SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    912601 8wo5:EQ (7.4) BS01 peptide N/A GO:0003774 ... P0A1J9 39179739
    912602 8wo5:EQ (7.4) BS02 peptide N/A GO:0003774 ... P0A1J9 39179739
    912603 8wo5:EW (7.4) BS01 peptide N/A GO:0003774 ... P0A1J9 39179739
    912604 8wo5:EW (7.4) BS02 peptide N/A GO:0003774 ... P0A1J9 39179739
    912605 8wo5:Ea (7.4) BS01 peptide N/A GO:0003774 ... P0A1J9 39179739
    912606 8wo5:Ea (7.4) BS02 peptide N/A GO:0003774 ... P0A1J9 39179739
    912607 8wo5:Eg (7.4) BS01 peptide N/A GO:0003774 ... P0A1J9 39179739
    912608 8wo5:Eg (7.4) BS02 peptide N/A GO:0003774 ... P0A1J9 39179739
    912609 8wo5:Em (7.4) BS01 peptide N/A GO:0003774 ... P0A1J9 39179739
    912610 8wo5:Em (7.4) BS02 peptide N/A GO:0003774 ... P0A1J9 39179739
    912611 8wo8:A (2.78) BS01 rna 3.1.26.- GO:0003723 ... Q8U4Q7 38302756
    912612 8wo9:A (1.55) BS01 peptide N/A N/A N/A N/A
    912613 8woe:A0 (4.3) BS01 peptide N/A GO:0009288 ... P16437 39179739
    912614 8woe:A0 (4.3) BS02 peptide N/A GO:0009288 ... P16437 39179739
    912615 8woe:A5 (4.3) BS01 peptide N/A GO:0003774 ... P26462 39179739
    912616 8woe:A6 (4.3) BS01 peptide N/A GO:0009288 ... P16437 39179739
    912617 8woe:A6 (4.3) BS02 peptide N/A GO:0009288 ... P16437 39179739
    912618 8woe:A7 (4.3) BS01 peptide N/A GO:0009288 ... P16437 39179739
    912619 8woe:A7 (4.3) BS02 peptide N/A GO:0009288 ... P16437 39179739
    912620 8woe:A8 (4.3) BS01 peptide N/A GO:0009288 ... P16437 39179739
    912621 8woe:A8 (4.3) BS02 peptide N/A GO:0009288 ... P16437 39179739
    912622 8woe:A9 (4.3) BS01 peptide N/A GO:0009288 ... P16437 39179739
    912623 8woe:A9 (4.3) BS02 peptide N/A GO:0009288 ... P16437 39179739
    912624 8woe:AA (4.3) BS01 peptide N/A GO:0009288 ... P16323 39179739
    912625 8woe:AA (4.3) BS02 peptide N/A GO:0009288 ... P16323 39179739
    912626 8woe:AB (4.3) BS01 peptide N/A GO:0009288 ... P16323 39179739
    912627 8woe:AB (4.3) BS02 peptide N/A GO:0009288 ... P16323 39179739
    912628 8woe:AC (4.3) BS01 peptide N/A GO:0009288 ... P16323 39179739
    912629 8woe:AC (4.3) BS02 peptide N/A GO:0009288 ... P16323 39179739
    912630 8woe:AD (4.3) BS01 peptide N/A GO:0009288 ... P16323 39179739
    912631 8woe:AD (4.3) BS02 peptide N/A GO:0009288 ... P16323 39179739
    912632 8woe:AE (4.3) BS01 peptide N/A GO:0009288 ... P16323 39179739
    912633 8woe:AE (4.3) BS02 peptide N/A GO:0009288 ... P16323 39179739
    912634 8woe:AI (4.3) BS01 peptide N/A GO:0009288 ... P0A1J3 39179739
    912635 8woe:AV (4.3) BS01 peptide N/A GO:0003774 ... P15928 39179739
    912636 8woe:Ao (4.3) BS01 peptide N/A GO:0003774 ... P15928 39179739
    912637 8woe:B5 (4.3) BS01 peptide N/A GO:0003774 ... P0A1J9 39179739
    912638 8woe:BA (4.3) BS01 peptide N/A GO:0009288 ... P0A1I7 39179739
    912639 8woe:BA (4.3) BS02 peptide N/A GO:0009288 ... P0A1I7 39179739
    912640 8woe:BB (4.3) BS01 peptide N/A GO:0009288 ... P0A1I7 39179739
    912641 8woe:BC (4.3) BS01 peptide N/A GO:0009288 ... P0A1I7 39179739
    912642 8woe:BD (4.3) BS01 peptide N/A GO:0009288 ... P0A1I7 39179739
    912643 8woe:BE (4.3) BS01 peptide N/A GO:0009288 ... P0A1I7 39179739
    912644 8woe:BF (4.3) BS01 peptide N/A GO:0009288 ... P0A1I7 39179739
    912645 8woe:BF (4.3) BS02 peptide N/A GO:0009288 ... P0A1I7 39179739
    912646 8woe:Bc (4.3) BS01 peptide N/A GO:0003774 ... P0A1J9 39179739
    912647 8woe:Bj (4.3) BS01 peptide N/A GO:0003774 ... P0A1J9 39179739
    912648 8woe:Bq (4.3) BS01 peptide N/A GO:0003774 ... P0A1J9 39179739
    912649 8woe:Bx (4.3) BS01 peptide N/A GO:0003774 ... P0A1J9 39179739
    912650 8woe:C6 (4.3) BS01 peptide N/A GO:0003774 ... P0A1J9 39179739
    912651 8woe:CB (4.3) BS01 peptide N/A GO:0003774 ... P0A1J9 39179739
    912652 8woe:CI (4.3) BS01 peptide N/A GO:0003774 ... P0A1J9 39179739
    912653 8woe:CP (4.3) BS01 peptide N/A GO:0003774 ... P0A1J9 39179739
    912654 8woe:CW (4.3) BS01 peptide N/A GO:0003774 ... P0A1J9 39179739
    912655 8woe:Cd (4.3) BS01 peptide N/A GO:0003774 ... P0A1J9 39179739
    912656 8woe:Ck (4.3) BS01 peptide N/A GO:0003774 ... P0A1J9 39179739
    912657 8woe:Cr (4.3) BS01 peptide N/A GO:0003774 ... P0A1J9 39179739
    912658 8woe:Cy (4.3) BS01 peptide N/A GO:0003774 ... P0A1J9 39179739
    912659 8woe:D3 (4.3) BS01 peptide N/A GO:0003774 ... P0A1J9 39179739
    912660 8woe:D9 (4.3) BS01 peptide N/A GO:0003774 ... P0A1J9 39179739
    912661 8woe:DA (4.3) BS01 peptide N/A GO:0003774 ... P0A1J9 39179739
    912662 8woe:DG (4.3) BS01 peptide N/A GO:0003774 ... P0A1J9 39179739
    912663 8woe:DY (4.3) BS01 peptide N/A GO:0003774 ... P0A1J9 39179739
    912664 8woe:De (4.3) BS01 peptide N/A GO:0003774 ... P0A1J9 39179739
    912665 8woe:Dk (4.3) BS01 peptide N/A GO:0003774 ... P0A1J9 39179739
    912666 8woe:Dq (4.3) BS01 peptide N/A GO:0003774 ... P0A1J9 39179739
    912667 8woe:Dw (4.3) BS01 peptide N/A GO:0003774 ... P0A1J9 39179739
    912668 8woe:E1 (4.3) BS01 peptide N/A GO:0003774 ... P0A1J9 39179739
    912669 8woe:E2 (4.3) BS01 peptide N/A GO:0003774 ... P0A1J9 39179739
    912670 8woe:E3 (4.3) BS01 peptide N/A GO:0003774 ... P0A1J9 39179739
    912671 8woe:E4 (4.3) BS01 peptide N/A GO:0003774 ... P0A1J9 39179739
    912672 8woe:EC (4.3) BS01 peptide N/A GO:0003774 ... P0A1J9 39179739
    912673 8woe:EJ (4.3) BS01 peptide N/A GO:0003774 ... P0A1J9 39179739
    912674 8woe:EQ (4.3) BS01 peptide N/A GO:0003774 ... P0A1J9 39179739
    912675 8woe:EX (4.3) BS01 peptide N/A GO:0003774 ... P0A1J9 39179739
    912676 8woe:Ex (4.3) BS01 peptide N/A GO:0003774 ... P0A1J9 39179739
    912677 8woe:Ey (4.3) BS01 peptide N/A GO:0003774 ... P0A1J9 39179739
    912678 8woe:Ez (4.3) BS01 peptide N/A GO:0003774 ... P0A1J9 39179739
    912679 8wom:A (3.5) BS01 BLD ? GO:0005515 ... Q9LJX0 38513023
    912680 8woo:A (3.9) BS01 ANP ? GO:0005515 ... Q9LJX0 38513023
    912681 8woo:A (3.9) BS02 ANP ? GO:0005515 ... Q9LJX0 38513023
    912682 8woo:A (3.9) BS03 BLD ? GO:0005515 ... Q9LJX0 38513023
    912683 8wop:A (2.35) BS01 UDP 5.1.3.2 GO:0003978 ... Q9T0A7 38678521
    912684 8wop:A (2.35) BS02 NAD 5.1.3.2 GO:0003978 ... Q9T0A7 38678521
    912685 8wop:B (2.35) BS01 UDP 5.1.3.2 GO:0003978 ... Q9T0A7 38678521
    912686 8wop:B (2.35) BS02 NAD 5.1.3.2 GO:0003978 ... Q9T0A7 38678521
    912687 8woq:A (2.85) BS01 ZN ? GO:0016020 ... Q9NXL6 38378654
    912688 8woq:A (2.85) BS02 CA ? GO:0016020 ... Q9NXL6 38378654
    912689 8woq:A (2.85) BS03 CLR ? GO:0016020 ... Q9NXL6 38378654
    912690 8woq:A (2.85) BS04 CLR ? GO:0016020 ... Q9NXL6 38378654
    912691 8woq:A (2.85) BS05 CLR ? GO:0016020 ... Q9NXL6 38378654
    912692 8woq:A (2.85) BS06 SPL ? GO:0016020 ... Q9NXL6 38378654
    912693 8woq:B (2.85) BS01 ZN ? GO:0016020 ... Q9NXL6 38378654
    912694 8woq:B (2.85) BS02 CA ? GO:0016020 ... Q9NXL6 38378654
    912695 8woq:B (2.85) BS03 CLR ? GO:0016020 ... Q9NXL6 38378654
    912696 8woq:B (2.85) BS04 SPL ? GO:0016020 ... Q9NXL6 38378654
    912697 8woq:B (2.85) BS05 CLR ? GO:0016020 ... Q9NXL6 38378654
    912698 8woq:B (2.85) BS06 CLR ? GO:0016020 ... Q9NXL6 38378654
    912699 8woq:B (2.85) BS07 CLR ? GO:0016020 ... Q9NXL6 38378654
    912700 8woq:B (2.85) BS08 CLR ? GO:0016020 ... Q9NXL6 38378654
    912701 8wor:A (2.66) BS01 ZN ? GO:0016020 ... Q9NXL6 38378654
    912702 8wor:A (2.66) BS02 CA ? GO:0016020 ... Q9NXL6 38378654
    912703 8wor:A (2.66) BS03 CLR ? GO:0016020 ... Q9NXL6 38378654
    912704 8wor:A (2.66) BS04 CLR ? GO:0016020 ... Q9NXL6 38378654
    912705 8wor:A (2.66) BS05 CLR ? GO:0016020 ... Q9NXL6 38378654
    912706 8wor:A (2.66) BS06 SPL ? GO:0016020 ... Q9NXL6 38378654
    912707 8wor:A (2.66) BS07 CLR ? GO:0016020 ... Q9NXL6 38378654
    912708 8wor:B (2.66) BS01 ZN ? GO:0016020 ... Q9NXL6 38378654
    912709 8wor:B (2.66) BS02 CA ? GO:0016020 ... Q9NXL6 38378654
    912710 8wor:B (2.66) BS03 SPL ? GO:0016020 ... Q9NXL6 38378654
    912711 8wor:B (2.66) BS04 CLR ? GO:0016020 ... Q9NXL6 38378654
    912712 8wor:B (2.66) BS05 CLR ? GO:0016020 ... Q9NXL6 38378654
    912713 8wor:B (2.66) BS06 CLR ? GO:0016020 ... Q9NXL6 38378654
    912714 8wor:B (2.66) BS07 CLR ? GO:0016020 ... Q9NXL6 38378654
    912715 8wos:A (3.37) BS01 CLR ? GO:0016020 ... Q9NXL6 38378654
    912716 8wos:A (3.37) BS02 CLR ? GO:0016020 ... Q9NXL6 38378654
    912717 8wos:A (3.37) BS03 CLR ? GO:0016020 ... Q9NXL6 38378654
    912718 8wos:A (3.37) BS04 ZN ? GO:0016020 ... Q9NXL6 38378654
    912719 8wos:B (3.37) BS01 CLR ? GO:0016020 ... Q9NXL6 38378654
    912720 8wos:B (3.37) BS02 CLR ? GO:0016020 ... Q9NXL6 38378654
    912721 8wos:B (3.37) BS03 CLR ? GO:0016020 ... Q9NXL6 38378654
    912722 8wos:B (3.37) BS04 ZN ? GO:0016020 ... Q9NXL6 38378654
    912723 8wot:A (3.18) BS01 CLR ? GO:0016020 ... Q9NXL6 38378654
    912724 8wot:A (3.18) BS02 CLR ? GO:0016020 ... Q9NXL6 38378654
    912725 8wot:A (3.18) BS03 CLR ? GO:0016020 ... Q9NXL6 38378654
    912726 8wot:A (3.18) BS04 ZN ? GO:0016020 ... Q9NXL6 38378654
    912727 8wot:B (3.18) BS01 CLR ? GO:0016020 ... Q9NXL6 38378654
    912728 8wot:B (3.18) BS02 CLR ? GO:0016020 ... Q9NXL6 38378654
    912729 8wot:B (3.18) BS03 CLR ? GO:0016020 ... Q9NXL6 38378654
    912730 8wot:B (3.18) BS04 ZN ? GO:0016020 ... Q9NXL6 38378654
    912731 8wov:A (2.25) BS01 UDP 5.1.3.2 GO:0003978 ... Q9T0A7 38678521
    912732 8wov:A (2.25) BS02 NAD 5.1.3.2 GO:0003978 ... Q9T0A7 38678521
    912733 8wov:B (2.25) BS01 NAD 5.1.3.2 GO:0003978 ... Q9T0A7 38678521
    912734 8wov:B (2.25) BS02 UDP 5.1.3.2 GO:0003978 ... Q9T0A7 38678521
    912735 8wow:A (2.6) BS01 UDP 5.1.3.2 GO:0003978 ... Q9T0A7 38678521
    912736 8wow:A (2.6) BS02 NAD 5.1.3.2 GO:0003978 ... Q9T0A7 38678521
    912737 8wow:B (2.6) BS01 UDP 5.1.3.2 GO:0003978 ... Q9T0A7 38678521
    912738 8wow:B (2.6) BS02 NAD 5.1.3.2 GO:0003978 ... Q9T0A7 38678521
    912739 8wox:A (2.75) BS01 ZN 3.4.-.-
    3.4.17.23
    GO:0006508 ... G1TEF4 38112468
    912740 8woy:A (3.14) BS01 ZN 3.4.-.-
    3.4.17.23
    GO:0006508 ... G1TEF4 38112468
    912741 8woz:A (3.25) BS01 ZN 3.4.-.-
    3.4.17.23
    GO:0006508 ... G1TEF4 38112468
    912742 8wp0:A (3.4) BS01 ATP ? GO:0005515 ... Q9LJX0 38513023
    912743 8wp0:A (3.4) BS02 ATP ? GO:0005515 ... Q9LJX0 38513023
    912744 8wp1:A (3.15) BS01 U9S N/A GO:0004930 ... Q9BXA5 38923454
    912745 8wp2:A (3.3) BS01 rna N/A GO:0003676 ... A0A316E3U6 N/A
    912746 8wp2:A (3.3) BS02 dna N/A GO:0003676 ... A0A316E3U6 N/A
    912747 8wp2:B (3.3) BS01 rna N/A GO:0007165 ... A0A316E683 N/A
    912748 8wp2:B (3.3) BS02 dna N/A GO:0007165 ... A0A316E683 N/A
    912749 8wp2:C (3.3) BS01 rna N/A GO:0003676 ... A0A316E3U6 N/A
    912750 8wp2:C (3.3) BS02 dna N/A GO:0003676 ... A0A316E3U6 N/A
    912751 8wp2:D (3.3) BS01 rna N/A GO:0007165 ... A0A316E683 N/A
    912752 8wp2:D (3.3) BS02 dna N/A GO:0007165 ... A0A316E683 N/A
    912753 8wp2:I (3.3) BS01 rna N/A GO:0003676 ... A0A316E3U6 N/A
    912754 8wp2:I (3.3) BS02 dna N/A GO:0003676 ... A0A316E3U6 N/A
    912755 8wp2:J (3.3) BS01 rna N/A GO:0007165 ... A0A316E683 N/A
    912756 8wp2:J (3.3) BS02 dna N/A GO:0007165 ... A0A316E683 N/A
    912757 8wp2:K (3.3) BS01 rna N/A GO:0003676 ... A0A316E3U6 N/A
    912758 8wp2:K (3.3) BS02 dna N/A GO:0003676 ... A0A316E3U6 N/A
    912759 8wp2:L (3.3) BS01 rna N/A GO:0007165 ... A0A316E683 N/A
    912760 8wp2:L (3.3) BS02 dna N/A GO:0007165 ... A0A316E683 N/A
    912761 8wp5:A (2.57006) BS01 UDP N/A GO:0008194 ... A0AAT8XUJ8 38816433
    912762 8wp8:A (2.89) BS01 ZN N/A GO:0006508 ... Q9BYF1 39013463
    912763 8wpc:A (1.797) BS01 CO N/A GO:0003868 ... P93836 N/A
    912764 8wpc:A (1.797) BS02 X2T N/A GO:0003868 ... P93836 N/A
    912765 8wpd:A (1.799) BS01 CO N/A GO:0003868 ... P93836 N/A
    912766 8wpd:A (1.799) BS02 X3C N/A GO:0003868 ... P93836 N/A
    912767 8wpe:A (2.7) BS01 dna 2.7.7.7 GO:0000166 ... A0A7H0DN44 37995690
    912768 8wpe:A (2.7) BS02 dna 2.7.7.7 GO:0000166 ... A0A7H0DN44 37995690
    912769 8wpe:A (2.7) BS03 D3T 2.7.7.7 GO:0000166 ... A0A7H0DN44 37995690
    912770 8wpe:A (2.7) BS04 MG 2.7.7.7 GO:0000166 ... A0A7H0DN44 37995690
    912771 8wpe:C (2.7) BS01 dna 3.2.2.27 GO:0003677 ... M1LL92 37995690
    912772 8wpe:E (2.7) BS01 dna ? GO:0019031 ... A0A7H0DN82 37995690
    912773 8wpf:A (3.0) BS01 dna 2.7.7.7 GO:0000166 ... A0A7H0DN44 37995690
    912774 8wpf:A (3.0) BS02 dna 2.7.7.7 GO:0000166 ... A0A7H0DN44 37995690
    912775 8wpf:A (3.0) BS03 D3T 2.7.7.7 GO:0000166 ... A0A7H0DN44 37995690
    912776 8wpf:A (3.0) BS04 MG 2.7.7.7 GO:0000166 ... A0A7H0DN44 37995690
    912777 8wpf:B (3.0) BS01 dna ? GO:0006260 ... A0A7H0DNC0 37995690
    912778 8wpf:C (3.0) BS01 dna 3.2.2.27 GO:0003677 ... M1LL92 37995690
    912779 8wpf:E (3.0) BS01 dna ? GO:0019031 ... A0A7H0DN82 37995690
    912780 8wpg:A (2.7) BS01 TRP ? GO:0004930 ... P41180 37919470
    912781 8wpg:A (2.7) BS02 CA ? GO:0004930 ... P41180 37919470
    912782 8wpg:A (2.7) BS03 YP4 ? GO:0004930 ... P41180 37919470
    912783 8wpg:B (2.7) BS01 TRP ? GO:0004930 ... P41180 37919470
    912784 8wpg:B (2.7) BS02 CA ? GO:0004930 ... P41180 37919470
    912785 8wpg:B (2.7) BS03 YP4 ? GO:0004930 ... P41180 37919470
    912786 8wph:A (2.8) BS01 NAD N/A GO:0016616 ... N/A 40195441
    912787 8wph:B (2.8) BS01 NAD N/A GO:0016616 ... N/A 40195441
    912788 8wpi:A (2.201) BS01 NAD N/A GO:0016616 ... N/A 40195441
    912789 8wpi:A (2.201) BS02 NAP N/A GO:0016616 ... N/A 40195441
    912790 8wpi:A (2.201) BS03 NAP N/A GO:0016616 ... N/A 40195441
    912791 8wpi:B (2.201) BS01 NAD N/A GO:0016616 ... N/A 40195441
    912792 8wpi:B (2.201) BS02 NAP N/A GO:0016616 ... N/A 40195441
    912793 8wpj:A (2.8) BS01 NAD N/A GO:0016616 ... N/A 40195441
    912794 8wpj:A (2.8) BS02 NAD N/A GO:0016616 ... N/A 40195441
    912795 8wpj:B (2.8) BS01 NAD N/A GO:0016616 ... N/A 40195441
    912796 8wpj:B (2.8) BS02 NAD N/A GO:0016616 ... N/A 40195441
    912797 8wpk:A (2.7) BS01 dna 2.7.7.7 GO:0000166 ... A0A7H0DN44 37995690
    912798 8wpk:A (2.7) BS02 dna 2.7.7.7 GO:0000166 ... A0A7H0DN44 37995690
    912799 8wpk:A (2.7) BS03 D3T 2.7.7.7 GO:0000166 ... A0A7H0DN44 37995690
    912800 8wpk:A (2.7) BS04 MG 2.7.7.7 GO:0000166 ... A0A7H0DN44 37995690

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).