SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    906001 8w0f:F (2.8) BS02 ZN N/A GO:0000727 ... P33993 39604729
    906002 8w0f:F (2.8) BS03 MG N/A GO:0000727 ... P33993 39604729
    906003 8w0f:F (2.8) BS04 ADP N/A GO:0000727 ... P33993 39604729
    906004 8w0g:2 (3.8) BS01 ZN N/A GO:0000228 ... P49736 39604729
    906005 8w0g:2 (3.8) BS02 MG N/A GO:0000228 ... P49736 39604729
    906006 8w0g:2 (3.8) BS03 ATP N/A GO:0000228 ... P49736 39604729
    906007 8w0g:3 (3.8) BS01 ADP N/A GO:0000727 ... P25205 39604729
    906008 8w0g:3 (3.8) BS02 ATP N/A GO:0000727 ... P25205 39604729
    906009 8w0g:4 (3.8) BS01 ZN N/A GO:0000727 ... P33991 39604729
    906010 8w0g:4 (3.8) BS02 ATP N/A GO:0000727 ... P33991 39604729
    906011 8w0g:4 (3.8) BS03 ATP N/A GO:0000727 ... P33991 39604729
    906012 8w0g:5 (3.8) BS01 ADP N/A GO:0000727 ... P33992 39604729
    906013 8w0g:5 (3.8) BS02 ZN N/A GO:0000727 ... P33992 39604729
    906014 8w0g:6 (3.8) BS01 ATP N/A GO:0000727 ... Q14566 39604729
    906015 8w0g:6 (3.8) BS02 ZN N/A GO:0000727 ... Q14566 39604729
    906016 8w0g:6 (3.8) BS03 ATP N/A GO:0000727 ... Q14566 39604729
    906017 8w0g:7 (3.8) BS01 ATP N/A GO:0000727 ... P33993 39604729
    906018 8w0g:7 (3.8) BS02 ZN N/A GO:0000727 ... P33993 39604729
    906019 8w0g:7 (3.8) BS03 ATP N/A GO:0000727 ... P33993 39604729
    906020 8w0g:A (3.8) BS01 ZN N/A GO:0000228 ... P49736 39604729
    906021 8w0g:A (3.8) BS02 ATP N/A GO:0000228 ... P49736 39604729
    906022 8w0g:B (3.8) BS01 ADP N/A GO:0000727 ... P25205 39604729
    906023 8w0g:B (3.8) BS02 ATP N/A GO:0000727 ... P25205 39604729
    906024 8w0g:C (3.8) BS01 ZN N/A GO:0000727 ... P33991 39604729
    906025 8w0g:C (3.8) BS02 ATP N/A GO:0000727 ... P33991 39604729
    906026 8w0g:C (3.8) BS03 ATP N/A GO:0000727 ... P33991 39604729
    906027 8w0g:D (3.8) BS01 ADP N/A GO:0000727 ... P33992 39604729
    906028 8w0g:D (3.8) BS02 ZN N/A GO:0000727 ... P33992 39604729
    906029 8w0g:E (3.8) BS01 ATP N/A GO:0000727 ... Q14566 39604729
    906030 8w0g:E (3.8) BS02 ZN N/A GO:0000727 ... Q14566 39604729
    906031 8w0g:E (3.8) BS03 ATP N/A GO:0000727 ... Q14566 39604729
    906032 8w0g:F (3.8) BS01 ATP N/A GO:0000727 ... P33993 39604729
    906033 8w0g:F (3.8) BS02 ZN N/A GO:0000727 ... P33993 39604729
    906034 8w0g:F (3.8) BS03 MG N/A GO:0000727 ... P33993 39604729
    906035 8w0g:F (3.8) BS04 ATP N/A GO:0000727 ... P33993 39604729
    906036 8w0h:A (2.95) BS01 YHQ 6.2.1.1 GO:0003987 ... Q8NJN3 N/A
    906037 8w0h:B (2.95) BS01 YHQ 6.2.1.1 GO:0003987 ... Q8NJN3 N/A
    906038 8w0h:C (2.95) BS01 YHQ 6.2.1.1 GO:0003987 ... Q8NJN3 N/A
    906039 8w0i:2 (3.5) BS01 ZN N/A GO:0000228 ... P49736 39604729
    906040 8w0i:2 (3.5) BS02 MG N/A GO:0000228 ... P49736 39604729
    906041 8w0i:2 (3.5) BS03 ATP N/A GO:0000228 ... P49736 39604729
    906042 8w0i:3 (3.5) BS01 ADP N/A GO:0000727 ... P25205 39604729
    906043 8w0i:3 (3.5) BS02 ATP N/A GO:0000727 ... P25205 39604729
    906044 8w0i:4 (3.5) BS01 ZN N/A GO:0000727 ... P33991 39604729
    906045 8w0i:4 (3.5) BS02 ATP N/A GO:0000727 ... P33991 39604729
    906046 8w0i:4 (3.5) BS03 ATP N/A GO:0000727 ... P33991 39604729
    906047 8w0i:5 (3.5) BS01 ADP N/A GO:0000727 ... P33992 39604729
    906048 8w0i:5 (3.5) BS02 ZN N/A GO:0000727 ... P33992 39604729
    906049 8w0i:6 (3.5) BS01 ATP N/A GO:0000727 ... Q14566 39604729
    906050 8w0i:6 (3.5) BS02 ZN N/A GO:0000727 ... Q14566 39604729
    906051 8w0i:6 (3.5) BS03 ATP N/A GO:0000727 ... Q14566 39604729
    906052 8w0i:7 (3.5) BS01 ATP N/A GO:0000727 ... P33993 39604729
    906053 8w0i:7 (3.5) BS02 ZN N/A GO:0000727 ... P33993 39604729
    906054 8w0i:7 (3.5) BS03 ATP N/A GO:0000727 ... P33993 39604729
    906055 8w0j:A (2.85) BS01 YHT 6.2.1.1 GO:0003987 ... Q8NJN3 N/A
    906056 8w0j:B (2.85) BS01 YHT 6.2.1.1 GO:0003987 ... Q8NJN3 N/A
    906057 8w0j:C (2.85) BS01 YHT 6.2.1.1 GO:0003987 ... Q8NJN3 N/A
    906058 8w0k:A (1.42) BS01 FAD N/A GO:0003842 ... F7X6I3 39133178
    906059 8w0k:A (1.42) BS02 GHO N/A GO:0003842 ... F7X6I3 39133178
    906060 8w0k:B (1.42) BS01 FAD N/A GO:0003842 ... F7X6I3 39133178
    906061 8w0k:B (1.42) BS02 GHO N/A GO:0003842 ... F7X6I3 39133178
    906062 8w0l:A (2.75) BS01 YHT 6.2.1.1 GO:0003987 ... Q8NJN3 N/A
    906063 8w0l:A (2.75) BS02 COA 6.2.1.1 GO:0003987 ... Q8NJN3 N/A
    906064 8w0l:B (2.75) BS01 YHT 6.2.1.1 GO:0003987 ... Q8NJN3 N/A
    906065 8w0l:C (2.75) BS01 YHT 6.2.1.1 GO:0003987 ... Q8NJN3 N/A
    906066 8w0l:C (2.75) BS02 COA 6.2.1.1 GO:0003987 ... Q8NJN3 N/A
    906067 8w0m:A (3.1) BS01 7RM 6.2.1.1 GO:0003987 ... Q8NJN3 N/A
    906068 8w0m:B (3.1) BS01 7RM 6.2.1.1 GO:0003987 ... Q8NJN3 N/A
    906069 8w0m:C (3.1) BS01 7RM 6.2.1.1 GO:0003987 ... Q8NJN3 N/A
    906070 8w0n:A (1.37) BS01 NAD N/A GO:0006629 ... P12310 N/A
    906071 8w0n:B (1.37) BS01 NAD N/A GO:0006629 ... P12310 N/A
    906072 8w0o:A (1.66) BS01 NAD N/A GO:0006629 ... P12310 N/A
    906073 8w0o:B (1.66) BS01 NAD N/A GO:0006629 ... P12310 N/A
    906074 8w0o:C (1.66) BS01 NAD N/A GO:0006629 ... P12310 N/A
    906075 8w0o:D (1.66) BS01 NAD N/A GO:0006629 ... P12310 N/A
    906076 8w0o:E (1.66) BS01 NAD N/A GO:0006629 ... P12310 N/A
    906077 8w0o:F (1.66) BS01 NAD N/A GO:0006629 ... P12310 N/A
    906078 8w0o:G (1.66) BS01 NAD N/A GO:0006629 ... P12310 N/A
    906079 8w0o:H (1.66) BS01 NAD N/A GO:0006629 ... P12310 N/A
    906080 8w0p:A (3.26) BS01 SAM N/A GO:0003676 ... N/A N/A
    906081 8w0p:B (3.26) BS01 SAM N/A GO:0003676 ... N/A N/A
    906082 8w0r:A (2.8) BS01 A1AEU N/A GO:0000247 ... Q15125 38470227
    906083 8w0r:B (2.8) BS01 A1AEU N/A GO:0000247 ... Q15125 38470227
    906084 8w0s:A (2.8) BS01 A1AEV N/A GO:0000247 ... Q15125 38470227
    906085 8w0s:B (2.8) BS01 A1AEV N/A GO:0000247 ... Q15125 38470227
    906086 8w0t:A (2.5) BS01 FAD N/A GO:0001659 ... P28330 38839792
    906087 8w0t:A (2.5) BS02 FAD N/A GO:0001659 ... P28330 38839792
    906088 8w0t:B (2.5) BS01 FAD N/A GO:0001659 ... P28330 38839792
    906089 8w0t:B (2.5) BS02 FAD N/A GO:0001659 ... P28330 38839792
    906090 8w0t:C (2.5) BS01 FAD N/A GO:0001659 ... P28330 38839792
    906091 8w0t:C (2.5) BS02 FAD N/A GO:0001659 ... P28330 38839792
    906092 8w0t:D (2.5) BS01 FAD N/A GO:0001659 ... P28330 38839792
    906093 8w0t:D (2.5) BS02 FAD N/A GO:0001659 ... P28330 38839792
    906094 8w0u:A (2.8) BS01 FAD N/A GO:0001659 ... P28330 38839792
    906095 8w0u:A (2.8) BS02 CAA N/A GO:0001659 ... P28330 38839792
    906096 8w0u:A (2.8) BS03 FAD N/A GO:0001659 ... P28330 38839792
    906097 8w0u:B (2.8) BS01 FAD N/A GO:0001659 ... P28330 38839792
    906098 8w0u:B (2.8) BS02 FAD N/A GO:0001659 ... P28330 38839792
    906099 8w0u:B (2.8) BS03 CAA N/A GO:0001659 ... P28330 38839792
    906100 8w0u:C (2.8) BS01 FAD N/A GO:0001659 ... P28330 38839792
    906101 8w0u:C (2.8) BS02 FAD N/A GO:0001659 ... P28330 38839792
    906102 8w0u:D (2.8) BS01 FAD N/A GO:0001659 ... P28330 38839792
    906103 8w0u:D (2.8) BS02 FAD N/A GO:0001659 ... P28330 38839792
    906104 8w0z:A (2.0) BS01 FAD N/A GO:0001659 ... P28330 38839792
    906105 8w0z:A (2.0) BS02 FAD N/A GO:0001659 ... P28330 38839792
    906106 8w0z:B (2.0) BS01 FAD N/A GO:0001659 ... P28330 38839792
    906107 8w0z:B (2.0) BS02 FAD N/A GO:0001659 ... P28330 38839792
    906108 8w0z:C (2.0) BS01 FAD N/A GO:0001659 ... P28330 38839792
    906109 8w0z:C (2.0) BS02 FAD N/A GO:0001659 ... P28330 38839792
    906110 8w0z:D (2.0) BS01 FAD N/A GO:0001659 ... P28330 38839792
    906111 8w0z:D (2.0) BS02 FAD N/A GO:0001659 ... P28330 38839792
    906112 8w0z:E (2.0) BS01 FAD N/A GO:0001659 ... P28330 38839792
    906113 8w0z:E (2.0) BS02 FAD N/A GO:0001659 ... P28330 38839792
    906114 8w0z:F (2.0) BS01 FAD N/A GO:0001659 ... P28330 38839792
    906115 8w0z:F (2.0) BS02 FAD N/A GO:0001659 ... P28330 38839792
    906116 8w0z:G (2.0) BS01 FAD N/A GO:0001659 ... P28330 38839792
    906117 8w0z:G (2.0) BS02 FAD N/A GO:0001659 ... P28330 38839792
    906118 8w0z:H (2.0) BS01 FAD N/A GO:0001659 ... P28330 38839792
    906119 8w0z:H (2.0) BS02 FAD N/A GO:0001659 ... P28330 38839792
    906120 8w10:A (2.95) BS01 ZRN N/A GO:0004190 ... A5KAC3 41353980
    906121 8w10:B (2.95) BS01 ZRN N/A GO:0004190 ... A5KAC3 41353980
    906122 8w11:A (2.2) BS01 A1AET N/A GO:0000413 ... Q13526 N/A
    906123 8w11:A (2.2) BS02 A1AET N/A GO:0000413 ... Q13526 N/A
    906124 8w11:B (2.2) BS01 A1AET N/A GO:0000413 ... Q13526 N/A
    906125 8w11:B (2.2) BS02 A1AET N/A GO:0000413 ... Q13526 N/A
    906126 8w13:A (1.81) BS01 A1AEW N/A GO:0004402 ... Q9H7Z6 39236793
    906127 8w13:A (1.81) BS02 ZN N/A GO:0004402 ... Q9H7Z6 39236793
    906128 8w14:A (1.6) BS01 SO4 N/A N/A A0A654L513 39073218
    906129 8w14:B (1.6) BS01 SO4 N/A N/A A0A654L513 39073218
    906130 8w1d:A (1.3) BS01 FE2 ? GO:0004322 ... Q9HUT3 38841187
    906131 8w1d:A (1.3) BS02 FE2 ? GO:0004322 ... Q9HUT3 38841187
    906132 8w1e:A (2.9) BS01 FE2 ? GO:0004322 ... Q9HUT3 38841187
    906133 8w1e:A (2.9) BS02 FE2 ? GO:0004322 ... Q9HUT3 38841187
    906134 8w1e:B (2.9) BS01 FE2 ? GO:0004322 ... Q9HUT3 38841187
    906135 8w1e:B (2.9) BS02 FE2 ? GO:0004322 ... Q9HUT3 38841187
    906136 8w1e:C (2.9) BS01 FE2 ? GO:0004322 ... Q9HUT3 38841187
    906137 8w1e:C (2.9) BS02 FE2 ? GO:0004322 ... Q9HUT3 38841187
    906138 8w1e:D (2.9) BS01 FE2 ? GO:0004322 ... Q9HUT3 38841187
    906139 8w1e:D (2.9) BS02 FE2 ? GO:0004322 ... Q9HUT3 38841187
    906140 8w1e:E (2.9) BS01 FE2 ? GO:0004322 ... Q9HUT3 38841187
    906141 8w1e:E (2.9) BS02 FE2 ? GO:0004322 ... Q9HUT3 38841187
    906142 8w1e:F (2.9) BS01 FE2 ? GO:0004322 ... Q9HUT3 38841187
    906143 8w1e:F (2.9) BS02 FE2 ? GO:0004322 ... Q9HUT3 38841187
    906144 8w1e:G (2.9) BS01 FE2 ? GO:0004322 ... Q9HUT3 38841187
    906145 8w1e:G (2.9) BS02 FE2 ? GO:0004322 ... Q9HUT3 38841187
    906146 8w1e:H (2.9) BS01 FE2 ? GO:0004322 ... Q9HUT3 38841187
    906147 8w1e:H (2.9) BS02 FE2 ? GO:0004322 ... Q9HUT3 38841187
    906148 8w1e:I (2.9) BS01 FE2 ? GO:0004322 ... Q9HUT3 38841187
    906149 8w1e:I (2.9) BS02 FE2 ? GO:0004322 ... Q9HUT3 38841187
    906150 8w1e:J (2.9) BS01 FE2 ? GO:0004322 ... Q9HUT3 38841187
    906151 8w1e:J (2.9) BS02 FE2 ? GO:0004322 ... Q9HUT3 38841187
    906152 8w1e:K (2.9) BS01 FE2 ? GO:0004322 ... Q9HUT3 38841187
    906153 8w1e:K (2.9) BS02 FE2 ? GO:0004322 ... Q9HUT3 38841187
    906154 8w1e:L (2.9) BS01 FE2 ? GO:0004322 ... Q9HUT3 38841187
    906155 8w1e:L (2.9) BS02 FE2 ? GO:0004322 ... Q9HUT3 38841187
    906156 8w1f:A (3.0) BS01 MG ? GO:0004322 ... Q9HUT3 38841187
    906157 8w1f:A (3.0) BS02 FE2 ? GO:0004322 ... Q9HUT3 38841187
    906158 8w1f:A (3.0) BS03 FE2 ? GO:0004322 ... Q9HUT3 38841187
    906159 8w1f:B (3.0) BS01 MG ? GO:0004322 ... Q9HUT3 38841187
    906160 8w1f:B (3.0) BS02 FE2 ? GO:0004322 ... Q9HUT3 38841187
    906161 8w1f:B (3.0) BS03 FE2 ? GO:0004322 ... Q9HUT3 38841187
    906162 8w1f:C (3.0) BS01 MG ? GO:0004322 ... Q9HUT3 38841187
    906163 8w1f:C (3.0) BS02 FE2 ? GO:0004322 ... Q9HUT3 38841187
    906164 8w1f:C (3.0) BS03 FE2 ? GO:0004322 ... Q9HUT3 38841187
    906165 8w1f:D (3.0) BS01 MG ? GO:0004322 ... Q9HUT3 38841187
    906166 8w1f:D (3.0) BS02 FE2 ? GO:0004322 ... Q9HUT3 38841187
    906167 8w1f:D (3.0) BS03 FE2 ? GO:0004322 ... Q9HUT3 38841187
    906168 8w1f:E (3.0) BS01 MG ? GO:0004322 ... Q9HUT3 38841187
    906169 8w1f:E (3.0) BS02 FE2 ? GO:0004322 ... Q9HUT3 38841187
    906170 8w1f:E (3.0) BS03 FE2 ? GO:0004322 ... Q9HUT3 38841187
    906171 8w1f:F (3.0) BS01 MG ? GO:0004322 ... Q9HUT3 38841187
    906172 8w1f:F (3.0) BS02 FE2 ? GO:0004322 ... Q9HUT3 38841187
    906173 8w1f:F (3.0) BS03 FE2 ? GO:0004322 ... Q9HUT3 38841187
    906174 8w1f:G (3.0) BS01 MG ? GO:0004322 ... Q9HUT3 38841187
    906175 8w1f:G (3.0) BS02 FE2 ? GO:0004322 ... Q9HUT3 38841187
    906176 8w1f:G (3.0) BS03 FE2 ? GO:0004322 ... Q9HUT3 38841187
    906177 8w1f:H (3.0) BS01 MG ? GO:0004322 ... Q9HUT3 38841187
    906178 8w1f:H (3.0) BS02 FE2 ? GO:0004322 ... Q9HUT3 38841187
    906179 8w1f:H (3.0) BS03 FE2 ? GO:0004322 ... Q9HUT3 38841187
    906180 8w1f:I (3.0) BS01 MG ? GO:0004322 ... Q9HUT3 38841187
    906181 8w1f:I (3.0) BS02 FE2 ? GO:0004322 ... Q9HUT3 38841187
    906182 8w1f:I (3.0) BS03 FE2 ? GO:0004322 ... Q9HUT3 38841187
    906183 8w1f:J (3.0) BS01 MG ? GO:0004322 ... Q9HUT3 38841187
    906184 8w1f:J (3.0) BS02 FE2 ? GO:0004322 ... Q9HUT3 38841187
    906185 8w1f:J (3.0) BS03 FE2 ? GO:0004322 ... Q9HUT3 38841187
    906186 8w1f:K (3.0) BS01 MG ? GO:0004322 ... Q9HUT3 38841187
    906187 8w1f:K (3.0) BS02 FE2 ? GO:0004322 ... Q9HUT3 38841187
    906188 8w1f:K (3.0) BS03 FE2 ? GO:0004322 ... Q9HUT3 38841187
    906189 8w1f:L (3.0) BS01 MG ? GO:0004322 ... Q9HUT3 38841187
    906190 8w1f:L (3.0) BS02 FE2 ? GO:0004322 ... Q9HUT3 38841187
    906191 8w1f:L (3.0) BS03 FE2 ? GO:0004322 ... Q9HUT3 38841187
    906192 8w1h:A (2.1) BS01 HEM N/A GO:0004833 ... P48775 39106326
    906193 8w1h:A (2.1) BS02 ZIQ N/A GO:0004833 ... P48775 39106326
    906194 8w1h:A (2.1) BS03 A1AEY N/A GO:0004833 ... P48775 39106326
    906195 8w1h:A (2.1) BS04 A1AEY N/A GO:0004833 ... P48775 39106326
    906196 8w1h:B (2.1) BS01 A1AEY N/A GO:0004833 ... P48775 39106326
    906197 8w1h:B (2.1) BS02 HEM N/A GO:0004833 ... P48775 39106326
    906198 8w1h:B (2.1) BS03 ZIQ N/A GO:0004833 ... P48775 39106326
    906199 8w1h:B (2.1) BS04 A1AEY N/A GO:0004833 ... P48775 39106326
    906200 8w1h:C (2.1) BS01 HEM N/A GO:0004833 ... P48775 39106326

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).