256
    903844 8vty:27 (2.6) BS01 rna N/A GO:0003735 ... P80340 39039256
    903845 8vty:27 (2.6) BS02 MG N/A GO:0003735 ... P80340 39039256
    903846 8vty:27 (2.6) BS03 MG N/A GO:0003735 ... P80340 39039256
    903847 8vty:28 (2.6) BS01 rna N/A GO:0003735 ... Q5SKU1 39039256
    903848 8vty:29 (2.6) BS01 rna N/A GO:0003735 ... Q5SHR2 39039256
    903849 8vty:29 (2.6) BS02 ZN N/A GO:0003735 ... Q5SHR2 39039256
    903850 8vty:2D (2.6) BS01 rna N/A GO:0002181 ... P60405 39039256
    903851 8vty:2D (2.6) BS02 rna N/A GO:0002181 ... P60405 39039256
    903852 8vty:2D (2.6) BS03 MG N/A GO:0002181 ... P60405 39039256
    903853 8vty:2D (2.6) BS04 MG N/A GO:0002181 ... P60405 39039256
    903854 8vty:2D (2.6) BS05 MG N/A GO:0002181 ... P60405 39039256
    903855 8vty:2D (2.6) BS06 MG N/A GO:0002181 ... P60405 39039256
    903856 8vty:2D (2.6) BS07 MG N/A GO:0002181 ... P60405 39039256
    903857 8vty:2D (2.6) BS08 MG N/A GO:0002181 ... P60405 39039256
    903858 8vty:2D (2.6) BS09 MG N/A GO:0002181 ... P60405 39039256
    903859 8vty:2D (2.6) BS10 MG N/A GO:0002181 ... P60405 39039256
    903860 8vty:2E (2.6) BS01 rna N/A GO:0003735 ... Q5SHN8 39039256
    903861 8vty:2E (2.6) BS02 MG N/A GO:0003735 ... Q5SHN8 39039256
    903862 8vty:2E (2.6) BS03 MG N/A GO:0003735 ... Q5SHN8 39039256
    903863 8vty:2F (2.6) BS01 rna N/A GO:0003735 ... Q5SHN9 39039256
    903864 8vty:2F (2.6) BS02 MG N/A GO:0003735 ... Q5SHN9 39039256
    903865 8vty:2F (2.6) BS03 MG N/A GO:0003735 ... Q5SHN9 39039256
    903866 8vty:2F (2.6) BS04 MG N/A GO:0003735 ... Q5SHN9 39039256
    903867 8vty:2F (2.6) BS05 MG N/A GO:0003735 ... Q5SHN9 39039256
    903868 8vty:2G (2.6) BS01 rna N/A GO:0000049 ... Q5SHQ0 39039256
    903869 8vty:2G (2.6) BS02 rna N/A GO:0000049 ... Q5SHQ0 39039256
    903870 8vty:2G (2.6) BS03 MG N/A GO:0000049 ... Q5SHQ0 39039256
    903871 8vty:2G (2.6) BS04 MG N/A GO:0000049 ... Q5SHQ0 39039256
    903872 8vty:2H (2.6) BS01 rna N/A GO:0002181 ... P0DOY8 39039256
    903873 8vty:2I (2.6) BS01 rna N/A GO:0003735 ... Q5SLQ1 39039256
    903874 8vty:2N (2.6) BS01 rna N/A GO:0003729 ... P60488 39039256
    903875 8vty:2O (2.6) BS01 rna N/A GO:0003735 ... Q5SHP8 39039256
    903876 8vty:2O (2.6) BS02 rna N/A GO:0003735 ... Q5SHP8 39039256
    903877 8vty:2P (2.6) BS01 rna N/A GO:0003735 ... Q5SHQ7 39039256
    903878 8vty:2Q (2.6) BS01 rna N/A GO:0003735 ... P60489 39039256
    903879 8vty:2Q (2.6) BS02 rna N/A GO:0003735 ... P60489 39039256
    903880 8vty:2Q (2.6) BS03 MG N/A GO:0003735 ... P60489 39039256
    903881 8vty:2Q (2.6) BS04 MG N/A GO:0003735 ... P60489 39039256
    903882 8vty:2R (2.6) BS01 rna N/A GO:0003735 ... Q9Z9H5 39039256
    903883 8vty:2S (2.6) BS01 rna N/A GO:0003735 ... Q5SHQ4 39039256
    903884 8vty:2S (2.6) BS02 rna N/A GO:0003735 ... Q5SHQ4 39039256
    903885 8vty:2T (2.6) BS01 rna N/A GO:0003735 ... P60490 39039256
    903886 8vty:2T (2.6) BS02 rna N/A GO:0003735 ... P60490 39039256
    903887 8vty:2U (2.6) BS01 rna N/A GO:0000027 ... P60491 39039256
    903888 8vty:2U (2.6) BS02 MG N/A GO:0000027 ... P60491 39039256
    903889 8vty:2V (2.6) BS01 rna N/A GO:0003723 ... P60492 39039256
    903890 8vty:2V (2.6) BS02 MG N/A GO:0003723 ... P60492 39039256
    903891 8vty:2V (2.6) BS03 MG N/A GO:0003723 ... P60492 39039256
    903892 8vty:2W (2.6) BS01 rna N/A GO:0003735 ... Q5SHP3 39039256
    903893 8vty:2W (2.6) BS02 MG N/A GO:0003735 ... Q5SHP3 39039256
    903894 8vty:2W (2.6) BS03 MG N/A GO:0003735 ... Q5SHP3 39039256
    903895 8vty:2X (2.6) BS01 rna N/A GO:0003735 ... Q5SHP0 39039256
    903896 8vty:2Y (2.6) BS01 rna N/A GO:0003723 ... Q5SHP9 39039256
    903897 8vty:2Y (2.6) BS02 ZN N/A GO:0003723 ... Q5SHP9 39039256
    903898 8vty:2Z (2.6) BS01 rna N/A GO:0003723 ... Q5SHZ1 39039256
    903899 8vty:2Z (2.6) BS02 rna N/A GO:0003723 ... Q5SHZ1 39039256
    903900 8vty:2b (2.6) BS01 rna N/A GO:0003735 ... P80371 39039256
    903901 8vty:2c (2.6) BS01 rna N/A GO:0003676 ... P80372 39039256
    903902 8vty:2d (2.6) BS01 rna N/A GO:0003723 ... P80373 39039256
    903903 8vty:2d (2.6) BS02 SF4 N/A GO:0003723 ... P80373 39039256
    903904 8vty:2e (2.6) BS01 rna N/A GO:0003723 ... Q5SHQ5 39039256
    903905 8vty:2f (2.6) BS01 rna N/A GO:0003735 ... Q5SLP8 39039256
    903906 8vty:2f (2.6) BS02 MG N/A GO:0003735 ... Q5SLP8 39039256
    903907 8vty:2f (2.6) BS03 MG N/A GO:0003735 ... Q5SLP8 39039256
    903908 8vty:2g (2.6) BS01 rna N/A GO:0000049 ... P17291 39039256
    903909 8vty:2h (2.6) BS01 rna N/A GO:0003735 ... P0DOY9 39039256
    903910 8vty:2i (2.6) BS01 rna N/A GO:0003723 ... P80374 39039256
    903911 8vty:2j (2.6) BS01 rna N/A GO:0000049 ... Q5SHN7 39039256
    903912 8vty:2j (2.6) BS02 MG N/A GO:0000049 ... Q5SHN7 39039256
    903913 8vty:2k (2.6) BS01 rna N/A GO:0003735 ... P80376 39039256
    903914 8vty:2k (2.6) BS02 MG N/A GO:0003735 ... P80376 39039256
    903915 8vty:2l (2.6) BS01 rna N/A GO:0000049 ... Q5SHN3 39039256
    903916 8vty:2l (2.6) BS02 MG N/A GO:0000049 ... Q5SHN3 39039256
    903917 8vty:2m (2.6) BS01 rna N/A GO:0000049 ... P80377 39039256
    903918 8vty:2n (2.6) BS01 rna N/A GO:0003735 ... P0DOY6 39039256
    903919 8vty:2n (2.6) BS02 ZN N/A GO:0003735 ... P0DOY6 39039256
    903920 8vty:2o (2.6) BS01 rna N/A GO:0003735 ... Q5SJ76 39039256
    903921 8vty:2o (2.6) BS02 rna N/A GO:0003735 ... Q5SJ76 39039256
    903922 8vty:2p (2.6) BS01 rna N/A GO:0003735 ... Q5SJH3 39039256
    903923 8vty:2q (2.6) BS01 rna N/A GO:0003735 ... P0DOY7 39039256
    903924 8vty:2r (2.6) BS01 rna N/A GO:0003735 ... Q5SLQ0 39039256
    903925 8vty:2s (2.6) BS01 rna N/A GO:0000028 ... Q5SHP2 39039256
    903926 8vty:2t (2.6) BS01 rna N/A GO:0003723 ... P80380 39039256
    903927 8vty:2t (2.6) BS02 MG N/A GO:0003723 ... P80380 39039256
    903928 8vty:2y (2.6) BS01 rna N/A GO:0005515 ... P0AD49 39039256
    903929 8vu0:A (2.64) BS01 rna N/A GO:0000049 ... O66738 39075051
    903930 8vu0:B (2.64) BS01 rna N/A GO:0000049 ... O66738 39075051
    903931 8vu3:A (2.27) BS01 CL0 N/A GO:0000287 ... A0A2D2Q201 39496605
    903932 8vu3:A (2.27) BS02 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    903933 8vu3:A (2.27) BS03 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    903934 8vu3:A (2.27) BS04 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    903935 8vu3:A (2.27) BS05 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    903936 8vu3:A (2.27) BS06 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    903937 8vu3:A (2.27) BS07 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    903938 8vu3:A (2.27) BS08 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    903939 8vu3:A (2.27) BS09 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    903940 8vu3:A (2.27) BS10 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    903941 8vu3:A (2.27) BS11 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    903942 8vu3:A (2.27) BS12 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    903943 8vu3:A (2.27) BS13 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    903944 8vu3:A (2.27) BS14 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    903945 8vu3:A (2.27) BS15 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    903946 8vu3:A (2.27) BS16 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    903947 8vu3:A (2.27) BS17 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    903948 8vu3:A (2.27) BS18 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    903949 8vu3:A (2.27) BS19 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    903950 8vu3:A (2.27) BS20 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    903951 8vu3:A (2.27) BS21 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    903952 8vu3:A (2.27) BS22 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    903953 8vu3:A (2.27) BS23 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    903954 8vu3:A (2.27) BS24 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    903955 8vu3:A (2.27) BS25 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    903956 8vu3:A (2.27) BS26 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    903957 8vu3:A (2.27) BS27 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    903958 8vu3:A (2.27) BS28 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    903959 8vu3:A (2.27) BS29 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    903960 8vu3:A (2.27) BS30 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    903961 8vu3:A (2.27) BS31 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    903962 8vu3:A (2.27) BS32 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    903963 8vu3:A (2.27) BS33 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    903964 8vu3:A (2.27) BS34 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    903965 8vu3:A (2.27) BS35 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    903966 8vu3:A (2.27) BS36 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    903967 8vu3:A (2.27) BS37 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    903968 8vu3:A (2.27) BS38 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    903969 8vu3:A (2.27) BS39 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    903970 8vu3:A (2.27) BS40 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    903971 8vu3:A (2.27) BS41 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    903972 8vu3:A (2.27) BS42 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    903973 8vu3:A (2.27) BS43 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    903974 8vu3:A (2.27) BS44 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    903975 8vu3:A (2.27) BS45 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    903976 8vu3:A (2.27) BS46 PQN N/A GO:0000287 ... A0A2D2Q201 39496605
    903977 8vu3:A (2.27) BS47 SF4 N/A GO:0000287 ... A0A2D2Q201 39496605
    903978 8vu3:A (2.27) BS48 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    903979 8vu3:A (2.27) BS49 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    903980 8vu3:A (2.27) BS50 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    903981 8vu3:A (2.27) BS51 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    903982 8vu3:B (2.27) BS01 peptide N/A GO:0000287 ... A0A2D2Q1Z9 39496605
    903983 8vu3:B (2.27) BS02 CL0 N/A GO:0000287 ... A0A2D2Q1Z9 39496605
    903984 8vu3:B (2.27) BS03 CLA N/A GO:0000287 ... A0A2D2Q1Z9 39496605
    903985 8vu3:B (2.27) BS04 CLA N/A GO:0000287 ... A0A2D2Q1Z9 39496605
    903986 8vu3:B (2.27) BS05 CLA N/A GO:0000287 ... A0A2D2Q1Z9 39496605
    903987 8vu3:B (2.27) BS06 CLA N/A GO:0000287 ... A0A2D2Q1Z9 39496605
    903988 8vu3:B (2.27) BS07 CLA N/A GO:0000287 ... A0A2D2Q1Z9 39496605
    903989 8vu3:B (2.27) BS08 CLA N/A GO:0000287 ... A0A2D2Q1Z9 39496605
    903990 8vu3:B (2.27) BS09 SF4 N/A GO:0000287 ... A0A2D2Q1Z9 39496605
    903991 8vu3:B (2.27) BS10 CLA N/A GO:0000287 ... A0A2D2Q1Z9 39496605
    903992 8vu3:B (2.27) BS11 CLA N/A GO:0000287 ... A0A2D2Q1Z9 39496605
    903993 8vu3:B (2.27) BS12 CLA N/A GO:0000287 ... A0A2D2Q1Z9 39496605
    903994 8vu3:B (2.27) BS13 CLA N/A GO:0000287 ... A0A2D2Q1Z9 39496605
    903995 8vu3:B (2.27) BS14 CLA N/A GO:0000287 ... A0A2D2Q1Z9 39496605
    903996 8vu3:B (2.27) BS15 CLA N/A GO:0000287 ... A0A2D2Q1Z9 39496605
    903997 8vu3:B (2.27) BS16 CLA N/A GO:0000287 ... A0A2D2Q1Z9 39496605
    903998 8vu3:B (2.27) BS17 CLA N/A GO:0000287 ... A0A2D2Q1Z9 39496605
    903999 8vu3:B (2.27) BS18 CLA N/A GO:0000287 ... A0A2D2Q1Z9 39496605
    904000 8vu3:B (2.27) BS19 CLA N/A GO:0000287 ... A0A2D2Q1Z9 39496605

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).