SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    908201 8wb0:p (2.94) BS01 dna 2.7.7.6 GO:0000781 ... I3LGP4 38127763
    908202 8wb0:p (2.94) BS02 rna 2.7.7.6 GO:0000781 ... I3LGP4 38127763
    908203 8wb0:p (2.94) BS03 W0F 2.7.7.6 GO:0000781 ... I3LGP4 38127763
    908204 8wb0:p (2.94) BS04 ZN 2.7.7.6 GO:0000781 ... I3LGP4 38127763
    908205 8wb0:q (2.94) BS01 ZN ? GO:0003677 ... I3LCH3 38127763
    908206 8wb0:s (2.94) BS01 dna ? GO:0003677 ... I3LSI7 38127763
    908207 8wb0:w (2.94) BS01 ZN ? GO:0001193 ... P60899 38127763
    908208 8wb0:w (2.94) BS02 ZN ? GO:0001193 ... P60899 38127763
    908209 8wb0:x (2.94) BS01 ZN ? GO:0003677 ... A0A8W4F9W9 38127763
    908210 8wb0:z (2.94) BS01 ZN ? GO:0001650 ... A0A8D0JYF1 38127763
    908211 8wb1:A (1.72) BS01 GDP N/A GO:0000165 ... H2Q5M0 N/A
    908212 8wb1:A (1.72) BS02 W3T N/A GO:0000165 ... H2Q5M0 N/A
    908213 8wb2:A (1.9) BS01 HEM ? GO:0000302 ... Q9FGT8 38103756
    908214 8wb3:A (2.49) BS01 FE N/A GO:0004322 ... P02794 38315811
    908215 8wb3:A (2.49) BS02 FE N/A GO:0004322 ... P02794 38315811
    908216 8wb3:A (2.49) BS03 CA N/A GO:0004322 ... P02794 38315811
    908217 8wb4:0 (2.47) BS01 CLA N/A GO:0009765 ... N/A 38806516
    908218 8wb4:0 (2.47) BS02 CLA N/A GO:0009765 ... N/A 38806516
    908219 8wb4:0 (2.47) BS03 CLA N/A GO:0009765 ... N/A 38806516
    908220 8wb4:0 (2.47) BS04 CLA N/A GO:0009765 ... N/A 38806516
    908221 8wb4:0 (2.47) BS05 CLA N/A GO:0009765 ... N/A 38806516
    908222 8wb4:0 (2.47) BS06 CLA N/A GO:0009765 ... N/A 38806516
    908223 8wb4:0 (2.47) BS07 CLA N/A GO:0009765 ... N/A 38806516
    908224 8wb4:0 (2.47) BS08 CLA N/A GO:0009765 ... N/A 38806516
    908225 8wb4:0 (2.47) BS09 CLA N/A GO:0009765 ... N/A 38806516
    908226 8wb4:0 (2.47) BS10 KC2 N/A GO:0009765 ... N/A 38806516
    908227 8wb4:0 (2.47) BS11 CLA N/A GO:0009765 ... N/A 38806516
    908228 8wb4:0 (2.47) BS12 CLA N/A GO:0009765 ... N/A 38806516
    908229 8wb4:0 (2.47) BS13 CLA N/A GO:0009765 ... N/A 38806516
    908230 8wb4:0 (2.47) BS14 IHT N/A GO:0009765 ... N/A 38806516
    908231 8wb4:0 (2.47) BS15 II0 N/A GO:0009765 ... N/A 38806516
    908232 8wb4:0 (2.47) BS16 II0 N/A GO:0009765 ... N/A 38806516
    908233 8wb4:0 (2.47) BS17 II0 N/A GO:0009765 ... N/A 38806516
    908234 8wb4:0 (2.47) BS18 IHT N/A GO:0009765 ... N/A 38806516
    908235 8wb4:0 (2.47) BS19 II0 N/A GO:0009765 ... N/A 38806516
    908236 8wb4:1 (2.47) BS01 CLA N/A GO:0009765 ... N/A 38806516
    908237 8wb4:1 (2.47) BS02 CLA N/A GO:0009765 ... N/A 38806516
    908238 8wb4:1 (2.47) BS03 CLA N/A GO:0009765 ... N/A 38806516
    908239 8wb4:1 (2.47) BS04 CLA N/A GO:0009765 ... N/A 38806516
    908240 8wb4:1 (2.47) BS05 CLA N/A GO:0009765 ... N/A 38806516
    908241 8wb4:1 (2.47) BS06 CLA N/A GO:0009765 ... N/A 38806516
    908242 8wb4:1 (2.47) BS07 CLA N/A GO:0009765 ... N/A 38806516
    908243 8wb4:1 (2.47) BS08 CLA N/A GO:0009765 ... N/A 38806516
    908244 8wb4:1 (2.47) BS09 CLA N/A GO:0009765 ... N/A 38806516
    908245 8wb4:1 (2.47) BS10 KC2 N/A GO:0009765 ... N/A 38806516
    908246 8wb4:1 (2.47) BS11 CLA N/A GO:0009765 ... N/A 38806516
    908247 8wb4:1 (2.47) BS12 CLA N/A GO:0009765 ... N/A 38806516
    908248 8wb4:1 (2.47) BS13 CLA N/A GO:0009765 ... N/A 38806516
    908249 8wb4:1 (2.47) BS14 II0 N/A GO:0009765 ... N/A 38806516
    908250 8wb4:1 (2.47) BS15 II3 N/A GO:0009765 ... N/A 38806516
    908251 8wb4:1 (2.47) BS16 II0 N/A GO:0009765 ... N/A 38806516
    908252 8wb4:1 (2.47) BS17 II0 N/A GO:0009765 ... N/A 38806516
    908253 8wb4:1 (2.47) BS18 IHT N/A GO:0009765 ... N/A 38806516
    908254 8wb4:1 (2.47) BS19 II0 N/A GO:0009765 ... N/A 38806516
    908255 8wb4:2 (2.47) BS01 II0 N/A GO:0009765 ... N/A 38806516
    908256 8wb4:2 (2.47) BS02 CLA N/A GO:0009765 ... N/A 38806516
    908257 8wb4:2 (2.47) BS03 CLA N/A GO:0009765 ... N/A 38806516
    908258 8wb4:2 (2.47) BS04 CLA N/A GO:0009765 ... N/A 38806516
    908259 8wb4:2 (2.47) BS05 CLA N/A GO:0009765 ... N/A 38806516
    908260 8wb4:2 (2.47) BS06 CLA N/A GO:0009765 ... N/A 38806516
    908261 8wb4:2 (2.47) BS07 CLA N/A GO:0009765 ... N/A 38806516
    908262 8wb4:2 (2.47) BS08 CLA N/A GO:0009765 ... N/A 38806516
    908263 8wb4:2 (2.47) BS09 CLA N/A GO:0009765 ... N/A 38806516
    908264 8wb4:2 (2.47) BS10 KC2 N/A GO:0009765 ... N/A 38806516
    908265 8wb4:2 (2.47) BS11 CLA N/A GO:0009765 ... N/A 38806516
    908266 8wb4:2 (2.47) BS12 CLA N/A GO:0009765 ... N/A 38806516
    908267 8wb4:2 (2.47) BS13 II0 N/A GO:0009765 ... N/A 38806516
    908268 8wb4:2 (2.47) BS14 II0 N/A GO:0009765 ... N/A 38806516
    908269 8wb4:2 (2.47) BS15 II0 N/A GO:0009765 ... N/A 38806516
    908270 8wb4:2 (2.47) BS16 IHT N/A GO:0009765 ... N/A 38806516
    908271 8wb4:2 (2.47) BS17 II0 N/A GO:0009765 ... N/A 38806516
    908272 8wb4:3 (2.47) BS01 CLA N/A GO:0009765 ... N/A 38806516
    908273 8wb4:3 (2.47) BS02 II0 N/A GO:0009765 ... N/A 38806516
    908274 8wb4:3 (2.47) BS03 CLA N/A GO:0009765 ... N/A 38806516
    908275 8wb4:3 (2.47) BS04 CLA N/A GO:0009765 ... N/A 38806516
    908276 8wb4:3 (2.47) BS05 CLA N/A GO:0009765 ... N/A 38806516
    908277 8wb4:3 (2.47) BS06 CLA N/A GO:0009765 ... N/A 38806516
    908278 8wb4:3 (2.47) BS07 CLA N/A GO:0009765 ... N/A 38806516
    908279 8wb4:3 (2.47) BS08 CLA N/A GO:0009765 ... N/A 38806516
    908280 8wb4:3 (2.47) BS09 CLA N/A GO:0009765 ... N/A 38806516
    908281 8wb4:3 (2.47) BS10 CLA N/A GO:0009765 ... N/A 38806516
    908282 8wb4:3 (2.47) BS11 CLA N/A GO:0009765 ... N/A 38806516
    908283 8wb4:3 (2.47) BS12 CLA N/A GO:0009765 ... N/A 38806516
    908284 8wb4:3 (2.47) BS13 II0 N/A GO:0009765 ... N/A 38806516
    908285 8wb4:3 (2.47) BS14 II0 N/A GO:0009765 ... N/A 38806516
    908286 8wb4:3 (2.47) BS15 II0 N/A GO:0009765 ... N/A 38806516
    908287 8wb4:3 (2.47) BS16 8CT N/A GO:0009765 ... N/A 38806516
    908288 8wb4:4 (2.47) BS01 CLA N/A GO:0009765 ... N/A 38806516
    908289 8wb4:4 (2.47) BS02 CLA N/A GO:0009765 ... N/A 38806516
    908290 8wb4:4 (2.47) BS03 CLA N/A GO:0009765 ... N/A 38806516
    908291 8wb4:4 (2.47) BS04 CLA N/A GO:0009765 ... N/A 38806516
    908292 8wb4:4 (2.47) BS05 CLA N/A GO:0009765 ... N/A 38806516
    908293 8wb4:4 (2.47) BS06 CLA N/A GO:0009765 ... N/A 38806516
    908294 8wb4:4 (2.47) BS07 CLA N/A GO:0009765 ... N/A 38806516
    908295 8wb4:4 (2.47) BS08 CLA N/A GO:0009765 ... N/A 38806516
    908296 8wb4:4 (2.47) BS09 CLA N/A GO:0009765 ... N/A 38806516
    908297 8wb4:4 (2.47) BS10 KC2 N/A GO:0009765 ... N/A 38806516
    908298 8wb4:4 (2.47) BS11 CLA N/A GO:0009765 ... N/A 38806516
    908299 8wb4:4 (2.47) BS12 CLA N/A GO:0009765 ... N/A 38806516
    908300 8wb4:4 (2.47) BS13 CLA N/A GO:0009765 ... N/A 38806516
    908301 8wb4:4 (2.47) BS14 IHT N/A GO:0009765 ... N/A 38806516
    908302 8wb4:4 (2.47) BS15 II0 N/A GO:0009765 ... N/A 38806516
    908303 8wb4:4 (2.47) BS16 II0 N/A GO:0009765 ... N/A 38806516
    908304 8wb4:4 (2.47) BS17 IHT N/A GO:0009765 ... N/A 38806516
    908305 8wb4:4 (2.47) BS18 II0 N/A GO:0009765 ... N/A 38806516
    908306 8wb4:4 (2.47) BS19 II0 N/A GO:0009765 ... N/A 38806516
    908307 8wb4:5 (2.47) BS01 CLA N/A GO:0009765 ... N/A 38806516
    908308 8wb4:5 (2.47) BS02 II0 N/A GO:0009765 ... N/A 38806516
    908309 8wb4:5 (2.47) BS03 CLA N/A GO:0009765 ... N/A 38806516
    908310 8wb4:5 (2.47) BS04 CLA N/A GO:0009765 ... N/A 38806516
    908311 8wb4:5 (2.47) BS05 CLA N/A GO:0009765 ... N/A 38806516
    908312 8wb4:5 (2.47) BS06 CLA N/A GO:0009765 ... N/A 38806516
    908313 8wb4:5 (2.47) BS07 CLA N/A GO:0009765 ... N/A 38806516
    908314 8wb4:5 (2.47) BS08 CLA N/A GO:0009765 ... N/A 38806516
    908315 8wb4:5 (2.47) BS09 CLA N/A GO:0009765 ... N/A 38806516
    908316 8wb4:5 (2.47) BS10 CLA N/A GO:0009765 ... N/A 38806516
    908317 8wb4:5 (2.47) BS11 CLA N/A GO:0009765 ... N/A 38806516
    908318 8wb4:5 (2.47) BS12 KC2 N/A GO:0009765 ... N/A 38806516
    908319 8wb4:5 (2.47) BS13 CLA N/A GO:0009765 ... N/A 38806516
    908320 8wb4:5 (2.47) BS14 CLA N/A GO:0009765 ... N/A 38806516
    908321 8wb4:5 (2.47) BS15 II0 N/A GO:0009765 ... N/A 38806516
    908322 8wb4:5 (2.47) BS16 II0 N/A GO:0009765 ... N/A 38806516
    908323 8wb4:5 (2.47) BS17 II0 N/A GO:0009765 ... N/A 38806516
    908324 8wb4:5 (2.47) BS18 IHT N/A GO:0009765 ... N/A 38806516
    908325 8wb4:5 (2.47) BS19 II0 N/A GO:0009765 ... N/A 38806516
    908326 8wb4:5 (2.47) BS20 CLA N/A GO:0009765 ... N/A 38806516
    908327 8wb4:6 (2.47) BS01 II0 N/A GO:0009765 ... N/A 38806516
    908328 8wb4:6 (2.47) BS02 CLA N/A GO:0009765 ... N/A 38806516
    908329 8wb4:6 (2.47) BS03 CLA N/A GO:0009765 ... N/A 38806516
    908330 8wb4:6 (2.47) BS04 CLA N/A GO:0009765 ... N/A 38806516
    908331 8wb4:6 (2.47) BS05 CLA N/A GO:0009765 ... N/A 38806516
    908332 8wb4:6 (2.47) BS06 KC2 N/A GO:0009765 ... N/A 38806516
    908333 8wb4:6 (2.47) BS07 CLA N/A GO:0009765 ... N/A 38806516
    908334 8wb4:6 (2.47) BS08 CLA N/A GO:0009765 ... N/A 38806516
    908335 8wb4:6 (2.47) BS09 CLA N/A GO:0009765 ... N/A 38806516
    908336 8wb4:6 (2.47) BS10 CLA N/A GO:0009765 ... N/A 38806516
    908337 8wb4:6 (2.47) BS11 II0 N/A GO:0009765 ... N/A 38806516
    908338 8wb4:6 (2.47) BS12 II3 N/A GO:0009765 ... N/A 38806516
    908339 8wb4:6 (2.47) BS13 II0 N/A GO:0009765 ... N/A 38806516
    908340 8wb4:6 (2.47) BS14 8CT N/A GO:0009765 ... N/A 38806516
    908341 8wb4:7 (2.47) BS01 CLA N/A GO:0009765 ... N/A 38806516
    908342 8wb4:7 (2.47) BS02 CLA N/A GO:0009765 ... N/A 38806516
    908343 8wb4:7 (2.47) BS03 CLA N/A GO:0009765 ... N/A 38806516
    908344 8wb4:7 (2.47) BS04 CLA N/A GO:0009765 ... N/A 38806516
    908345 8wb4:7 (2.47) BS05 CLA N/A GO:0009765 ... N/A 38806516
    908346 8wb4:7 (2.47) BS06 CLA N/A GO:0009765 ... N/A 38806516
    908347 8wb4:7 (2.47) BS07 CLA N/A GO:0009765 ... N/A 38806516
    908348 8wb4:7 (2.47) BS08 CLA N/A GO:0009765 ... N/A 38806516
    908349 8wb4:7 (2.47) BS09 CLA N/A GO:0009765 ... N/A 38806516
    908350 8wb4:7 (2.47) BS10 KC2 N/A GO:0009765 ... N/A 38806516
    908351 8wb4:7 (2.47) BS11 CLA N/A GO:0009765 ... N/A 38806516
    908352 8wb4:7 (2.47) BS12 CLA N/A GO:0009765 ... N/A 38806516
    908353 8wb4:7 (2.47) BS13 CLA N/A GO:0009765 ... N/A 38806516
    908354 8wb4:7 (2.47) BS14 II0 N/A GO:0009765 ... N/A 38806516
    908355 8wb4:7 (2.47) BS15 II3 N/A GO:0009765 ... N/A 38806516
    908356 8wb4:7 (2.47) BS16 II0 N/A GO:0009765 ... N/A 38806516
    908357 8wb4:7 (2.47) BS17 II0 N/A GO:0009765 ... N/A 38806516
    908358 8wb4:7 (2.47) BS18 IHT N/A GO:0009765 ... N/A 38806516
    908359 8wb4:7 (2.47) BS19 II0 N/A GO:0009765 ... N/A 38806516
    908360 8wb4:8 (2.47) BS01 II0 N/A GO:0009765 ... N/A 38806516
    908361 8wb4:8 (2.47) BS02 CLA N/A GO:0009765 ... N/A 38806516
    908362 8wb4:8 (2.47) BS03 CLA N/A GO:0009765 ... N/A 38806516
    908363 8wb4:8 (2.47) BS04 CLA N/A GO:0009765 ... N/A 38806516
    908364 8wb4:8 (2.47) BS05 CLA N/A GO:0009765 ... N/A 38806516
    908365 8wb4:8 (2.47) BS06 CLA N/A GO:0009765 ... N/A 38806516
    908366 8wb4:8 (2.47) BS07 CLA N/A GO:0009765 ... N/A 38806516
    908367 8wb4:8 (2.47) BS08 CLA N/A GO:0009765 ... N/A 38806516
    908368 8wb4:8 (2.47) BS09 CLA N/A GO:0009765 ... N/A 38806516
    908369 8wb4:8 (2.47) BS10 KC2 N/A GO:0009765 ... N/A 38806516
    908370 8wb4:8 (2.47) BS11 CLA N/A GO:0009765 ... N/A 38806516
    908371 8wb4:8 (2.47) BS12 CLA N/A GO:0009765 ... N/A 38806516
    908372 8wb4:8 (2.47) BS13 II0 N/A GO:0009765 ... N/A 38806516
    908373 8wb4:8 (2.47) BS14 II0 N/A GO:0009765 ... N/A 38806516
    908374 8wb4:8 (2.47) BS15 II0 N/A GO:0009765 ... N/A 38806516
    908375 8wb4:8 (2.47) BS16 IHT N/A GO:0009765 ... N/A 38806516
    908376 8wb4:8 (2.47) BS17 II0 N/A GO:0009765 ... N/A 38806516
    908377 8wb4:9 (2.47) BS01 CLA N/A GO:0009765 ... N/A 38806516
    908378 8wb4:9 (2.47) BS02 II0 N/A GO:0009765 ... N/A 38806516
    908379 8wb4:9 (2.47) BS03 II0 N/A GO:0009765 ... N/A 38806516
    908380 8wb4:9 (2.47) BS04 CLA N/A GO:0009765 ... N/A 38806516
    908381 8wb4:9 (2.47) BS05 CLA N/A GO:0009765 ... N/A 38806516
    908382 8wb4:9 (2.47) BS06 CLA N/A GO:0009765 ... N/A 38806516
    908383 8wb4:9 (2.47) BS07 CLA N/A GO:0009765 ... N/A 38806516
    908384 8wb4:9 (2.47) BS08 CLA N/A GO:0009765 ... N/A 38806516
    908385 8wb4:9 (2.47) BS09 CLA N/A GO:0009765 ... N/A 38806516
    908386 8wb4:9 (2.47) BS10 CLA N/A GO:0009765 ... N/A 38806516
    908387 8wb4:9 (2.47) BS11 CLA N/A GO:0009765 ... N/A 38806516
    908388 8wb4:9 (2.47) BS12 CLA N/A GO:0009765 ... N/A 38806516
    908389 8wb4:9 (2.47) BS13 CLA N/A GO:0009765 ... N/A 38806516
    908390 8wb4:9 (2.47) BS14 II0 N/A GO:0009765 ... N/A 38806516
    908391 8wb4:9 (2.47) BS15 II0 N/A GO:0009765 ... N/A 38806516
    908392 8wb4:9 (2.47) BS16 II0 N/A GO:0009765 ... N/A 38806516
    908393 8wb4:9 (2.47) BS17 8CT N/A GO:0009765 ... N/A 38806516
    908394 8wb4:A (2.47) BS01 peptide 1.10.3.9 GO:0005506 ... A0A222AI41 38806516
    908395 8wb4:A (2.47) BS02 OEX 1.10.3.9 GO:0005506 ... A0A222AI41 38806516
    908396 8wb4:A (2.47) BS03 CLA 1.10.3.9 GO:0005506 ... A0A222AI41 38806516
    908397 8wb4:A (2.47) BS04 CLA 1.10.3.9 GO:0005506 ... A0A222AI41 38806516
    908398 8wb4:A (2.47) BS05 PHO 1.10.3.9 GO:0005506 ... A0A222AI41 38806516
    908399 8wb4:A (2.47) BS06 CLA 1.10.3.9 GO:0005506 ... A0A222AI41 38806516
    908400 8wb4:A (2.47) BS07 8CT 1.10.3.9 GO:0005506 ... A0A222AI41 38806516

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).