SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    910201 8wib:N (3.5) BS02 rna ? GO:0003735 ... A0QSF9 38245551
    910202 8wib:O (3.5) BS01 rna ? GO:0003735 ... A0QSG8 38245551
    910203 8wib:Q (3.5) BS01 rna ? GO:0003735 ... A0QSL9 38245551
    910204 8wib:R (3.5) BS01 rna ? GO:0003735 ... A0QSG5 38245551
    910205 8wib:R (3.5) BS02 rna ? GO:0003735 ... A0QSG5 38245551
    910206 8wib:S (3.5) BS01 rna ? GO:0003735 ... A0QV42 38245551
    910207 8wib:S (3.5) BS02 rna ? GO:0003735 ... A0QV42 38245551
    910208 8wib:T (3.5) BS01 rna ? GO:0000027 ... A0QYU6 38245551
    910209 8wib:U (3.5) BS01 rna ? GO:0003723 ... A0R151 38245551
    910210 8wib:V (3.5) BS01 rna ? GO:0003735 ... A0QSD6 38245551
    910211 8wib:W (3.5) BS01 rna ? GO:0003735 ... A0QSD3 38245551
    910212 8wib:X (3.5) BS01 rna ? GO:0003723 ... A0QSG0 38245551
    910213 8wib:Z (3.5) BS01 rna ? GO:0003735 ... A0R150 38245551
    910214 8wib:Z (3.5) BS02 rna ? GO:0003735 ... A0R150 38245551
    910215 8wib:d (3.5) BS01 rna ? GO:0003676 ... A0QSD7 38245551
    910216 8wib:e (3.5) BS01 rna ? GO:0003723 ... A0QSL7 38245551
    910217 8wib:f (3.5) BS01 rna ? GO:0003723 ... A0QSG6 38245551
    910218 8wib:g (3.5) BS01 rna ? GO:0003735 ... A0R7F9 38245551
    910219 8wib:g (3.5) BS02 rna ? GO:0003735 ... A0R7F9 38245551
    910220 8wib:h (3.5) BS01 rna ? GO:0000049 ... A0QS97 38245551
    910221 8wib:h (3.5) BS02 rna ? GO:0000049 ... A0QS97 38245551
    910222 8wib:i (3.5) BS01 rna ? GO:0003735 ... A0QSG3 38245551
    910223 8wib:j (3.5) BS01 rna ? GO:0003723 ... A0QSP9 38245551
    910224 8wib:k (3.5) BS01 rna ? GO:0000049 ... A0QSD0 38245551
    910225 8wib:l (3.5) BS01 rna ? GO:0003735 ... A0QSL6 38245551
    910226 8wib:l (3.5) BS02 rna ? GO:0003735 ... A0QSL6 38245551
    910227 8wib:m (3.5) BS01 rna ? GO:0000049 ... A0QS96 38245551
    910228 8wib:n (3.5) BS01 rna ? GO:0000049 ... A0QSL5 38245551
    910229 8wib:o (3.5) BS01 rna ? GO:0003735 ... A0R550 38245551
    910230 8wib:p (3.5) BS01 rna ? GO:0003735 ... A0QVQ3 38245551
    910231 8wib:p (3.5) BS02 rna ? GO:0003735 ... A0QVQ3 38245551
    910232 8wib:q (3.5) BS01 rna ? GO:0003735 ... A0QV37 38245551
    910233 8wib:r (3.5) BS01 rna ? GO:0003735 ... A0QSE0 38245551
    910234 8wib:s (3.5) BS01 rna ? GO:0003735 ... A0R7F7 38245551
    910235 8wib:t (3.5) BS01 rna ? GO:0000028 ... A0QSD5 38245551
    910236 8wib:u (3.5) BS01 rna ? GO:0003723 ... A0R102 38245551
    910237 8wib:v (3.5) BS01 rna ? N/A A0QR10 38245551
    910238 8wib:w (3.5) BS01 rna ? GO:0022627 ... A0QZ86 38245551
    910239 8wic:1 (3.5) BS01 rna ? GO:0003735 ... A0QV03 38245551
    910240 8wic:2 (3.5) BS01 rna ? GO:0003735 ... A0QSD9 38245551
    910241 8wic:3 (3.5) BS01 rna ? GO:0003735 ... A0QSG7 38245551
    910242 8wic:3 (3.5) BS02 rna ? GO:0003735 ... A0QSG7 38245551
    910243 8wic:5 (3.5) BS01 rna ? GO:0003735 ... A0R3I9 38245551
    910244 8wic:6 (3.5) BS01 rna ? GO:0003735 ... A0QS39 38245551
    910245 8wic:7 (3.5) BS01 rna ? GO:0003735 ... A0R7K0 38245551
    910246 8wic:8 (3.5) BS01 rna ? GO:0003735 ... A0QYU7 38245551
    910247 8wic:E (3.5) BS01 rna ? GO:0002181 ... A0QSD4 38245551
    910248 8wic:F (3.5) BS01 rna ? GO:0003735 ... A0QSD1 38245551
    910249 8wic:G (3.5) BS01 rna ? GO:0003735 ... A0QSD2 38245551
    910250 8wic:H (3.5) BS01 rna ? GO:0000049 ... A0QSG1 38245551
    910251 8wic:H (3.5) BS02 rna ? GO:0000049 ... A0QSG1 38245551
    910252 8wic:I (3.5) BS01 rna ? GO:0002181 ... A0QSG4 38245551
    910253 8wic:J (3.5) BS01 rna ? GO:0003735 ... A0R7F6 38245551
    910254 8wic:M (3.5) BS01 rna ? GO:0003729 ... A0QSP8 38245551
    910255 8wic:N (3.5) BS01 rna ? GO:0003735 ... A0QSF9 38245551
    910256 8wic:O (3.5) BS01 rna ? GO:0003735 ... A0QSG8 38245551
    910257 8wic:Q (3.5) BS01 rna ? GO:0003735 ... A0QSL9 38245551
    910258 8wic:R (3.5) BS01 rna ? GO:0003735 ... A0QSG5 38245551
    910259 8wic:R (3.5) BS02 rna ? GO:0003735 ... A0QSG5 38245551
    910260 8wic:S (3.5) BS01 rna ? GO:0003735 ... A0QV42 38245551
    910261 8wic:T (3.5) BS01 rna ? GO:0000027 ... A0QYU6 38245551
    910262 8wic:U (3.5) BS01 rna ? GO:0003723 ... A0R151 38245551
    910263 8wic:V (3.5) BS01 rna ? GO:0003735 ... A0QSD6 38245551
    910264 8wic:W (3.5) BS01 rna ? GO:0003735 ... A0QSD3 38245551
    910265 8wic:X (3.5) BS01 rna ? GO:0003723 ... A0QSG0 38245551
    910266 8wic:Z (3.5) BS01 rna ? GO:0003735 ... A0R150 38245551
    910267 8wic:Z (3.5) BS02 rna ? GO:0003735 ... A0R150 38245551
    910268 8wid:d (3.5) BS01 rna ? GO:0003676 ... A0QSD7 38245551
    910269 8wid:e (3.5) BS01 rna ? GO:0003723 ... A0QSL7 38245551
    910270 8wid:f (3.5) BS01 rna ? GO:0003723 ... A0QSG6 38245551
    910271 8wid:g (3.5) BS01 rna ? GO:0003735 ... A0R7F9 38245551
    910272 8wid:h (3.5) BS01 rna ? GO:0000049 ... A0QS97 38245551
    910273 8wid:h (3.5) BS02 rna ? GO:0000049 ... A0QS97 38245551
    910274 8wid:i (3.5) BS01 rna ? GO:0003735 ... A0QSG3 38245551
    910275 8wid:j (3.5) BS01 rna ? GO:0003723 ... A0QSP9 38245551
    910276 8wid:k (3.5) BS01 rna ? GO:0000049 ... A0QSD0 38245551
    910277 8wid:l (3.5) BS01 rna ? GO:0003735 ... A0QSL6 38245551
    910278 8wid:l (3.5) BS02 rna ? GO:0003735 ... A0QSL6 38245551
    910279 8wid:m (3.5) BS01 rna ? GO:0000049 ... A0QS96 38245551
    910280 8wid:n (3.5) BS01 rna ? GO:0000049 ... A0QSL5 38245551
    910281 8wid:o (3.5) BS01 rna ? GO:0003735 ... A0R550 38245551
    910282 8wid:p (3.5) BS01 rna ? GO:0003735 ... A0QVQ3 38245551
    910283 8wid:q (3.5) BS01 rna ? GO:0003735 ... A0QV37 38245551
    910284 8wid:r (3.5) BS01 rna ? GO:0003735 ... A0QSE0 38245551
    910285 8wid:s (3.5) BS01 rna ? GO:0003735 ... A0R7F7 38245551
    910286 8wid:t (3.5) BS01 rna ? GO:0000028 ... A0QSD5 38245551
    910287 8wid:t (3.5) BS02 peptide ? GO:0000028 ... A0QSD5 38245551
    910288 8wid:u (3.5) BS01 rna ? GO:0003723 ... A0R102 38245551
    910289 8wid:v (3.5) BS01 rna ? N/A A0QR10 38245551
    910290 8wid:w (3.5) BS01 rna ? GO:0022627 ... A0QZ86 38245551
    910291 8wid:w (3.5) BS02 rna ? GO:0022627 ... A0QZ86 38245551
    910292 8wie:D (2.3) BS01 FE N/A GO:0004322 ... P02794 39366932
    910293 8wif:c (2.9) BS01 rna ? GO:0003735 ... A0QVB8 38245551
    910294 8wif:d (2.9) BS01 rna ? GO:0003676 ... A0QSD7 38245551
    910295 8wif:e (2.9) BS01 rna ? GO:0003723 ... A0QSL7 38245551
    910296 8wif:f (2.9) BS01 rna ? GO:0003723 ... A0QSG6 38245551
    910297 8wif:g (2.9) BS01 rna ? GO:0003735 ... A0R7F9 38245551
    910298 8wif:h (2.9) BS01 rna ? GO:0000049 ... A0QS97 38245551
    910299 8wif:i (2.9) BS01 rna ? GO:0003735 ... A0QSG3 38245551
    910300 8wif:j (2.9) BS01 rna ? GO:0003723 ... A0QSP9 38245551
    910301 8wif:k (2.9) BS01 rna ? GO:0000049 ... A0QSD0 38245551
    910302 8wif:l (2.9) BS01 rna ? GO:0003735 ... A0QSL6 38245551
    910303 8wif:m (2.9) BS01 rna ? GO:0000049 ... A0QS96 38245551
    910304 8wif:n (2.9) BS01 rna ? GO:0000049 ... A0QSL5 38245551
    910305 8wif:o (2.9) BS01 rna ? GO:0003735 ... A0R550 38245551
    910306 8wif:p (2.9) BS01 rna ? GO:0003735 ... A0QVQ3 38245551
    910307 8wif:q (2.9) BS01 rna ? GO:0003735 ... A0QV37 38245551
    910308 8wif:r (2.9) BS01 rna ? GO:0003735 ... A0QSE0 38245551
    910309 8wif:s (2.9) BS01 rna ? GO:0003735 ... A0R7F7 38245551
    910310 8wif:t (2.9) BS01 rna ? GO:0000028 ... A0QSD5 38245551
    910311 8wif:t (2.9) BS02 peptide ? GO:0000028 ... A0QSD5 38245551
    910312 8wif:u (2.9) BS01 rna ? GO:0003723 ... A0R102 38245551
    910313 8wif:v (2.9) BS01 rna ? N/A A0QR10 38245551
    910314 8wif:w (2.9) BS01 rna ? GO:0022627 ... A0QZ86 38245551
    910315 8wig:A (3.22) BS01 ZN N/A GO:0000166 ... P0A8M3 39014102
    910316 8wig:B (3.22) BS01 ZN N/A GO:0000166 ... P0A8M3 39014102
    910317 8wih:A (2.44) BS01 ATP N/A GO:0000166 ... P0A8M3 39014102
    910318 8wih:A (2.44) BS02 ZN N/A GO:0000166 ... P0A8M3 39014102
    910319 8wih:B (2.44) BS01 ATP N/A GO:0000166 ... P0A8M3 39014102
    910320 8wih:B (2.44) BS02 ZN N/A GO:0000166 ... P0A8M3 39014102
    910321 8wii:A (2.98) BS01 WE3 N/A GO:0000166 ... P0A8M3 39014102
    910322 8wii:A (2.98) BS02 ZN N/A GO:0000166 ... P0A8M3 39014102
    910323 8wii:B (2.98) BS01 WE3 N/A GO:0000166 ... P0A8M3 39014102
    910324 8wii:B (2.98) BS02 ZN N/A GO:0000166 ... P0A8M3 39014102
    910325 8wij:A (3.08) BS01 X5V N/A GO:0000166 ... P0A8M3 39014102
    910326 8wij:A (3.08) BS02 ZN N/A GO:0000166 ... P0A8M3 39014102
    910327 8wij:B (3.08) BS01 X5V N/A GO:0000166 ... P0A8M3 39014102
    910328 8wij:B (3.08) BS02 ZN N/A GO:0000166 ... P0A8M3 39014102
    910329 8wik:A (2.0) BS01 6FA 1.6.5.- GO:0003677 ... Q9BRQ8 38414669
    910330 8wik:A (2.0) BS02 NAD 1.6.5.- GO:0003677 ... Q9BRQ8 38414669
    910331 8wil:A (2.1) BS01 MG 3.6.4.13 GO:0001172 ... A0A7D0QVD8 38296832
    910332 8wim:A (1.84) BS01 MG 3.6.4.13 GO:0003968 ... A0A7D0QVD8 38296832
    910333 8wis:A (2.78) BS01 SIA N/A GO:0019031 ... A0A2P1GNQ1 N/A
    910334 8wis:A (2.78) BS02 BMA N/A GO:0019031 ... A0A2P1GNQ1 N/A
    910335 8wis:B (2.78) BS01 SIA N/A GO:0019031 ... A0A2P1GNQ1 N/A
    910336 8wis:B (2.78) BS02 BMA N/A GO:0019031 ... A0A2P1GNQ1 N/A
    910337 8wis:C (2.78) BS01 SIA N/A GO:0019031 ... A0A2P1GNQ1 N/A
    910338 8wis:C (2.78) BS02 BMA N/A GO:0019031 ... A0A2P1GNQ1 N/A
    910339 8wiu:A (1.4) BS01 WPR ? N/A O60885 38142510
    910340 8wiv:D (3.41) BS01 MG N/A N/A N/A N/A
    910341 8wiv:D (3.41) BS02 AGS N/A N/A N/A N/A
    910342 8wiv:L (3.41) BS01 AGS N/A N/A N/A N/A
    910343 8wiv:M (3.41) BS01 AGS N/A N/A N/A N/A
    910344 8wiv:M (3.41) BS02 MG N/A N/A N/A N/A
    910345 8wiv:O (3.41) BS01 AGS N/A N/A N/A N/A
    910346 8wiv:O (3.41) BS02 MG N/A N/A N/A N/A
    910347 8wiw:3 (5.6) BS01 peptide N/A GO:0003774 ... P0A1J9 39179739
    910348 8wiw:8 (5.6) BS01 peptide N/A GO:0003774 ... P0A1J9 39179739
    910349 8wiw:A4 (5.6) BS01 peptide N/A GO:0003774 ... P0A1J9 39179739
    910350 8wiw:AM (5.6) BS01 peptide N/A GO:0003774 ... P0A1J9 39179739
    910351 8wiw:AS (5.6) BS01 peptide N/A GO:0003774 ... P0A1J9 39179739
    910352 8wiw:AY (5.6) BS01 peptide N/A GO:0003774 ... P0A1J9 39179739
    910353 8wiw:Ae (5.6) BS01 peptide N/A GO:0003774 ... P0A1J9 39179739
    910354 8wiw:Ak (5.6) BS01 peptide N/A GO:0003774 ... P0A1J9 39179739
    910355 8wiw:Aq (5.6) BS01 peptide N/A GO:0003774 ... P0A1J9 39179739
    910356 8wiw:Aw (5.6) BS01 peptide N/A GO:0003774 ... P0A1J9 39179739
    910357 8wiw:B5 (5.6) BS01 peptide N/A GO:0003774 ... P0A1J9 39179739
    910358 8wiw:BA (5.6) BS01 peptide N/A GO:0003774 ... P0A1J9 39179739
    910359 8wiw:BH (5.6) BS01 peptide N/A GO:0003774 ... P0A1J9 39179739
    910360 8wiw:BO (5.6) BS01 peptide N/A GO:0003774 ... P0A1J9 39179739
    910361 8wiw:BV (5.6) BS01 peptide N/A GO:0003774 ... P0A1J9 39179739
    910362 8wiw:Bc (5.6) BS01 peptide N/A GO:0003774 ... P0A1J9 39179739
    910363 8wiw:Bj (5.6) BS01 peptide N/A GO:0003774 ... P0A1J9 39179739
    910364 8wiw:Bq (5.6) BS01 peptide N/A GO:0003774 ... P0A1J9 39179739
    910365 8wiw:Bx (5.6) BS01 peptide N/A GO:0003774 ... P0A1J9 39179739
    910366 8wiw:CB (5.6) BS01 peptide N/A GO:0003774 ... P0A1J9 39179739
    910367 8wiw:CI (5.6) BS01 peptide N/A GO:0003774 ... P0A1J9 39179739
    910368 8wiw:CP (5.6) BS01 peptide N/A GO:0003774 ... P0A1J9 39179739
    910369 8wiw:CW (5.6) BS01 peptide N/A GO:0003774 ... P0A1J9 39179739
    910370 8wiw:Cd (5.6) BS01 peptide N/A GO:0003774 ... P0A1J9 39179739
    910371 8wiw:Ck (5.6) BS01 peptide N/A GO:0003774 ... P0A1J9 39179739
    910372 8wiw:Cr (5.6) BS01 peptide N/A GO:0003774 ... P0A1J9 39179739
    910373 8wiw:Cy (5.6) BS01 peptide N/A GO:0003774 ... P0A1J9 39179739
    910374 8wiw:Z (5.6) BS01 peptide N/A GO:0003774 ... P0A1J9 39179739
    910375 8wiw:a (5.6) BS01 peptide N/A GO:0003774 ... P0A1J9 39179739
    910376 8wiw:b (5.6) BS01 peptide N/A GO:0003774 ... P0A1J9 39179739
    910377 8wiw:c (5.6) BS01 peptide N/A GO:0003774 ... P0A1J9 39179739
    910378 8wiw:d (5.6) BS01 peptide N/A GO:0003774 ... P0A1J9 39179739
    910379 8wiw:e (5.6) BS01 peptide N/A GO:0003774 ... P0A1J9 39179739
    910380 8wiw:f (5.6) BS01 peptide N/A GO:0003774 ... P0A1J9 39179739
    910381 8wix:A (2.29) BS01 HEM N/A GO:0004601 ... P01999 39090102
    910382 8wix:B (2.29) BS01 HEM N/A GO:0004601 ... P02130 39090102
    910383 8wiy:A (2.31) BS01 HEM N/A GO:0004601 ... P01999 39090102
    910384 8wiy:A (2.31) BS02 OXY N/A GO:0004601 ... P01999 39090102
    910385 8wiy:B (2.31) BS01 HEM N/A GO:0004601 ... P02130 39090102
    910386 8wiy:B (2.31) BS02 OXY N/A GO:0004601 ... P02130 39090102
    910387 8wiz:A (2.2) BS01 HEM N/A GO:0004601 ... P01999 39090102
    910388 8wiz:B (2.2) BS01 HEM N/A GO:0004601 ... P02130 39090102
    910389 8wiz:B (2.2) BS02 BCT N/A GO:0004601 ... P02130 39090102
    910390 8wj0:A (2.24) BS01 HEM N/A GO:0004601 ... P69905 39090102
    910391 8wj0:B (2.24) BS01 HEM N/A GO:0004601 ... P68871 39090102
    910392 8wj1:A (2.27) BS01 HEM N/A GO:0004601 ... P69905 39090102
    910393 8wj1:A (2.27) BS02 OXY N/A GO:0004601 ... P69905 39090102
    910394 8wj1:B (2.27) BS01 HEM N/A GO:0004601 ... P68871 39090102
    910395 8wj1:B (2.27) BS02 OXY N/A GO:0004601 ... P68871 39090102
    910396 8wj2:A (2.35) BS01 HEM N/A GO:0004601 ... P69905 39090102
    910397 8wj2:B (2.35) BS01 HEM N/A GO:0004601 ... P68871 39090102
    910398 8wj3:L (3.36) BS01 AGS N/A N/A N/A N/A
    910399 8wj3:M (3.36) BS01 AGS N/A N/A N/A N/A
    910400 8wj3:M (3.36) BS02 MG N/A N/A N/A N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).