SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 4538 4539 4540 4541 4542 4543 4544 4545 4546 4547 4548 4549 4550 4551 4552 4553 4554 4555 4556 4557 4558 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    909401 8xsy:LY (3.0) BS01 rna N/A GO:0002181 ... P61254 38942792
    909402 8xsy:LY (3.0) BS02 rna N/A GO:0002181 ... P61254 38942792
    909403 8xsy:LZ (3.0) BS01 rna N/A GO:0002181 ... P61353 38942792
    909404 8xsy:La (3.0) BS01 rna N/A GO:0002181 ... P46776 38942792
    909405 8xsy:Lb (3.0) BS01 rna N/A GO:0002181 ... P47914 38942792
    909406 8xsy:Lc (3.0) BS01 rna N/A GO:0002181 ... P62888 38942792
    909407 8xsy:Lc (3.0) BS02 peptide N/A GO:0002181 ... P62888 38942792
    909408 8xsy:Ld (3.0) BS01 rna N/A GO:0002181 ... P62899 38942792
    909409 8xsy:Le (3.0) BS01 rna N/A GO:0002181 ... P62910 38942792
    909410 8xsy:Le (3.0) BS02 MG N/A GO:0002181 ... P62910 38942792
    909411 8xsy:Lf (3.0) BS01 rna N/A GO:0000049 ... P18077 38942792
    909412 8xsy:Lg (3.0) BS01 rna N/A GO:0002181 ... P49207 38942792
    909413 8xsy:Lg (3.0) BS02 peptide N/A GO:0002181 ... P49207 38942792
    909414 8xsy:Lg (3.0) BS03 MG N/A GO:0002181 ... P49207 38942792
    909415 8xsy:Lg (3.0) BS04 ZN N/A GO:0002181 ... P49207 38942792
    909416 8xsy:Lh (3.0) BS01 rna N/A GO:0000463 ... P42766 38942792
    909417 8xsy:Lh (3.0) BS02 rna N/A GO:0000463 ... P42766 38942792
    909418 8xsy:Li (3.0) BS01 rna N/A GO:0002181 ... Q9Y3U8 38942792
    909419 8xsy:Lj (3.0) BS01 rna N/A GO:0002181 ... P61927 38942792
    909420 8xsy:Lj (3.0) BS02 rna N/A GO:0002181 ... P61927 38942792
    909421 8xsy:Lj (3.0) BS03 ZN N/A GO:0002181 ... P61927 38942792
    909422 8xsy:Lk (3.0) BS01 rna N/A GO:0001501 ... P63173 38942792
    909423 8xsy:Ll (3.0) BS01 rna N/A GO:0002181 ... P62891 38942792
    909424 8xsy:Ll (3.0) BS02 rna N/A GO:0002181 ... P62891 38942792
    909425 8xsy:Lm (3.0) BS01 rna N/A GO:0002181 ... P62987 38942792
    909426 8xsy:Lm (3.0) BS02 ZN N/A GO:0002181 ... P62987 38942792
    909427 8xsy:Lo (3.0) BS01 rna N/A GO:0002181 ... P83881 38942792
    909428 8xsy:Lo (3.0) BS02 rna N/A GO:0002181 ... P83881 38942792
    909429 8xsy:Lo (3.0) BS03 ZN N/A GO:0002181 ... P83881 38942792
    909430 8xsy:Lp (3.0) BS01 rna N/A GO:0002181 ... P61513 38942792
    909431 8xsy:Lp (3.0) BS02 ZN N/A GO:0002181 ... P61513 38942792
    909432 8xsy:Lr (3.0) BS01 rna N/A GO:0002181 ... P46779 38942792
    909433 8xsy:Ls (3.0) BS01 rna N/A GO:0002181 ... P05388 38942792
    909434 8xsy:Lt (3.0) BS01 rna N/A GO:0002181 ... P30050 38942792
    909435 8xsy:SA (3.0) BS01 rna N/A GO:0000028 ... P08865 38942792
    909436 8xsy:SB (3.0) BS01 rna N/A GO:0002181 ... P61247 38942792
    909437 8xsy:SB (3.0) BS02 rna N/A GO:0002181 ... P61247 38942792
    909438 8xsy:SC (3.0) BS01 rna N/A GO:0002181 ... P15880 38942792
    909439 8xsy:SD (3.0) BS01 rna N/A GO:0000977 ... P23396 38942792
    909440 8xsy:SE (3.0) BS01 rna N/A GO:0002181 ... P62701 38942792
    909441 8xsy:SF (3.0) BS01 rna N/A GO:0000028 ... P46782 38942792
    909442 8xsy:SG (3.0) BS01 rna N/A GO:0000082 ... P62753 38942792
    909443 8xsy:SH (3.0) BS01 rna N/A GO:0001843 ... P62081 38942792
    909444 8xsy:SI (3.0) BS01 rna N/A GO:0000462 ... P62241 38942792
    909445 8xsy:SI (3.0) BS02 rna N/A GO:0000462 ... P62241 38942792
    909446 8xsy:SJ (3.0) BS01 rna N/A GO:0002181 ... P46781 38942792
    909447 8xsy:SK (3.0) BS01 rna N/A GO:0002181 ... P46783 38942792
    909448 8xsy:SL (3.0) BS01 rna N/A GO:0002181 ... P62280 38942792
    909449 8xsy:SM (3.0) BS01 rna N/A GO:0002181 ... P25398 38942792
    909450 8xsy:SM (3.0) BS02 ZN N/A GO:0002181 ... P25398 38942792
    909451 8xsy:SN (3.0) BS01 rna N/A GO:0002181 ... P62277 38942792
    909452 8xsy:SO (3.0) BS01 rna N/A GO:0000028 ... P62263 38942792
    909453 8xsy:SP (3.0) BS01 rna N/A GO:0000028 ... P62841 38942792
    909454 8xsy:SQ (3.0) BS01 rna N/A GO:0000462 ... P62249 38942792
    909455 8xsy:SR (3.0) BS01 rna N/A GO:0002181 ... P08708 38942792
    909456 8xsy:SS (3.0) BS01 rna N/A GO:0002181 ... P62269 38942792
    909457 8xsy:ST (3.0) BS01 rna N/A GO:0000028 ... P39019 38942792
    909458 8xsy:SU (3.0) BS01 rna N/A GO:0002181 ... P60866 38942792
    909459 8xsy:SW (3.0) BS01 rna N/A GO:0002181 ... P62244 38942792
    909460 8xsy:SX (3.0) BS01 rna N/A GO:0002181 ... P62266 38942792
    909461 8xsy:SY (3.0) BS01 rna N/A GO:0002181 ... P62847 38942792
    909462 8xsy:SZ (3.0) BS01 rna N/A GO:0002181 ... P62851 38942792
    909463 8xsy:Sa (3.0) BS01 rna N/A GO:0002181 ... P62854 38942792
    909464 8xsy:Sa (3.0) BS02 ZN N/A GO:0002181 ... P62854 38942792
    909465 8xsy:Sb (3.0) BS01 rna N/A GO:0000028 ... P42677 38942792
    909466 8xsy:Sc (3.0) BS01 rna N/A GO:0000028 ... P62857 38942792
    909467 8xsy:Sd (3.0) BS01 rna N/A GO:0002181 ... P62273 38942792
    909468 8xsy:Se (3.0) BS01 rna N/A GO:0003735 ... P62861 38942792
    909469 8xsy:Sf (3.0) BS01 rna N/A GO:0002181 ... P62979 38942792
    909470 8xsy:Sg (3.0) BS01 rna N/A GO:0001891 ... P63244 38942792
    909471 8xsz:CA (3.2) BS01 rna N/A GO:0003676 ... Q9UQ80 38942792
    909472 8xsz:LA (3.2) BS01 rna N/A GO:0002181 ... P62917 38942792
    909473 8xsz:LA (3.2) BS02 rna N/A GO:0002181 ... P62917 38942792
    909474 8xsz:LA (3.2) BS03 MG N/A GO:0002181 ... P62917 38942792
    909475 8xsz:LB (3.2) BS01 rna N/A GO:0002181 ... P39023 38942792
    909476 8xsz:LC (3.2) BS01 rna N/A GO:0002181 ... P36578 38942792
    909477 8xsz:LC (3.2) BS02 rna N/A GO:0002181 ... P36578 38942792
    909478 8xsz:LD (3.2) BS01 rna N/A GO:0000027 ... P46777 38942792
    909479 8xsz:LD (3.2) BS02 rna N/A GO:0000027 ... P46777 38942792
    909480 8xsz:LE (3.2) BS01 rna N/A GO:0002181 ... Q02878 38942792
    909481 8xsz:LF (3.2) BS01 rna N/A GO:0000463 ... P18124 38942792
    909482 8xsz:LF (3.2) BS02 rna N/A GO:0000463 ... P18124 38942792
    909483 8xsz:LG (3.2) BS01 rna N/A GO:0000470 ... P62424 38942792
    909484 8xsz:LG (3.2) BS02 rna N/A GO:0000470 ... P62424 38942792
    909485 8xsz:LH (3.2) BS01 rna N/A GO:0002181 ... P32969 38942792
    909486 8xsz:LI (3.2) BS01 rna N/A GO:0000122 ... P27635 38942792
    909487 8xsz:LI (3.2) BS02 rna N/A GO:0000122 ... P27635 38942792
    909488 8xsz:LI (3.2) BS03 rna N/A GO:0000122 ... P27635 38942792
    909489 8xsz:LJ (3.2) BS01 rna N/A GO:0000027 ... P62913 38942792
    909490 8xsz:LJ (3.2) BS02 rna N/A GO:0000027 ... P62913 38942792
    909491 8xsz:LL (3.2) BS01 rna N/A GO:0001824 ... P26373 38942792
    909492 8xsz:LL (3.2) BS02 rna N/A GO:0001824 ... P26373 38942792
    909493 8xsz:LM (3.2) BS01 rna N/A GO:0002181 ... P50914 38942792
    909494 8xsz:LN (3.2) BS01 rna N/A GO:0002181 ... P61313 38942792
    909495 8xsz:LN (3.2) BS02 rna N/A GO:0002181 ... P61313 38942792
    909496 8xsz:LO (3.2) BS01 rna N/A GO:0002181 ... P40429 38942792
    909497 8xsz:LP (3.2) BS01 rna N/A GO:0002181 ... P18621 38942792
    909498 8xsz:LP (3.2) BS02 rna N/A GO:0002181 ... P18621 38942792
    909499 8xsz:LQ (3.2) BS01 rna N/A GO:0002181 ... Q07020 38942792
    909500 8xsz:LR (3.2) BS01 rna N/A GO:0002181 ... P84098 38942792
    909501 8xsz:LS (3.2) BS01 rna N/A GO:0002181 ... Q02543 38942792
    909502 8xsz:LS (3.2) BS02 rna N/A GO:0002181 ... Q02543 38942792
    909503 8xsz:LT (3.2) BS01 rna N/A GO:0002181 ... P46778 38942792
    909504 8xsz:LT (3.2) BS02 rna N/A GO:0002181 ... P46778 38942792
    909505 8xsz:LU (3.2) BS01 rna N/A GO:0002181 ... P35268 38942792
    909506 8xsz:LV (3.2) BS01 rna N/A GO:0000122 ... P62829 38942792
    909507 8xsz:LV (3.2) BS02 rna N/A GO:0000122 ... P62829 38942792
    909508 8xsz:LW (3.2) BS01 rna N/A GO:0000027 ... P83731 38942792
    909509 8xsz:LW (3.2) BS02 rna N/A GO:0000027 ... P83731 38942792
    909510 8xsz:LX (3.2) BS01 rna N/A GO:0002181 ... P62750 38942792
    909511 8xsz:LX (3.2) BS02 rna N/A GO:0002181 ... P62750 38942792
    909512 8xsz:LY (3.2) BS01 rna N/A GO:0002181 ... P61254 38942792
    909513 8xsz:LY (3.2) BS02 rna N/A GO:0002181 ... P61254 38942792
    909514 8xsz:LZ (3.2) BS01 rna N/A GO:0002181 ... P61353 38942792
    909515 8xsz:La (3.2) BS01 rna N/A GO:0002181 ... P46776 38942792
    909516 8xsz:Lb (3.2) BS01 rna N/A GO:0002181 ... P47914 38942792
    909517 8xsz:Lc (3.2) BS01 rna N/A GO:0002181 ... P62888 38942792
    909518 8xsz:Lc (3.2) BS02 rna N/A GO:0002181 ... P62888 38942792
    909519 8xsz:Lc (3.2) BS03 peptide N/A GO:0002181 ... P62888 38942792
    909520 8xsz:Ld (3.2) BS01 rna N/A GO:0002181 ... P62899 38942792
    909521 8xsz:Le (3.2) BS01 rna N/A GO:0002181 ... P62910 38942792
    909522 8xsz:Le (3.2) BS02 MG N/A GO:0002181 ... P62910 38942792
    909523 8xsz:Lf (3.2) BS01 rna N/A GO:0000049 ... P18077 38942792
    909524 8xsz:Lg (3.2) BS01 rna N/A GO:0002181 ... P49207 38942792
    909525 8xsz:Lg (3.2) BS02 MG N/A GO:0002181 ... P49207 38942792
    909526 8xsz:Lg (3.2) BS03 ZN N/A GO:0002181 ... P49207 38942792
    909527 8xsz:Lh (3.2) BS01 rna N/A GO:0000463 ... P42766 38942792
    909528 8xsz:Lh (3.2) BS02 rna N/A GO:0000463 ... P42766 38942792
    909529 8xsz:Li (3.2) BS01 rna N/A GO:0002181 ... Q9Y3U8 38942792
    909530 8xsz:Lj (3.2) BS01 rna N/A GO:0002181 ... P61927 38942792
    909531 8xsz:Lj (3.2) BS02 rna N/A GO:0002181 ... P61927 38942792
    909532 8xsz:Lj (3.2) BS03 ZN N/A GO:0002181 ... P61927 38942792
    909533 8xsz:Lk (3.2) BS01 rna N/A GO:0001501 ... P63173 38942792
    909534 8xsz:Ll (3.2) BS01 rna N/A GO:0002181 ... P62891 38942792
    909535 8xsz:Ll (3.2) BS02 rna N/A GO:0002181 ... P62891 38942792
    909536 8xsz:Lm (3.2) BS01 rna N/A GO:0002181 ... P62987 38942792
    909537 8xsz:Lm (3.2) BS02 ZN N/A GO:0002181 ... P62987 38942792
    909538 8xsz:Lo (3.2) BS01 rna N/A GO:0002181 ... P83881 38942792
    909539 8xsz:Lo (3.2) BS02 rna N/A GO:0002181 ... P83881 38942792
    909540 8xsz:Lo (3.2) BS03 ZN N/A GO:0002181 ... P83881 38942792
    909541 8xsz:Lp (3.2) BS01 rna N/A GO:0002181 ... P61513 38942792
    909542 8xsz:Lp (3.2) BS02 rna N/A GO:0002181 ... P61513 38942792
    909543 8xsz:Lp (3.2) BS03 ZN N/A GO:0002181 ... P61513 38942792
    909544 8xsz:Lr (3.2) BS01 rna N/A GO:0002181 ... P46779 38942792
    909545 8xsz:Ls (3.2) BS01 rna N/A GO:0002181 ... P05388 38942792
    909546 8xsz:Lt (3.2) BS01 rna N/A GO:0002181 ... P30050 38942792
    909547 8xsz:SA (3.2) BS01 rna N/A GO:0000028 ... P08865 38942792
    909548 8xsz:SB (3.2) BS01 rna N/A GO:0002181 ... P61247 38942792
    909549 8xsz:SB (3.2) BS02 rna N/A GO:0002181 ... P61247 38942792
    909550 8xsz:SC (3.2) BS01 rna N/A GO:0002181 ... P15880 38942792
    909551 8xsz:SD (3.2) BS01 rna N/A GO:0000977 ... P23396 38942792
    909552 8xsz:SE (3.2) BS01 rna N/A GO:0002181 ... P62701 38942792
    909553 8xsz:SF (3.2) BS01 rna N/A GO:0000028 ... P46782 38942792
    909554 8xsz:SG (3.2) BS01 rna N/A GO:0000082 ... P62753 38942792
    909555 8xsz:SH (3.2) BS01 rna N/A GO:0001843 ... P62081 38942792
    909556 8xsz:SI (3.2) BS01 rna N/A GO:0000462 ... P62241 38942792
    909557 8xsz:SI (3.2) BS02 MG N/A GO:0000462 ... P62241 38942792
    909558 8xsz:SI (3.2) BS03 MG N/A GO:0000462 ... P62241 38942792
    909559 8xsz:SJ (3.2) BS01 rna N/A GO:0002181 ... P46781 38942792
    909560 8xsz:SK (3.2) BS01 rna N/A GO:0002181 ... P46783 38942792
    909561 8xsz:SL (3.2) BS01 rna N/A GO:0002181 ... P62280 38942792
    909562 8xsz:SM (3.2) BS01 rna N/A GO:0002181 ... P25398 38942792
    909563 8xsz:SM (3.2) BS02 ZN N/A GO:0002181 ... P25398 38942792
    909564 8xsz:SN (3.2) BS01 rna N/A GO:0002181 ... P62277 38942792
    909565 8xsz:SN (3.2) BS02 rna N/A GO:0002181 ... P62277 38942792
    909566 8xsz:SO (3.2) BS01 rna N/A GO:0000028 ... P62263 38942792
    909567 8xsz:SP (3.2) BS01 rna N/A GO:0000028 ... P62841 38942792
    909568 8xsz:SP (3.2) BS02 rna N/A GO:0000028 ... P62841 38942792
    909569 8xsz:SQ (3.2) BS01 rna N/A GO:0000462 ... P62249 38942792
    909570 8xsz:SR (3.2) BS01 rna N/A GO:0002181 ... P08708 38942792
    909571 8xsz:SS (3.2) BS01 rna N/A GO:0002181 ... P62269 38942792
    909572 8xsz:ST (3.2) BS01 rna N/A GO:0000028 ... P39019 38942792
    909573 8xsz:SU (3.2) BS01 rna N/A GO:0002181 ... P60866 38942792
    909574 8xsz:SW (3.2) BS01 rna N/A GO:0002181 ... P62244 38942792
    909575 8xsz:SX (3.2) BS01 rna N/A GO:0002181 ... P62266 38942792
    909576 8xsz:SY (3.2) BS01 rna N/A GO:0002181 ... P62847 38942792
    909577 8xsz:SZ (3.2) BS01 rna N/A GO:0002181 ... P62851 38942792
    909578 8xsz:Sa (3.2) BS01 rna N/A GO:0002181 ... P62854 38942792
    909579 8xsz:Sb (3.2) BS01 rna N/A GO:0000028 ... P42677 38942792
    909580 8xsz:Sc (3.2) BS01 rna N/A GO:0000028 ... P62857 38942792
    909581 8xsz:Sd (3.2) BS01 rna N/A GO:0002181 ... P62273 38942792
    909582 8xsz:Se (3.2) BS01 rna N/A GO:0003735 ... P62861 38942792
    909583 8xsz:Sf (3.2) BS01 rna N/A GO:0002181 ... P62979 38942792
    909584 8xsz:Sg (3.2) BS01 rna N/A GO:0001891 ... P63244 38942792
    909585 8xt0:L3 (3.2) BS01 rna N/A GO:0005515 ... Q96EL3 38942792
    909586 8xt0:L4 (3.2) BS01 rna N/A GO:0003723 ... Q6P161 38942792
    909587 8xt0:L6 (3.2) BS01 rna N/A GO:0003735 ... Q9BQC6 38942792
    909588 8xt0:L8 (3.2) BS01 rna N/A GO:0005515 ... Q8TAE8 38942792
    909589 8xt0:LB (3.2) BS01 rna N/A GO:0003723 ... Q5T653 38942792
    909590 8xt0:LB (3.2) BS02 MG N/A GO:0003723 ... Q5T653 38942792
    909591 8xt0:LC (3.2) BS01 rna N/A GO:0003723 ... P09001 38942792
    909592 8xt0:LD (3.2) BS01 rna N/A GO:0003723 ... Q9BYD3 38942792
    909593 8xt0:LI (3.2) BS01 rna N/A GO:0003723 ... Q9BYD2 38942792
    909594 8xt0:LJ (3.2) BS01 rna N/A GO:0003723 ... Q7Z7H8 38942792
    909595 8xt0:LK (3.2) BS01 rna N/A GO:0003723 ... Q9Y3B7 38942792
    909596 8xt0:LM (3.2) BS01 rna N/A GO:0003723 ... Q9BYD1 38942792
    909597 8xt0:LN (3.2) BS01 rna N/A GO:0003723 ... Q6P1L8 38942792
    909598 8xt0:LO (3.2) BS01 rna N/A GO:0003723 ... Q9P015 38942792
    909599 8xt0:LP (3.2) BS01 rna N/A GO:0003735 ... Q9NX20 38942792
    909600 8xt0:LQ (3.2) BS01 rna N/A GO:0003735 ... Q9NRX2 38942792

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).