SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    905601 8x7p:A (2.7) BS01 V79 N/A GO:0000122 ... P37840 39172784
    905602 8x7p:B (2.7) BS01 V79 N/A GO:0000122 ... P37840 39172784
    905603 8x7p:C (2.7) BS01 V79 N/A GO:0000122 ... P37840 39172784
    905604 8x7p:D (2.7) BS01 V79 N/A GO:0000122 ... P37840 39172784
    905605 8x7p:E (2.7) BS01 V79 N/A GO:0000122 ... P37840 39172784
    905606 8x7q:A (2.7) BS01 3LS N/A GO:0000122 ... P37840 39172784
    905607 8x7q:B (2.7) BS01 3LS N/A GO:0000122 ... P37840 39172784
    905608 8x7q:C (2.7) BS01 3LS N/A GO:0000122 ... P37840 39172784
    905609 8x7q:E (2.7) BS01 3LS N/A GO:0000122 ... P37840 39172784
    905610 8x7q:F (2.7) BS01 3LS N/A GO:0000122 ... P37840 39172784
    905611 8x7q:G (2.7) BS01 3LS N/A GO:0000122 ... P37840 39172784
    905612 8x7q:H (2.7) BS01 3LS N/A GO:0000122 ... P37840 39172784
    905613 8x7q:I (2.7) BS01 3LS N/A GO:0000122 ... P37840 39172784
    905614 8x7q:J (2.7) BS01 3LS N/A GO:0000122 ... P37840 39172784
    905615 8x7r:A (3.0) BS01 Y9W N/A GO:0000122 ... P37840 39172784
    905616 8x7r:A (3.0) BS02 Y9W N/A GO:0000122 ... P37840 39172784
    905617 8x7r:B (3.0) BS01 Y9W N/A GO:0000122 ... P37840 39172784
    905618 8x7r:B (3.0) BS02 Y9W N/A GO:0000122 ... P37840 39172784
    905619 8x7r:C (3.0) BS01 Y9W N/A GO:0000122 ... P37840 39172784
    905620 8x7r:C (3.0) BS02 Y9W N/A GO:0000122 ... P37840 39172784
    905621 8x7r:D (3.0) BS01 Y9W N/A GO:0000122 ... P37840 39172784
    905622 8x7r:D (3.0) BS02 Y9W N/A GO:0000122 ... P37840 39172784
    905623 8x7r:D (3.0) BS03 Y9W N/A GO:0000122 ... P37840 39172784
    905624 8x7r:E (3.0) BS01 Y9W N/A GO:0000122 ... P37840 39172784
    905625 8x7r:E (3.0) BS02 Y9W N/A GO:0000122 ... P37840 39172784
    905626 8x7r:F (3.0) BS01 Y9W N/A GO:0000122 ... P37840 39172784
    905627 8x7r:F (3.0) BS02 Y9W N/A GO:0000122 ... P37840 39172784
    905628 8x7r:G (3.0) BS01 Y9W N/A GO:0000122 ... P37840 39172784
    905629 8x7r:G (3.0) BS02 Y9W N/A GO:0000122 ... P37840 39172784
    905630 8x7r:G (3.0) BS03 Y9W N/A GO:0000122 ... P37840 39172784
    905631 8x7r:H (3.0) BS01 Y9W N/A GO:0000122 ... P37840 39172784
    905632 8x7r:I (3.0) BS01 Y9W N/A GO:0000122 ... P37840 39172784
    905633 8x7r:J (3.0) BS01 Y9W N/A GO:0000122 ... P37840 39172784
    905634 8x7r:J (3.0) BS02 Y9W N/A GO:0000122 ... P37840 39172784
    905635 8x7r:J (3.0) BS03 Y9W N/A GO:0000122 ... P37840 39172784
    905636 8x7u:A (3.57) BS01 ATP 3.6.4.12 GO:0003677 ... Q5JIT1 39604363
    905637 8x7u:B (3.57) BS01 ATP 3.6.4.12 GO:0003677 ... Q5JIT1 39604363
    905638 8x7u:C (3.57) BS01 ATP 3.6.4.12 GO:0003677 ... Q5JIT1 39604363
    905639 8x7u:C (3.57) BS02 ATP 3.6.4.12 GO:0003677 ... Q5JIT1 39604363
    905640 8x7u:D (3.57) BS01 ATP 3.6.4.12 GO:0003677 ... Q5JIT1 39604363
    905641 8x7u:D (3.57) BS02 ATP 3.6.4.12 GO:0003677 ... Q5JIT1 39604363
    905642 8x7u:E (3.57) BS01 ATP 3.6.4.12 GO:0003677 ... Q5JIT1 39604363
    905643 8x7u:E (3.57) BS02 ATP 3.6.4.12 GO:0003677 ... Q5JIT1 39604363
    905644 8x7u:F (3.57) BS01 ATP 3.6.4.12 GO:0003677 ... Q5JIT1 39604363
    905645 8x83:A (2.8) BS01 FRU ? GO:0001582 ... Q9V4K2 38305684
    905646 8x83:B (2.8) BS01 FRU ? GO:0001582 ... Q9V4K2 38305684
    905647 8x83:C (2.8) BS01 FRU ? GO:0001582 ... Q9V4K2 38305684
    905648 8x83:D (2.8) BS01 FRU ? GO:0001582 ... Q9V4K2 38305684
    905649 8x84:A (3.1) BS01 FRU ? GO:0001582 ... Q9V4K2 38305684
    905650 8x84:B (3.1) BS01 FRU ? GO:0001582 ... Q9V4K2 38305684
    905651 8x84:C (3.1) BS01 FRU ? GO:0001582 ... Q9V4K2 38305684
    905652 8x84:D (3.1) BS01 FRU ? GO:0001582 ... Q9V4K2 38305684
    905653 8x8a:A (1.53) BS01 peptide N/A GO:0000045 ... Q9H0R8 39236246
    905654 8x8g:A (2.27) BS01 BMA N/A N/A N/A 38938812
    905655 8x8g:A (2.27) BS02 MAN N/A N/A N/A 38938812
    905656 8x8g:A (2.27) BS03 MAN N/A N/A N/A 38938812
    905657 8x8g:A (2.27) BS04 SIA N/A N/A N/A 38938812
    905658 8x8g:A (2.27) BS05 NGO N/A N/A N/A 38938812
    905659 8x8g:A (2.27) BS06 CA N/A N/A N/A 38938812
    905660 8x8i:A (2.54) BS01 SAM N/A GO:0008168 ... A0A1E3M3A7 N/A
    905661 8x8i:B (2.54) BS01 SAM N/A GO:0008168 ... A0A1E3M3A7 N/A
    905662 8x8i:C (2.54) BS01 SAM N/A GO:0008168 ... A0A1E3M3A7 N/A
    905663 8x8i:D (2.54) BS01 SAM N/A GO:0008168 ... A0A1E3M3A7 N/A
    905664 8x8j:A (1.72) BS01 SFG N/A GO:0008168 ... A0A1E3M3A7 N/A
    905665 8x8j:B (1.72) BS01 SFG N/A GO:0008168 ... A0A1E3M3A7 N/A
    905666 8x8k:A (2.1) BS01 GLC N/A GO:0030246 ... O95210 39236246
    905667 8x8k:A (2.1) BS02 GLC N/A GO:0030246 ... O95210 39236246
    905668 8x8k:A (2.1) BS03 GLC N/A GO:0030246 ... O95210 39236246
    905669 8x8k:A (2.1) BS04 GLC N/A GO:0030246 ... O95210 39236246
    905670 8x8k:B (2.1) BS01 GLC N/A GO:0030246 ... O95210 39236246
    905671 8x8k:B (2.1) BS02 GLC N/A GO:0030246 ... O95210 39236246
    905672 8x8k:C (2.1) BS01 GLC N/A GO:0030246 ... O95210 39236246
    905673 8x8k:C (2.1) BS02 GLC N/A GO:0030246 ... O95210 39236246
    905674 8x8k:C (2.1) BS03 GLC N/A GO:0030246 ... O95210 39236246
    905675 8x8k:C (2.1) BS04 GLC N/A GO:0030246 ... O95210 39236246
    905676 8x8k:D (2.1) BS01 GLC N/A GO:0030246 ... O95210 39236246
    905677 8x8k:D (2.1) BS02 GLC N/A GO:0030246 ... O95210 39236246
    905678 8x8k:D (2.1) BS03 GLC N/A GO:0030246 ... O95210 39236246
    905679 8x8l:R (2.7) BS01 peptide ? GO:0004930 ... P35346 38885377
    905680 8x8n:R (2.9) BS01 peptide ? GO:0004930 ... P35346 38885377
    905681 8x8q:F (3.14) BS01 ZN ? GO:0006508 ... R9YK28 38755176
    905682 8x8r:A (2.84) BS01 SIA N/A N/A A0A172QBP4 N/A
    905683 8x8r:B (2.84) BS01 SIA N/A N/A A0A172QBP4 N/A
    905684 8x8r:C (2.84) BS01 SIA N/A N/A A0A172QBP4 N/A
    905685 8x8x:A (2.6) BS01 YDW N/A N/A O75116 N/A
    905686 8x8x:B (2.6) BS01 YDW N/A N/A O75116 N/A
    905687 8x8y:A (3.2) BS01 YEA N/A N/A O75116 N/A
    905688 8x8y:B (3.2) BS01 YEA N/A N/A O75116 N/A
    905689 8x8z:A (2.7) BS01 YEI N/A N/A O75116 N/A
    905690 8x8z:B (2.7) BS01 YEI N/A N/A O75116 N/A
    905691 8x90:A (2.95) BS01 PS1 ? GO:0001540 ... O00555 38443561
    905692 8x90:A (2.95) BS02 CLR ? GO:0001540 ... O00555 38443561
    905693 8x90:A (2.95) BS03 PT5 ? GO:0001540 ... O00555 38443561
    905694 8x90:A (2.95) BS04 CA ? GO:0001540 ... O00555 38443561
    905695 8x90:A (2.95) BS05 Y01 ? GO:0001540 ... O00555 38443561
    905696 8x90:A (2.95) BS06 CLR ? GO:0001540 ... O00555 38443561
    905697 8x90:A (2.95) BS07 Y01 ? GO:0001540 ... O00555 38443561
    905698 8x90:A (2.95) BS08 Y01 ? GO:0001540 ... O00555 38443561
    905699 8x90:A (2.95) BS09 CLR ? GO:0001540 ... O00555 38443561
    905700 8x90:A (2.95) BS10 CLR ? GO:0001540 ... O00555 38443561
    905701 8x90:B (2.95) BS01 CA ? N/A P54289 38443561
    905702 8x91:A (3.11) BS01 peptide ? GO:0001540 ... O00555 38443561
    905703 8x91:A (3.11) BS02 CLR ? GO:0001540 ... O00555 38443561
    905704 8x91:A (3.11) BS03 PT5 ? GO:0001540 ... O00555 38443561
    905705 8x91:A (3.11) BS04 CA ? GO:0001540 ... O00555 38443561
    905706 8x91:A (3.11) BS05 Y01 ? GO:0001540 ... O00555 38443561
    905707 8x91:A (3.11) BS06 CLR ? GO:0001540 ... O00555 38443561
    905708 8x91:A (3.11) BS07 Y01 ? GO:0001540 ... O00555 38443561
    905709 8x91:A (3.11) BS08 Y01 ? GO:0001540 ... O00555 38443561
    905710 8x91:A (3.11) BS09 CLR ? GO:0001540 ... O00555 38443561
    905711 8x91:A (3.11) BS10 CLR ? GO:0001540 ... O00555 38443561
    905712 8x91:B (3.11) BS01 CA ? N/A P54289 38443561
    905713 8x92:A (2.2) BS01 YEW N/A N/A O75116 N/A
    905714 8x92:B (2.2) BS01 YEW N/A N/A O75116 N/A
    905715 8x93:A (2.92) BS01 CLR ? GO:0001540 ... O00555 38443561
    905716 8x93:A (2.92) BS02 PT5 ? GO:0001540 ... O00555 38443561
    905717 8x93:A (2.92) BS03 Y01 ? GO:0001540 ... O00555 38443561
    905718 8x93:A (2.92) BS04 CLR ? GO:0001540 ... O00555 38443561
    905719 8x93:A (2.92) BS05 CLR ? GO:0001540 ... O00555 38443561
    905720 8x93:A (2.92) BS06 Y01 ? GO:0001540 ... O00555 38443561
    905721 8x93:A (2.92) BS07 Y01 ? GO:0001540 ... O00555 38443561
    905722 8x93:A (2.92) BS08 CLR ? GO:0001540 ... O00555 38443561
    905723 8x93:A (2.92) BS09 CLR ? GO:0001540 ... O00555 38443561
    905724 8x93:A (2.92) BS10 CA ? GO:0001540 ... O00555 38443561
    905725 8x93:B (2.92) BS01 CA ? N/A P54289 38443561
    905726 8x94:A (2.55) BS01 EZI N/A GO:0000122 ... Q8NER1 39107321
    905727 8x94:B (2.55) BS01 EZI N/A GO:0000122 ... Q8NER1 39107321
    905728 8x94:C (2.55) BS01 EZI N/A GO:0000122 ... Q8NER1 39107321
    905729 8x94:C (2.55) BS02 CLR N/A GO:0000122 ... Q8NER1 39107321
    905730 8x94:D (2.55) BS01 EZI N/A GO:0000122 ... Q8NER1 39107321
    905731 8x9d:A (2.11) BS01 SF4 1.2.7.4 GO:0003824 ... Q9F8A8 38548760
    905732 8x9d:A (2.11) BS02 FES 1.2.7.4 GO:0003824 ... Q9F8A8 38548760
    905733 8x9d:A (2.11) BS03 XCC 1.2.7.4 GO:0003824 ... Q9F8A8 38548760
    905734 8x9d:A (2.11) BS04 FE 1.2.7.4 GO:0003824 ... Q9F8A8 38548760
    905735 8x9e:A (2.5) BS01 SF4 1.2.7.4 GO:0003824 ... Q9F8A8 38548760
    905736 8x9e:A (2.5) BS02 FES 1.2.7.4 GO:0003824 ... Q9F8A8 38548760
    905737 8x9e:A (2.5) BS03 XCC 1.2.7.4 GO:0003824 ... Q9F8A8 38548760
    905738 8x9e:A (2.5) BS04 FE 1.2.7.4 GO:0003824 ... Q9F8A8 38548760
    905739 8x9f:A (2.48) BS01 SF4 1.2.7.4 GO:0003824 ... Q9F8A8 38548760
    905740 8x9f:A (2.48) BS02 FES 1.2.7.4 GO:0003824 ... Q9F8A8 38548760
    905741 8x9f:A (2.48) BS03 XCC 1.2.7.4 GO:0003824 ... Q9F8A8 38548760
    905742 8x9f:A (2.48) BS04 S8I 1.2.7.4 GO:0003824 ... Q9F8A8 38548760
    905743 8x9g:A (3.11) BS01 SF4 1.2.7.4 GO:0003824 ... Q9F8A8 38548760
    905744 8x9g:A (3.11) BS02 FES 1.2.7.4 GO:0003824 ... Q9F8A8 38548760
    905745 8x9g:A (3.11) BS03 XCC 1.2.7.4 GO:0003824 ... Q9F8A8 38548760
    905746 8x9g:A (3.11) BS04 S7L 1.2.7.4 GO:0003824 ... Q9F8A8 38548760
    905747 8x9h:A (2.2) BS01 SF4 1.2.7.4 GO:0003824 ... Q9F8A8 38548760
    905748 8x9h:A (2.2) BS02 FES 1.2.7.4 GO:0003824 ... Q9F8A8 38548760
    905749 8x9h:A (2.2) BS03 XCC 1.2.7.4 GO:0003824 ... Q9F8A8 38548760
    905750 8x9h:A (2.2) BS04 FE 1.2.7.4 GO:0003824 ... Q9F8A8 38548760
    905751 8x9t:R (2.75) BS01 YNH N/A N/A Q6QNK2 39884271
    905752 8x9u:R (2.88) BS01 A1LU1 N/A N/A Q6QNK2 39884271
    905753 8x9v:C (2.36) BS01 FMN N/A GO:0003954 ... A0A0K0GM91 N/A
    905754 8x9v:D (2.36) BS01 FES N/A N/A A0A0K0GMP8 N/A
    905755 8x9v:F (2.36) BS01 FMN N/A GO:0003954 ... A0A0K0GM91 N/A
    905756 8x9v:O (2.36) BS01 FES N/A N/A A0A0K0GMP8 N/A
    905757 8xa8:D (3.19) BS01 ZN N/A GO:0000287 ... P37871 N/A
    905758 8xa8:D (3.19) BS02 ZN N/A GO:0000287 ... P37871 N/A
    905759 8xa9:A (2.32) BS01 dna 3.1.-.- N/A Q9BQP7 38471810
    905760 8xa9:A (2.32) BS02 dna 3.1.-.- N/A Q9BQP7 38471810
    905761 8xa9:A (2.32) BS03 CA 3.1.-.- N/A Q9BQP7 38471810
    905762 8xa9:A (2.32) BS04 CA 3.1.-.- N/A Q9BQP7 38471810
    905763 8xa9:B (2.32) BS01 dna 3.1.-.- N/A Q9BQP7 38471810
    905764 8xa9:B (2.32) BS02 dna 3.1.-.- N/A Q9BQP7 38471810
    905765 8xa9:B (2.32) BS03 dna 3.1.-.- N/A Q9BQP7 38471810
    905766 8xa9:B (2.32) BS04 CA 3.1.-.- N/A Q9BQP7 38471810
    905767 8xa9:B (2.32) BS05 CA 3.1.-.- N/A Q9BQP7 38471810
    905768 8xag:A (1.75) BS01 peptide N/A N/A Q946J8 N/A
    905769 8xag:A (1.75) BS02 peptide N/A N/A Q946J8 N/A
    905770 8xag:B (1.75) BS01 peptide N/A N/A Q946J8 N/A
    905771 8xag:B (1.75) BS02 peptide N/A N/A Q946J8 N/A
    905772 8xak:A (3.5) BS01 dna N/A GO:0000723 ... P07271 39030241
    905773 8xak:A (3.5) BS02 ADP N/A GO:0000723 ... P07271 39030241
    905774 8xak:A (3.5) BS03 ALF N/A GO:0000723 ... P07271 39030241
    905775 8xak:C (3.5) BS01 dna N/A GO:0000723 ... P07271 39030241
    905776 8xak:C (3.5) BS02 ADP N/A GO:0000723 ... P07271 39030241
    905777 8xak:C (3.5) BS03 ALF N/A GO:0000723 ... P07271 39030241
    905778 8xam:A (1.3) BS01 SAM 2.5.1.6 GO:0004478 ... P31153 38342078
    905779 8xam:A (1.3) BS02 XRH 2.5.1.6 GO:0004478 ... P31153 38342078
    905780 8xam:A (1.3) BS03 SAM 2.5.1.6 GO:0004478 ... P31153 38342078
    905781 8xam:B (1.3) BS01 SAM 2.5.1.6 GO:0004478 ... P31153 38342078
    905782 8xam:B (1.3) BS02 XRH 2.5.1.6 GO:0004478 ... P31153 38342078
    905783 8xam:B (1.3) BS03 SAM 2.5.1.6 GO:0004478 ... P31153 38342078
    905784 8xar:A (1.19) BS01 YMW N/A GO:0004478 ... P31153 38818879
    905785 8xar:A (1.19) BS02 SAM N/A GO:0004478 ... P31153 38818879
    905786 8xas:A (2.346) BS01 dna ? GO:0003677 ... Q940D0 38198526
    905787 8xas:A (2.346) BS02 dna ? GO:0003677 ... Q940D0 38198526
    905788 8xas:B (2.346) BS01 dna ? GO:0003677 ... Q940D0 38198526
    905789 8xas:B (2.346) BS02 dna ? GO:0003677 ... Q940D0 38198526
    905790 8xas:C (2.346) BS01 dna ? GO:0003677 ... Q940D0 38198526
    905791 8xas:C (2.346) BS02 dna ? GO:0003677 ... Q940D0 38198526
    905792 8xas:D (2.346) BS01 dna ? GO:0003677 ... Q940D0 38198526
    905793 8xas:D (2.346) BS02 dna ? GO:0003677 ... Q940D0 38198526
    905794 8xas:E (2.346) BS01 dna ? GO:0003677 ... Q940D0 38198526
    905795 8xas:E (2.346) BS02 dna ? GO:0003677 ... Q940D0 38198526
    905796 8xas:F (2.346) BS01 dna ? GO:0003677 ... Q940D0 38198526
    905797 8xas:F (2.346) BS02 dna ? GO:0003677 ... Q940D0 38198526
    905798 8xaw:A (2.73) BS01 ADP N/A N/A N/A 38834762
    905799 8xaw:A (2.73) BS02 MG N/A N/A N/A 38834762
    905800 8xaw:B (2.73) BS01 dna N/A N/A N/A 38834762

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).