SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    908001 8war:0 (7.2) BS01 ZN ? GO:0000082 ... P51948 38127763
    908002 8war:2 (7.2) BS01 ZN ? GO:0000438 ... Q13888 38127763
    908003 8war:2 (7.2) BS02 ZN ? GO:0000438 ... Q13888 38127763
    908004 8war:2 (7.2) BS03 ZN ? GO:0000438 ... Q13888 38127763
    908005 8war:3 (7.2) BS01 ZN ? GO:0000438 ... Q13889 38127763
    908006 8war:3 (7.2) BS02 ZN ? GO:0000438 ... Q13889 38127763
    908007 8war:6 (7.2) BS01 dna 5.6.2.4 GO:0000112 ... P19447 38127763
    908008 8war:6 (7.2) BS02 dna 5.6.2.4 GO:0000112 ... P19447 38127763
    908009 8war:7 (7.2) BS01 SF4 3.6.4.12 GO:0000439 ... P18074 38127763
    908010 8war:P (7.2) BS01 dna ? GO:0000785 ... P20226 38127763
    908011 8war:P (7.2) BS02 dna ? GO:0000785 ... P20226 38127763
    908012 8war:Q (7.2) BS01 dna ? GO:0000979 ... P52655 38127763
    908013 8war:R (7.2) BS01 dna 2.3.1.48 GO:0000776 ... Q00403 38127763
    908014 8war:R (7.2) BS02 dna 2.3.1.48 GO:0000776 ... Q00403 38127763
    908015 8war:R (7.2) BS03 ZN 2.3.1.48 GO:0000776 ... Q00403 38127763
    908016 8war:T (7.2) BS01 dna 3.6.4.12 GO:0005515 ... P13984 38127763
    908017 8war:U (7.2) BS01 ZN ? GO:0005515 ... P29083 38127763
    908018 8war:o (7.2) BS01 peptide 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    908019 8war:o (7.2) BS02 rna 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    908020 8war:o (7.2) BS03 dna 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    908021 8war:o (7.2) BS04 dna 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    908022 8war:o (7.2) BS05 ZN 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    908023 8war:o (7.2) BS06 ZN 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    908024 8war:o (7.2) BS07 MG 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    908025 8war:p (7.2) BS01 rna 2.7.7.6 GO:0001172 ... A0A4X1TVZ5 38127763
    908026 8war:p (7.2) BS02 dna 2.7.7.6 GO:0001172 ... A0A4X1TVZ5 38127763
    908027 8war:p (7.2) BS03 W0F 2.7.7.6 GO:0001172 ... A0A4X1TVZ5 38127763
    908028 8war:p (7.2) BS04 ZN 2.7.7.6 GO:0001172 ... A0A4X1TVZ5 38127763
    908029 8war:q (7.2) BS01 ZN ? GO:0003677 ... I3LCH3 38127763
    908030 8war:s (7.2) BS01 dna ? GO:0003677 ... A0A4X1VTX4 38127763
    908031 8war:w (7.2) BS01 ZN ? GO:0001193 ... P60899 38127763
    908032 8war:w (7.2) BS02 ZN ? GO:0001193 ... P60899 38127763
    908033 8war:x (7.2) BS01 ZN ? GO:0003677 ... A0A493TD97 38127763
    908034 8war:z (7.2) BS01 ZN ? GO:0001650 ... A0A4X1TRS6 38127763
    908035 8was:0 (6.13) BS01 ZN ? GO:0000082 ... P51948 38127763
    908036 8was:2 (6.13) BS01 ZN ? GO:0000438 ... Q13888 38127763
    908037 8was:2 (6.13) BS02 ZN ? GO:0000438 ... Q13888 38127763
    908038 8was:2 (6.13) BS03 ZN ? GO:0000438 ... Q13888 38127763
    908039 8was:3 (6.13) BS01 ZN ? GO:0000438 ... Q13889 38127763
    908040 8was:3 (6.13) BS02 ZN ? GO:0000438 ... Q13889 38127763
    908041 8was:6 (6.13) BS01 dna 5.6.2.4 GO:0000112 ... P19447 38127763
    908042 8was:6 (6.13) BS02 dna 5.6.2.4 GO:0000112 ... P19447 38127763
    908043 8was:7 (6.13) BS01 SF4 3.6.4.12 GO:0000439 ... P18074 38127763
    908044 8was:P (6.13) BS01 dna ? GO:0000785 ... P20226 38127763
    908045 8was:P (6.13) BS02 dna ? GO:0000785 ... P20226 38127763
    908046 8was:Q (6.13) BS01 dna ? GO:0000979 ... P52655 38127763
    908047 8was:R (6.13) BS01 dna 2.3.1.48 GO:0000776 ... Q00403 38127763
    908048 8was:R (6.13) BS02 dna 2.3.1.48 GO:0000776 ... Q00403 38127763
    908049 8was:R (6.13) BS03 ZN 2.3.1.48 GO:0000776 ... Q00403 38127763
    908050 8was:T (6.13) BS01 dna 3.6.4.12 GO:0005515 ... P13984 38127763
    908051 8was:U (6.13) BS01 ZN ? GO:0005515 ... P29083 38127763
    908052 8was:o (6.13) BS01 peptide 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    908053 8was:o (6.13) BS02 rna 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    908054 8was:o (6.13) BS03 dna 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    908055 8was:o (6.13) BS04 dna 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    908056 8was:o (6.13) BS05 ZN 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    908057 8was:o (6.13) BS06 ZN 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    908058 8was:o (6.13) BS07 MG 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    908059 8was:p (6.13) BS01 rna 2.7.7.6 GO:0001172 ... A0A4X1TVZ5 38127763
    908060 8was:p (6.13) BS02 dna 2.7.7.6 GO:0001172 ... A0A4X1TVZ5 38127763
    908061 8was:p (6.13) BS03 W0F 2.7.7.6 GO:0001172 ... A0A4X1TVZ5 38127763
    908062 8was:p (6.13) BS04 ZN 2.7.7.6 GO:0001172 ... A0A4X1TVZ5 38127763
    908063 8was:q (6.13) BS01 ZN ? GO:0003677 ... I3LCH3 38127763
    908064 8was:s (6.13) BS01 dna ? GO:0003677 ... A0A4X1VTX4 38127763
    908065 8was:w (6.13) BS01 ZN ? GO:0001193 ... P60899 38127763
    908066 8was:w (6.13) BS02 ZN ? GO:0001193 ... P60899 38127763
    908067 8was:x (6.13) BS01 ZN ? GO:0003677 ... A0A493TD97 38127763
    908068 8was:z (6.13) BS01 ZN ? GO:0001650 ... A0A4X1TRS6 38127763
    908069 8wat:o (2.82) BS01 peptide 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    908070 8wat:o (2.82) BS02 dna 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    908071 8wat:o (2.82) BS03 rna 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    908072 8wat:o (2.82) BS04 ZN 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    908073 8wat:o (2.82) BS05 ZN 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    908074 8wat:o (2.82) BS06 MG 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    908075 8wat:o (2.82) BS07 W0F 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    908076 8wat:p (2.82) BS01 dna 2.7.7.6 GO:0000781 ... I3LGP4 38127763
    908077 8wat:p (2.82) BS02 rna 2.7.7.6 GO:0000781 ... I3LGP4 38127763
    908078 8wat:p (2.82) BS03 W0F 2.7.7.6 GO:0000781 ... I3LGP4 38127763
    908079 8wat:p (2.82) BS04 ZN 2.7.7.6 GO:0000781 ... I3LGP4 38127763
    908080 8wat:q (2.82) BS01 ZN ? GO:0003677 ... I3LCH3 38127763
    908081 8wat:s (2.82) BS01 dna ? GO:0003677 ... I3LSI7 38127763
    908082 8wat:w (2.82) BS01 ZN ? GO:0001193 ... P60899 38127763
    908083 8wat:w (2.82) BS02 ZN ? GO:0001193 ... P60899 38127763
    908084 8wat:x (2.82) BS01 ZN ? GO:0003677 ... A0A8W4F9W9 38127763
    908085 8wat:z (2.82) BS01 ZN ? GO:0001650 ... A0A4X1TRS6 38127763
    908086 8wau:o (2.78) BS01 peptide 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    908087 8wau:o (2.78) BS02 dna 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    908088 8wau:o (2.78) BS03 rna 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    908089 8wau:o (2.78) BS04 W0F 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    908090 8wau:o (2.78) BS05 ZN 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    908091 8wau:o (2.78) BS06 ZN 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    908092 8wau:o (2.78) BS07 MG 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    908093 8wau:p (2.78) BS01 dna 2.7.7.6 GO:0000781 ... I3LGP4 38127763
    908094 8wau:p (2.78) BS02 rna 2.7.7.6 GO:0000781 ... I3LGP4 38127763
    908095 8wau:p (2.78) BS03 W0F 2.7.7.6 GO:0000781 ... I3LGP4 38127763
    908096 8wau:p (2.78) BS04 ZN 2.7.7.6 GO:0000781 ... I3LGP4 38127763
    908097 8wau:q (2.78) BS01 ZN ? GO:0003677 ... I3LCH3 38127763
    908098 8wau:s (2.78) BS01 dna ? GO:0003677 ... I3LSI7 38127763
    908099 8wau:w (2.78) BS01 ZN ? GO:0001193 ... P60899 38127763
    908100 8wau:w (2.78) BS02 ZN ? GO:0001193 ... P60899 38127763
    908101 8wau:x (2.78) BS01 ZN ? GO:0003677 ... A0A8W4F9W9 38127763
    908102 8wau:z (2.78) BS01 ZN ? GO:0001650 ... A0A8D0JYF1 38127763
    908103 8wav:o (2.72) BS01 peptide 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    908104 8wav:o (2.72) BS02 dna 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    908105 8wav:o (2.72) BS03 dna 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    908106 8wav:o (2.72) BS04 rna 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    908107 8wav:o (2.72) BS05 ZN 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    908108 8wav:o (2.72) BS06 ZN 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    908109 8wav:o (2.72) BS07 MG 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    908110 8wav:o (2.72) BS08 W0F 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    908111 8wav:p (2.72) BS01 dna 2.7.7.6 GO:0000781 ... I3LGP4 38127763
    908112 8wav:p (2.72) BS02 rna 2.7.7.6 GO:0000781 ... I3LGP4 38127763
    908113 8wav:p (2.72) BS03 W0F 2.7.7.6 GO:0000781 ... I3LGP4 38127763
    908114 8wav:p (2.72) BS04 ZN 2.7.7.6 GO:0000781 ... I3LGP4 38127763
    908115 8wav:q (2.72) BS01 ZN ? GO:0003677 ... I3LCH3 38127763
    908116 8wav:s (2.72) BS01 dna ? GO:0003677 ... I3LSI7 38127763
    908117 8wav:w (2.72) BS01 ZN ? GO:0001193 ... P60899 38127763
    908118 8wav:w (2.72) BS02 ZN ? GO:0001193 ... P60899 38127763
    908119 8wav:x (2.72) BS01 ZN ? GO:0003677 ... A0A8W4F9W9 38127763
    908120 8wav:z (2.72) BS01 ZN ? GO:0001650 ... A0A8D0JYF1 38127763
    908121 8waw:o (3.02) BS01 peptide 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    908122 8waw:o (3.02) BS02 dna 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    908123 8waw:o (3.02) BS03 dna 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    908124 8waw:o (3.02) BS04 rna 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    908125 8waw:o (3.02) BS05 ZN 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    908126 8waw:o (3.02) BS06 ZN 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    908127 8waw:o (3.02) BS07 MG 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    908128 8waw:o (3.02) BS08 W0F 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    908129 8waw:p (3.02) BS01 dna 2.7.7.6 GO:0000781 ... I3LGP4 38127763
    908130 8waw:p (3.02) BS02 rna 2.7.7.6 GO:0000781 ... I3LGP4 38127763
    908131 8waw:p (3.02) BS03 W0F 2.7.7.6 GO:0000781 ... I3LGP4 38127763
    908132 8waw:p (3.02) BS04 ZN 2.7.7.6 GO:0000781 ... I3LGP4 38127763
    908133 8waw:q (3.02) BS01 ZN ? GO:0003677 ... I3LCH3 38127763
    908134 8waw:s (3.02) BS01 dna ? GO:0003677 ... I3LSI7 38127763
    908135 8waw:w (3.02) BS01 ZN ? GO:0001193 ... P60899 38127763
    908136 8waw:w (3.02) BS02 ZN ? GO:0001193 ... P60899 38127763
    908137 8waw:x (3.02) BS01 ZN ? GO:0003677 ... A0A8W4F9W9 38127763
    908138 8waw:z (3.02) BS01 ZN ? GO:0001650 ... A0A4X1TRS6 38127763
    908139 8wax:o (2.75) BS01 peptide 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    908140 8wax:o (2.75) BS02 dna 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    908141 8wax:o (2.75) BS03 dna 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    908142 8wax:o (2.75) BS04 rna 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    908143 8wax:o (2.75) BS05 ZN 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    908144 8wax:o (2.75) BS06 ZN 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    908145 8wax:o (2.75) BS07 MG 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    908146 8wax:o (2.75) BS08 W0F 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    908147 8wax:p (2.75) BS01 dna 2.7.7.6 GO:0000781 ... I3LGP4 38127763
    908148 8wax:p (2.75) BS02 rna 2.7.7.6 GO:0000781 ... I3LGP4 38127763
    908149 8wax:p (2.75) BS03 W0F 2.7.7.6 GO:0000781 ... I3LGP4 38127763
    908150 8wax:p (2.75) BS04 ZN 2.7.7.6 GO:0000781 ... I3LGP4 38127763
    908151 8wax:q (2.75) BS01 ZN ? GO:0003677 ... I3LCH3 38127763
    908152 8wax:s (2.75) BS01 dna ? GO:0003677 ... I3LSI7 38127763
    908153 8wax:w (2.75) BS01 ZN ? GO:0001193 ... P60899 38127763
    908154 8wax:w (2.75) BS02 ZN ? GO:0001193 ... P60899 38127763
    908155 8wax:x (2.75) BS01 ZN ? GO:0003677 ... A0A8W4F9W9 38127763
    908156 8wax:z (2.75) BS01 ZN ? GO:0001650 ... A0A4X1TRS6 38127763
    908157 8way:o (2.85) BS01 peptide 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    908158 8way:o (2.85) BS02 dna 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    908159 8way:o (2.85) BS03 dna 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    908160 8way:o (2.85) BS04 rna 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    908161 8way:o (2.85) BS05 ZN 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    908162 8way:o (2.85) BS06 ZN 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    908163 8way:o (2.85) BS07 MG 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    908164 8way:o (2.85) BS08 W0F 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    908165 8way:p (2.85) BS01 dna 2.7.7.6 GO:0000781 ... I3LGP4 38127763
    908166 8way:p (2.85) BS02 rna 2.7.7.6 GO:0000781 ... I3LGP4 38127763
    908167 8way:p (2.85) BS03 W0F 2.7.7.6 GO:0000781 ... I3LGP4 38127763
    908168 8way:p (2.85) BS04 ZN 2.7.7.6 GO:0000781 ... I3LGP4 38127763
    908169 8way:q (2.85) BS01 ZN ? GO:0003677 ... I3LCH3 38127763
    908170 8way:s (2.85) BS01 dna ? GO:0003677 ... I3LSI7 38127763
    908171 8way:w (2.85) BS01 ZN ? GO:0001193 ... P60899 38127763
    908172 8way:w (2.85) BS02 ZN ? GO:0001193 ... P60899 38127763
    908173 8way:x (2.85) BS01 ZN ? GO:0003677 ... A0A8W4F9W9 38127763
    908174 8way:z (2.85) BS01 ZN ? GO:0001650 ... A0A4X1TRS6 38127763
    908175 8waz:o (2.76) BS01 peptide 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    908176 8waz:o (2.76) BS02 dna 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    908177 8waz:o (2.76) BS03 dna 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    908178 8waz:o (2.76) BS04 rna 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    908179 8waz:o (2.76) BS05 ZN 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    908180 8waz:o (2.76) BS06 ZN 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    908181 8waz:o (2.76) BS07 MG 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    908182 8waz:o (2.76) BS08 W0F 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    908183 8waz:p (2.76) BS01 dna 2.7.7.6 GO:0000781 ... I3LGP4 38127763
    908184 8waz:p (2.76) BS02 rna 2.7.7.6 GO:0000781 ... I3LGP4 38127763
    908185 8waz:p (2.76) BS03 W0F 2.7.7.6 GO:0000781 ... I3LGP4 38127763
    908186 8waz:p (2.76) BS04 ZN 2.7.7.6 GO:0000781 ... I3LGP4 38127763
    908187 8waz:q (2.76) BS01 ZN ? GO:0003677 ... I3LCH3 38127763
    908188 8waz:s (2.76) BS01 dna ? GO:0003677 ... I3LSI7 38127763
    908189 8waz:w (2.76) BS01 ZN ? GO:0001193 ... P60899 38127763
    908190 8waz:w (2.76) BS02 ZN ? GO:0001193 ... P60899 38127763
    908191 8waz:x (2.76) BS01 ZN ? GO:0003677 ... A0A8W4F9W9 38127763
    908192 8waz:z (2.76) BS01 ZN ? GO:0001650 ... A0A4X1TRS6 38127763
    908193 8wb0:o (2.94) BS01 peptide 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    908194 8wb0:o (2.94) BS02 dna 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    908195 8wb0:o (2.94) BS03 dna 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    908196 8wb0:o (2.94) BS04 rna 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    908197 8wb0:o (2.94) BS05 ZN 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    908198 8wb0:o (2.94) BS06 ZN 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    908199 8wb0:o (2.94) BS07 MG 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    908200 8wb0:o (2.94) BS08 W0F 2.7.7.6 GO:0001172 ... A0A8D1DPV6 38127763
    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).