SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    906801 8w4b:A (2.152) BS01 STR N/A GO:0005635 ... Q6DCU6 38965213
    906802 8w4c:A (2.676) BS01 STR N/A GO:0005635 ... Q6DCU6 38965213
    906803 8w4g:A (2.15) BS01 CA N/A GO:0033925 ... A0AAT8XUJ0 38938812
    906804 8w4i:A (2.9) BS01 CA N/A GO:0033925 ... A0AAT8XUJ0 38938812
    906805 8w4l:A (3.1) BS01 GAL N/A N/A P0DOX5 38938812
    906806 8w4l:B (3.1) BS01 BMA N/A N/A P0DOX5 38938812
    906807 8w4l:B (3.1) BS02 GAL N/A N/A P0DOX5 38938812
    906808 8w4m:A (2.18) BS01 BMA N/A N/A P0DOX5 38938812
    906809 8w4m:A (2.18) BS02 GAL N/A N/A P0DOX5 38938812
    906810 8w4m:A (2.18) BS03 ZN N/A N/A P0DOX5 38938812
    906811 8w4m:A (2.18) BS04 ZN N/A N/A P0DOX5 38938812
    906812 8w4m:A (2.18) BS05 ZN N/A N/A P0DOX5 38938812
    906813 8w4m:A (2.18) BS06 ZN N/A N/A P0DOX5 38938812
    906814 8w4m:A (2.18) BS07 ZN N/A N/A P0DOX5 38938812
    906815 8w4n:A (3.1) BS01 BMA N/A GO:0033925 ... A0AAT8XUJ0 38938812
    906816 8w4n:A (3.1) BS02 MAN N/A GO:0033925 ... A0AAT8XUJ0 38938812
    906817 8w4n:A (3.1) BS03 CA N/A GO:0033925 ... A0AAT8XUJ0 38938812
    906818 8w4o:5 (3.23) BS01 ET4 ? GO:0009416 ... B5YLU3 38071196
    906819 8w4o:5 (3.23) BS02 A86 ? GO:0009416 ... B5YLU3 38071196
    906820 8w4o:5 (3.23) BS03 CLA ? GO:0009416 ... B5YLU3 38071196
    906821 8w4o:5 (3.23) BS04 CLA ? GO:0009416 ... B5YLU3 38071196
    906822 8w4o:5 (3.23) BS05 CLA ? GO:0009416 ... B5YLU3 38071196
    906823 8w4o:5 (3.23) BS06 CLA ? GO:0009416 ... B5YLU3 38071196
    906824 8w4o:5 (3.23) BS07 CLA ? GO:0009416 ... B5YLU3 38071196
    906825 8w4o:5 (3.23) BS08 CLA ? GO:0009416 ... B5YLU3 38071196
    906826 8w4o:5 (3.23) BS09 CLA ? GO:0009416 ... B5YLU3 38071196
    906827 8w4o:5 (3.23) BS10 CLA ? GO:0009416 ... B5YLU3 38071196
    906828 8w4o:5 (3.23) BS11 CLA ? GO:0009416 ... B5YLU3 38071196
    906829 8w4o:6 (3.23) BS01 CLA ? GO:0009416 ... B8BX93 38071196
    906830 8w4o:6 (3.23) BS02 CLA ? GO:0009416 ... B8BX93 38071196
    906831 8w4o:6 (3.23) BS03 A86 ? GO:0009416 ... B8BX93 38071196
    906832 8w4o:6 (3.23) BS04 DD6 ? GO:0009416 ... B8BX93 38071196
    906833 8w4o:6 (3.23) BS05 DD6 ? GO:0009416 ... B8BX93 38071196
    906834 8w4o:6 (3.23) BS06 CLA ? GO:0009416 ... B8BX93 38071196
    906835 8w4o:6 (3.23) BS07 CLA ? GO:0009416 ... B8BX93 38071196
    906836 8w4o:6 (3.23) BS08 CLA ? GO:0009416 ... B8BX93 38071196
    906837 8w4o:6 (3.23) BS09 CLA ? GO:0009416 ... B8BX93 38071196
    906838 8w4o:6 (3.23) BS10 CLA ? GO:0009416 ... B8BX93 38071196
    906839 8w4o:6 (3.23) BS11 CLA ? GO:0009416 ... B8BX93 38071196
    906840 8w4o:6 (3.23) BS12 CLA ? GO:0009416 ... B8BX93 38071196
    906841 8w4o:6 (3.23) BS13 CLA ? GO:0009416 ... B8BX93 38071196
    906842 8w4o:6 (3.23) BS14 CLA ? GO:0009416 ... B8BX93 38071196
    906843 8w4o:6 (3.23) BS15 CLA ? GO:0009416 ... B8BX93 38071196
    906844 8w4o:6 (3.23) BS16 CLA ? GO:0009416 ... B8BX93 38071196
    906845 8w4o:6 (3.23) BS17 CLA ? GO:0009416 ... B8BX93 38071196
    906846 8w4o:7 (3.23) BS01 A86 N/A GO:0009765 ... N/A 38071196
    906847 8w4o:7 (3.23) BS02 A86 N/A GO:0009765 ... N/A 38071196
    906848 8w4o:7 (3.23) BS03 DD6 N/A GO:0009765 ... N/A 38071196
    906849 8w4o:7 (3.23) BS04 DD6 N/A GO:0009765 ... N/A 38071196
    906850 8w4o:7 (3.23) BS05 CLA N/A GO:0009765 ... N/A 38071196
    906851 8w4o:7 (3.23) BS06 CLA N/A GO:0009765 ... N/A 38071196
    906852 8w4o:7 (3.23) BS07 CLA N/A GO:0009765 ... N/A 38071196
    906853 8w4o:7 (3.23) BS08 CLA N/A GO:0009765 ... N/A 38071196
    906854 8w4o:7 (3.23) BS09 CLA N/A GO:0009765 ... N/A 38071196
    906855 8w4o:7 (3.23) BS10 CLA N/A GO:0009765 ... N/A 38071196
    906856 8w4o:7 (3.23) BS11 CLA N/A GO:0009765 ... N/A 38071196
    906857 8w4o:7 (3.23) BS12 CLA N/A GO:0009765 ... N/A 38071196
    906858 8w4o:7 (3.23) BS13 CLA N/A GO:0009765 ... N/A 38071196
    906859 8w4o:7 (3.23) BS14 CLA N/A GO:0009765 ... N/A 38071196
    906860 8w4o:7 (3.23) BS15 CLA N/A GO:0009765 ... N/A 38071196
    906861 8w4o:7 (3.23) BS16 CLA N/A GO:0009765 ... N/A 38071196
    906862 8w4o:7 (3.23) BS17 CLA N/A GO:0009765 ... N/A 38071196
    906863 8w4o:7 (3.23) BS18 CLA N/A GO:0009765 ... N/A 38071196
    906864 8w4p:3 (3.48) BS01 A86 ? GO:0009416 ... B8BVI1 38071196
    906865 8w4p:3 (3.48) BS02 DD6 ? GO:0009416 ... B8BVI1 38071196
    906866 8w4p:3 (3.48) BS03 CLA ? GO:0009416 ... B8BVI1 38071196
    906867 8w4p:3 (3.48) BS04 CLA ? GO:0009416 ... B8BVI1 38071196
    906868 8w4p:3 (3.48) BS05 CLA ? GO:0009416 ... B8BVI1 38071196
    906869 8w4p:3 (3.48) BS06 CLA ? GO:0009416 ... B8BVI1 38071196
    906870 8w4p:3 (3.48) BS07 CLA ? GO:0009416 ... B8BVI1 38071196
    906871 8w4p:3 (3.48) BS08 CLA ? GO:0009416 ... B8BVI1 38071196
    906872 8w4p:3 (3.48) BS09 CLA ? GO:0009416 ... B8BVI1 38071196
    906873 8w4p:3 (3.48) BS10 CLA ? GO:0009416 ... B8BVI1 38071196
    906874 8w4p:3 (3.48) BS11 CLA ? GO:0009416 ... B8BVI1 38071196
    906875 8w4p:4 (3.48) BS01 A86 N/A N/A N/A 38071196
    906876 8w4p:4 (3.48) BS02 A86 N/A N/A N/A 38071196
    906877 8w4p:4 (3.48) BS03 CLA N/A N/A N/A 38071196
    906878 8w4p:4 (3.48) BS04 CLA N/A N/A N/A 38071196
    906879 8w4p:4 (3.48) BS05 CLA N/A N/A N/A 38071196
    906880 8w4p:4 (3.48) BS06 CLA N/A N/A N/A 38071196
    906881 8w4p:4 (3.48) BS07 CLA N/A N/A N/A 38071196
    906882 8w4p:4 (3.48) BS08 CLA N/A N/A N/A 38071196
    906883 8w4p:4 (3.48) BS09 CLA N/A N/A N/A 38071196
    906884 8w4p:p (3.48) BS01 CLA ? GO:0009416 ... B8BUU4 38071196
    906885 8w4p:p (3.48) BS02 CLA ? GO:0009416 ... B8BUU4 38071196
    906886 8w4p:p (3.48) BS03 CLA ? GO:0009416 ... B8BUU4 38071196
    906887 8w4p:p (3.48) BS04 CLA ? GO:0009416 ... B8BUU4 38071196
    906888 8w4p:p (3.48) BS05 CLA ? GO:0009416 ... B8BUU4 38071196
    906889 8w4p:p (3.48) BS06 CLA ? GO:0009416 ... B8BUU4 38071196
    906890 8w4p:p (3.48) BS07 CLA ? GO:0009416 ... B8BUU4 38071196
    906891 8w4p:p (3.48) BS08 CLA ? GO:0009416 ... B8BUU4 38071196
    906892 8w4p:p (3.48) BS09 A86 ? GO:0009416 ... B8BUU4 38071196
    906893 8w4p:p (3.48) BS10 DD6 ? GO:0009416 ... B8BUU4 38071196
    906894 8w4q:A (1.55) BS01 ZN 3.1.4.53 GO:0004114 ... Q08499 37918035
    906895 8w4q:A (1.55) BS02 3NG 3.1.4.53 GO:0004114 ... Q08499 37918035
    906896 8w4q:B (1.55) BS01 ZN 3.1.4.53 GO:0004114 ... Q08499 37918035
    906897 8w4q:B (1.55) BS02 3NG 3.1.4.53 GO:0004114 ... Q08499 37918035
    906898 8w4r:A (1.37) BS01 AJR 3.1.4.53 GO:0004114 ... Q08499 37918035
    906899 8w4r:A (1.37) BS02 ZN 3.1.4.53 GO:0004114 ... Q08499 37918035
    906900 8w4r:B (1.37) BS01 AJR 3.1.4.53 GO:0004114 ... Q08499 37918035
    906901 8w4r:B (1.37) BS02 ZN 3.1.4.53 GO:0004114 ... Q08499 37918035
    906902 8w4s:A (1.848) BS01 ZN 3.1.4.35 GO:0004114 ... O76074 37918035
    906903 8w4s:A (1.848) BS02 AJR 3.1.4.35 GO:0004114 ... O76074 37918035
    906904 8w4t:A (2.199) BS01 ZN 3.1.4.35 GO:0004114 ... O76074 37918035
    906905 8w4t:A (2.199) BS02 VZF 3.1.4.35 GO:0004114 ... O76074 37918035
    906906 8w4u:A (3.3) BS01 9MF ? GO:0005216 ... O43526 37857637
    906907 8w4u:A (3.3) BS02 PIO ? GO:0005216 ... O43526 37857637
    906908 8w4u:B (3.3) BS01 9MF ? GO:0005216 ... O43526 37857637
    906909 8w4u:B (3.3) BS02 PIO ? GO:0005216 ... O43526 37857637
    906910 8w4u:D (3.3) BS01 9MF ? GO:0005216 ... O43526 37857637
    906911 8w4u:D (3.3) BS02 PIO ? GO:0005216 ... O43526 37857637
    906912 8w4u:G (3.3) BS01 9MF ? GO:0005216 ... O43526 37857637
    906913 8w4u:G (3.3) BS02 PIO ? GO:0005216 ... O43526 37857637
    906914 8w4v:A (1.81) BS01 Q9O 3.6.4.10 GO:0005524 ... P07900 38665669
    906915 8w4x:A (1.4) BS01 GLC N/A N/A H3K419 N/A
    906916 8w4x:A (1.4) BS02 BGC N/A N/A H3K419 N/A
    906917 8w4x:A (1.4) BS03 BGC N/A N/A H3K419 N/A
    906918 8w4z:A (1.8) BS01 GLC N/A N/A H3K419 N/A
    906919 8w4z:A (1.8) BS02 BGC N/A N/A H3K419 N/A
    906920 8w4z:A (1.8) BS03 BGC N/A N/A H3K419 N/A
    906921 8w51:0 (2.4) BS01 rna N/A GO:0000027 ... P0AG51 N/A
    906922 8w51:1 (2.4) BS01 rna N/A GO:0000027 ... P0A7N4 N/A
    906923 8w51:2 (2.4) BS01 rna N/A GO:0000027 ... P0A7N9 N/A
    906924 8w51:3 (2.4) BS01 rna N/A GO:0002181 ... P0A7P5 N/A
    906925 8w51:4 (2.4) BS01 rna N/A GO:0002181 ... P0A7Q1 N/A
    906926 8w51:5 (2.4) BS01 rna N/A GO:0002181 ... P0A7Q6 N/A
    906927 8w51:5 (2.4) BS02 ZN N/A GO:0002181 ... P0A7Q6 N/A
    906928 8w51:C (2.4) BS01 rna N/A GO:0000027 ... P60422 N/A
    906929 8w51:D (2.4) BS01 rna N/A GO:0000027 ... P60438 N/A
    906930 8w51:E (2.4) BS01 rna N/A GO:0001070 ... P60723 N/A
    906931 8w51:F (2.4) BS01 rna N/A GO:0000027 ... P62399 N/A
    906932 8w51:F (2.4) BS02 rna N/A GO:0000027 ... P62399 N/A
    906933 8w51:G (2.4) BS01 rna N/A GO:0000027 ... P0AG55 N/A
    906934 8w51:H (2.4) BS01 rna N/A GO:0002181 ... P0A7R1 N/A
    906935 8w51:J (2.4) BS01 rna N/A GO:0000027 ... P0A7J7 N/A
    906936 8w51:K (2.4) BS01 rna N/A GO:0002181 ... P0AA10 N/A
    906937 8w51:L (2.4) BS01 rna N/A GO:0002181 ... P0ADY3 N/A
    906938 8w51:M (2.4) BS01 rna N/A GO:0002181 ... P02413 N/A
    906939 8w51:N (2.4) BS01 rna N/A GO:0000027 ... P0ADY7 N/A
    906940 8w51:N (2.4) BS02 rna N/A GO:0000027 ... P0ADY7 N/A
    906941 8w51:O (2.4) BS01 rna N/A GO:0000027 ... P0AG44 N/A
    906942 8w51:P (2.4) BS01 rna N/A GO:0002181 ... P0C018 N/A
    906943 8w51:P (2.4) BS02 rna N/A GO:0002181 ... P0C018 N/A
    906944 8w51:Q (2.4) BS01 rna N/A GO:0000027 ... P0A7K6 N/A
    906945 8w51:R (2.4) BS01 rna N/A GO:0000027 ... P0A7L3 N/A
    906946 8w51:S (2.4) BS01 rna N/A GO:0002181 ... P0AG48 N/A
    906947 8w51:T (2.4) BS01 rna N/A GO:0002181 ... P61175 N/A
    906948 8w51:U (2.4) BS01 rna N/A GO:0000027 ... P0ADZ0 N/A
    906949 8w51:V (2.4) BS01 rna N/A GO:0000027 ... P60624 N/A
    906950 8w51:W (2.4) BS01 rna N/A GO:0000027 ... P68919 N/A
    906951 8w51:W (2.4) BS02 rna N/A GO:0000027 ... P68919 N/A
    906952 8w51:X (2.4) BS01 rna N/A GO:0000027 ... P0A7L8 N/A
    906953 8w51:X (2.4) BS02 rna N/A GO:0000027 ... P0A7L8 N/A
    906954 8w51:Y (2.4) BS01 rna N/A GO:0000027 ... P0A7M2 N/A
    906955 8w51:Z (2.4) BS01 rna N/A GO:0000027 ... P0A7M6 N/A
    906956 8w53:A (2.42816) BS01 UDP 2.4.1.- GO:0008194 ... B6EWZ1 38816433
    906957 8w53:B (2.42816) BS01 UDP 2.4.1.- GO:0008194 ... B6EWZ1 38816433
    906958 8w59:A (1.339) BS01 ZN 2.3.2.27 N/A P98170 N/A
    906959 8w59:A (1.339) BS02 ZN 2.3.2.27 N/A P98170 N/A
    906960 8w59:B (1.339) BS01 ZN 2.3.2.27 N/A P98170 N/A
    906961 8w59:B (1.339) BS02 ZN 2.3.2.27 N/A P98170 N/A
    906962 8w5a:A (1.65) BS01 ZN 2.3.2.27 N/A P98170 N/A
    906963 8w5a:A (1.65) BS02 ZN 2.3.2.27 N/A P98170 N/A
    906964 8w5a:B (1.65) BS01 ZN 2.3.2.27 N/A P98170 N/A
    906965 8w5a:B (1.65) BS02 ZN 2.3.2.27 N/A P98170 N/A
    906966 8w5c:A (2.3) BS01 VZO N/A GO:0004672 ... P22455 38348819
    906967 8w5c:B (2.3) BS01 VZO N/A GO:0004672 ... P22455 38348819
    906968 8w5k:F (3.6) BS01 46E ? GO:0005515 ... P23644 38360717
    906969 8w5k:I (3.6) BS01 46E ? GO:0005515 ... P23644 38360717
    906970 8w5s:A (2.1162) BS01 CA N/A GO:0005509 ... P20073 N/A
    906971 8w5s:A (2.1162) BS02 CA N/A GO:0005509 ... P20073 N/A
    906972 8w5s:A (2.1162) BS03 CA N/A GO:0005509 ... P20073 N/A
    906973 8w5s:A (2.1162) BS04 CA N/A GO:0005509 ... P20073 N/A
    906974 8w5s:A (2.1162) BS05 CA N/A GO:0005509 ... P20073 N/A
    906975 8w5s:A (2.1162) BS06 CA N/A GO:0005509 ... P20073 N/A
    906976 8w5s:A (2.1162) BS07 CA N/A GO:0005509 ... P20073 N/A
    906977 8w5s:B (2.1162) BS01 CA N/A GO:0005509 ... P20073 N/A
    906978 8w5s:B (2.1162) BS02 CA N/A GO:0005509 ... P20073 N/A
    906979 8w5s:B (2.1162) BS03 CA N/A GO:0005509 ... P20073 N/A
    906980 8w5s:B (2.1162) BS04 CA N/A GO:0005509 ... P20073 N/A
    906981 8w5s:B (2.1162) BS05 CA N/A GO:0005509 ... P20073 N/A
    906982 8w5s:B (2.1162) BS06 CA N/A GO:0005509 ... P20073 N/A
    906983 8w5s:B (2.1162) BS07 CA N/A GO:0005509 ... P20073 N/A
    906984 8w5s:B (2.1162) BS08 CA N/A GO:0005509 ... P20073 N/A
    906985 8w5s:C (2.1162) BS01 CA N/A GO:0005509 ... P20073 N/A
    906986 8w5s:C (2.1162) BS02 CA N/A GO:0005509 ... P20073 N/A
    906987 8w5s:C (2.1162) BS03 CA N/A GO:0005509 ... P20073 N/A
    906988 8w5s:C (2.1162) BS04 CA N/A GO:0005509 ... P20073 N/A
    906989 8w5s:C (2.1162) BS05 CA N/A GO:0005509 ... P20073 N/A
    906990 8w5s:C (2.1162) BS06 CA N/A GO:0005509 ... P20073 N/A
    906991 8w5s:C (2.1162) BS07 CA N/A GO:0005509 ... P20073 N/A
    906992 8w5s:C (2.1162) BS08 CA N/A GO:0005509 ... P20073 N/A
    906993 8w5s:C (2.1162) BS09 CA N/A GO:0005509 ... P20073 N/A
    906994 8w5s:C (2.1162) BS10 CA N/A GO:0005509 ... P20073 N/A
    906995 8w5s:C (2.1162) BS11 CA N/A GO:0005509 ... P20073 N/A
    906996 8w5z:A (1.55) BS01 peptide 2.8.2.20 GO:0006478 ... B7Q097 38354785
    906997 8w5z:A (1.55) BS02 A3P 2.8.2.20 GO:0006478 ... B7Q097 38354785
    906998 8w5z:A (1.55) BS03 1PS 2.8.2.20 GO:0006478 ... B7Q097 38354785
    906999 8w5z:A (1.55) BS04 1PS 2.8.2.20 GO:0006478 ... B7Q097 38354785
    907000 8w5z:A (1.55) BS05 1PS 2.8.2.20 GO:0006478 ... B7Q097 38354785

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).