SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    911601 8wmj:l (3.0) BS01 CLA N/A GO:0009765 ... N/A 38734819
    911602 8wmj:l (3.0) BS02 CLA N/A GO:0009765 ... N/A 38734819
    911603 8wmj:l (3.0) BS03 II0 N/A GO:0009765 ... N/A 38734819
    911604 8wmj:l (3.0) BS04 WVN N/A GO:0009765 ... N/A 38734819
    911605 8wmj:l (3.0) BS05 CLA N/A GO:0009765 ... N/A 38734819
    911606 8wmj:l (3.0) BS06 CLA N/A GO:0009765 ... N/A 38734819
    911607 8wmj:l (3.0) BS07 CLA N/A GO:0009765 ... N/A 38734819
    911608 8wmj:l (3.0) BS08 CLA N/A GO:0009765 ... N/A 38734819
    911609 8wmj:l (3.0) BS09 CLA N/A GO:0009765 ... N/A 38734819
    911610 8wmj:l (3.0) BS10 CLA N/A GO:0009765 ... N/A 38734819
    911611 8wmj:l (3.0) BS11 CLA N/A GO:0009765 ... N/A 38734819
    911612 8wmj:l (3.0) BS12 CLA N/A GO:0009765 ... N/A 38734819
    911613 8wmj:l (3.0) BS13 KC2 N/A GO:0009765 ... N/A 38734819
    911614 8wmj:l (3.0) BS14 CLA N/A GO:0009765 ... N/A 38734819
    911615 8wmj:l (3.0) BS15 II0 N/A GO:0009765 ... N/A 38734819
    911616 8wmj:l (3.0) BS16 II0 N/A GO:0009765 ... N/A 38734819
    911617 8wmj:l (3.0) BS17 WVN N/A GO:0009765 ... N/A 38734819
    911618 8wmj:l (3.0) BS18 II0 N/A GO:0009765 ... N/A 38734819
    911619 8wmj:m (3.0) BS01 CLA N/A GO:0009765 ... N/A 38734819
    911620 8wmj:m (3.0) BS02 CLA N/A GO:0009765 ... N/A 38734819
    911621 8wmj:m (3.0) BS03 CLA N/A GO:0009765 ... N/A 38734819
    911622 8wmj:m (3.0) BS04 CLA N/A GO:0009765 ... N/A 38734819
    911623 8wmj:m (3.0) BS05 CLA N/A GO:0009765 ... N/A 38734819
    911624 8wmj:m (3.0) BS06 CLA N/A GO:0009765 ... N/A 38734819
    911625 8wmj:m (3.0) BS07 CLA N/A GO:0009765 ... N/A 38734819
    911626 8wmj:m (3.0) BS08 CLA N/A GO:0009765 ... N/A 38734819
    911627 8wmj:m (3.0) BS09 CLA N/A GO:0009765 ... N/A 38734819
    911628 8wmj:m (3.0) BS10 CLA N/A GO:0009765 ... N/A 38734819
    911629 8wmj:m (3.0) BS11 CLA N/A GO:0009765 ... N/A 38734819
    911630 8wmj:m (3.0) BS12 KC2 N/A GO:0009765 ... N/A 38734819
    911631 8wmj:m (3.0) BS13 CLA N/A GO:0009765 ... N/A 38734819
    911632 8wmj:m (3.0) BS14 CLA N/A GO:0009765 ... N/A 38734819
    911633 8wmj:m (3.0) BS15 II0 N/A GO:0009765 ... N/A 38734819
    911634 8wmj:m (3.0) BS16 II0 N/A GO:0009765 ... N/A 38734819
    911635 8wmj:m (3.0) BS17 IHT N/A GO:0009765 ... N/A 38734819
    911636 8wmj:m (3.0) BS18 II0 N/A GO:0009765 ... N/A 38734819
    911637 8wmj:m (3.0) BS19 II0 N/A GO:0009765 ... N/A 38734819
    911638 8wmj:m (3.0) BS20 CLA N/A GO:0009765 ... N/A 38734819
    911639 8wmj:m (3.0) BS21 II0 N/A GO:0009765 ... N/A 38734819
    911640 8wmj:n (3.0) BS01 CLA N/A GO:0009765 ... N/A 38734819
    911641 8wmj:n (3.0) BS02 IHT N/A GO:0009765 ... N/A 38734819
    911642 8wmj:n (3.0) BS03 II0 N/A GO:0009765 ... N/A 38734819
    911643 8wmj:n (3.0) BS04 CLA N/A GO:0009765 ... N/A 38734819
    911644 8wmj:n (3.0) BS05 CLA N/A GO:0009765 ... N/A 38734819
    911645 8wmj:n (3.0) BS06 CLA N/A GO:0009765 ... N/A 38734819
    911646 8wmj:n (3.0) BS07 CLA N/A GO:0009765 ... N/A 38734819
    911647 8wmj:n (3.0) BS08 CLA N/A GO:0009765 ... N/A 38734819
    911648 8wmj:n (3.0) BS09 CLA N/A GO:0009765 ... N/A 38734819
    911649 8wmj:n (3.0) BS10 CLA N/A GO:0009765 ... N/A 38734819
    911650 8wmj:n (3.0) BS11 CLA N/A GO:0009765 ... N/A 38734819
    911651 8wmj:n (3.0) BS12 CLA N/A GO:0009765 ... N/A 38734819
    911652 8wmj:n (3.0) BS13 CLA N/A GO:0009765 ... N/A 38734819
    911653 8wmj:n (3.0) BS14 KC2 N/A GO:0009765 ... N/A 38734819
    911654 8wmj:n (3.0) BS15 KC2 N/A GO:0009765 ... N/A 38734819
    911655 8wmj:n (3.0) BS16 CLA N/A GO:0009765 ... N/A 38734819
    911656 8wmj:n (3.0) BS17 II0 N/A GO:0009765 ... N/A 38734819
    911657 8wmj:n (3.0) BS18 II0 N/A GO:0009765 ... N/A 38734819
    911658 8wmj:n (3.0) BS19 II0 N/A GO:0009765 ... N/A 38734819
    911659 8wmj:n (3.0) BS20 IHT N/A GO:0009765 ... N/A 38734819
    911660 8wmj:n (3.0) BS21 II0 N/A GO:0009765 ... N/A 38734819
    911661 8wmj:s (3.0) BS01 KC2 N/A N/A N/A 38734819
    911662 8wmj:s (3.0) BS02 CLA N/A N/A N/A 38734819
    911663 8wmj:s (3.0) BS03 CLA N/A N/A N/A 38734819
    911664 8wmj:s (3.0) BS04 KC2 N/A N/A N/A 38734819
    911665 8wmj:s (3.0) BS05 WVN N/A N/A N/A 38734819
    911666 8wmj:s (3.0) BS06 CLA N/A N/A N/A 38734819
    911667 8wmj:s (3.0) BS07 CLA N/A N/A N/A 38734819
    911668 8wmj:s (3.0) BS08 CLA N/A N/A N/A 38734819
    911669 8wmj:s (3.0) BS09 CLA N/A N/A N/A 38734819
    911670 8wmj:s (3.0) BS10 CLA N/A N/A N/A 38734819
    911671 8wmj:s (3.0) BS11 CLA N/A N/A N/A 38734819
    911672 8wmk:A (2.17) BS01 WU0 ? GO:0030246 ... P02866 N/A
    911673 8wmk:A (2.17) BS02 MAN ? GO:0030246 ... P02866 N/A
    911674 8wmk:A (2.17) BS03 MN ? GO:0030246 ... P02866 N/A
    911675 8wmk:A (2.17) BS04 CA ? GO:0030246 ... P02866 N/A
    911676 8wmk:B (2.17) BS01 MN ? GO:0030246 ... P02866 N/A
    911677 8wmk:B (2.17) BS02 CA ? GO:0030246 ... P02866 N/A
    911678 8wml:A (2.86) BS01 rna ? N/A A0A401FT36 38735995
    911679 8wml:A (2.86) BS02 ZN ? N/A A0A401FT36 38735995
    911680 8wml:A (2.86) BS03 ZN ? N/A A0A401FT36 38735995
    911681 8wmm:A (2.98) BS01 dna N/A GO:0003676 ... N/A 38811729
    911682 8wmm:A (2.98) BS02 rna N/A GO:0003676 ... N/A 38811729
    911683 8wmm:A (2.98) BS03 dna N/A GO:0003676 ... N/A 38811729
    911684 8wmm:B (2.98) BS01 dna N/A GO:0003676 ... N/A 38811729
    911685 8wmm:B (2.98) BS02 rna N/A GO:0003676 ... N/A 38811729
    911686 8wmm:B (2.98) BS03 dna N/A GO:0003676 ... N/A 38811729
    911687 8wmn:A (2.82) BS01 dna N/A GO:0003676 ... N/A 38811729
    911688 8wmn:A (2.82) BS02 dna N/A GO:0003676 ... N/A 38811729
    911689 8wmn:A (2.82) BS03 rna N/A GO:0003676 ... N/A 38811729
    911690 8wmn:B (2.82) BS01 dna N/A GO:0003676 ... N/A 38811729
    911691 8wmn:B (2.82) BS02 rna N/A GO:0003676 ... N/A 38811729
    911692 8wmn:B (2.82) BS03 dna N/A GO:0003676 ... N/A 38811729
    911693 8wmo:A (2.89) BS01 GTP N/A GO:0000226 ... Q2XVP4 N/A
    911694 8wmo:A (2.89) BS02 WIW N/A GO:0000226 ... Q2XVP4 N/A
    911695 8wmo:B (2.89) BS01 GDP N/A GO:0003924 ... A0A287AGU7 N/A
    911696 8wmo:B (2.89) BS02 WIW N/A GO:0003924 ... A0A287AGU7 N/A
    911697 8wmo:C (2.89) BS01 GTP N/A GO:0000226 ... Q2XVP4 N/A
    911698 8wmo:C (2.89) BS02 CA N/A GO:0000226 ... Q2XVP4 N/A
    911699 8wmo:D (2.89) BS01 GTP N/A GO:0003924 ... A0A287AGU7 N/A
    911700 8wmo:F (2.89) BS01 ACP N/A GO:0000226 ... A0A8C9FGJ1 N/A
    911701 8wmp:A (1.75) BS01 MN N/A GO:0000105 ... P9WML9 N/A
    911702 8wmp:A (1.75) BS02 MN N/A GO:0000105 ... P9WML9 N/A
    911703 8wmq:A (3.3) BS01 ZEA ? GO:0005345 ... Q9SRK7 38172575
    911704 8wmq:B (3.3) BS01 ZEA ? GO:0005345 ... Q9SRK7 38172575
    911705 8wms:A (2.4) BS01 peptide N/A N/A Q96T88 38898124
    911706 8wms:A (2.4) BS02 ZN N/A N/A Q96T88 38898124
    911707 8wms:A (2.4) BS03 ZN N/A N/A Q96T88 38898124
    911708 8wms:A (2.4) BS04 ZN N/A N/A Q96T88 38898124
    911709 8wms:A (2.4) BS05 ZN N/A N/A Q96T88 38898124
    911710 8wmu:A (2.7) BS01 GTP N/A GO:0000226 ... Q2XVP4 N/A
    911711 8wmu:A (2.7) BS02 CA N/A GO:0000226 ... Q2XVP4 N/A
    911712 8wmu:A (2.7) BS03 A1D55 N/A GO:0000226 ... Q2XVP4 N/A
    911713 8wmu:B (2.7) BS01 GDP N/A GO:0003924 ... A0A287AGU7 N/A
    911714 8wmu:B (2.7) BS02 A1D55 N/A GO:0003924 ... A0A287AGU7 N/A
    911715 8wmu:C (2.7) BS01 GTP N/A GO:0000226 ... Q2XVP4 N/A
    911716 8wmu:C (2.7) BS02 CA N/A GO:0000226 ... Q2XVP4 N/A
    911717 8wmu:D (2.7) BS01 GTP N/A GO:0003924 ... A0A287AGU7 N/A
    911718 8wmu:F (2.7) BS01 ACP N/A GO:0000226 ... A0A8C9FGJ1 N/A
    911719 8wmv:A (2.94) BS01 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    911720 8wmv:A (2.94) BS02 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    911721 8wmv:A (2.94) BS03 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    911722 8wmv:A (2.94) BS04 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    911723 8wmv:A (2.94) BS05 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    911724 8wmv:A (2.94) BS06 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    911725 8wmv:A (2.94) BS07 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    911726 8wmv:A (2.94) BS08 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    911727 8wmv:A (2.94) BS09 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    911728 8wmv:A (2.94) BS10 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    911729 8wmv:A (2.94) BS11 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    911730 8wmv:A (2.94) BS12 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    911731 8wmv:A (2.94) BS13 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    911732 8wmv:A (2.94) BS14 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    911733 8wmv:A (2.94) BS15 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    911734 8wmv:A (2.94) BS16 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    911735 8wmv:A (2.94) BS17 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    911736 8wmv:A (2.94) BS18 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    911737 8wmv:A (2.94) BS19 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    911738 8wmv:A (2.94) BS20 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    911739 8wmv:A (2.94) BS21 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    911740 8wmv:A (2.94) BS22 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    911741 8wmv:A (2.94) BS23 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    911742 8wmv:A (2.94) BS24 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    911743 8wmv:A (2.94) BS25 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    911744 8wmv:A (2.94) BS26 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    911745 8wmv:A (2.94) BS27 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    911746 8wmv:A (2.94) BS28 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    911747 8wmv:A (2.94) BS29 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    911748 8wmv:A (2.94) BS30 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    911749 8wmv:A (2.94) BS31 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    911750 8wmv:A (2.94) BS32 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    911751 8wmv:A (2.94) BS33 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    911752 8wmv:A (2.94) BS34 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    911753 8wmv:A (2.94) BS35 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    911754 8wmv:A (2.94) BS36 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    911755 8wmv:A (2.94) BS37 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    911756 8wmv:A (2.94) BS38 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    911757 8wmv:A (2.94) BS39 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    911758 8wmv:A (2.94) BS40 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    911759 8wmv:A (2.94) BS41 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    911760 8wmv:A (2.94) BS42 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    911761 8wmv:A (2.94) BS43 PQN 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    911762 8wmv:A (2.94) BS44 WVN 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    911763 8wmv:A (2.94) BS45 WVN 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    911764 8wmv:A (2.94) BS46 WVN 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    911765 8wmv:A (2.94) BS47 WVN 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    911766 8wmv:A (2.94) BS48 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    911767 8wmv:A (2.94) BS49 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    911768 8wmv:A (2.94) BS50 SF4 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    911769 8wmv:A (2.94) BS51 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    911770 8wmv:A (2.94) BS52 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    911771 8wmv:A (2.94) BS53 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    911772 8wmv:A (2.94) BS54 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    911773 8wmv:A (2.94) BS55 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    911774 8wmv:A (2.94) BS56 CLA 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    911775 8wmv:A (2.94) BS57 II0 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    911776 8wmv:A (2.94) BS58 WVN 1.97.1.12 GO:0000287 ... A6MVZ7 38734819
    911777 8wmv:B (2.94) BS01 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    911778 8wmv:B (2.94) BS02 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    911779 8wmv:B (2.94) BS03 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    911780 8wmv:B (2.94) BS04 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    911781 8wmv:B (2.94) BS05 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    911782 8wmv:B (2.94) BS06 SF4 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    911783 8wmv:B (2.94) BS07 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    911784 8wmv:B (2.94) BS08 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    911785 8wmv:B (2.94) BS09 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    911786 8wmv:B (2.94) BS10 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    911787 8wmv:B (2.94) BS11 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    911788 8wmv:B (2.94) BS12 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    911789 8wmv:B (2.94) BS13 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    911790 8wmv:B (2.94) BS14 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    911791 8wmv:B (2.94) BS15 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    911792 8wmv:B (2.94) BS16 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    911793 8wmv:B (2.94) BS17 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    911794 8wmv:B (2.94) BS18 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    911795 8wmv:B (2.94) BS19 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    911796 8wmv:B (2.94) BS20 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    911797 8wmv:B (2.94) BS21 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    911798 8wmv:B (2.94) BS22 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    911799 8wmv:B (2.94) BS23 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    911800 8wmv:B (2.94) BS24 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).