SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    907401 8w9e:f (3.6) BS01 dna ? GO:0000781 ... P62805 38598631
    907402 8w9e:f (3.6) BS02 dna ? GO:0000781 ... P62805 38598631
    907403 8w9e:g (3.6) BS01 dna ? GO:0000786 ... P04908 38598631
    907404 8w9e:g (3.6) BS02 dna ? GO:0000786 ... P04908 38598631
    907405 8w9e:h (3.6) BS01 dna ? GO:0000786 ... O60814 38598631
    907406 8w9f:B (4.4) BS01 ZN 3.5.1.98 GO:0000082 ... P32561 38598631
    907407 8w9f:E (4.4) BS01 ZN ? GO:0000118 ... Q04779 38598631
    907408 8w9f:E (4.4) BS02 ZN ? GO:0000118 ... Q04779 38598631
    907409 8w9f:E (4.4) BS03 ZN ? GO:0000118 ... Q04779 38598631
    907410 8w9f:F (4.4) BS01 ZN ? GO:0000118 ... Q04779 38598631
    907411 8w9f:F (4.4) BS02 ZN ? GO:0000118 ... Q04779 38598631
    907412 8w9f:G (4.4) BS01 dna ? GO:0000122 ... Q12432 38598631
    907413 8w9f:a (4.4) BS01 dna ? GO:0000786 ... P68431 38598631
    907414 8w9f:a (4.4) BS02 dna ? GO:0000786 ... P68431 38598631
    907415 8w9f:b (4.4) BS01 dna ? GO:0000781 ... P62805 38598631
    907416 8w9f:b (4.4) BS02 dna ? GO:0000781 ... P62805 38598631
    907417 8w9f:c (4.4) BS01 dna ? GO:0000786 ... P04908 38598631
    907418 8w9f:c (4.4) BS02 dna ? GO:0000786 ... P04908 38598631
    907419 8w9f:d (4.4) BS01 dna ? GO:0000786 ... O60814 38598631
    907420 8w9f:d (4.4) BS02 dna ? GO:0000786 ... O60814 38598631
    907421 8w9f:e (4.4) BS01 dna ? GO:0000786 ... P68431 38598631
    907422 8w9f:e (4.4) BS02 dna ? GO:0000786 ... P68431 38598631
    907423 8w9f:f (4.4) BS01 dna ? GO:0000781 ... P62805 38598631
    907424 8w9f:f (4.4) BS02 dna ? GO:0000781 ... P62805 38598631
    907425 8w9f:g (4.4) BS01 dna ? GO:0000786 ... P04908 38598631
    907426 8w9f:g (4.4) BS02 dna ? GO:0000786 ... P04908 38598631
    907427 8w9f:h (4.4) BS01 dna ? GO:0000786 ... O60814 38598631
    907428 8w9f:h (4.4) BS02 dna ? GO:0000786 ... O60814 38598631
    907429 8w9g:A (2.6) BS01 5PT N/A GO:0005198 ... P03147 N/A
    907430 8w9g:A (2.6) BS02 5PT N/A GO:0005198 ... P03147 N/A
    907431 8w9g:B (2.6) BS01 5PT N/A GO:0005198 ... P03147 N/A
    907432 8w9g:C (2.6) BS01 5PT N/A GO:0005198 ... P03147 N/A
    907433 8w9g:C (2.6) BS02 5PT N/A GO:0005198 ... P03147 N/A
    907434 8w9g:D (2.6) BS01 5PT N/A GO:0005198 ... P03147 N/A
    907435 8w9g:E (2.6) BS01 5PT N/A GO:0005198 ... P03147 N/A
    907436 8w9g:E (2.6) BS02 5PT N/A GO:0005198 ... P03147 N/A
    907437 8w9g:F (2.6) BS01 5PT N/A GO:0005198 ... P03147 N/A
    907438 8w9i:A (2.45) BS01 W2H N/A GO:0000166 ... Q9I502 40253792
    907439 8w9i:A (2.45) BS02 MG N/A GO:0000166 ... Q9I502 40253792
    907440 8w9i:B (2.45) BS01 W2H N/A GO:0000166 ... Q9I502 40253792
    907441 8w9i:B (2.45) BS02 MG N/A GO:0000166 ... Q9I502 40253792
    907442 8w9i:B (2.45) BS03 MG N/A GO:0000166 ... Q9I502 40253792
    907443 8w9m:C (3.1) BS01 ATP ? GO:0005524 ... A0ACD6B947 38457518
    907444 8w9m:C (3.1) BS02 MG ? GO:0005524 ... A0ACD6B947 38457518
    907445 8w9m:C (3.1) BS03 ATP ? GO:0005524 ... A0ACD6B947 38457518
    907446 8w9m:D (3.1) BS01 ATP ? GO:0005524 ... A0ACD6B948 38457518
    907447 8w9m:D (3.1) BS02 ATP ? GO:0005524 ... A0ACD6B948 38457518
    907448 8w9m:D (3.1) BS03 MG ? GO:0005524 ... A0ACD6B948 38457518
    907449 8w9o:A (2.8) BS01 K ? GO:0005739 ... Q84TI7 38335958
    907450 8w9o:A (2.8) BS02 K ? GO:0005739 ... Q84TI7 38335958
    907451 8w9o:B (2.8) BS01 K ? GO:0005739 ... Q84TI7 38335958
    907452 8w9o:B (2.8) BS02 K ? GO:0005739 ... Q84TI7 38335958
    907453 8w9p:R (5.7) BS01 peptide ? N/A B4Y048 38480794
    907454 8w9p:S (5.7) BS01 peptide ? N/A B4Y048 38480794
    907455 8w9p:T (5.7) BS01 peptide ? N/A B4Y048 38480794
    907456 8w9p:U (5.7) BS01 peptide ? N/A B4Y048 38480794
    907457 8w9p:V (5.7) BS01 peptide ? N/A B4Y048 38480794
    907458 8w9p:V (5.7) BS02 peptide ? N/A B4Y048 38480794
    907459 8w9p:W (5.7) BS01 peptide ? N/A B4Y048 38480794
    907460 8w9q:R (5.7) BS01 peptide ? N/A B4Y048 38480794
    907461 8w9q:S (5.7) BS01 peptide ? N/A B4Y048 38480794
    907462 8w9q:S (5.7) BS02 peptide ? N/A B4Y048 38480794
    907463 8w9q:T (5.7) BS01 peptide ? N/A B4Y048 38480794
    907464 8w9s:A (2.09) BS01 NAD N/A GO:0000166 ... O52541 N/A
    907465 8w9s:A (2.09) BS02 US6 N/A GO:0000166 ... O52541 N/A
    907466 8w9s:C (2.09) BS01 US6 N/A GO:0000166 ... O52541 N/A
    907467 8w9u:A (1.85) BS01 SAH N/A GO:0001510 ... O31590 40794868
    907468 8w9u:B (1.85) BS01 SAH N/A GO:0001510 ... O31590 40794868
    907469 8w9v:A (2.9) BS01 K ? GO:0005886 ... A0A3B6RK40 38335958
    907470 8w9v:A (2.9) BS02 K ? GO:0005886 ... A0A3B6RK40 38335958
    907471 8w9v:A (2.9) BS03 K ? GO:0005886 ... A0A3B6RK40 38335958
    907472 8w9v:B (2.9) BS01 K ? GO:0005886 ... A0A3B6RK40 38335958
    907473 8w9v:B (2.9) BS02 K ? GO:0005886 ... A0A3B6RK40 38335958
    907474 8w9v:B (2.9) BS03 K ? GO:0005886 ... A0A3B6RK40 38335958
    907475 8w9w:A (3.74) BS01 UJO 2.7.8.- GO:0016780 ... Q96LT4 38388831
    907476 8w9w:A (3.74) BS02 OPE 2.7.8.- GO:0016780 ... Q96LT4 38388831
    907477 8w9w:B (3.74) BS01 UJO 2.7.8.- GO:0016780 ... Q96LT4 38388831
    907478 8w9w:B (3.74) BS02 OPE 2.7.8.- GO:0016780 ... Q96LT4 38388831
    907479 8w9w:C (3.74) BS01 UJO 2.7.8.- GO:0016780 ... Q96LT4 38388831
    907480 8w9w:C (3.74) BS02 OPE 2.7.8.- GO:0016780 ... Q96LT4 38388831
    907481 8w9w:D (3.74) BS01 UJO 2.7.8.- GO:0016780 ... Q96LT4 38388831
    907482 8w9w:E (3.74) BS01 UJO 2.7.8.- GO:0016780 ... Q96LT4 38388831
    907483 8w9w:F (3.74) BS01 UJO 2.7.8.- GO:0016780 ... Q96LT4 38388831
    907484 8w9w:F (3.74) BS02 OPE 2.7.8.- GO:0016780 ... Q96LT4 38388831
    907485 8w9z:B (3.0) BS01 ZN 2.7.7.6 GO:0003677 ... P06271 38428393
    907486 8w9z:C (3.0) BS01 MG 2.7.7.6 GO:0000287 ... A0A140G1Q3 38428393
    907487 8w9z:G (3.0) BS01 FE 1.15.1.1 GO:0004784 ... A0A1S4CKK0 38428393
    907488 8w9z:L (3.0) BS01 FE 1.15.1.1 GO:0004784 ... A0A1S4CIZ9 38428393
    907489 8wa0:B (2.7) BS01 dna 2.7.7.6 GO:0003677 ... P06271 38428393
    907490 8wa0:B (2.7) BS02 rna 2.7.7.6 GO:0003677 ... P06271 38428393
    907491 8wa0:B (2.7) BS03 ZN 2.7.7.6 GO:0003677 ... P06271 38428393
    907492 8wa0:C (2.7) BS01 dna 2.7.7.6 GO:0000287 ... A0A140G1Q3 38428393
    907493 8wa0:C (2.7) BS02 rna 2.7.7.6 GO:0000287 ... A0A140G1Q3 38428393
    907494 8wa0:C (2.7) BS03 MG 2.7.7.6 GO:0000287 ... A0A140G1Q3 38428393
    907495 8wa0:G (2.7) BS01 FE 1.15.1.1 GO:0004784 ... A0A1S4CKK0 38428393
    907496 8wa0:L (2.7) BS01 FE 1.15.1.1 GO:0004784 ... A0A1S4CIZ9 38428393
    907497 8wa1:B (2.8) BS01 dna 2.7.7.6 GO:0003677 ... P06271 38428393
    907498 8wa1:B (2.8) BS02 dna 2.7.7.6 GO:0003677 ... P06271 38428393
    907499 8wa1:B (2.8) BS03 rna 2.7.7.6 GO:0003677 ... P06271 38428393
    907500 8wa1:B (2.8) BS04 ZN 2.7.7.6 GO:0003677 ... P06271 38428393
    907501 8wa1:C (2.8) BS01 dna 2.7.7.6 GO:0000287 ... A0A140G1Q3 38428393
    907502 8wa1:C (2.8) BS02 rna 2.7.7.6 GO:0000287 ... A0A140G1Q3 38428393
    907503 8wa1:C (2.8) BS03 MG 2.7.7.6 GO:0000287 ... A0A140G1Q3 38428393
    907504 8wa1:G (2.8) BS01 FE 1.15.1.1 GO:0004784 ... A0A1S4CKK0 38428393
    907505 8wa1:L (2.8) BS01 FE 1.15.1.1 GO:0004784 ... A0A1S4CIZ9 38428393
    907506 8wa1:c (2.8) BS01 dna 2.7.7.6 GO:0003677 ... P38550 38428393
    907507 8wa2:A (3.0) BS01 FUB ? N/A A8J9H7 38552612
    907508 8wa2:A (3.0) BS02 FUB ? N/A A8J9H7 38552612
    907509 8wa2:A (3.0) BS03 FUB ? N/A A8J9H7 38552612
    907510 8wa2:A (3.0) BS04 GZL ? N/A A8J9H7 38552612
    907511 8wa2:A (3.0) BS05 FUB ? N/A A8J9H7 38552612
    907512 8wa2:A (3.0) BS06 FUB ? N/A A8J9H7 38552612
    907513 8wa2:A (3.0) BS07 GZL ? N/A A8J9H7 38552612
    907514 8wa2:A (3.0) BS08 FUB ? N/A A8J9H7 38552612
    907515 8wa2:A (3.0) BS09 FUB ? N/A A8J9H7 38552612
    907516 8wa2:A (3.0) BS10 FUB ? N/A A8J9H7 38552612
    907517 8wa2:A (3.0) BS11 FUB ? N/A A8J9H7 38552612
    907518 8wa2:A (3.0) BS12 FUB ? N/A A8J9H7 38552612
    907519 8wa2:A (3.0) BS13 FUB ? N/A A8J9H7 38552612
    907520 8wa2:A (3.0) BS14 FUB ? N/A A8J9H7 38552612
    907521 8wa2:A (3.0) BS15 FUB ? N/A A8J9H7 38552612
    907522 8wa2:A (3.0) BS16 FUB ? N/A A8J9H7 38552612
    907523 8wa2:A (3.0) BS17 FUB ? N/A A8J9H7 38552612
    907524 8wa2:A (3.0) BS18 FUB ? N/A A8J9H7 38552612
    907525 8wa2:A (3.0) BS19 FUB ? N/A A8J9H7 38552612
    907526 8wa2:A (3.0) BS20 FUB ? N/A A8J9H7 38552612
    907527 8wa2:A (3.0) BS21 FUB ? N/A A8J9H7 38552612
    907528 8wa2:A (3.0) BS22 FUB ? N/A A8J9H7 38552612
    907529 8wa2:A (3.0) BS23 FUB ? N/A A8J9H7 38552612
    907530 8wa2:A (3.0) BS24 BMA ? N/A A8J9H7 38552612
    907531 8wa2:A (3.0) BS25 MAN ? N/A A8J9H7 38552612
    907532 8wa2:A (3.0) BS26 FUB ? N/A A8J9H7 38552612
    907533 8wa2:A (3.0) BS27 GZL ? N/A A8J9H7 38552612
    907534 8wa2:A (3.0) BS28 AHR ? N/A A8J9H7 38552612
    907535 8wa2:A (3.0) BS29 AHR ? N/A A8J9H7 38552612
    907536 8wa2:A (3.0) BS30 AHR ? N/A A8J9H7 38552612
    907537 8wa2:A (3.0) BS31 CA ? N/A A8J9H7 38552612
    907538 8wa2:A (3.0) BS32 GLA ? N/A A8J9H7 38552612
    907539 8wa2:A (3.0) BS33 GLA ? N/A A8J9H7 38552612
    907540 8wa2:A (3.0) BS34 GLA ? N/A A8J9H7 38552612
    907541 8wa2:A (3.0) BS35 GLA ? N/A A8J9H7 38552612
    907542 8wa2:A (3.0) BS36 GLA ? N/A A8J9H7 38552612
    907543 8wa2:A (3.0) BS37 GLA ? N/A A8J9H7 38552612
    907544 8wa2:A (3.0) BS38 GLA ? N/A A8J9H7 38552612
    907545 8wa2:A (3.0) BS39 GLA ? N/A A8J9H7 38552612
    907546 8wa2:A (3.0) BS40 GLA ? N/A A8J9H7 38552612
    907547 8wa2:A (3.0) BS41 GLA ? N/A A8J9H7 38552612
    907548 8wa2:A (3.0) BS42 GLA ? N/A A8J9H7 38552612
    907549 8wa2:B (3.0) BS01 FUB ? N/A A8J9H7 38552612
    907550 8wa2:B (3.0) BS02 FUB ? N/A A8J9H7 38552612
    907551 8wa2:B (3.0) BS03 FUB ? N/A A8J9H7 38552612
    907552 8wa2:B (3.0) BS04 FUB ? N/A A8J9H7 38552612
    907553 8wa2:B (3.0) BS05 AHR ? N/A A8J9H7 38552612
    907554 8wa2:B (3.0) BS06 FUB ? N/A A8J9H7 38552612
    907555 8wa2:B (3.0) BS07 FUB ? N/A A8J9H7 38552612
    907556 8wa2:B (3.0) BS08 FUB ? N/A A8J9H7 38552612
    907557 8wa2:B (3.0) BS09 FUB ? N/A A8J9H7 38552612
    907558 8wa2:B (3.0) BS10 FUB ? N/A A8J9H7 38552612
    907559 8wa2:B (3.0) BS11 FUB ? N/A A8J9H7 38552612
    907560 8wa2:B (3.0) BS12 FUB ? N/A A8J9H7 38552612
    907561 8wa2:B (3.0) BS13 FUB ? N/A A8J9H7 38552612
    907562 8wa2:B (3.0) BS14 FUB ? N/A A8J9H7 38552612
    907563 8wa2:B (3.0) BS15 FUB ? N/A A8J9H7 38552612
    907564 8wa2:B (3.0) BS16 FUB ? N/A A8J9H7 38552612
    907565 8wa2:B (3.0) BS17 FUB ? N/A A8J9H7 38552612
    907566 8wa2:B (3.0) BS18 FUB ? N/A A8J9H7 38552612
    907567 8wa2:B (3.0) BS19 FUB ? N/A A8J9H7 38552612
    907568 8wa2:B (3.0) BS20 FUB ? N/A A8J9H7 38552612
    907569 8wa2:B (3.0) BS21 FUB ? N/A A8J9H7 38552612
    907570 8wa2:B (3.0) BS22 FUB ? N/A A8J9H7 38552612
    907571 8wa2:B (3.0) BS23 FUB ? N/A A8J9H7 38552612
    907572 8wa2:B (3.0) BS24 FUB ? N/A A8J9H7 38552612
    907573 8wa2:B (3.0) BS25 FUB ? N/A A8J9H7 38552612
    907574 8wa2:B (3.0) BS26 FUB ? N/A A8J9H7 38552612
    907575 8wa2:B (3.0) BS27 FUB ? N/A A8J9H7 38552612
    907576 8wa2:B (3.0) BS28 FUB ? N/A A8J9H7 38552612
    907577 8wa2:B (3.0) BS29 FUB ? N/A A8J9H7 38552612
    907578 8wa2:B (3.0) BS30 BMA ? N/A A8J9H7 38552612
    907579 8wa2:B (3.0) BS31 MAN ? N/A A8J9H7 38552612
    907580 8wa2:B (3.0) BS32 FUB ? N/A A8J9H7 38552612
    907581 8wa2:B (3.0) BS33 FUB ? N/A A8J9H7 38552612
    907582 8wa2:B (3.0) BS34 AHR ? N/A A8J9H7 38552612
    907583 8wa2:B (3.0) BS35 GZL ? N/A A8J9H7 38552612
    907584 8wa2:B (3.0) BS36 FUB ? N/A A8J9H7 38552612
    907585 8wa2:B (3.0) BS37 FUB ? N/A A8J9H7 38552612
    907586 8wa2:B (3.0) BS38 AHR ? N/A A8J9H7 38552612
    907587 8wa2:B (3.0) BS39 AHR ? N/A A8J9H7 38552612
    907588 8wa2:B (3.0) BS40 CA ? N/A A8J9H7 38552612
    907589 8wa2:B (3.0) BS41 GLA ? N/A A8J9H7 38552612
    907590 8wa2:B (3.0) BS42 GLA ? N/A A8J9H7 38552612
    907591 8wa2:B (3.0) BS43 GLA ? N/A A8J9H7 38552612
    907592 8wa2:B (3.0) BS44 GLA ? N/A A8J9H7 38552612
    907593 8wa2:B (3.0) BS45 GLA ? N/A A8J9H7 38552612
    907594 8wa2:B (3.0) BS46 GLA ? N/A A8J9H7 38552612
    907595 8wa2:B (3.0) BS47 GLA ? N/A A8J9H7 38552612
    907596 8wa2:B (3.0) BS48 GLA ? N/A A8J9H7 38552612
    907597 8wa2:B (3.0) BS49 GLA ? N/A A8J9H7 38552612
    907598 8wa2:B (3.0) BS50 GLA ? N/A A8J9H7 38552612
    907599 8wa2:B (3.0) BS51 GLA ? N/A A8J9H7 38552612
    907600 8wa2:C (3.0) BS01 FUB ? N/A A8J9H7 38552612

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).