SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    906401 8w2h:B (2.6) BS03 ATP N/A GO:0003872 ... P17858 39183237
    906402 8w2h:B (2.6) BS04 ATP N/A GO:0003872 ... P17858 39183237
    906403 8w2h:B (2.6) BS05 ATP N/A GO:0003872 ... P17858 39183237
    906404 8w2h:C (2.6) BS01 FBP N/A GO:0003872 ... P17858 39183237
    906405 8w2h:C (2.6) BS02 ATP N/A GO:0003872 ... P17858 39183237
    906406 8w2h:C (2.6) BS03 ATP N/A GO:0003872 ... P17858 39183237
    906407 8w2h:C (2.6) BS04 ATP N/A GO:0003872 ... P17858 39183237
    906408 8w2h:C (2.6) BS05 FBP N/A GO:0003872 ... P17858 39183237
    906409 8w2h:D (2.6) BS01 FBP N/A GO:0003872 ... P17858 39183237
    906410 8w2h:D (2.6) BS02 FBP N/A GO:0003872 ... P17858 39183237
    906411 8w2h:D (2.6) BS03 ATP N/A GO:0003872 ... P17858 39183237
    906412 8w2h:D (2.6) BS04 ATP N/A GO:0003872 ... P17858 39183237
    906413 8w2h:D (2.6) BS05 ATP N/A GO:0003872 ... P17858 39183237
    906414 8w2i:A (3.6) BS01 F6P N/A GO:0003872 ... P17858 39183237
    906415 8w2i:A (3.6) BS02 ADP N/A GO:0003872 ... P17858 39183237
    906416 8w2i:A (3.6) BS03 ADP N/A GO:0003872 ... P17858 39183237
    906417 8w2i:A (3.6) BS04 ADP N/A GO:0003872 ... P17858 39183237
    906418 8w2i:A (3.6) BS05 FBP N/A GO:0003872 ... P17858 39183237
    906419 8w2i:A (3.6) BS06 F6P N/A GO:0003872 ... P17858 39183237
    906420 8w2i:B (3.6) BS01 F6P N/A GO:0003872 ... P17858 39183237
    906421 8w2i:B (3.6) BS02 F6P N/A GO:0003872 ... P17858 39183237
    906422 8w2i:B (3.6) BS03 ADP N/A GO:0003872 ... P17858 39183237
    906423 8w2i:B (3.6) BS04 ADP N/A GO:0003872 ... P17858 39183237
    906424 8w2i:B (3.6) BS05 FBP N/A GO:0003872 ... P17858 39183237
    906425 8w2i:C (3.6) BS01 ADP N/A GO:0003872 ... P17858 39183237
    906426 8w2i:C (3.6) BS02 ADP N/A GO:0003872 ... P17858 39183237
    906427 8w2i:C (3.6) BS03 ADP N/A GO:0003872 ... P17858 39183237
    906428 8w2i:C (3.6) BS04 FBP N/A GO:0003872 ... P17858 39183237
    906429 8w2i:C (3.6) BS05 F6P N/A GO:0003872 ... P17858 39183237
    906430 8w2i:C (3.6) BS06 F6P N/A GO:0003872 ... P17858 39183237
    906431 8w2i:D (3.6) BS01 FBP N/A GO:0003872 ... P17858 39183237
    906432 8w2i:D (3.6) BS02 F6P N/A GO:0003872 ... P17858 39183237
    906433 8w2i:D (3.6) BS03 F6P N/A GO:0003872 ... P17858 39183237
    906434 8w2i:D (3.6) BS04 ADP N/A GO:0003872 ... P17858 39183237
    906435 8w2i:D (3.6) BS05 ADP N/A GO:0003872 ... P17858 39183237
    906436 8w2i:D (3.6) BS06 ADP N/A GO:0003872 ... P17858 39183237
    906437 8w2i:D (3.6) BS07 FBP N/A GO:0003872 ... P17858 39183237
    906438 8w2i:E (3.6) BS01 F6P N/A GO:0003872 ... P17858 39183237
    906439 8w2i:E (3.6) BS02 ADP N/A GO:0003872 ... P17858 39183237
    906440 8w2i:E (3.6) BS03 ADP N/A GO:0003872 ... P17858 39183237
    906441 8w2i:E (3.6) BS04 ADP N/A GO:0003872 ... P17858 39183237
    906442 8w2i:E (3.6) BS05 FBP N/A GO:0003872 ... P17858 39183237
    906443 8w2i:E (3.6) BS06 F6P N/A GO:0003872 ... P17858 39183237
    906444 8w2i:E (3.6) BS07 FBP N/A GO:0003872 ... P17858 39183237
    906445 8w2i:F (3.6) BS01 F6P N/A GO:0003872 ... P17858 39183237
    906446 8w2i:F (3.6) BS02 F6P N/A GO:0003872 ... P17858 39183237
    906447 8w2i:F (3.6) BS03 ADP N/A GO:0003872 ... P17858 39183237
    906448 8w2i:F (3.6) BS04 ADP N/A GO:0003872 ... P17858 39183237
    906449 8w2i:F (3.6) BS05 ADP N/A GO:0003872 ... P17858 39183237
    906450 8w2i:F (3.6) BS06 FBP N/A GO:0003872 ... P17858 39183237
    906451 8w2i:G (3.6) BS01 F6P N/A GO:0003872 ... P17858 39183237
    906452 8w2i:G (3.6) BS02 ADP N/A GO:0003872 ... P17858 39183237
    906453 8w2i:G (3.6) BS03 ADP N/A GO:0003872 ... P17858 39183237
    906454 8w2i:G (3.6) BS04 FBP N/A GO:0003872 ... P17858 39183237
    906455 8w2i:G (3.6) BS05 F6P N/A GO:0003872 ... P17858 39183237
    906456 8w2i:H (3.6) BS01 F6P N/A GO:0003872 ... P17858 39183237
    906457 8w2i:H (3.6) BS02 F6P N/A GO:0003872 ... P17858 39183237
    906458 8w2i:H (3.6) BS03 ADP N/A GO:0003872 ... P17858 39183237
    906459 8w2i:H (3.6) BS04 ADP N/A GO:0003872 ... P17858 39183237
    906460 8w2i:H (3.6) BS05 ADP N/A GO:0003872 ... P17858 39183237
    906461 8w2i:H (3.6) BS06 FBP N/A GO:0003872 ... P17858 39183237
    906462 8w2j:A (3.1) BS01 FBP N/A GO:0003872 ... P17858 39183237
    906463 8w2j:A (3.1) BS02 ATP N/A GO:0003872 ... P17858 39183237
    906464 8w2j:A (3.1) BS03 ATP N/A GO:0003872 ... P17858 39183237
    906465 8w2j:A (3.1) BS04 ATP N/A GO:0003872 ... P17858 39183237
    906466 8w2j:A (3.1) BS05 FBP N/A GO:0003872 ... P17858 39183237
    906467 8w2j:B (3.1) BS01 FBP N/A GO:0003872 ... P17858 39183237
    906468 8w2j:B (3.1) BS02 FBP N/A GO:0003872 ... P17858 39183237
    906469 8w2j:B (3.1) BS03 ATP N/A GO:0003872 ... P17858 39183237
    906470 8w2j:B (3.1) BS04 ATP N/A GO:0003872 ... P17858 39183237
    906471 8w2j:B (3.1) BS05 ATP N/A GO:0003872 ... P17858 39183237
    906472 8w2j:C (3.1) BS01 FBP N/A GO:0003872 ... P17858 39183237
    906473 8w2j:C (3.1) BS02 ATP N/A GO:0003872 ... P17858 39183237
    906474 8w2j:C (3.1) BS03 ATP N/A GO:0003872 ... P17858 39183237
    906475 8w2j:C (3.1) BS04 ATP N/A GO:0003872 ... P17858 39183237
    906476 8w2j:C (3.1) BS05 FBP N/A GO:0003872 ... P17858 39183237
    906477 8w2j:D (3.1) BS01 FBP N/A GO:0003872 ... P17858 39183237
    906478 8w2j:D (3.1) BS02 FBP N/A GO:0003872 ... P17858 39183237
    906479 8w2j:D (3.1) BS03 ATP N/A GO:0003872 ... P17858 39183237
    906480 8w2j:D (3.1) BS04 ATP N/A GO:0003872 ... P17858 39183237
    906481 8w2j:D (3.1) BS05 ATP N/A GO:0003872 ... P17858 39183237
    906482 8w2j:E (3.1) BS01 FBP N/A GO:0003872 ... P17858 39183237
    906483 8w2j:E (3.1) BS02 ATP N/A GO:0003872 ... P17858 39183237
    906484 8w2j:E (3.1) BS03 ATP N/A GO:0003872 ... P17858 39183237
    906485 8w2j:E (3.1) BS04 ATP N/A GO:0003872 ... P17858 39183237
    906486 8w2j:E (3.1) BS05 FBP N/A GO:0003872 ... P17858 39183237
    906487 8w2j:F (3.1) BS01 FBP N/A GO:0003872 ... P17858 39183237
    906488 8w2j:F (3.1) BS02 FBP N/A GO:0003872 ... P17858 39183237
    906489 8w2j:F (3.1) BS03 ATP N/A GO:0003872 ... P17858 39183237
    906490 8w2j:F (3.1) BS04 ATP N/A GO:0003872 ... P17858 39183237
    906491 8w2j:F (3.1) BS05 ATP N/A GO:0003872 ... P17858 39183237
    906492 8w2j:G (3.1) BS01 FBP N/A GO:0003872 ... P17858 39183237
    906493 8w2j:G (3.1) BS02 ATP N/A GO:0003872 ... P17858 39183237
    906494 8w2j:G (3.1) BS03 ATP N/A GO:0003872 ... P17858 39183237
    906495 8w2j:G (3.1) BS04 ATP N/A GO:0003872 ... P17858 39183237
    906496 8w2j:G (3.1) BS05 FBP N/A GO:0003872 ... P17858 39183237
    906497 8w2j:H (3.1) BS01 FBP N/A GO:0003872 ... P17858 39183237
    906498 8w2j:H (3.1) BS02 FBP N/A GO:0003872 ... P17858 39183237
    906499 8w2j:H (3.1) BS03 ATP N/A GO:0003872 ... P17858 39183237
    906500 8w2j:H (3.1) BS04 ATP N/A GO:0003872 ... P17858 39183237
    906501 8w2j:H (3.1) BS05 ATP N/A GO:0003872 ... P17858 39183237
    906502 8w2k:A (2.45) BS01 HEM N/A GO:0004833 ... P48775 39106326
    906503 8w2k:A (2.45) BS02 ZIQ N/A GO:0004833 ... P48775 39106326
    906504 8w2k:A (2.45) BS03 A1AE7 N/A GO:0004833 ... P48775 39106326
    906505 8w2k:A (2.45) BS04 A1AE7 N/A GO:0004833 ... P48775 39106326
    906506 8w2k:B (2.45) BS01 A1AE7 N/A GO:0004833 ... P48775 39106326
    906507 8w2k:B (2.45) BS02 HEM N/A GO:0004833 ... P48775 39106326
    906508 8w2k:B (2.45) BS03 ZIQ N/A GO:0004833 ... P48775 39106326
    906509 8w2k:B (2.45) BS04 A1AE7 N/A GO:0004833 ... P48775 39106326
    906510 8w2k:C (2.45) BS01 HEM N/A GO:0004833 ... P48775 39106326
    906511 8w2k:C (2.45) BS02 ZIQ N/A GO:0004833 ... P48775 39106326
    906512 8w2k:C (2.45) BS03 A1AE7 N/A GO:0004833 ... P48775 39106326
    906513 8w2k:C (2.45) BS04 A1AE7 N/A GO:0004833 ... P48775 39106326
    906514 8w2k:D (2.45) BS01 A1AE7 N/A GO:0004833 ... P48775 39106326
    906515 8w2k:D (2.45) BS02 HEM N/A GO:0004833 ... P48775 39106326
    906516 8w2k:D (2.45) BS03 ZIQ N/A GO:0004833 ... P48775 39106326
    906517 8w2k:D (2.45) BS04 A1AE7 N/A GO:0004833 ... P48775 39106326
    906518 8w2l:A (2.45) BS01 CLR 2.7.11.1 GO:0006091 ... P42212
    Q923J1
    38615321
    906519 8w2l:A (2.45) BS02 M05 2.7.11.1 GO:0006091 ... P42212
    Q923J1
    38615321
    906520 8w2l:A (2.45) BS03 DU0 2.7.11.1 GO:0006091 ... P42212
    Q923J1
    38615321
    906521 8w2l:B (2.45) BS01 DU0 2.7.11.1 GO:0006091 ... P42212
    Q923J1
    38615321
    906522 8w2l:B (2.45) BS02 CLR 2.7.11.1 GO:0006091 ... P42212
    Q923J1
    38615321
    906523 8w2l:B (2.45) BS03 M05 2.7.11.1 GO:0006091 ... P42212
    Q923J1
    38615321
    906524 8w2l:C (2.45) BS01 CLR 2.7.11.1 GO:0006091 ... P42212
    Q923J1
    38615321
    906525 8w2l:C (2.45) BS02 DU0 2.7.11.1 GO:0006091 ... P42212
    Q923J1
    38615321
    906526 8w2l:C (2.45) BS03 CLR 2.7.11.1 GO:0006091 ... P42212
    Q923J1
    38615321
    906527 8w2l:C (2.45) BS04 M05 2.7.11.1 GO:0006091 ... P42212
    Q923J1
    38615321
    906528 8w2l:D (2.45) BS01 CLR 2.7.11.1 GO:0006091 ... P42212
    Q923J1
    38615321
    906529 8w2l:D (2.45) BS02 DU0 2.7.11.1 GO:0006091 ... P42212
    Q923J1
    38615321
    906530 8w2l:D (2.45) BS03 CLR 2.7.11.1 GO:0006091 ... P42212
    Q923J1
    38615321
    906531 8w2l:D (2.45) BS04 M05 2.7.11.1 GO:0006091 ... P42212
    Q923J1
    38615321
    906532 8w2n:6 (3.2) BS01 rna N/A GO:0003746 ... P0A6N4 N/A
    906533 8w2n:6 (3.2) BS02 rna N/A GO:0003746 ... P0A6N4 N/A
    906534 8w2n:6 (3.2) BS03 rna N/A GO:0003746 ... P0A6N4 N/A
    906535 8w2n:6 (3.2) BS04 rna N/A GO:0003746 ... P0A6N4 N/A
    906536 8w2n:B (3.2) BS01 rna N/A GO:0000027 ... P60422 N/A
    906537 8w2n:C (3.2) BS01 rna N/A GO:0000027 ... P60438 N/A
    906538 8w2n:D (3.2) BS01 rna N/A GO:0001070 ... P60723 N/A
    906539 8w2n:E (3.2) BS01 rna N/A GO:0003735 ... N/A N/A
    906540 8w2n:E (3.2) BS02 rna N/A GO:0003735 ... N/A N/A
    906541 8w2n:E (3.2) BS03 rna N/A GO:0003735 ... N/A N/A
    906542 8w2n:F (3.2) BS01 rna N/A GO:0000027 ... P0AG55 N/A
    906543 8w2n:G (3.2) BS01 rna N/A GO:0002181 ... P0A7R1 N/A
    906544 8w2n:J (3.2) BS01 rna N/A GO:0003735 ... N/A N/A
    906545 8w2n:K (3.2) BS01 rna N/A GO:0002181 ... P0ADY3 N/A
    906546 8w2n:K (3.2) BS02 rna N/A GO:0002181 ... P0ADY3 N/A
    906547 8w2n:L (3.2) BS01 rna N/A GO:0002181 ... P02413 N/A
    906548 8w2n:M (3.2) BS01 rna N/A GO:0000027 ... P0ADY7 N/A
    906549 8w2n:M (3.2) BS02 rna N/A GO:0000027 ... P0ADY7 N/A
    906550 8w2n:N (3.2) BS01 rna N/A GO:0000027 ... P0AG44 N/A
    906551 8w2n:O (3.2) BS01 rna N/A GO:0003735 ... N/A N/A
    906552 8w2n:O (3.2) BS02 rna N/A GO:0003735 ... N/A N/A
    906553 8w2n:P (3.2) BS01 rna N/A GO:0003735 ... N/A N/A
    906554 8w2n:P (3.2) BS02 rna N/A GO:0003735 ... N/A N/A
    906555 8w2n:Q (3.2) BS01 rna N/A GO:0000027 ... P0A7L3 N/A
    906556 8w2n:R (3.2) BS01 rna N/A GO:0002181 ... P0AG48 N/A
    906557 8w2n:S (3.2) BS01 rna N/A GO:0002181 ... P61175 N/A
    906558 8w2n:T (3.2) BS01 rna N/A GO:0003735 ... N/A N/A
    906559 8w2n:U (3.2) BS01 rna N/A GO:0003723 ... N/A N/A
    906560 8w2n:V (3.2) BS01 rna N/A GO:0003735 ... N/A N/A
    906561 8w2n:W (3.2) BS01 rna N/A GO:0000027 ... P0A7L8 N/A
    906562 8w2n:W (3.2) BS02 rna N/A GO:0000027 ... P0A7L8 N/A
    906563 8w2n:X (3.2) BS01 rna N/A GO:0000027 ... P0A7M2 N/A
    906564 8w2n:Y (3.2) BS01 rna N/A GO:0003735 ... N/A N/A
    906565 8w2n:Z (3.2) BS01 rna N/A GO:0000027 ... P0AG51 N/A
    906566 8w2n:Z (3.2) BS02 rna N/A GO:0000027 ... P0AG51 N/A
    906567 8w2n:a (3.2) BS01 rna N/A GO:0002181 ... P0A7M9 N/A
    906568 8w2n:b (3.2) BS01 rna N/A GO:0003735 ... N/A N/A
    906569 8w2n:c (3.2) BS01 rna N/A GO:0000027 ... P0A7N9 N/A
    906570 8w2n:d (3.2) BS01 rna N/A GO:0002181 ... P0A7P5 N/A
    906571 8w2n:e (3.2) BS01 rna N/A GO:0002181 ... P0A7Q1 N/A
    906572 8w2n:f (3.2) BS01 rna N/A GO:0002181 ... P0A7Q6 N/A
    906573 8w2n:g (3.2) BS01 rna N/A GO:0000028 ... P0A7V0 N/A
    906574 8w2n:h (3.2) BS01 rna N/A GO:0000028 ... P0A7V3 N/A
    906575 8w2n:i (3.2) BS01 rna N/A GO:0000028 ... P0A7V8 N/A
    906576 8w2n:i (3.2) BS02 MG N/A GO:0000028 ... P0A7V8 N/A
    906577 8w2n:j (3.2) BS01 rna N/A GO:0000028 ... P0A7W1 N/A
    906578 8w2n:k (3.2) BS01 rna N/A GO:0002181 ... P02358 N/A
    906579 8w2n:l (3.2) BS01 rna N/A GO:0000028 ... P02359 N/A
    906580 8w2n:l (3.2) BS02 rna N/A GO:0000028 ... P02359 N/A
    906581 8w2n:m (3.2) BS01 rna N/A GO:0003735 ... N/A N/A
    906582 8w2n:n (3.2) BS01 rna N/A GO:0002181 ... P0A7X3 N/A
    906583 8w2n:n (3.2) BS02 rna N/A GO:0002181 ... P0A7X3 N/A
    906584 8w2n:o (3.2) BS01 rna N/A GO:0003723 ... N/A N/A
    906585 8w2n:p (3.2) BS01 rna N/A GO:0002181 ... P0A7R9 N/A
    906586 8w2n:q (3.2) BS01 rna N/A GO:0000049 ... P0A7S3 N/A
    906587 8w2n:r (3.2) BS01 rna N/A GO:0000049 ... P0A7S9 N/A
    906588 8w2n:r (3.2) BS02 rna N/A GO:0000049 ... P0A7S9 N/A
    906589 8w2n:s (3.2) BS01 rna N/A GO:0000028 ... P0AG59 N/A
    906590 8w2n:t (3.2) BS01 rna N/A GO:0000028 ... P0ADZ4 N/A
    906591 8w2n:t (3.2) BS02 rna N/A GO:0000028 ... P0ADZ4 N/A
    906592 8w2n:u (3.2) BS01 rna N/A GO:0000028 ... P0A7T3 N/A
    906593 8w2n:v (3.2) BS01 rna N/A GO:0000028 ... P0AG63 N/A
    906594 8w2n:w (3.2) BS01 rna N/A GO:0002181 ... P0A7T7 N/A
    906595 8w2n:x (3.2) BS01 rna N/A GO:0003723 ... N/A N/A
    906596 8w2n:y (3.2) BS01 rna N/A GO:0000028 ... P0A7U7 N/A
    906597 8w2n:z (3.2) BS01 rna N/A GO:0000028 ... P68679 N/A
    906598 8w2o:A (3.49) BS01 rna ? GO:0000243 ... Q00916 38688558
    906599 8w2o:B (3.49) BS01 rna ? GO:0000243 ... Q05900 38688558
    906600 8w2o:B (3.49) BS02 rna ? GO:0000243 ... Q05900 38688558

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).