SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    904201 8vu3:a (2.27) BS09 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    904202 8vu3:a (2.27) BS10 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    904203 8vu3:a (2.27) BS11 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    904204 8vu3:a (2.27) BS12 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    904205 8vu3:a (2.27) BS13 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    904206 8vu3:a (2.27) BS14 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    904207 8vu3:a (2.27) BS15 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    904208 8vu3:a (2.27) BS16 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    904209 8vu3:a (2.27) BS17 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    904210 8vu3:a (2.27) BS18 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    904211 8vu3:a (2.27) BS19 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    904212 8vu3:a (2.27) BS20 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    904213 8vu3:a (2.27) BS21 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    904214 8vu3:a (2.27) BS22 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    904215 8vu3:a (2.27) BS23 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    904216 8vu3:a (2.27) BS24 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    904217 8vu3:a (2.27) BS25 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    904218 8vu3:a (2.27) BS26 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    904219 8vu3:a (2.27) BS27 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    904220 8vu3:a (2.27) BS28 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    904221 8vu3:a (2.27) BS29 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    904222 8vu3:a (2.27) BS30 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    904223 8vu3:a (2.27) BS31 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    904224 8vu3:a (2.27) BS32 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    904225 8vu3:a (2.27) BS33 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    904226 8vu3:a (2.27) BS34 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    904227 8vu3:a (2.27) BS35 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    904228 8vu3:a (2.27) BS36 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    904229 8vu3:a (2.27) BS37 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    904230 8vu3:a (2.27) BS38 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    904231 8vu3:a (2.27) BS39 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    904232 8vu3:a (2.27) BS40 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    904233 8vu3:a (2.27) BS41 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    904234 8vu3:a (2.27) BS42 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    904235 8vu3:a (2.27) BS43 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    904236 8vu3:a (2.27) BS44 PQN N/A GO:0000287 ... A0A2D2Q201 39496605
    904237 8vu3:a (2.27) BS45 SF4 N/A GO:0000287 ... A0A2D2Q201 39496605
    904238 8vu3:a (2.27) BS46 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    904239 8vu3:a (2.27) BS47 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    904240 8vu3:a (2.27) BS48 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    904241 8vu3:a (2.27) BS49 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    904242 8vu3:a (2.27) BS50 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    904243 8vu3:a (2.27) BS51 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    904244 8vu3:a (2.27) BS52 CLA N/A GO:0000287 ... A0A2D2Q201 39496605
    904245 8vu3:b (2.27) BS01 peptide N/A GO:0000287 ... A0A2D2Q1Z9 39496605
    904246 8vu3:b (2.27) BS02 CL0 N/A GO:0000287 ... A0A2D2Q1Z9 39496605
    904247 8vu3:b (2.27) BS03 CLA N/A GO:0000287 ... A0A2D2Q1Z9 39496605
    904248 8vu3:b (2.27) BS04 CLA N/A GO:0000287 ... A0A2D2Q1Z9 39496605
    904249 8vu3:b (2.27) BS05 CLA N/A GO:0000287 ... A0A2D2Q1Z9 39496605
    904250 8vu3:b (2.27) BS06 CLA N/A GO:0000287 ... A0A2D2Q1Z9 39496605
    904251 8vu3:b (2.27) BS07 SF4 N/A GO:0000287 ... A0A2D2Q1Z9 39496605
    904252 8vu3:b (2.27) BS08 CLA N/A GO:0000287 ... A0A2D2Q1Z9 39496605
    904253 8vu3:b (2.27) BS09 CLA N/A GO:0000287 ... A0A2D2Q1Z9 39496605
    904254 8vu3:b (2.27) BS10 CLA N/A GO:0000287 ... A0A2D2Q1Z9 39496605
    904255 8vu3:b (2.27) BS11 CLA N/A GO:0000287 ... A0A2D2Q1Z9 39496605
    904256 8vu3:b (2.27) BS12 CLA N/A GO:0000287 ... A0A2D2Q1Z9 39496605
    904257 8vu3:b (2.27) BS13 CLA N/A GO:0000287 ... A0A2D2Q1Z9 39496605
    904258 8vu3:b (2.27) BS14 CLA N/A GO:0000287 ... A0A2D2Q1Z9 39496605
    904259 8vu3:b (2.27) BS15 CLA N/A GO:0000287 ... A0A2D2Q1Z9 39496605
    904260 8vu3:b (2.27) BS16 CLA N/A GO:0000287 ... A0A2D2Q1Z9 39496605
    904261 8vu3:b (2.27) BS17 CLA N/A GO:0000287 ... A0A2D2Q1Z9 39496605
    904262 8vu3:b (2.27) BS18 CLA N/A GO:0000287 ... A0A2D2Q1Z9 39496605
    904263 8vu3:b (2.27) BS19 CLA N/A GO:0000287 ... A0A2D2Q1Z9 39496605
    904264 8vu3:b (2.27) BS20 CLA N/A GO:0000287 ... A0A2D2Q1Z9 39496605
    904265 8vu3:b (2.27) BS21 CLA N/A GO:0000287 ... A0A2D2Q1Z9 39496605
    904266 8vu3:b (2.27) BS22 CLA N/A GO:0000287 ... A0A2D2Q1Z9 39496605
    904267 8vu3:b (2.27) BS23 CLA N/A GO:0000287 ... A0A2D2Q1Z9 39496605
    904268 8vu3:b (2.27) BS24 CLA N/A GO:0000287 ... A0A2D2Q1Z9 39496605
    904269 8vu3:b (2.27) BS25 CLA N/A GO:0000287 ... A0A2D2Q1Z9 39496605
    904270 8vu3:b (2.27) BS26 CLA N/A GO:0000287 ... A0A2D2Q1Z9 39496605
    904271 8vu3:b (2.27) BS27 CLA N/A GO:0000287 ... A0A2D2Q1Z9 39496605
    904272 8vu3:b (2.27) BS28 CLA N/A GO:0000287 ... A0A2D2Q1Z9 39496605
    904273 8vu3:b (2.27) BS29 CLA N/A GO:0000287 ... A0A2D2Q1Z9 39496605
    904274 8vu3:b (2.27) BS30 CLA N/A GO:0000287 ... A0A2D2Q1Z9 39496605
    904275 8vu3:b (2.27) BS31 CLA N/A GO:0000287 ... A0A2D2Q1Z9 39496605
    904276 8vu3:b (2.27) BS32 CLA N/A GO:0000287 ... A0A2D2Q1Z9 39496605
    904277 8vu3:b (2.27) BS33 CLA N/A GO:0000287 ... A0A2D2Q1Z9 39496605
    904278 8vu3:b (2.27) BS34 CLA N/A GO:0000287 ... A0A2D2Q1Z9 39496605
    904279 8vu3:b (2.27) BS35 CLA N/A GO:0000287 ... A0A2D2Q1Z9 39496605
    904280 8vu3:b (2.27) BS36 CLA N/A GO:0000287 ... A0A2D2Q1Z9 39496605
    904281 8vu3:b (2.27) BS37 CLA N/A GO:0000287 ... A0A2D2Q1Z9 39496605
    904282 8vu3:b (2.27) BS38 CLA N/A GO:0000287 ... A0A2D2Q1Z9 39496605
    904283 8vu3:b (2.27) BS39 CLA N/A GO:0000287 ... A0A2D2Q1Z9 39496605
    904284 8vu3:b (2.27) BS40 CLA N/A GO:0000287 ... A0A2D2Q1Z9 39496605
    904285 8vu3:b (2.27) BS41 CLA N/A GO:0000287 ... A0A2D2Q1Z9 39496605
    904286 8vu3:b (2.27) BS42 CLA N/A GO:0000287 ... A0A2D2Q1Z9 39496605
    904287 8vu3:b (2.27) BS43 CLA N/A GO:0000287 ... A0A2D2Q1Z9 39496605
    904288 8vu3:b (2.27) BS44 CLA N/A GO:0000287 ... A0A2D2Q1Z9 39496605
    904289 8vu3:b (2.27) BS45 CLA N/A GO:0000287 ... A0A2D2Q1Z9 39496605
    904290 8vu3:b (2.27) BS46 CLA N/A GO:0000287 ... A0A2D2Q1Z9 39496605
    904291 8vu3:b (2.27) BS47 CLA N/A GO:0000287 ... A0A2D2Q1Z9 39496605
    904292 8vu3:b (2.27) BS48 PQN N/A GO:0000287 ... A0A2D2Q1Z9 39496605
    904293 8vu3:b (2.27) BS49 CLA N/A GO:0000287 ... A0A2D2Q1Z9 39496605
    904294 8vu3:c (2.27) BS01 SF4 N/A GO:0009055 ... A0A2D2Q1F9 39496605
    904295 8vu3:c (2.27) BS02 SF4 N/A GO:0009055 ... A0A2D2Q1F9 39496605
    904296 8vu3:f (2.27) BS01 peptide N/A GO:0009522 ... A0A2D2PYV7 39496605
    904297 8vu3:f (2.27) BS02 CLA N/A GO:0009522 ... A0A2D2PYV7 39496605
    904298 8vu3:f (2.27) BS03 CLA N/A GO:0009522 ... A0A2D2PYV7 39496605
    904299 8vu3:f (2.27) BS04 CLA N/A GO:0009522 ... A0A2D2PYV7 39496605
    904300 8vu3:f (2.27) BS05 CLA N/A GO:0009522 ... A0A2D2PYV7 39496605
    904301 8vu3:i (2.27) BS01 CLA N/A GO:0009522 ... A0A2D2Q0W5 39496605
    904302 8vu3:i (2.27) BS02 CLA N/A GO:0009522 ... A0A2D2Q0W5 39496605
    904303 8vu3:i (2.27) BS03 CLA N/A GO:0009522 ... A0A2D2Q0W5 39496605
    904304 8vu3:i (2.27) BS04 CLA N/A GO:0009522 ... A0A2D2Q0W5 39496605
    904305 8vu3:j (2.27) BS01 CLA N/A GO:0009522 ... A0A2D2PZG9 39496605
    904306 8vu3:j (2.27) BS02 CLA N/A GO:0009522 ... A0A2D2PZG9 39496605
    904307 8vu3:j (2.27) BS03 CLA N/A GO:0009522 ... A0A2D2PZG9 39496605
    904308 8vu3:l (2.27) BS01 CLA N/A GO:0009522 ... A0A2D2Q0R7 39496605
    904309 8vu3:l (2.27) BS02 CLA N/A GO:0009522 ... A0A2D2Q0R7 39496605
    904310 8vu3:l (2.27) BS03 CLA N/A GO:0009522 ... A0A2D2Q0R7 39496605
    904311 8vu3:l (2.27) BS04 CLA N/A GO:0009522 ... A0A2D2Q0R7 39496605
    904312 8vu3:l (2.27) BS05 CLA N/A GO:0009522 ... A0A2D2Q0R7 39496605
    904313 8vu3:l (2.27) BS06 CLA N/A GO:0009522 ... A0A2D2Q0R7 39496605
    904314 8vu3:l (2.27) BS07 CA N/A GO:0009522 ... A0A2D2Q0R7 39496605
    904315 8vu3:l (2.27) BS08 CLA N/A GO:0009522 ... A0A2D2Q0R7 39496605
    904316 8vu3:l (2.27) BS09 CLA N/A GO:0009522 ... A0A2D2Q0R7 39496605
    904317 8vu3:l (2.27) BS10 CLA N/A GO:0009522 ... A0A2D2Q0R7 39496605
    904318 8vu3:m (2.27) BS01 CLA N/A GO:0015979 ... A0A3B7MIX8 39496605
    904319 8vu3:m (2.27) BS02 CLA N/A GO:0015979 ... A0A3B7MIX8 39496605
    904320 8vu9:A (1.99) BS01 WB3 N/A GO:0003676 ... P03366 40446037
    904321 8vu9:A (1.99) BS02 MG N/A GO:0003676 ... P03366 40446037
    904322 8vub:A (2.18) BS01 PKX N/A GO:0003676 ... P03366 40446037
    904323 8vub:A (2.18) BS02 MG N/A GO:0003676 ... P03366 40446037
    904324 8vud:A (2.599) BS01 ZN N/A GO:0008270 ... Q8IUX4 41207371
    904325 8vud:B (2.599) BS01 ZN N/A GO:0008270 ... Q8IUX4 41207371
    904326 8vuf:A (2.36) BS01 WB3 N/A GO:0003676 ... P03366 40446037
    904327 8vug:A (2.05) BS01 HEM N/A GO:0004833 ... P48775 39106326
    904328 8vug:A (2.05) BS02 ZIQ N/A GO:0004833 ... P48775 39106326
    904329 8vug:A (2.05) BS03 A1AD1 N/A GO:0004833 ... P48775 39106326
    904330 8vug:B (2.05) BS01 A1AD1 N/A GO:0004833 ... P48775 39106326
    904331 8vug:B (2.05) BS02 HEM N/A GO:0004833 ... P48775 39106326
    904332 8vug:B (2.05) BS03 ZIQ N/A GO:0004833 ... P48775 39106326
    904333 8vug:B (2.05) BS04 A1AD1 N/A GO:0004833 ... P48775 39106326
    904334 8vug:C (2.05) BS01 HEM N/A GO:0004833 ... P48775 39106326
    904335 8vug:C (2.05) BS02 ZIQ N/A GO:0004833 ... P48775 39106326
    904336 8vug:C (2.05) BS03 A1AD1 N/A GO:0004833 ... P48775 39106326
    904337 8vug:C (2.05) BS04 A1AD1 N/A GO:0004833 ... P48775 39106326
    904338 8vug:D (2.05) BS01 HEM N/A GO:0004833 ... P48775 39106326
    904339 8vug:D (2.05) BS02 ZIQ N/A GO:0004833 ... P48775 39106326
    904340 8vug:D (2.05) BS03 A1AD1 N/A GO:0004833 ... P48775 39106326
    904341 8vuk:A (1.3) BS01 MN N/A N/A Q2YK41 40191301
    904342 8vum:A (2.15) BS01 MG N/A GO:0003676 ... P03366 40446037
    904343 8vum:A (2.15) BS02 PKX N/A GO:0003676 ... P03366 40446037
    904344 8vuo:A (2.39) BS01 rna N/A N/A P0DTD1 40220753
    904345 8vuo:A (2.39) BS02 SAH N/A N/A P0DTD1 40220753
    904346 8vuo:A (2.39) BS03 M7G N/A N/A P0DTD1 40220753
    904347 8vuo:B (2.39) BS01 ZN N/A GO:0003723 ... P0DTD1 40220753
    904348 8vuo:B (2.39) BS02 ZN N/A GO:0003723 ... P0DTD1 40220753
    904349 8vuo:C (2.39) BS01 rna N/A N/A P0DTD1 40220753
    904350 8vuo:C (2.39) BS02 SAH N/A N/A P0DTD1 40220753
    904351 8vuo:C (2.39) BS03 M7G N/A N/A P0DTD1 40220753
    904352 8vuo:D (2.39) BS01 ZN N/A GO:0003723 ... P0DTD1 40220753
    904353 8vuo:D (2.39) BS02 ZN N/A GO:0003723 ... P0DTD1 40220753
    904354 8vup:A (3.4) BS01 rna N/A GO:0003723 ... A0A5P0JAY3 N/A
    904355 8vup:B (3.4) BS01 rna N/A GO:0000027 ... P60422 N/A
    904356 8vup:C (3.4) BS01 rna N/A GO:0000027 ... P60438 N/A
    904357 8vup:D (3.4) BS01 rna N/A GO:0003735 ... A1AGK6 N/A
    904358 8vup:E (3.4) BS01 rna N/A GO:0000049 ... A0A4P8BX24 N/A
    904359 8vup:E (3.4) BS02 rna N/A GO:0000049 ... A0A4P8BX24 N/A
    904360 8vup:F (3.4) BS01 rna N/A GO:0002181 ... C3SR17 N/A
    904361 8vup:G (3.4) BS01 rna N/A GO:0003735 ... C3SFP2 N/A
    904362 8vup:J (3.4) BS01 rna N/A GO:0003735 ... N/A N/A
    904363 8vup:K (3.4) BS01 rna N/A GO:0003735 ... S1NW45 N/A
    904364 8vup:K (3.4) BS02 rna N/A GO:0003735 ... S1NW45 N/A
    904365 8vup:L (3.4) BS01 rna N/A GO:0003735 ... A0A037Y8L6 N/A
    904366 8vup:M (3.4) BS01 rna N/A GO:0000027 ... P0ADY7 N/A
    904367 8vup:M (3.4) BS02 rna N/A GO:0000027 ... P0ADY7 N/A
    904368 8vup:N (3.4) BS01 rna N/A GO:0003735 ... A0A2T1LEK9 N/A
    904369 8vup:O (3.4) BS01 rna N/A GO:0003735 ... N/A N/A
    904370 8vup:O (3.4) BS02 rna N/A GO:0003735 ... N/A N/A
    904371 8vup:P (3.4) BS01 rna N/A GO:0003735 ... S1PSA3 N/A
    904372 8vup:P (3.4) BS02 rna N/A GO:0003735 ... S1PSA3 N/A
    904373 8vup:Q (3.4) BS01 rna N/A GO:0000027 ... C3T7Q7 N/A
    904374 8vup:R (3.4) BS01 rna N/A GO:0003723 ... C3SSG2 N/A
    904375 8vup:S (3.4) BS01 rna N/A GO:0002181 ... P61175 N/A
    904376 8vup:T (3.4) BS01 rna N/A GO:0003735 ... C3SQV2 N/A
    904377 8vup:U (3.4) BS01 rna N/A GO:0003723 ... N/A N/A
    904378 8vup:V (3.4) BS01 rna N/A GO:0003735 ... N/A N/A
    904379 8vup:V (3.4) BS02 rna N/A GO:0003735 ... N/A N/A
    904380 8vup:W (3.4) BS01 rna N/A GO:0003735 ... A0A1X3JCC7 N/A
    904381 8vup:W (3.4) BS02 rna N/A GO:0003735 ... A0A1X3JCC7 N/A
    904382 8vup:X (3.4) BS01 rna N/A GO:0003735 ... A0A0E2KZD0 N/A
    904383 8vup:Y (3.4) BS01 rna N/A GO:0003735 ... N/A N/A
    904384 8vup:Z (3.4) BS01 rna N/A GO:0000027 ... P0AG51 N/A
    904385 8vup:Z (3.4) BS02 rna N/A GO:0000027 ... P0AG51 N/A
    904386 8vup:b (3.4) BS01 rna N/A GO:0003735 ... A0A828UBL8 N/A
    904387 8vup:c (3.4) BS01 rna N/A GO:0003735 ... N/A N/A
    904388 8vup:d (3.4) BS01 rna N/A GO:0003735 ... B7MGC4 N/A
    904389 8vup:e (3.4) BS01 rna N/A GO:0003735 ... N/A N/A
    904390 8vup:f (3.4) BS01 rna N/A GO:0003735 ... A0A0E2L017 N/A
    904391 8vup:h (3.4) BS01 rna N/A GO:0003676 ... P0A7V3 N/A
    904392 8vup:i (3.4) BS01 rna N/A GO:0003723 ... C3SR62 N/A
    904393 8vup:j (3.4) BS01 rna N/A GO:0003723 ... N/A N/A
    904394 8vup:k (3.4) BS01 rna N/A GO:0003735 ... P02358 N/A
    904395 8vup:l (3.4) BS01 rna N/A GO:0003723 ... P02359 N/A
    904396 8vup:m (3.4) BS01 rna N/A GO:0003735 ... A0A828U358 N/A
    904397 8vup:n (3.4) BS01 rna N/A GO:0000028 ... C3SRY2 N/A
    904398 8vup:n (3.4) BS02 rna N/A GO:0000028 ... C3SRY2 N/A
    904399 8vup:o (3.4) BS01 rna N/A GO:0000049 ... A0A0H3EQD3 N/A
    904400 8vup:p (3.4) BS01 rna N/A GO:0000028 ... C3SR57 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).