SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 4541 4542 4543 4544 4545 4546 4547 4548 4549 4550 4551 4552 4553 4554 4555 4556 4557 4558 4559 4560 4561 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    910001 8whx:H (2.8) BS02 rna ? GO:0000049 ... A0QSG1 38245551
    910002 8whx:I (2.8) BS01 rna ? GO:0002181 ... A0QSG4 38245551
    910003 8whx:J (2.8) BS01 rna ? GO:0003735 ... A0R7F6 38245551
    910004 8whx:M (2.8) BS01 rna ? GO:0003729 ... A0QSP8 38245551
    910005 8whx:N (2.8) BS01 rna ? GO:0003735 ... A0QSF9 38245551
    910006 8whx:N (2.8) BS02 rna ? GO:0003735 ... A0QSF9 38245551
    910007 8whx:O (2.8) BS01 rna ? GO:0003735 ... A0QSG8 38245551
    910008 8whx:Q (2.8) BS01 rna ? GO:0003735 ... A0QSL9 38245551
    910009 8whx:R (2.8) BS01 rna ? GO:0003735 ... A0QSG5 38245551
    910010 8whx:R (2.8) BS02 rna ? GO:0003735 ... A0QSG5 38245551
    910011 8whx:S (2.8) BS01 rna ? GO:0003735 ... A0QV42 38245551
    910012 8whx:S (2.8) BS02 rna ? GO:0003735 ... A0QV42 38245551
    910013 8whx:T (2.8) BS01 rna ? GO:0000027 ... A0QYU6 38245551
    910014 8whx:U (2.8) BS01 rna ? GO:0003723 ... A0R151 38245551
    910015 8whx:V (2.8) BS01 rna ? GO:0003735 ... A0QSD6 38245551
    910016 8whx:W (2.8) BS01 rna ? GO:0003735 ... A0QSD3 38245551
    910017 8whx:X (2.8) BS01 rna ? GO:0003723 ... A0QSG0 38245551
    910018 8whx:Z (2.8) BS01 rna ? GO:0003735 ... A0R150 38245551
    910019 8whx:c (2.8) BS01 rna ? GO:0003735 ... A0QVB8 38245551
    910020 8whx:d (2.8) BS01 rna ? GO:0003676 ... A0QSD7 38245551
    910021 8whx:e (2.8) BS01 rna ? GO:0003723 ... A0QSL7 38245551
    910022 8whx:f (2.8) BS01 rna ? GO:0003723 ... A0QSG6 38245551
    910023 8whx:g (2.8) BS01 rna ? GO:0003735 ... A0R7F9 38245551
    910024 8whx:g (2.8) BS02 rna ? GO:0003735 ... A0R7F9 38245551
    910025 8whx:h (2.8) BS01 rna ? GO:0000049 ... A0QS97 38245551
    910026 8whx:i (2.8) BS01 rna ? GO:0003735 ... A0QSG3 38245551
    910027 8whx:j (2.8) BS01 rna ? GO:0003723 ... A0QSP9 38245551
    910028 8whx:k (2.8) BS01 rna ? GO:0000049 ... A0QSD0 38245551
    910029 8whx:l (2.8) BS01 rna ? GO:0003735 ... A0QSL6 38245551
    910030 8whx:m (2.8) BS01 rna ? GO:0000049 ... A0QS96 38245551
    910031 8whx:n (2.8) BS01 rna ? GO:0000049 ... A0QSL5 38245551
    910032 8whx:o (2.8) BS01 rna ? GO:0003735 ... A0R550 38245551
    910033 8whx:p (2.8) BS01 rna ? GO:0003735 ... A0QVQ3 38245551
    910034 8whx:p (2.8) BS02 rna ? GO:0003735 ... A0QVQ3 38245551
    910035 8whx:q (2.8) BS01 rna ? GO:0003735 ... A0QV37 38245551
    910036 8whx:r (2.8) BS01 rna ? GO:0003735 ... A0QSE0 38245551
    910037 8whx:s (2.8) BS01 rna ? GO:0003735 ... A0R7F7 38245551
    910038 8whx:t (2.8) BS01 rna ? GO:0000028 ... A0QSD5 38245551
    910039 8whx:u (2.8) BS01 rna ? GO:0003723 ... A0R102 38245551
    910040 8whx:v (2.8) BS01 rna ? N/A A0QR10 38245551
    910041 8whx:w (2.8) BS01 rna ? GO:0022627 ... A0QZ86 38245551
    910042 8why:1 (2.7) BS01 rna ? GO:0003735 ... A0QV03 38245551
    910043 8why:2 (2.7) BS01 rna ? GO:0003735 ... A0QSD9 38245551
    910044 8why:3 (2.7) BS01 rna ? GO:0003735 ... A0QSG7 38245551
    910045 8why:3 (2.7) BS02 rna ? GO:0003735 ... A0QSG7 38245551
    910046 8why:4 (2.7) BS01 rna ? GO:0003735 ... A0R215 38245551
    910047 8why:5 (2.7) BS01 rna ? GO:0003735 ... A0R3I9 38245551
    910048 8why:6 (2.7) BS01 rna ? GO:0003735 ... A0QS39 38245551
    910049 8why:7 (2.7) BS01 rna ? GO:0003735 ... A0R7K0 38245551
    910050 8why:8 (2.7) BS01 rna ? GO:0003735 ... A0QYU7 38245551
    910051 8why:E (2.7) BS01 rna ? GO:0002181 ... A0QSD4 38245551
    910052 8why:F (2.7) BS01 rna ? GO:0003735 ... A0QSD1 38245551
    910053 8why:G (2.7) BS01 rna ? GO:0003735 ... A0QSD2 38245551
    910054 8why:H (2.7) BS01 rna ? GO:0000049 ... A0QSG1 38245551
    910055 8why:H (2.7) BS02 rna ? GO:0000049 ... A0QSG1 38245551
    910056 8why:I (2.7) BS01 rna ? GO:0002181 ... A0QSG4 38245551
    910057 8why:J (2.7) BS01 rna ? GO:0003735 ... A0R7F6 38245551
    910058 8why:M (2.7) BS01 rna ? GO:0003729 ... A0QSP8 38245551
    910059 8why:N (2.7) BS01 rna ? GO:0003735 ... A0QSF9 38245551
    910060 8why:O (2.7) BS01 rna ? GO:0003735 ... A0QSG8 38245551
    910061 8why:Q (2.7) BS01 rna ? GO:0003735 ... A0QSL9 38245551
    910062 8why:R (2.7) BS01 rna ? GO:0003735 ... A0QSG5 38245551
    910063 8why:R (2.7) BS02 rna ? GO:0003735 ... A0QSG5 38245551
    910064 8why:S (2.7) BS01 rna ? GO:0003735 ... A0QV42 38245551
    910065 8why:T (2.7) BS01 rna ? GO:0000027 ... A0QYU6 38245551
    910066 8why:U (2.7) BS01 rna ? GO:0003723 ... A0R151 38245551
    910067 8why:V (2.7) BS01 rna ? GO:0003735 ... A0QSD6 38245551
    910068 8why:W (2.7) BS01 rna ? GO:0003735 ... A0QSD3 38245551
    910069 8why:X (2.7) BS01 rna ? GO:0003723 ... A0QSG0 38245551
    910070 8why:Z (2.7) BS01 rna ? GO:0003735 ... A0R150 38245551
    910071 8why:Z (2.7) BS02 rna ? GO:0003735 ... A0R150 38245551
    910072 8whz:A (3.93) BS01 ZN N/A GO:0006508 ... Q9BYF1 39071099
    910073 8wi0:A (2.93) BS01 peptide N/A GO:0005524 ... O15440 38844452
    910074 8wi2:A (4.06) BS01 peptide N/A GO:0005524 ... O15440 38844452
    910075 8wi5:A (3.46) BS01 peptide N/A GO:0005524 ... O15440 38844452
    910076 8wi6:A (1.916) BS01 CO N/A GO:0003868 ... P93836 N/A
    910077 8wi6:A (1.916) BS02 N1K N/A GO:0003868 ... P93836 N/A
    910078 8wi7:1 (3.5) BS01 rna ? GO:0003735 ... A0QV03 38245551
    910079 8wi7:2 (3.5) BS01 rna ? GO:0003735 ... A0QSD9 38245551
    910080 8wi7:3 (3.5) BS01 rna ? GO:0003735 ... A0QSG7 38245551
    910081 8wi7:3 (3.5) BS02 rna ? GO:0003735 ... A0QSG7 38245551
    910082 8wi7:4 (3.5) BS01 rna ? GO:0003735 ... A0R215 38245551
    910083 8wi7:5 (3.5) BS01 rna ? GO:0003735 ... A0R3I9 38245551
    910084 8wi7:6 (3.5) BS01 rna ? GO:0003735 ... A0QS39 38245551
    910085 8wi7:7 (3.5) BS01 rna ? GO:0003735 ... A0R7K0 38245551
    910086 8wi7:8 (3.5) BS01 rna ? GO:0003735 ... A0QYU7 38245551
    910087 8wi7:E (3.5) BS01 rna ? GO:0002181 ... A0QSD4 38245551
    910088 8wi7:F (3.5) BS01 rna ? GO:0003735 ... A0QSD1 38245551
    910089 8wi7:G (3.5) BS01 rna ? GO:0003735 ... A0QSD2 38245551
    910090 8wi7:H (3.5) BS01 rna ? GO:0000049 ... A0QSG1 38245551
    910091 8wi7:H (3.5) BS02 rna ? GO:0000049 ... A0QSG1 38245551
    910092 8wi7:I (3.5) BS01 rna ? GO:0002181 ... A0QSG4 38245551
    910093 8wi7:M (3.5) BS01 rna ? GO:0003729 ... A0QSP8 38245551
    910094 8wi7:N (3.5) BS01 rna ? GO:0003735 ... A0QSF9 38245551
    910095 8wi7:N (3.5) BS02 rna ? GO:0003735 ... A0QSF9 38245551
    910096 8wi7:O (3.5) BS01 rna ? GO:0003735 ... A0QSG8 38245551
    910097 8wi7:Q (3.5) BS01 rna ? GO:0003735 ... A0QSL9 38245551
    910098 8wi7:R (3.5) BS01 rna ? GO:0003735 ... A0QSG5 38245551
    910099 8wi7:R (3.5) BS02 rna ? GO:0003735 ... A0QSG5 38245551
    910100 8wi7:S (3.5) BS01 rna ? GO:0003735 ... A0QV42 38245551
    910101 8wi7:S (3.5) BS02 rna ? GO:0003735 ... A0QV42 38245551
    910102 8wi7:T (3.5) BS01 rna ? GO:0000027 ... A0QYU6 38245551
    910103 8wi7:U (3.5) BS01 rna ? GO:0003723 ... A0R151 38245551
    910104 8wi7:V (3.5) BS01 rna ? GO:0003735 ... A0QSD6 38245551
    910105 8wi7:W (3.5) BS01 rna ? GO:0003735 ... A0QSD3 38245551
    910106 8wi7:X (3.5) BS01 rna ? GO:0003723 ... A0QSG0 38245551
    910107 8wi7:Z (3.5) BS01 rna ? GO:0003735 ... A0R150 38245551
    910108 8wi7:c (3.5) BS01 rna ? GO:0003735 ... A0QVB8 38245551
    910109 8wi7:d (3.5) BS01 rna ? GO:0003676 ... A0QSD7 38245551
    910110 8wi7:e (3.5) BS01 rna ? GO:0003723 ... A0QSL7 38245551
    910111 8wi7:f (3.5) BS01 rna ? GO:0003723 ... A0QSG6 38245551
    910112 8wi7:g (3.5) BS01 rna ? GO:0003735 ... A0R7F9 38245551
    910113 8wi7:g (3.5) BS02 rna ? GO:0003735 ... A0R7F9 38245551
    910114 8wi7:h (3.5) BS01 rna ? GO:0000049 ... A0QS97 38245551
    910115 8wi7:i (3.5) BS01 rna ? GO:0003735 ... A0QSG3 38245551
    910116 8wi7:j (3.5) BS01 rna ? GO:0003723 ... A0QSP9 38245551
    910117 8wi7:k (3.5) BS01 rna ? GO:0000049 ... A0QSD0 38245551
    910118 8wi7:l (3.5) BS01 rna ? GO:0003735 ... A0QSL6 38245551
    910119 8wi7:m (3.5) BS01 rna ? GO:0000049 ... A0QS96 38245551
    910120 8wi7:n (3.5) BS01 rna ? GO:0000049 ... A0QSL5 38245551
    910121 8wi7:o (3.5) BS01 rna ? GO:0003735 ... A0R550 38245551
    910122 8wi7:p (3.5) BS01 rna ? GO:0003735 ... A0QVQ3 38245551
    910123 8wi7:p (3.5) BS02 rna ? GO:0003735 ... A0QVQ3 38245551
    910124 8wi7:q (3.5) BS01 rna ? GO:0003735 ... A0QV37 38245551
    910125 8wi7:r (3.5) BS01 rna ? GO:0003735 ... A0QSE0 38245551
    910126 8wi7:s (3.5) BS01 rna ? GO:0003735 ... A0R7F7 38245551
    910127 8wi7:t (3.5) BS01 rna ? GO:0000028 ... A0QSD5 38245551
    910128 8wi7:u (3.5) BS01 rna ? GO:0003723 ... A0R102 38245551
    910129 8wi7:v (3.5) BS01 rna ? N/A A0QR10 38245551
    910130 8wi7:v (3.5) BS02 rna ? N/A A0QR10 38245551
    910131 8wi7:w (3.5) BS01 rna ? GO:0022627 ... A0QZ86 38245551
    910132 8wi8:1 (2.7) BS01 rna ? GO:0003735 ... A0QV03 38245551
    910133 8wi8:2 (2.7) BS01 rna ? GO:0003735 ... A0QSD9 38245551
    910134 8wi8:3 (2.7) BS01 rna ? GO:0003735 ... A0QSG7 38245551
    910135 8wi8:3 (2.7) BS02 rna ? GO:0003735 ... A0QSG7 38245551
    910136 8wi8:5 (2.7) BS01 rna ? GO:0003735 ... A0R3I9 38245551
    910137 8wi8:6 (2.7) BS01 rna ? GO:0003735 ... A0QS39 38245551
    910138 8wi8:7 (2.7) BS01 rna ? GO:0003735 ... A0R7K0 38245551
    910139 8wi8:8 (2.7) BS01 rna ? GO:0003735 ... A0QYU7 38245551
    910140 8wi8:E (2.7) BS01 rna ? GO:0002181 ... A0QSD4 38245551
    910141 8wi8:F (2.7) BS01 rna ? GO:0003735 ... A0QSD1 38245551
    910142 8wi8:G (2.7) BS01 rna ? GO:0003735 ... A0QSD2 38245551
    910143 8wi8:H (2.7) BS01 rna ? GO:0000049 ... A0QSG1 38245551
    910144 8wi8:H (2.7) BS02 rna ? GO:0000049 ... A0QSG1 38245551
    910145 8wi8:I (2.7) BS01 rna ? GO:0002181 ... A0QSG4 38245551
    910146 8wi8:J (2.7) BS01 rna ? GO:0003735 ... A0R7F6 38245551
    910147 8wi8:M (2.7) BS01 rna ? GO:0003729 ... A0QSP8 38245551
    910148 8wi8:N (2.7) BS01 rna ? GO:0003735 ... A0QSF9 38245551
    910149 8wi8:O (2.7) BS01 rna ? GO:0003735 ... A0QSG8 38245551
    910150 8wi8:Q (2.7) BS01 rna ? GO:0003735 ... A0QSL9 38245551
    910151 8wi8:R (2.7) BS01 rna ? GO:0003735 ... A0QSG5 38245551
    910152 8wi8:R (2.7) BS02 rna ? GO:0003735 ... A0QSG5 38245551
    910153 8wi8:S (2.7) BS01 rna ? GO:0003735 ... A0QV42 38245551
    910154 8wi8:T (2.7) BS01 rna ? GO:0000027 ... A0QYU6 38245551
    910155 8wi8:U (2.7) BS01 rna ? GO:0003723 ... A0R151 38245551
    910156 8wi8:V (2.7) BS01 rna ? GO:0003735 ... A0QSD6 38245551
    910157 8wi8:W (2.7) BS01 rna ? GO:0003735 ... A0QSD3 38245551
    910158 8wi8:X (2.7) BS01 rna ? GO:0003723 ... A0QSG0 38245551
    910159 8wi8:Z (2.7) BS01 rna ? GO:0003735 ... A0R150 38245551
    910160 8wi9:c (3.5) BS01 rna ? GO:0003735 ... A0QVB8 38245551
    910161 8wi9:d (3.5) BS01 rna ? GO:0003676 ... A0QSD7 38245551
    910162 8wi9:e (3.5) BS01 rna ? GO:0003723 ... A0QSL7 38245551
    910163 8wi9:f (3.5) BS01 rna ? GO:0003723 ... A0QSG6 38245551
    910164 8wi9:g (3.5) BS01 rna ? GO:0003735 ... A0R7F9 38245551
    910165 8wi9:h (3.5) BS01 rna ? GO:0000049 ... A0QS97 38245551
    910166 8wi9:i (3.5) BS01 rna ? GO:0003735 ... A0QSG3 38245551
    910167 8wi9:j (3.5) BS01 rna ? GO:0003723 ... A0QSP9 38245551
    910168 8wi9:k (3.5) BS01 rna ? GO:0000049 ... A0QSD0 38245551
    910169 8wi9:l (3.5) BS01 rna ? GO:0003735 ... A0QSL6 38245551
    910170 8wi9:m (3.5) BS01 rna ? GO:0000049 ... A0QS96 38245551
    910171 8wi9:n (3.5) BS01 rna ? GO:0000049 ... A0QSL5 38245551
    910172 8wi9:o (3.5) BS01 rna ? GO:0003735 ... A0QSG2 38245551
    910173 8wi9:p (3.5) BS01 rna ? GO:0003735 ... A0QVQ3 38245551
    910174 8wi9:q (3.5) BS01 rna ? GO:0003735 ... A0QV37 38245551
    910175 8wi9:r (3.5) BS01 rna ? GO:0003735 ... A0QSE0 38245551
    910176 8wi9:s (3.5) BS01 rna ? GO:0003735 ... A0R7F7 38245551
    910177 8wi9:t (3.5) BS01 rna ? GO:0000028 ... A0QSD5 38245551
    910178 8wi9:t (3.5) BS02 peptide ? GO:0000028 ... A0QSD5 38245551
    910179 8wi9:u (3.5) BS01 rna ? GO:0003723 ... A0R102 38245551
    910180 8wi9:v (3.5) BS01 rna ? N/A A0QR10 38245551
    910181 8wi9:w (3.5) BS01 rna ? GO:0022627 ... A0QZ86 38245551
    910182 8wia:A (1.96) BS01 ZN N/A GO:0000166 ... P0A8M3 39014102
    910183 8wia:B (1.96) BS01 ZN N/A GO:0000166 ... P0A8M3 39014102
    910184 8wib:1 (3.5) BS01 rna ? GO:0003735 ... A0QV03 38245551
    910185 8wib:2 (3.5) BS01 rna ? GO:0003735 ... A0QSD9 38245551
    910186 8wib:3 (3.5) BS01 rna ? GO:0003735 ... A0QSG7 38245551
    910187 8wib:4 (3.5) BS01 rna ? GO:0003735 ... A0R215 38245551
    910188 8wib:5 (3.5) BS01 rna ? GO:0003735 ... A0R3I9 38245551
    910189 8wib:6 (3.5) BS01 rna ? GO:0003735 ... A0QS39 38245551
    910190 8wib:7 (3.5) BS01 rna ? GO:0003735 ... A0R7K0 38245551
    910191 8wib:8 (3.5) BS01 rna ? GO:0003735 ... A0QYU7 38245551
    910192 8wib:E (3.5) BS01 rna ? GO:0002181 ... A0QSD4 38245551
    910193 8wib:F (3.5) BS01 rna ? GO:0003735 ... A0QSD1 38245551
    910194 8wib:G (3.5) BS01 rna ? GO:0003735 ... A0QSD2 38245551
    910195 8wib:H (3.5) BS01 rna ? GO:0000049 ... A0QSG1 38245551
    910196 8wib:H (3.5) BS02 rna ? GO:0000049 ... A0QSG1 38245551
    910197 8wib:I (3.5) BS01 rna ? GO:0002181 ... A0QSG4 38245551
    910198 8wib:J (3.5) BS01 rna ? GO:0003735 ... A0R7F6 38245551
    910199 8wib:M (3.5) BS01 rna ? GO:0003729 ... A0QSP8 38245551
    910200 8wib:N (3.5) BS01 rna ? GO:0003735 ... A0QSF9 38245551

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).