SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    907801 8wak:7 (5.47) BS01 SF4 3.6.4.12 GO:0000439 ... P18074 38127763
    907802 8wak:P (5.47) BS01 dna ? GO:0000785 ... P20226 38127763
    907803 8wak:P (5.47) BS02 dna ? GO:0000785 ... P20226 38127763
    907804 8wak:Q (5.47) BS01 dna ? GO:0000979 ... P52655 38127763
    907805 8wak:R (5.47) BS01 dna 2.3.1.48 GO:0000776 ... Q00403 38127763
    907806 8wak:R (5.47) BS02 dna 2.3.1.48 GO:0000776 ... Q00403 38127763
    907807 8wak:R (5.47) BS03 ZN 2.3.1.48 GO:0000776 ... Q00403 38127763
    907808 8wak:T (5.47) BS01 dna 3.6.4.12 GO:0005515 ... P13984 38127763
    907809 8wak:U (5.47) BS01 ZN ? GO:0005515 ... P29083 38127763
    907810 8wak:o (5.47) BS01 peptide 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    907811 8wak:o (5.47) BS02 rna 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    907812 8wak:o (5.47) BS03 dna 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    907813 8wak:o (5.47) BS04 dna 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    907814 8wak:o (5.47) BS05 ZN 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    907815 8wak:o (5.47) BS06 ZN 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    907816 8wak:o (5.47) BS07 MG 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    907817 8wak:p (5.47) BS01 rna 2.7.7.6 GO:0001172 ... A0A4X1TVZ5 38127763
    907818 8wak:p (5.47) BS02 dna 2.7.7.6 GO:0001172 ... A0A4X1TVZ5 38127763
    907819 8wak:p (5.47) BS03 W0F 2.7.7.6 GO:0001172 ... A0A4X1TVZ5 38127763
    907820 8wak:p (5.47) BS04 ZN 2.7.7.6 GO:0001172 ... A0A4X1TVZ5 38127763
    907821 8wak:q (5.47) BS01 ZN ? GO:0003677 ... I3LCH3 38127763
    907822 8wak:s (5.47) BS01 dna ? GO:0003677 ... A0A4X1VTX4 38127763
    907823 8wak:w (5.47) BS01 ZN ? GO:0001193 ... P60899 38127763
    907824 8wak:w (5.47) BS02 ZN ? GO:0001193 ... P60899 38127763
    907825 8wak:x (5.47) BS01 ZN ? GO:0003677 ... A0A493TD97 38127763
    907826 8wak:z (5.47) BS01 ZN ? GO:0001650 ... A0A4X1TRS6 38127763
    907827 8wal:0 (8.52) BS01 ZN ? GO:0000082 ... P51948 38127763
    907828 8wal:2 (8.52) BS01 ZN ? GO:0000438 ... Q13888 38127763
    907829 8wal:2 (8.52) BS02 ZN ? GO:0000438 ... Q13888 38127763
    907830 8wal:2 (8.52) BS03 ZN ? GO:0000438 ... Q13888 38127763
    907831 8wal:3 (8.52) BS01 ZN ? GO:0000438 ... Q13889 38127763
    907832 8wal:3 (8.52) BS02 ZN ? GO:0000438 ... Q13889 38127763
    907833 8wal:6 (8.52) BS01 dna 5.6.2.4 GO:0000112 ... P19447 38127763
    907834 8wal:6 (8.52) BS02 dna 5.6.2.4 GO:0000112 ... P19447 38127763
    907835 8wal:7 (8.52) BS01 SF4 3.6.4.12 GO:0000439 ... P18074 38127763
    907836 8wal:P (8.52) BS01 dna ? GO:0000785 ... P20226 38127763
    907837 8wal:P (8.52) BS02 dna ? GO:0000785 ... P20226 38127763
    907838 8wal:Q (8.52) BS01 dna ? GO:0000979 ... P52655 38127763
    907839 8wal:R (8.52) BS01 dna 2.3.1.48 GO:0000776 ... Q00403 38127763
    907840 8wal:R (8.52) BS02 dna 2.3.1.48 GO:0000776 ... Q00403 38127763
    907841 8wal:R (8.52) BS03 ZN 2.3.1.48 GO:0000776 ... Q00403 38127763
    907842 8wal:T (8.52) BS01 dna 3.6.4.12 GO:0005515 ... P13984 38127763
    907843 8wal:U (8.52) BS01 ZN ? GO:0005515 ... P29083 38127763
    907844 8wal:o (8.52) BS01 peptide 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    907845 8wal:o (8.52) BS02 dna 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    907846 8wal:o (8.52) BS03 dna 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    907847 8wal:o (8.52) BS04 ZN 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    907848 8wal:o (8.52) BS05 ZN 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    907849 8wal:o (8.52) BS06 MG 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    907850 8wal:p (8.52) BS01 rna 2.7.7.6 GO:0001172 ... A0A4X1TVZ5 38127763
    907851 8wal:p (8.52) BS02 dna 2.7.7.6 GO:0001172 ... A0A4X1TVZ5 38127763
    907852 8wal:p (8.52) BS03 W0F 2.7.7.6 GO:0001172 ... A0A4X1TVZ5 38127763
    907853 8wal:p (8.52) BS04 ZN 2.7.7.6 GO:0001172 ... A0A4X1TVZ5 38127763
    907854 8wal:q (8.52) BS01 ZN ? GO:0003677 ... I3LCH3 38127763
    907855 8wal:s (8.52) BS01 dna ? GO:0003677 ... A0A4X1VTX4 38127763
    907856 8wal:w (8.52) BS01 ZN ? GO:0001193 ... P60899 38127763
    907857 8wal:w (8.52) BS02 ZN ? GO:0001193 ... P60899 38127763
    907858 8wal:x (8.52) BS01 ZN ? GO:0003677 ... A0A493TD97 38127763
    907859 8wal:z (8.52) BS01 ZN ? GO:0001650 ... A0A4X1TRS6 38127763
    907860 8wam:A (3.23) BS01 ATP ? GO:0005524 ... Q84TH5 38050355
    907861 8wam:A (3.23) BS02 MG ? GO:0005524 ... Q84TH5 38050355
    907862 8wam:A (3.23) BS03 ATP ? GO:0005524 ... Q84TH5 38050355
    907863 8wam:B (3.23) BS01 ATP ? GO:0005524 ... Q84TH5 38050355
    907864 8wam:B (3.23) BS02 ATP ? GO:0005524 ... Q84TH5 38050355
    907865 8wam:B (3.23) BS03 MG ? GO:0005524 ... Q84TH5 38050355
    907866 8wan:0 (6.07) BS01 ZN ? GO:0000082 ... P51948 38127763
    907867 8wan:2 (6.07) BS01 ZN ? GO:0000438 ... Q13888 38127763
    907868 8wan:2 (6.07) BS02 ZN ? GO:0000438 ... Q13888 38127763
    907869 8wan:2 (6.07) BS03 ZN ? GO:0000438 ... Q13888 38127763
    907870 8wan:3 (6.07) BS01 ZN ? GO:0000438 ... Q13889 38127763
    907871 8wan:3 (6.07) BS02 ZN ? GO:0000438 ... Q13889 38127763
    907872 8wan:6 (6.07) BS01 dna 5.6.2.4 GO:0000112 ... P19447 38127763
    907873 8wan:6 (6.07) BS02 dna 5.6.2.4 GO:0000112 ... P19447 38127763
    907874 8wan:7 (6.07) BS01 SF4 3.6.4.12 GO:0000439 ... P18074 38127763
    907875 8wan:P (6.07) BS01 dna ? GO:0000785 ... P20226 38127763
    907876 8wan:P (6.07) BS02 dna ? GO:0000785 ... P20226 38127763
    907877 8wan:Q (6.07) BS01 dna ? GO:0000979 ... P52655 38127763
    907878 8wan:R (6.07) BS01 dna 2.3.1.48 GO:0000776 ... Q00403 38127763
    907879 8wan:R (6.07) BS02 dna 2.3.1.48 GO:0000776 ... Q00403 38127763
    907880 8wan:R (6.07) BS03 ZN 2.3.1.48 GO:0000776 ... Q00403 38127763
    907881 8wan:T (6.07) BS01 dna 3.6.4.12 GO:0005515 ... P13984 38127763
    907882 8wan:U (6.07) BS01 ZN ? GO:0005515 ... P29083 38127763
    907883 8wan:o (6.07) BS01 peptide 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    907884 8wan:o (6.07) BS02 dna 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    907885 8wan:o (6.07) BS03 dna 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    907886 8wan:o (6.07) BS04 ZN 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    907887 8wan:o (6.07) BS05 ZN 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    907888 8wan:o (6.07) BS06 MG 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    907889 8wan:p (6.07) BS01 rna 2.7.7.6 GO:0001172 ... A0A4X1TVZ5 38127763
    907890 8wan:p (6.07) BS02 dna 2.7.7.6 GO:0001172 ... A0A4X1TVZ5 38127763
    907891 8wan:p (6.07) BS03 W0F 2.7.7.6 GO:0001172 ... A0A4X1TVZ5 38127763
    907892 8wan:p (6.07) BS04 ZN 2.7.7.6 GO:0001172 ... A0A4X1TVZ5 38127763
    907893 8wan:q (6.07) BS01 ZN ? GO:0003677 ... I3LCH3 38127763
    907894 8wan:s (6.07) BS01 dna ? GO:0003677 ... A0A4X1VTX4 38127763
    907895 8wan:w (6.07) BS01 ZN ? GO:0001193 ... P60899 38127763
    907896 8wan:w (6.07) BS02 ZN ? GO:0001193 ... P60899 38127763
    907897 8wan:x (6.07) BS01 ZN ? GO:0003677 ... A0A493TD97 38127763
    907898 8wan:z (6.07) BS01 ZN ? GO:0001650 ... A0A4X1TRS6 38127763
    907899 8wao:0 (6.4) BS01 ZN ? GO:0000082 ... P51948 38127763
    907900 8wao:2 (6.4) BS01 ZN ? GO:0000438 ... Q13888 38127763
    907901 8wao:2 (6.4) BS02 ZN ? GO:0000438 ... Q13888 38127763
    907902 8wao:2 (6.4) BS03 ZN ? GO:0000438 ... Q13888 38127763
    907903 8wao:3 (6.4) BS01 ZN ? GO:0000438 ... Q13889 38127763
    907904 8wao:3 (6.4) BS02 ZN ? GO:0000438 ... Q13889 38127763
    907905 8wao:6 (6.4) BS01 dna 5.6.2.4 GO:0000112 ... P19447 38127763
    907906 8wao:6 (6.4) BS02 dna 5.6.2.4 GO:0000112 ... P19447 38127763
    907907 8wao:7 (6.4) BS01 SF4 3.6.4.12 GO:0000439 ... P18074 38127763
    907908 8wao:P (6.4) BS01 dna ? GO:0000785 ... P20226 38127763
    907909 8wao:P (6.4) BS02 dna ? GO:0000785 ... P20226 38127763
    907910 8wao:Q (6.4) BS01 dna ? GO:0000979 ... P52655 38127763
    907911 8wao:R (6.4) BS01 dna 2.3.1.48 GO:0000776 ... Q00403 38127763
    907912 8wao:R (6.4) BS02 dna 2.3.1.48 GO:0000776 ... Q00403 38127763
    907913 8wao:R (6.4) BS03 ZN 2.3.1.48 GO:0000776 ... Q00403 38127763
    907914 8wao:T (6.4) BS01 dna 3.6.4.12 GO:0005515 ... P13984 38127763
    907915 8wao:U (6.4) BS01 ZN ? GO:0005515 ... P29083 38127763
    907916 8wao:o (6.4) BS01 peptide 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    907917 8wao:o (6.4) BS02 rna 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    907918 8wao:o (6.4) BS03 dna 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    907919 8wao:o (6.4) BS04 dna 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    907920 8wao:o (6.4) BS05 ZN 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    907921 8wao:o (6.4) BS06 ZN 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    907922 8wao:o (6.4) BS07 MG 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    907923 8wao:p (6.4) BS01 rna 2.7.7.6 GO:0001172 ... A0A4X1TVZ5 38127763
    907924 8wao:p (6.4) BS02 dna 2.7.7.6 GO:0001172 ... A0A4X1TVZ5 38127763
    907925 8wao:p (6.4) BS03 W0F 2.7.7.6 GO:0001172 ... A0A4X1TVZ5 38127763
    907926 8wao:p (6.4) BS04 ZN 2.7.7.6 GO:0001172 ... A0A4X1TVZ5 38127763
    907927 8wao:q (6.4) BS01 ZN ? GO:0003677 ... I3LCH3 38127763
    907928 8wao:s (6.4) BS01 dna ? GO:0003677 ... A0A4X1VTX4 38127763
    907929 8wao:w (6.4) BS01 ZN ? GO:0001193 ... P60899 38127763
    907930 8wao:w (6.4) BS02 ZN ? GO:0001193 ... P60899 38127763
    907931 8wao:x (6.4) BS01 ZN ? GO:0003677 ... A0A493TD97 38127763
    907932 8wao:z (6.4) BS01 ZN ? GO:0001650 ... A0A4X1TRS6 38127763
    907933 8wap:0 (5.85) BS01 ZN ? GO:0000082 ... P51948 38127763
    907934 8wap:2 (5.85) BS01 ZN ? GO:0000438 ... Q13888 38127763
    907935 8wap:2 (5.85) BS02 ZN ? GO:0000438 ... Q13888 38127763
    907936 8wap:2 (5.85) BS03 ZN ? GO:0000438 ... Q13888 38127763
    907937 8wap:3 (5.85) BS01 ZN ? GO:0000438 ... Q13889 38127763
    907938 8wap:3 (5.85) BS02 ZN ? GO:0000438 ... Q13889 38127763
    907939 8wap:6 (5.85) BS01 dna 5.6.2.4 GO:0000112 ... P19447 38127763
    907940 8wap:6 (5.85) BS02 dna 5.6.2.4 GO:0000112 ... P19447 38127763
    907941 8wap:7 (5.85) BS01 SF4 3.6.4.12 GO:0000439 ... P18074 38127763
    907942 8wap:P (5.85) BS01 dna ? GO:0000785 ... P20226 38127763
    907943 8wap:P (5.85) BS02 dna ? GO:0000785 ... P20226 38127763
    907944 8wap:Q (5.85) BS01 dna ? GO:0000979 ... P52655 38127763
    907945 8wap:R (5.85) BS01 dna 2.3.1.48 GO:0000776 ... Q00403 38127763
    907946 8wap:R (5.85) BS02 dna 2.3.1.48 GO:0000776 ... Q00403 38127763
    907947 8wap:R (5.85) BS03 ZN 2.3.1.48 GO:0000776 ... Q00403 38127763
    907948 8wap:T (5.85) BS01 dna 3.6.4.12 GO:0005515 ... P13984 38127763
    907949 8wap:U (5.85) BS01 ZN ? GO:0005515 ... P29083 38127763
    907950 8wap:o (5.85) BS01 peptide 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    907951 8wap:o (5.85) BS02 rna 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    907952 8wap:o (5.85) BS03 dna 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    907953 8wap:o (5.85) BS04 dna 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    907954 8wap:o (5.85) BS05 ZN 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    907955 8wap:o (5.85) BS06 ZN 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    907956 8wap:o (5.85) BS07 MG 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    907957 8wap:p (5.85) BS01 rna 2.7.7.6 GO:0001172 ... A0A4X1TVZ5 38127763
    907958 8wap:p (5.85) BS02 dna 2.7.7.6 GO:0001172 ... A0A4X1TVZ5 38127763
    907959 8wap:p (5.85) BS03 W0F 2.7.7.6 GO:0001172 ... A0A4X1TVZ5 38127763
    907960 8wap:p (5.85) BS04 ZN 2.7.7.6 GO:0001172 ... A0A4X1TVZ5 38127763
    907961 8wap:q (5.85) BS01 ZN ? GO:0003677 ... I3LCH3 38127763
    907962 8wap:s (5.85) BS01 dna ? GO:0003677 ... A0A4X1VTX4 38127763
    907963 8wap:w (5.85) BS01 ZN ? GO:0001193 ... P60899 38127763
    907964 8wap:w (5.85) BS02 ZN ? GO:0001193 ... P60899 38127763
    907965 8wap:x (5.85) BS01 ZN ? GO:0003677 ... A0A493TD97 38127763
    907966 8wap:z (5.85) BS01 ZN ? GO:0001650 ... A0A4X1TRS6 38127763
    907967 8waq:0 (6.29) BS01 ZN ? GO:0000082 ... P51948 38127763
    907968 8waq:2 (6.29) BS01 ZN ? GO:0000438 ... Q13888 38127763
    907969 8waq:2 (6.29) BS02 ZN ? GO:0000438 ... Q13888 38127763
    907970 8waq:2 (6.29) BS03 ZN ? GO:0000438 ... Q13888 38127763
    907971 8waq:3 (6.29) BS01 ZN ? GO:0000438 ... Q13889 38127763
    907972 8waq:3 (6.29) BS02 ZN ? GO:0000438 ... Q13889 38127763
    907973 8waq:6 (6.29) BS01 dna 5.6.2.4 GO:0000112 ... P19447 38127763
    907974 8waq:6 (6.29) BS02 dna 5.6.2.4 GO:0000112 ... P19447 38127763
    907975 8waq:7 (6.29) BS01 SF4 3.6.4.12 GO:0000439 ... P18074 38127763
    907976 8waq:P (6.29) BS01 dna ? GO:0000785 ... P20226 38127763
    907977 8waq:P (6.29) BS02 dna ? GO:0000785 ... P20226 38127763
    907978 8waq:Q (6.29) BS01 dna ? GO:0000979 ... P52655 38127763
    907979 8waq:R (6.29) BS01 dna 2.3.1.48 GO:0000776 ... Q00403 38127763
    907980 8waq:R (6.29) BS02 dna 2.3.1.48 GO:0000776 ... Q00403 38127763
    907981 8waq:R (6.29) BS03 ZN 2.3.1.48 GO:0000776 ... Q00403 38127763
    907982 8waq:T (6.29) BS01 dna 3.6.4.12 GO:0005515 ... P13984 38127763
    907983 8waq:U (6.29) BS01 ZN ? GO:0005515 ... P29083 38127763
    907984 8waq:o (6.29) BS01 peptide 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    907985 8waq:o (6.29) BS02 rna 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    907986 8waq:o (6.29) BS03 dna 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    907987 8waq:o (6.29) BS04 dna 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    907988 8waq:o (6.29) BS05 ZN 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    907989 8waq:o (6.29) BS06 ZN 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    907990 8waq:o (6.29) BS07 MG 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    907991 8waq:p (6.29) BS01 rna 2.7.7.6 GO:0001172 ... A0A4X1TVZ5 38127763
    907992 8waq:p (6.29) BS02 dna 2.7.7.6 GO:0001172 ... A0A4X1TVZ5 38127763
    907993 8waq:p (6.29) BS03 W0F 2.7.7.6 GO:0001172 ... A0A4X1TVZ5 38127763
    907994 8waq:p (6.29) BS04 ZN 2.7.7.6 GO:0001172 ... A0A4X1TVZ5 38127763
    907995 8waq:q (6.29) BS01 ZN ? GO:0003677 ... I3LCH3 38127763
    907996 8waq:s (6.29) BS01 dna ? GO:0003677 ... A0A4X1VTX4 38127763
    907997 8waq:w (6.29) BS01 ZN ? GO:0001193 ... P60899 38127763
    907998 8waq:w (6.29) BS02 ZN ? GO:0001193 ... P60899 38127763
    907999 8waq:x (6.29) BS01 ZN ? GO:0003677 ... A0A493TD97 38127763
    908000 8waq:z (6.29) BS01 ZN ? GO:0001650 ... A0A4X1TRS6 38127763

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).