SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    909801 8wgh:J (2.4) BS03 CLA N/A GO:0009522 ... Q3C1K9 39060282
    909802 8wgh:J (2.4) BS04 CLA N/A GO:0009522 ... Q3C1K9 39060282
    909803 8wgh:J (2.4) BS05 CLA N/A GO:0009522 ... Q3C1K9 39060282
    909804 8wgh:K (2.4) BS01 CLA N/A GO:0009522 ... N/A 39060282
    909805 8wgh:K (2.4) BS02 CLA N/A GO:0009522 ... N/A 39060282
    909806 8wgh:K (2.4) BS03 CLA N/A GO:0009522 ... N/A 39060282
    909807 8wgh:K (2.4) BS04 CLA N/A GO:0009522 ... N/A 39060282
    909808 8wgh:K (2.4) BS05 CLA N/A GO:0009522 ... N/A 39060282
    909809 8wgh:L (2.4) BS01 peptide N/A GO:0009522 ... N/A 39060282
    909810 8wgh:L (2.4) BS02 CLA N/A GO:0009522 ... N/A 39060282
    909811 8wgh:L (2.4) BS03 CLA N/A GO:0009522 ... N/A 39060282
    909812 8wgh:L (2.4) BS04 CLA N/A GO:0009522 ... N/A 39060282
    909813 8wgh:L (2.4) BS05 CLA N/A GO:0009522 ... N/A 39060282
    909814 8wgh:L (2.4) BS06 CLA N/A GO:0009522 ... N/A 39060282
    909815 8wgh:L (2.4) BS07 CLA N/A GO:0009522 ... N/A 39060282
    909816 8wgh:L (2.4) BS08 CLA N/A GO:0009522 ... N/A 39060282
    909817 8wgh:L (2.4) BS09 CLA N/A GO:0009522 ... N/A 39060282
    909818 8wgh:N (2.4) BS01 CLA N/A GO:0009522 ... N/A 39060282
    909819 8wgh:O (2.4) BS01 CLA N/A N/A N/A 39060282
    909820 8wgh:O (2.4) BS02 CLA N/A N/A N/A 39060282
    909821 8wgh:O (2.4) BS03 CLA N/A N/A N/A 39060282
    909822 8wgh:O (2.4) BS04 CLA N/A N/A N/A 39060282
    909823 8wgh:O (2.4) BS05 CLA N/A N/A N/A 39060282
    909824 8wgm:A (2.15) BS01 NDP N/A GO:0004146 ... P13922 39250850
    909825 8wgm:A (2.15) BS02 UMP N/A GO:0004146 ... P13922 39250850
    909826 8wgm:A (2.15) BS03 WCQ N/A GO:0004146 ... P13922 39250850
    909827 8wgm:A (2.15) BS04 UMP N/A GO:0004146 ... P13922 39250850
    909828 8wgm:B (2.15) BS01 UMP N/A GO:0004146 ... P13922 39250850
    909829 8wgm:B (2.15) BS02 NDP N/A GO:0004146 ... P13922 39250850
    909830 8wgm:B (2.15) BS03 UMP N/A GO:0004146 ... P13922 39250850
    909831 8wgm:B (2.15) BS04 WCQ N/A GO:0004146 ... P13922 39250850
    909832 8wgn:A (2.0) BS01 NDP N/A GO:0000900 ... P00374 39250850
    909833 8wgn:A (2.0) BS02 WCQ N/A GO:0000900 ... P00374 39250850
    909834 8wgo:A (3.7) BS01 peptide N/A GO:0004672 ... A0A0H2ZMF7 39154050
    909835 8wgo:A (3.7) BS02 GSP N/A GO:0004672 ... A0A0H2ZMF7 39154050
    909836 8wgo:A (3.7) BS03 PO4 N/A GO:0004672 ... A0A0H2ZMF7 39154050
    909837 8wgo:B (3.7) BS01 PO4 N/A GO:0004672 ... A0A0H2ZMF7 39154050
    909838 8wgr:A (2.75) BS01 DSM N/A GO:0003779 ... P23975 39048818
    909839 8wgr:A (2.75) BS02 DSM N/A GO:0003779 ... P23975 39048818
    909840 8wgr:A (2.75) BS03 K N/A GO:0003779 ... P23975 39048818
    909841 8wgs:A (1.801) BS01 WGH ? N/A P02766 38670538
    909842 8wgs:B (1.801) BS01 WGH ? N/A P02766 38670538
    909843 8wgt:A (1.696) BS01 WGJ ? N/A P02766 38670538
    909844 8wgt:B (1.696) BS01 WGJ ? N/A P02766 38670538
    909845 8wgu:A (1.508) BS01 WH0 ? N/A P02766 38670538
    909846 8wgu:B (1.508) BS01 WH0 ? N/A P02766 38670538
    909847 8wgx:A (3.47) BS01 LNR N/A GO:0003779 ... P23975 39048818
    909848 8wgx:A (3.47) BS02 LNR N/A GO:0003779 ... P23975 39048818
    909849 8wgy:A (2.91) BS01 dna N/A GO:0000166 ... A0A7H0DN89 39167653
    909850 8wgy:A (2.91) BS02 ANP N/A GO:0000166 ... A0A7H0DN89 39167653
    909851 8wgy:B (2.91) BS01 dna N/A GO:0000166 ... A0A7H0DN89 39167653
    909852 8wgy:B (2.91) BS02 ANP N/A GO:0000166 ... A0A7H0DN89 39167653
    909853 8wgy:C (2.91) BS01 dna N/A GO:0000166 ... A0A7H0DN89 39167653
    909854 8wgy:C (2.91) BS02 ANP N/A GO:0000166 ... A0A7H0DN89 39167653
    909855 8wgy:C (2.91) BS03 ANP N/A GO:0000166 ... A0A7H0DN89 39167653
    909856 8wgy:D (2.91) BS01 ZN N/A GO:0000166 ... A0A7H0DN89 39167653
    909857 8wgy:E (2.91) BS01 ANP N/A GO:0000166 ... A0A7H0DN89 39167653
    909858 8wgy:E (2.91) BS02 ZN N/A GO:0000166 ... A0A7H0DN89 39167653
    909859 8wgy:F (2.91) BS01 ANP N/A GO:0000166 ... A0A7H0DN89 39167653
    909860 8wgz:C (3.22) BS01 dna N/A GO:0000166 ... A0A7H0DN89 39167653
    909861 8wh0:A (2.51) BS01 dna N/A GO:0000166 ... A0A7H0DN89 39167653
    909862 8wh0:A (2.51) BS02 ANP N/A GO:0000166 ... A0A7H0DN89 39167653
    909863 8wh0:B (2.51) BS01 dna N/A GO:0000166 ... A0A7H0DN89 39167653
    909864 8wh0:B (2.51) BS02 ANP N/A GO:0000166 ... A0A7H0DN89 39167653
    909865 8wh0:B (2.51) BS03 ANP N/A GO:0000166 ... A0A7H0DN89 39167653
    909866 8wh0:C (2.51) BS01 ANP N/A GO:0000166 ... A0A7H0DN89 39167653
    909867 8wh0:D (2.51) BS01 ANP N/A GO:0000166 ... A0A7H0DN89 39167653
    909868 8wh0:F (2.51) BS01 dna N/A GO:0000166 ... A0A7H0DN89 39167653
    909869 8wh0:F (2.51) BS02 ANP N/A GO:0000166 ... A0A7H0DN89 39167653
    909870 8wh2:A (2.9) BS01 dna N/A GO:0000166 ... A0A7H0DN89 39167653
    909871 8wh2:A (2.9) BS02 ATP N/A GO:0000166 ... A0A7H0DN89 39167653
    909872 8wh2:B (2.9) BS01 dna N/A GO:0000166 ... A0A7H0DN89 39167653
    909873 8wh2:B (2.9) BS02 ATP N/A GO:0000166 ... A0A7H0DN89 39167653
    909874 8wh2:D (2.9) BS01 dna N/A GO:0000166 ... A0A7H0DN89 39167653
    909875 8wh2:D (2.9) BS02 ADP N/A GO:0000166 ... A0A7H0DN89 39167653
    909876 8wh2:F (2.9) BS01 dna N/A GO:0000166 ... A0A7H0DN89 39167653
    909877 8wh2:F (2.9) BS02 ATP N/A GO:0000166 ... A0A7H0DN89 39167653
    909878 8wh2:F (2.9) BS03 ADP N/A GO:0000166 ... A0A7H0DN89 39167653
    909879 8wh4:B (3.03) BS01 dna N/A GO:0000166 ... A0A7H0DN89 39167653
    909880 8wh4:C (3.03) BS01 dna N/A GO:0000166 ... A0A7H0DN89 39167653
    909881 8wh4:F (3.03) BS01 dna N/A GO:0000166 ... A0A7H0DN89 39167653
    909882 8wh5:A (3.58) BS01 dna ? GO:0000786 ... P59226 38413824
    909883 8wh5:A (3.58) BS02 dna ? GO:0000786 ... P59226 38413824
    909884 8wh5:B (3.58) BS01 dna ? GO:0000325 ... P59259 38413824
    909885 8wh5:B (3.58) BS02 dna ? GO:0000325 ... P59259 38413824
    909886 8wh5:C (3.58) BS01 dna ? GO:0000786 ... Q9LD28 38413824
    909887 8wh5:C (3.58) BS02 dna ? GO:0000786 ... Q9LD28 38413824
    909888 8wh5:D (3.58) BS01 dna ? GO:0000786 ... O23629 38413824
    909889 8wh5:E (3.58) BS01 dna ? GO:0000786 ... P59226 38413824
    909890 8wh5:F (3.58) BS01 dna ? GO:0000325 ... P59259 38413824
    909891 8wh5:F (3.58) BS02 dna ? GO:0000325 ... P59259 38413824
    909892 8wh5:G (3.58) BS01 dna ? GO:0000786 ... Q9LD28 38413824
    909893 8wh5:G (3.58) BS02 dna ? GO:0000786 ... Q9LD28 38413824
    909894 8wh5:H (3.58) BS01 dna ? GO:0000786 ... O23629 38413824
    909895 8wh5:K (3.58) BS01 dna 3.6.4.12 GO:0000785 ... Q9XFH4 38413824
    909896 8wh5:K (3.58) BS02 dna 3.6.4.12 GO:0000785 ... Q9XFH4 38413824
    909897 8wh6:A (3.27) BS01 ADP N/A GO:0000166 ... A0A7H0DN89 39167653
    909898 8wh6:B (3.27) BS01 ADP N/A GO:0000166 ... A0A7H0DN89 39167653
    909899 8wh6:C (3.27) BS01 dna N/A GO:0000166 ... A0A7H0DN89 39167653
    909900 8wh6:C (3.27) BS02 ADP N/A GO:0000166 ... A0A7H0DN89 39167653
    909901 8wh6:D (3.27) BS01 ADP N/A GO:0000166 ... A0A7H0DN89 39167653
    909902 8wh6:D (3.27) BS02 ZN N/A GO:0000166 ... A0A7H0DN89 39167653
    909903 8wh6:E (3.27) BS01 ZN N/A GO:0000166 ... A0A7H0DN89 39167653
    909904 8wh8:A (3.6) BS01 dna ? GO:0000786 ... P59226 38413824
    909905 8wh8:A (3.6) BS02 dna ? GO:0000786 ... P59226 38413824
    909906 8wh8:B (3.6) BS01 dna ? GO:0000325 ... P59259 38413824
    909907 8wh8:B (3.6) BS02 dna ? GO:0000325 ... P59259 38413824
    909908 8wh8:C (3.6) BS01 dna ? GO:0000786 ... Q9LD28 38413824
    909909 8wh8:C (3.6) BS02 dna ? GO:0000786 ... Q9LD28 38413824
    909910 8wh8:D (3.6) BS01 dna ? GO:0000786 ... O23629 38413824
    909911 8wh8:D (3.6) BS02 dna ? GO:0000786 ... O23629 38413824
    909912 8wh8:E (3.6) BS01 dna ? GO:0000786 ... P59226 38413824
    909913 8wh8:F (3.6) BS01 dna ? GO:0000325 ... P59259 38413824
    909914 8wh8:F (3.6) BS02 dna ? GO:0000325 ... P59259 38413824
    909915 8wh8:G (3.6) BS01 dna ? GO:0000786 ... Q9LD28 38413824
    909916 8wh8:G (3.6) BS02 dna ? GO:0000786 ... Q9LD28 38413824
    909917 8wh8:H (3.6) BS01 dna ? GO:0000786 ... O23629 38413824
    909918 8wh8:K (3.6) BS01 dna 3.6.4.12 GO:0000785 ... Q9XFH4 38413824
    909919 8wh8:K (3.6) BS02 dna 3.6.4.12 GO:0000785 ... Q9XFH4 38413824
    909920 8wh8:K (3.6) BS03 ADP 3.6.4.12 GO:0000785 ... Q9XFH4 38413824
    909921 8wh9:A (3.31) BS01 dna ? GO:0000786 ... P59226 38413824
    909922 8wh9:A (3.31) BS02 dna ? GO:0000786 ... P59226 38413824
    909923 8wh9:B (3.31) BS01 dna ? GO:0000325 ... P59259 38413824
    909924 8wh9:B (3.31) BS02 dna ? GO:0000325 ... P59259 38413824
    909925 8wh9:C (3.31) BS01 dna ? GO:0000786 ... Q9LD28 38413824
    909926 8wh9:C (3.31) BS02 dna ? GO:0000786 ... Q9LD28 38413824
    909927 8wh9:D (3.31) BS01 dna ? GO:0000786 ... O23629 38413824
    909928 8wh9:D (3.31) BS02 dna ? GO:0000786 ... O23629 38413824
    909929 8wh9:E (3.31) BS01 dna ? GO:0000786 ... P59226 38413824
    909930 8wh9:E (3.31) BS02 dna ? GO:0000786 ... P59226 38413824
    909931 8wh9:F (3.31) BS01 dna ? GO:0000325 ... P59259 38413824
    909932 8wh9:G (3.31) BS01 dna ? GO:0000786 ... Q9LD28 38413824
    909933 8wh9:G (3.31) BS02 dna ? GO:0000786 ... Q9LD28 38413824
    909934 8wh9:H (3.31) BS01 dna ? GO:0000786 ... O23629 38413824
    909935 8wh9:H (3.31) BS02 dna ? GO:0000786 ... O23629 38413824
    909936 8wh9:K (3.31) BS01 dna 3.6.4.12 GO:0000785 ... Q9XFH4 38413824
    909937 8wh9:K (3.31) BS02 dna 3.6.4.12 GO:0000785 ... Q9XFH4 38413824
    909938 8wh9:K (3.31) BS03 ADP 3.6.4.12 GO:0000785 ... Q9XFH4 38413824
    909939 8wha:A (4.05) BS01 dna ? GO:0000786 ... P59226 38413824
    909940 8wha:A (4.05) BS02 dna ? GO:0000786 ... P59226 38413824
    909941 8wha:B (4.05) BS01 dna ? GO:0000325 ... P59259 38413824
    909942 8wha:B (4.05) BS02 dna ? GO:0000325 ... P59259 38413824
    909943 8wha:C (4.05) BS01 dna ? GO:0000786 ... Q9LD28 38413824
    909944 8wha:C (4.05) BS02 dna ? GO:0000786 ... Q9LD28 38413824
    909945 8wha:D (4.05) BS01 dna ? GO:0000786 ... O23629 38413824
    909946 8wha:D (4.05) BS02 dna ? GO:0000786 ... O23629 38413824
    909947 8wha:E (4.05) BS01 dna ? GO:0000786 ... P59226 38413824
    909948 8wha:E (4.05) BS02 dna ? GO:0000786 ... P59226 38413824
    909949 8wha:F (4.05) BS01 dna ? GO:0000325 ... P59259 38413824
    909950 8wha:G (4.05) BS01 dna ? GO:0000786 ... Q9LD28 38413824
    909951 8wha:G (4.05) BS02 dna ? GO:0000786 ... Q9LD28 38413824
    909952 8wha:H (4.05) BS01 dna ? GO:0000786 ... O23629 38413824
    909953 8wha:H (4.05) BS02 dna ? GO:0000786 ... O23629 38413824
    909954 8wha:K (4.05) BS01 dna 3.6.4.12 GO:0000785 ... Q9XFH4 38413824
    909955 8wha:K (4.05) BS02 dna 3.6.4.12 GO:0000785 ... Q9XFH4 38413824
    909956 8wha:K (4.05) BS03 ADP 3.6.4.12 GO:0000785 ... Q9XFH4 38413824
    909957 8wha:L (4.05) BS01 dna 3.6.4.12 GO:0000785 ... Q9XFH4 38413824
    909958 8wha:L (4.05) BS02 dna 3.6.4.12 GO:0000785 ... Q9XFH4 38413824
    909959 8wha:L (4.05) BS03 BEF 3.6.4.12 GO:0000785 ... Q9XFH4 38413824
    909960 8wha:L (4.05) BS04 ADP 3.6.4.12 GO:0000785 ... Q9XFH4 38413824
    909961 8whb:A (3.17) BS01 dna ? GO:0000786 ... P59226 38413824
    909962 8whb:A (3.17) BS02 dna ? GO:0000786 ... P59226 38413824
    909963 8whb:B (3.17) BS01 dna ? GO:0000325 ... P59259 38413824
    909964 8whb:C (3.17) BS01 dna ? GO:0000786 ... Q9LD28 38413824
    909965 8whb:C (3.17) BS02 dna ? GO:0000786 ... Q9LD28 38413824
    909966 8whb:D (3.17) BS01 dna ? GO:0000786 ... O23629 38413824
    909967 8whb:D (3.17) BS02 dna ? GO:0000786 ... O23629 38413824
    909968 8whb:E (3.17) BS01 dna ? GO:0000786 ... P59226 38413824
    909969 8whb:E (3.17) BS02 dna ? GO:0000786 ... P59226 38413824
    909970 8whb:F (3.17) BS01 dna ? GO:0000325 ... P59259 38413824
    909971 8whb:F (3.17) BS02 dna ? GO:0000325 ... P59259 38413824
    909972 8whb:G (3.17) BS01 dna ? GO:0000786 ... Q9LD28 38413824
    909973 8whb:G (3.17) BS02 dna ? GO:0000786 ... Q9LD28 38413824
    909974 8whb:H (3.17) BS01 dna ? GO:0000786 ... O23629 38413824
    909975 8whb:H (3.17) BS02 dna ? GO:0000786 ... O23629 38413824
    909976 8whg:B (2.71) BS01 NAP N/A GO:0016491 ... D9X416 N/A
    909977 8whg:E (2.71) BS01 NAP N/A GO:0016491 ... D9X416 N/A
    909978 8whg:F (2.71) BS01 NAP N/A GO:0016491 ... D9X416 N/A
    909979 8who:A (1.892) BS01 CO N/A GO:0003868 ... P93836 N/A
    909980 8who:A (1.892) BS02 WHO N/A GO:0003868 ... P93836 N/A
    909981 8whp:A (1.919) BS01 CO N/A GO:0003868 ... P93836 N/A
    909982 8whp:A (1.919) BS02 WI0 N/A GO:0003868 ... P93836 N/A
    909983 8whq:A (1.695) BS01 CO N/A GO:0003868 ... P93836 N/A
    909984 8whq:A (1.695) BS02 WI9 N/A GO:0003868 ... P93836 N/A
    909985 8whs:D (3.33) BS01 ZN N/A GO:0006508 ... Q9BYF1 39071099
    909986 8whu:D (3.3) BS01 ZN N/A GO:0006508 ... Q9BYF1 39071099
    909987 8whu:E (3.3) BS01 ZN N/A GO:0006508 ... Q9BYF1 39071099
    909988 8whx:1 (2.8) BS01 rna ? GO:0003735 ... A0QV03 38245551
    909989 8whx:2 (2.8) BS01 rna ? GO:0003735 ... A0QSD9 38245551
    909990 8whx:3 (2.8) BS01 rna ? GO:0003735 ... A0QSG7 38245551
    909991 8whx:3 (2.8) BS02 rna ? GO:0003735 ... A0QSG7 38245551
    909992 8whx:4 (2.8) BS01 rna ? GO:0003735 ... A0R215 38245551
    909993 8whx:5 (2.8) BS01 rna ? GO:0003735 ... A0R3I9 38245551
    909994 8whx:6 (2.8) BS01 rna ? GO:0003735 ... A0QS39 38245551
    909995 8whx:7 (2.8) BS01 rna ? GO:0003735 ... A0R7K0 38245551
    909996 8whx:8 (2.8) BS01 rna ? GO:0003735 ... A0QYU7 38245551
    909997 8whx:E (2.8) BS01 rna ? GO:0002181 ... A0QSD4 38245551
    909998 8whx:F (2.8) BS01 rna ? GO:0003735 ... A0QSD1 38245551
    909999 8whx:G (2.8) BS01 rna ? GO:0003735 ... A0QSD2 38245551
    910000 8whx:H (2.8) BS01 rna ? GO:0000049 ... A0QSG1 38245551

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).