SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    906201 8w1h:C (2.1) BS02 ZIQ N/A GO:0004833 ... P48775 39106326
    906202 8w1h:C (2.1) BS03 A1AEY N/A GO:0004833 ... P48775 39106326
    906203 8w1h:C (2.1) BS04 A1AEY N/A GO:0004833 ... P48775 39106326
    906204 8w1h:D (2.1) BS01 A1AEY N/A GO:0004833 ... P48775 39106326
    906205 8w1h:D (2.1) BS02 HEM N/A GO:0004833 ... P48775 39106326
    906206 8w1h:D (2.1) BS03 ZIQ N/A GO:0004833 ... P48775 39106326
    906207 8w1h:D (2.1) BS04 A1AEY N/A GO:0004833 ... P48775 39106326
    906208 8w1j:A (1.8) BS01 HEM N/A GO:0004497 ... C0XPZ5 39843428
    906209 8w1j:B (1.8) BS01 HEM N/A GO:0004497 ... C0XPZ5 39843428
    906210 8w1j:C (1.8) BS01 HEM N/A GO:0004497 ... C0XPZ5 39843428
    906211 8w1k:A (1.7) BS01 HEM N/A GO:0004497 ... C0XPZ5 39843428
    906212 8w1k:B (1.7) BS01 HEM N/A GO:0004497 ... C0XPZ5 39843428
    906213 8w1k:C (1.7) BS01 HEM N/A GO:0004497 ... C0XPZ5 39843428
    906214 8w1l:A (2.26) BS01 A1AE3 2.7.10.1 GO:0004672 ... P07333 38746878
    906215 8w1m:A (2.75) BS01 ADP N/A GO:0005524 ... Q56235 41092901
    906216 8w1m:A (2.75) BS02 CA N/A GO:0005524 ... Q56235 41092901
    906217 8w1m:A (2.75) BS03 CA N/A GO:0005524 ... Q56235 41092901
    906218 8w1m:A (2.75) BS04 CA N/A GO:0005524 ... Q56235 41092901
    906219 8w1m:B (2.75) BS01 ADP N/A GO:0005524 ... Q56235 41092901
    906220 8w1o:K (2.8) BS01 rna 2.7.7.48 GO:0000166 ... W0G557 38614100
    906221 8w1o:K (2.8) BS02 rna 2.7.7.48 GO:0000166 ... W0G557 38614100
    906222 8w1p:A (3.5) BS01 rna N/A N/A N/A 39111310
    906223 8w1p:A (3.5) BS02 dna N/A N/A N/A 39111310
    906224 8w1p:B (3.5) BS01 rna N/A N/A N/A 39111310
    906225 8w1p:B (3.5) BS02 dna N/A N/A N/A 39111310
    906226 8w1p:C (3.5) BS01 rna N/A N/A N/A 39111310
    906227 8w1p:C (3.5) BS02 dna N/A N/A N/A 39111310
    906228 8w1p:D (3.5) BS01 rna N/A N/A N/A 39111310
    906229 8w1p:D (3.5) BS02 dna N/A N/A N/A 39111310
    906230 8w1p:E (3.5) BS01 rna N/A N/A N/A 39111310
    906231 8w1p:E (3.5) BS02 dna N/A N/A N/A 39111310
    906232 8w1p:F (3.5) BS01 rna N/A N/A N/A 39111310
    906233 8w1p:G (3.5) BS01 dna N/A GO:0003676 ... N/A 39111310
    906234 8w1p:G (3.5) BS02 rna N/A GO:0003676 ... N/A 39111310
    906235 8w1p:G (3.5) BS03 dna N/A GO:0003676 ... N/A 39111310
    906236 8w1p:H (3.5) BS01 rna N/A N/A N/A 39111310
    906237 8w1p:H (3.5) BS02 dna N/A N/A N/A 39111310
    906238 8w1p:I (3.5) BS01 rna N/A GO:0004519 ... N/A 39111310
    906239 8w1q:A (1.56) BS01 FE2 N/A GO:0004553 ... Q9HY91 39220707
    906240 8w1q:B (1.56) BS01 FE2 N/A GO:0004553 ... Q9HY91 39220707
    906241 8w1t:A (1.76) BS01 A1A21 N/A GO:0008233 ... P0DTC1 39504242
    906242 8w1t:A (1.76) BS02 A1AFD N/A GO:0008233 ... P0DTC1 39504242
    906243 8w1t:B (1.76) BS01 A1AFD N/A GO:0008233 ... P0DTC1 39504242
    906244 8w1t:B (1.76) BS02 A1A21 N/A GO:0008233 ... P0DTC1 39504242
    906245 8w1u:A (2.05) BS01 A1AFE N/A GO:0008233 ... P0DTD1 39504242
    906246 8w1u:B (2.05) BS01 A1AFE N/A GO:0008233 ... P0DTD1 39504242
    906247 8w1v:A (3.0) BS01 A1AE2 N/A GO:0003796 ... P00720
    P07550
    38952152
    906248 8w1v:A (3.0) BS02 AV0 N/A GO:0003796 ... P00720
    P07550
    38952152
    906249 8w1v:B (3.0) BS01 A1AE2 N/A GO:0003796 ... P00720
    P07550
    38952152
    906250 8w1v:B (3.0) BS02 AV0 N/A GO:0003796 ... P00720
    P07550
    38952152
    906251 8w1w:A (2.033) BS01 HEM N/A GO:0004096 ... P9WIE5 39300819
    906252 8w1w:B (2.033) BS01 HEM N/A GO:0004096 ... P9WIE5 39300819
    906253 8w1w:C (2.033) BS01 HEM N/A GO:0004096 ... P9WIE5 39300819
    906254 8w1w:D (2.033) BS01 HEM N/A GO:0004096 ... P9WIE5 39300819
    906255 8w1x:A (2.35) BS01 HEM N/A GO:0004096 ... P9WIE5 39300819
    906256 8w1x:A (2.35) BS02 OXY N/A GO:0004096 ... P9WIE5 39300819
    906257 8w1x:B (2.35) BS01 HEM N/A GO:0004096 ... P9WIE5 39300819
    906258 8w1y:A (2.3) BS01 HEM N/A GO:0004096 ... P9WIE5 39300819
    906259 8w1y:B (2.3) BS01 HEM N/A GO:0004096 ... P9WIE5 39300819
    906260 8w1y:C (2.3) BS01 HEM N/A GO:0004096 ... P9WIE5 39300819
    906261 8w1y:D (2.3) BS01 HEM N/A GO:0004096 ... P9WIE5 39300819
    906262 8w1z:A (3.79) BS01 CLR N/A N/A G5EG04 41315418
    906263 8w1z:B (3.79) BS01 CLR N/A N/A G5EG04 41315418
    906264 8w21:A (2.25) BS01 MG 4.2.1.11 GO:0000015 ... O84591 N/A
    906265 8w21:B (2.25) BS01 MG 4.2.1.11 GO:0000015 ... O84591 N/A
    906266 8w21:C (2.25) BS01 MG 4.2.1.11 GO:0000015 ... O84591 N/A
    906267 8w21:E (2.25) BS01 MG 4.2.1.11 GO:0000015 ... O84591 N/A
    906268 8w21:G (2.25) BS01 MG 4.2.1.11 GO:0000015 ... O84591 N/A
    906269 8w21:H (2.25) BS01 MG 4.2.1.11 GO:0000015 ... O84591 N/A
    906270 8w23:A (2.28) BS01 ZN N/A GO:0003950 ... Q9H2K2 40093088
    906271 8w23:A (2.28) BS02 A1AE4 N/A GO:0003950 ... Q9H2K2 40093088
    906272 8w23:B (2.28) BS01 ZN N/A GO:0003950 ... Q9H2K2 40093088
    906273 8w23:B (2.28) BS02 A1AE4 N/A GO:0003950 ... Q9H2K2 40093088
    906274 8w23:C (2.28) BS01 ZN N/A GO:0003950 ... Q9H2K2 40093088
    906275 8w23:C (2.28) BS02 A1AE4 N/A GO:0003950 ... Q9H2K2 40093088
    906276 8w23:D (2.28) BS01 ZN N/A GO:0003950 ... Q9H2K2 40093088
    906277 8w23:D (2.28) BS02 A1AE4 N/A GO:0003950 ... Q9H2K2 40093088
    906278 8w23:E (2.28) BS01 ZN N/A GO:0003950 ... Q9H2K2 40093088
    906279 8w23:E (2.28) BS02 A1AE4 N/A GO:0003950 ... Q9H2K2 40093088
    906280 8w23:F (2.28) BS01 ZN N/A GO:0003950 ... Q9H2K2 40093088
    906281 8w23:F (2.28) BS02 A1AE4 N/A GO:0003950 ... Q9H2K2 40093088
    906282 8w23:G (2.28) BS01 ZN N/A GO:0003950 ... Q9H2K2 40093088
    906283 8w23:G (2.28) BS02 A1AE4 N/A GO:0003950 ... Q9H2K2 40093088
    906284 8w23:H (2.28) BS01 ZN N/A GO:0003950 ... Q9H2K2 40093088
    906285 8w23:H (2.28) BS02 A1AE4 N/A GO:0003950 ... Q9H2K2 40093088
    906286 8w23:I (2.28) BS01 ZN N/A GO:0003950 ... Q9H2K2 40093088
    906287 8w23:I (2.28) BS02 A1AE4 N/A GO:0003950 ... Q9H2K2 40093088
    906288 8w23:K (2.28) BS01 ZN N/A GO:0003950 ... Q9H2K2 40093088
    906289 8w23:K (2.28) BS02 A1AE4 N/A GO:0003950 ... Q9H2K2 40093088
    906290 8w23:L (2.28) BS01 ZN N/A GO:0003950 ... Q9H2K2 40093088
    906291 8w23:L (2.28) BS02 A1AE4 N/A GO:0003950 ... Q9H2K2 40093088
    906292 8w23:M (2.28) BS01 ZN N/A GO:0003950 ... Q9H2K2 40093088
    906293 8w23:M (2.28) BS02 A1AE4 N/A GO:0003950 ... Q9H2K2 40093088
    906294 8w23:N (2.28) BS01 ZN N/A GO:0003950 ... Q9H2K2 40093088
    906295 8w23:N (2.28) BS02 A1AE4 N/A GO:0003950 ... Q9H2K2 40093088
    906296 8w23:O (2.28) BS01 ZN N/A GO:0003950 ... Q9H2K2 40093088
    906297 8w23:O (2.28) BS02 A1AE4 N/A GO:0003950 ... Q9H2K2 40093088
    906298 8w23:P (2.28) BS01 ZN N/A GO:0003950 ... Q9H2K2 40093088
    906299 8w23:P (2.28) BS02 A1AE4 N/A GO:0003950 ... Q9H2K2 40093088
    906300 8w23:Q (2.28) BS01 ZN N/A GO:0003950 ... Q9H2K2 40093088
    906301 8w23:Q (2.28) BS02 A1AE4 N/A GO:0003950 ... Q9H2K2 40093088
    906302 8w23:R (2.28) BS01 ZN N/A GO:0003950 ... Q9H2K2 40093088
    906303 8w23:R (2.28) BS02 A1AE4 N/A GO:0003950 ... Q9H2K2 40093088
    906304 8w23:S (2.28) BS01 ZN N/A GO:0003950 ... Q9H2K2 40093088
    906305 8w23:S (2.28) BS02 A1AE4 N/A GO:0003950 ... Q9H2K2 40093088
    906306 8w23:T (2.28) BS01 ZN N/A GO:0003950 ... Q9H2K2 40093088
    906307 8w23:T (2.28) BS02 A1AE4 N/A GO:0003950 ... Q9H2K2 40093088
    906308 8w23:U (2.28) BS01 ZN N/A GO:0003950 ... Q9H2K2 40093088
    906309 8w23:U (2.28) BS02 A1AE4 N/A GO:0003950 ... Q9H2K2 40093088
    906310 8w25:D (2.42) BS01 ZN N/A GO:0003950 ... Q9H2K2 40093088
    906311 8w25:D (2.42) BS02 A1AE4 N/A GO:0003950 ... Q9H2K2 40093088
    906312 8w25:Q (2.42) BS01 ZN N/A GO:0003950 ... Q9H2K2 40093088
    906313 8w25:Q (2.42) BS02 A1AE4 N/A GO:0003950 ... Q9H2K2 40093088
    906314 8w27:A (2.21) BS01 XAV N/A GO:0003950 ... Q9H2K2 40093088
    906315 8w27:A (2.21) BS02 ZN N/A GO:0003950 ... Q9H2K2 40093088
    906316 8w27:B (2.21) BS01 XAV N/A GO:0003950 ... Q9H2K2 40093088
    906317 8w27:B (2.21) BS02 ZN N/A GO:0003950 ... Q9H2K2 40093088
    906318 8w27:C (2.21) BS01 XAV N/A GO:0003950 ... Q9H2K2 40093088
    906319 8w27:C (2.21) BS02 ZN N/A GO:0003950 ... Q9H2K2 40093088
    906320 8w27:D (2.21) BS01 XAV N/A GO:0003950 ... Q9H2K2 40093088
    906321 8w27:D (2.21) BS02 ZN N/A GO:0003950 ... Q9H2K2 40093088
    906322 8w27:E (2.21) BS01 XAV N/A GO:0003950 ... Q9H2K2 40093088
    906323 8w27:E (2.21) BS02 ZN N/A GO:0003950 ... Q9H2K2 40093088
    906324 8w27:F (2.21) BS01 XAV N/A GO:0003950 ... Q9H2K2 40093088
    906325 8w27:F (2.21) BS02 ZN N/A GO:0003950 ... Q9H2K2 40093088
    906326 8w27:G (2.21) BS01 XAV N/A GO:0003950 ... Q9H2K2 40093088
    906327 8w27:G (2.21) BS02 ZN N/A GO:0003950 ... Q9H2K2 40093088
    906328 8w27:H (2.21) BS01 XAV N/A GO:0003950 ... Q9H2K2 40093088
    906329 8w27:H (2.21) BS02 ZN N/A GO:0003950 ... Q9H2K2 40093088
    906330 8w27:I (2.21) BS01 XAV N/A GO:0003950 ... Q9H2K2 40093088
    906331 8w27:I (2.21) BS02 ZN N/A GO:0003950 ... Q9H2K2 40093088
    906332 8w27:J (2.21) BS01 XAV N/A GO:0003950 ... Q9H2K2 40093088
    906333 8w27:J (2.21) BS02 ZN N/A GO:0003950 ... Q9H2K2 40093088
    906334 8w27:L (2.21) BS01 XAV N/A GO:0003950 ... Q9H2K2 40093088
    906335 8w27:L (2.21) BS02 ZN N/A GO:0003950 ... Q9H2K2 40093088
    906336 8w27:M (2.21) BS01 XAV N/A GO:0003950 ... Q9H2K2 40093088
    906337 8w27:M (2.21) BS02 ZN N/A GO:0003950 ... Q9H2K2 40093088
    906338 8w27:N (2.21) BS01 XAV N/A GO:0003950 ... Q9H2K2 40093088
    906339 8w27:N (2.21) BS02 ZN N/A GO:0003950 ... Q9H2K2 40093088
    906340 8w27:O (2.21) BS01 XAV N/A GO:0003950 ... Q9H2K2 40093088
    906341 8w27:O (2.21) BS02 ZN N/A GO:0003950 ... Q9H2K2 40093088
    906342 8w27:P (2.21) BS01 XAV N/A GO:0003950 ... Q9H2K2 40093088
    906343 8w27:P (2.21) BS02 ZN N/A GO:0003950 ... Q9H2K2 40093088
    906344 8w27:Q (2.21) BS01 XAV N/A GO:0003950 ... Q9H2K2 40093088
    906345 8w27:Q (2.21) BS02 ZN N/A GO:0003950 ... Q9H2K2 40093088
    906346 8w27:R (2.21) BS01 XAV N/A GO:0003950 ... Q9H2K2 40093088
    906347 8w27:R (2.21) BS02 ZN N/A GO:0003950 ... Q9H2K2 40093088
    906348 8w27:S (2.21) BS01 XAV N/A GO:0003950 ... Q9H2K2 40093088
    906349 8w27:S (2.21) BS02 ZN N/A GO:0003950 ... Q9H2K2 40093088
    906350 8w27:T (2.21) BS01 XAV N/A GO:0003950 ... Q9H2K2 40093088
    906351 8w27:T (2.21) BS02 ZN N/A GO:0003950 ... Q9H2K2 40093088
    906352 8w27:U (2.21) BS01 XAV N/A GO:0003950 ... Q9H2K2 40093088
    906353 8w27:U (2.21) BS02 ZN N/A GO:0003950 ... Q9H2K2 40093088
    906354 8w28:D (2.19) BS01 XAV N/A GO:0003950 ... Q9H2K2 40093088
    906355 8w28:D (2.19) BS02 ZN N/A GO:0003950 ... Q9H2K2 40093088
    906356 8w28:Q (2.19) BS01 XAV N/A GO:0003950 ... Q9H2K2 40093088
    906357 8w28:Q (2.19) BS02 ZN N/A GO:0003950 ... Q9H2K2 40093088
    906358 8w2d:A (2.7) BS01 PNS N/A GO:0031177 ... A0A1I9RH13 38908753
    906359 8w2d:B (2.7) BS01 PNS N/A GO:0031177 ... A0A1I9RH13 38908753
    906360 8w2e:A (3.06) BS01 A1AE8 N/A GO:0005515 ... P0DTC5 40140563
    906361 8w2e:A (3.06) BS02 A1AE8 N/A GO:0005515 ... P0DTC5 40140563
    906362 8w2e:B (3.06) BS01 A1AE8 N/A GO:0005515 ... P0DTC5 40140563
    906363 8w2e:B (3.06) BS02 A1AE8 N/A GO:0005515 ... P0DTC5 40140563
    906364 8w2f:L (3.1) BS01 A1AE6 N/A GO:0004298 ... Q8IJT1 39084225
    906365 8w2f:M (3.1) BS01 A1AE6 N/A GO:0005634 ... A0A5K1K7U1 39084225
    906366 8w2f:Z (3.1) BS01 A1AE6 N/A GO:0004298 ... Q8IJT1 39084225
    906367 8w2f:a (3.1) BS01 A1AE6 N/A GO:0005634 ... A0A5K1K7U1 39084225
    906368 8w2g:A (3.0) BS01 F6P N/A GO:0003872 ... P17858 39183237
    906369 8w2g:A (3.0) BS02 ADP N/A GO:0003872 ... P17858 39183237
    906370 8w2g:A (3.0) BS03 ADP N/A GO:0003872 ... P17858 39183237
    906371 8w2g:A (3.0) BS04 ADP N/A GO:0003872 ... P17858 39183237
    906372 8w2g:A (3.0) BS05 FBP N/A GO:0003872 ... P17858 39183237
    906373 8w2g:A (3.0) BS06 F6P N/A GO:0003872 ... P17858 39183237
    906374 8w2g:A (3.0) BS07 FBP N/A GO:0003872 ... P17858 39183237
    906375 8w2g:B (3.0) BS01 F6P N/A GO:0003872 ... P17858 39183237
    906376 8w2g:B (3.0) BS02 FBP N/A GO:0003872 ... P17858 39183237
    906377 8w2g:B (3.0) BS03 F6P N/A GO:0003872 ... P17858 39183237
    906378 8w2g:B (3.0) BS04 ADP N/A GO:0003872 ... P17858 39183237
    906379 8w2g:B (3.0) BS05 ADP N/A GO:0003872 ... P17858 39183237
    906380 8w2g:B (3.0) BS06 ADP N/A GO:0003872 ... P17858 39183237
    906381 8w2g:B (3.0) BS07 FBP N/A GO:0003872 ... P17858 39183237
    906382 8w2g:C (3.0) BS01 F6P N/A GO:0003872 ... P17858 39183237
    906383 8w2g:C (3.0) BS02 F6P N/A GO:0003872 ... P17858 39183237
    906384 8w2g:C (3.0) BS03 ADP N/A GO:0003872 ... P17858 39183237
    906385 8w2g:C (3.0) BS04 ADP N/A GO:0003872 ... P17858 39183237
    906386 8w2g:C (3.0) BS05 ADP N/A GO:0003872 ... P17858 39183237
    906387 8w2g:C (3.0) BS06 FBP N/A GO:0003872 ... P17858 39183237
    906388 8w2g:D (3.0) BS01 F6P N/A GO:0003872 ... P17858 39183237
    906389 8w2g:D (3.0) BS02 ADP N/A GO:0003872 ... P17858 39183237
    906390 8w2g:D (3.0) BS03 ADP N/A GO:0003872 ... P17858 39183237
    906391 8w2g:D (3.0) BS04 ADP N/A GO:0003872 ... P17858 39183237
    906392 8w2g:D (3.0) BS05 FBP N/A GO:0003872 ... P17858 39183237
    906393 8w2g:D (3.0) BS06 F6P N/A GO:0003872 ... P17858 39183237
    906394 8w2h:A (2.6) BS01 FBP N/A GO:0003872 ... P17858 39183237
    906395 8w2h:A (2.6) BS02 ATP N/A GO:0003872 ... P17858 39183237
    906396 8w2h:A (2.6) BS03 ATP N/A GO:0003872 ... P17858 39183237
    906397 8w2h:A (2.6) BS04 ATP N/A GO:0003872 ... P17858 39183237
    906398 8w2h:A (2.6) BS05 FBP N/A GO:0003872 ... P17858 39183237
    906399 8w2h:B (2.6) BS01 FBP N/A GO:0003872 ... P17858 39183237
    906400 8w2h:B (2.6) BS02 FBP N/A GO:0003872 ... P17858 39183237

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).