SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    913401 8you:B (1.8) BS04 SE ? GO:0046872 ... A0A5C7ETD9 N/A
    913402 8yox:A (2.48) BS01 6FA N/A N/A Q9BRQ8 39160155
    913403 8yp0:A (1.88) BS01 GNP N/A N/A Q9ULC3 39615683
    913404 8yp3:A (2.12) BS01 UD1 N/A GO:0003977 ... A0A2H1VI03 39039661
    913405 8yp3:A (2.12) BS02 MG N/A GO:0003977 ... A0A2H1VI03 39039661
    913406 8yp3:B (2.12) BS01 UD1 N/A GO:0003977 ... A0A2H1VI03 39039661
    913407 8yp3:B (2.12) BS02 MG N/A GO:0003977 ... A0A2H1VI03 39039661
    913408 8yp3:C (2.12) BS01 UD1 N/A GO:0003977 ... A0A2H1VI03 39039661
    913409 8yp3:C (2.12) BS02 MG N/A GO:0003977 ... A0A2H1VI03 39039661
    913410 8yp3:D (2.12) BS01 UD1 N/A GO:0003977 ... A0A2H1VI03 39039661
    913411 8yp3:D (2.12) BS02 MG N/A GO:0003977 ... A0A2H1VI03 39039661
    913412 8yp4:A (2.35) BS01 WNT N/A N/A Q02750 39111728
    913413 8yp4:B (2.35) BS01 WNT N/A N/A Q02750 39111728
    913414 8yp5:A (2.5) BS01 1FM N/A N/A P45985 39111728
    913415 8ypb:A (2.45) BS01 BCL N/A N/A O82943 39858518
    913416 8ypb:A (2.45) BS02 BCL N/A N/A O82943 39858518
    913417 8ypb:A (2.45) BS03 CRT N/A N/A O82943 39858518
    913418 8ypb:B (2.45) BS01 BCL N/A N/A N/A 39858518
    913419 8ypb:B (2.45) BS02 BCL N/A N/A N/A 39858518
    913420 8ypb:B (2.45) BS03 CA N/A N/A N/A 39858518
    913421 8ypb:B (2.45) BS04 CRT N/A N/A N/A 39858518
    913422 8ypb:B (2.45) BS05 CRT N/A N/A N/A 39858518
    913423 8ypb:B (2.45) BS06 CRT N/A N/A N/A 39858518
    913424 8ypb:C (2.45) BS01 BCL N/A N/A O82943 39858518
    913425 8ypb:C (2.45) BS02 CRT N/A N/A O82943 39858518
    913426 8ypb:C (2.45) BS03 BCL N/A N/A O82943 39858518
    913427 8ypb:D (2.45) BS01 BCL N/A N/A N/A 39858518
    913428 8ypb:D (2.45) BS02 CRT N/A N/A N/A 39858518
    913429 8ypb:D (2.45) BS03 BCL N/A N/A N/A 39858518
    913430 8ypb:D (2.45) BS04 CA N/A N/A N/A 39858518
    913431 8ypb:D (2.45) BS05 CRT N/A N/A N/A 39858518
    913432 8ypb:D (2.45) BS06 CRT N/A N/A N/A 39858518
    913433 8ypb:E (2.45) BS01 BCL N/A N/A O82943 39858518
    913434 8ypb:E (2.45) BS02 CRT N/A N/A O82943 39858518
    913435 8ypb:E (2.45) BS03 BCL N/A N/A O82943 39858518
    913436 8ypb:F (2.45) BS01 BCL N/A N/A N/A 39858518
    913437 8ypb:F (2.45) BS02 BCL N/A N/A N/A 39858518
    913438 8ypb:F (2.45) BS03 CA N/A N/A N/A 39858518
    913439 8ypb:F (2.45) BS04 CRT N/A N/A N/A 39858518
    913440 8ypb:F (2.45) BS05 CRT N/A N/A N/A 39858518
    913441 8ypb:G (2.45) BS01 CRT N/A N/A N/A 39858518
    913442 8ypb:G (2.45) BS02 BCL N/A N/A N/A 39858518
    913443 8ypb:G (2.45) BS03 CRT N/A N/A N/A 39858518
    913444 8ypb:G (2.45) BS04 BCL N/A N/A N/A 39858518
    913445 8ypb:G (2.45) BS05 CA N/A N/A N/A 39858518
    913446 8ypb:G (2.45) BS06 CRT N/A N/A N/A 39858518
    913447 8ypb:H (2.45) BS01 CRT N/A N/A O82943 39858518
    913448 8ypb:H (2.45) BS02 BCL N/A N/A O82943 39858518
    913449 8ypb:H (2.45) BS03 BCL N/A N/A O82943 39858518
    913450 8ypb:I (2.45) BS01 CRT N/A N/A N/A 39858518
    913451 8ypb:I (2.45) BS02 CRT N/A N/A N/A 39858518
    913452 8ypb:I (2.45) BS03 BCL N/A N/A N/A 39858518
    913453 8ypb:I (2.45) BS04 BCL N/A N/A N/A 39858518
    913454 8ypb:I (2.45) BS05 CA N/A N/A N/A 39858518
    913455 8ypb:I (2.45) BS06 CRT N/A N/A N/A 39858518
    913456 8ypb:J (2.45) BS01 BCL N/A N/A O82943 39858518
    913457 8ypb:J (2.45) BS02 CRT N/A N/A O82943 39858518
    913458 8ypb:J (2.45) BS03 BCL N/A N/A O82943 39858518
    913459 8ypb:K (2.45) BS01 CRT N/A N/A N/A 39858518
    913460 8ypb:K (2.45) BS02 BCL N/A N/A N/A 39858518
    913461 8ypb:K (2.45) BS03 CRT N/A N/A N/A 39858518
    913462 8ypb:K (2.45) BS04 BCL N/A N/A N/A 39858518
    913463 8ypb:K (2.45) BS05 CA N/A N/A N/A 39858518
    913464 8ypb:K (2.45) BS06 CRT N/A N/A N/A 39858518
    913465 8ypb:L (2.45) BS01 BCL N/A N/A O82943 39858518
    913466 8ypb:L (2.45) BS02 CRT N/A N/A O82943 39858518
    913467 8ypb:L (2.45) BS03 BCL N/A N/A O82943 39858518
    913468 8ypb:M (2.45) BS01 CRT N/A N/A N/A 39858518
    913469 8ypb:M (2.45) BS02 BCL N/A N/A N/A 39858518
    913470 8ypb:M (2.45) BS03 CRT N/A N/A N/A 39858518
    913471 8ypb:M (2.45) BS04 CRT N/A N/A N/A 39858518
    913472 8ypb:M (2.45) BS05 BCL N/A N/A N/A 39858518
    913473 8ypb:M (2.45) BS06 CA N/A N/A N/A 39858518
    913474 8ypb:N (2.45) BS01 BCL N/A N/A O82943 39858518
    913475 8ypb:N (2.45) BS02 CRT N/A N/A O82943 39858518
    913476 8ypb:N (2.45) BS03 BCL N/A N/A O82943 39858518
    913477 8ypb:O (2.45) BS01 CRT N/A N/A N/A 39858518
    913478 8ypb:O (2.45) BS02 BCL N/A N/A N/A 39858518
    913479 8ypb:O (2.45) BS03 CRT N/A N/A N/A 39858518
    913480 8ypb:O (2.45) BS04 BCL N/A N/A N/A 39858518
    913481 8ypb:O (2.45) BS05 CA N/A N/A N/A 39858518
    913482 8ypb:O (2.45) BS06 CRT N/A N/A N/A 39858518
    913483 8ypb:P (2.45) BS01 BCL N/A N/A O82943 39858518
    913484 8ypb:P (2.45) BS02 CRT N/A N/A O82943 39858518
    913485 8ypb:P (2.45) BS03 BCL N/A N/A O82943 39858518
    913486 8ypb:Q (2.45) BS01 CRT N/A N/A N/A 39858518
    913487 8ypb:Q (2.45) BS02 BCL N/A N/A N/A 39858518
    913488 8ypb:Q (2.45) BS03 CRT N/A N/A N/A 39858518
    913489 8ypb:Q (2.45) BS04 BCL N/A N/A N/A 39858518
    913490 8ypb:Q (2.45) BS05 CA N/A N/A N/A 39858518
    913491 8ypb:Q (2.45) BS06 CRT N/A N/A N/A 39858518
    913492 8ypb:R (2.45) BS01 CRT N/A N/A O82943 39858518
    913493 8ypb:R (2.45) BS02 BCL N/A N/A O82943 39858518
    913494 8ypb:R (2.45) BS03 BCL N/A N/A O82943 39858518
    913495 8ypb:S (2.45) BS01 CRT N/A N/A N/A 39858518
    913496 8ypb:S (2.45) BS02 CRT N/A N/A N/A 39858518
    913497 8ypb:S (2.45) BS03 BCL N/A N/A N/A 39858518
    913498 8ypb:S (2.45) BS04 BCL N/A N/A N/A 39858518
    913499 8ypb:S (2.45) BS05 CA N/A N/A N/A 39858518
    913500 8ypb:S (2.45) BS06 CRT N/A N/A N/A 39858518
    913501 8ypb:T (2.45) BS01 CRT N/A N/A O82943 39858518
    913502 8ypb:T (2.45) BS02 BCL N/A N/A O82943 39858518
    913503 8ypb:T (2.45) BS03 BCL N/A N/A O82943 39858518
    913504 8ypb:U (2.45) BS01 CRT N/A N/A N/A 39858518
    913505 8ypb:U (2.45) BS02 CRT N/A N/A N/A 39858518
    913506 8ypb:U (2.45) BS03 BCL N/A N/A N/A 39858518
    913507 8ypb:U (2.45) BS04 BCL N/A N/A N/A 39858518
    913508 8ypb:U (2.45) BS05 CA N/A N/A N/A 39858518
    913509 8ypb:U (2.45) BS06 CRT N/A N/A N/A 39858518
    913510 8ypb:V (2.45) BS01 BCL N/A N/A O82943 39858518
    913511 8ypb:V (2.45) BS02 CRT N/A N/A O82943 39858518
    913512 8ypb:V (2.45) BS03 BCL N/A N/A O82943 39858518
    913513 8ypb:W (2.45) BS01 CRT N/A N/A N/A 39858518
    913514 8ypb:W (2.45) BS02 BCL N/A N/A N/A 39858518
    913515 8ypb:W (2.45) BS03 CRT N/A N/A N/A 39858518
    913516 8ypb:W (2.45) BS04 BCL N/A N/A N/A 39858518
    913517 8ypb:W (2.45) BS05 CA N/A N/A N/A 39858518
    913518 8ypb:W (2.45) BS06 CRT N/A N/A N/A 39858518
    913519 8ypb:X (2.45) BS01 CRT N/A N/A O82943 39858518
    913520 8ypb:X (2.45) BS02 BCL N/A N/A O82943 39858518
    913521 8ypb:X (2.45) BS03 BCL N/A N/A O82943 39858518
    913522 8ypb:Y (2.45) BS01 CRT N/A N/A N/A 39858518
    913523 8ypb:Y (2.45) BS02 CRT N/A N/A N/A 39858518
    913524 8ypb:Y (2.45) BS03 BCL N/A N/A N/A 39858518
    913525 8ypb:Y (2.45) BS04 BCL N/A N/A N/A 39858518
    913526 8ypb:Y (2.45) BS05 CA N/A N/A N/A 39858518
    913527 8ypb:Y (2.45) BS06 CRT N/A N/A N/A 39858518
    913528 8ypb:Z (2.45) BS01 BCL N/A N/A O82943 39858518
    913529 8ypb:Z (2.45) BS02 CRT N/A N/A O82943 39858518
    913530 8ypb:Z (2.45) BS03 BCL N/A N/A O82943 39858518
    913531 8ypb:a (2.45) BS01 CRT N/A N/A N/A 39858518
    913532 8ypb:a (2.45) BS02 BCL N/A N/A N/A 39858518
    913533 8ypb:a (2.45) BS03 CRT N/A N/A N/A 39858518
    913534 8ypb:a (2.45) BS04 CRT N/A N/A N/A 39858518
    913535 8ypb:a (2.45) BS05 BCL N/A N/A N/A 39858518
    913536 8ypb:a (2.45) BS06 CA N/A N/A N/A 39858518
    913537 8ypb:b (2.45) BS01 BCL N/A N/A O82943 39858518
    913538 8ypb:b (2.45) BS02 BCL N/A N/A O82943 39858518
    913539 8ypb:b (2.45) BS03 CRT N/A N/A O82943 39858518
    913540 8ypd:A (2.78) BS01 BCL N/A N/A O82943 39858518
    913541 8ypd:A (2.78) BS02 CRT N/A N/A O82943 39858518
    913542 8ypd:A (2.78) BS03 BCL N/A N/A O82943 39858518
    913543 8ypd:B (2.78) BS01 BCL N/A N/A N/A 39858518
    913544 8ypd:B (2.78) BS02 CRT N/A N/A N/A 39858518
    913545 8ypd:B (2.78) BS03 BCL N/A N/A N/A 39858518
    913546 8ypd:B (2.78) BS04 CRT N/A N/A N/A 39858518
    913547 8ypd:B (2.78) BS05 CRT N/A N/A N/A 39858518
    913548 8ypd:C (2.78) BS01 CRT N/A N/A O82943 39858518
    913549 8ypd:C (2.78) BS02 BCL N/A N/A O82943 39858518
    913550 8ypd:C (2.78) BS03 BCL N/A N/A O82943 39858518
    913551 8ypd:D (2.78) BS01 CRT N/A N/A N/A 39858518
    913552 8ypd:D (2.78) BS02 CRT N/A N/A N/A 39858518
    913553 8ypd:D (2.78) BS03 BCL N/A N/A N/A 39858518
    913554 8ypd:D (2.78) BS04 BCL N/A N/A N/A 39858518
    913555 8ypd:D (2.78) BS05 CRT N/A N/A N/A 39858518
    913556 8ypd:E (2.78) BS01 CRT N/A N/A O82943 39858518
    913557 8ypd:E (2.78) BS02 BCL N/A N/A O82943 39858518
    913558 8ypd:E (2.78) BS03 BCL N/A N/A O82943 39858518
    913559 8ypd:F (2.78) BS01 BCL N/A N/A N/A 39858518
    913560 8ypd:F (2.78) BS02 BCL N/A N/A N/A 39858518
    913561 8ypd:F (2.78) BS03 CRT N/A N/A N/A 39858518
    913562 8ypd:F (2.78) BS04 CRT N/A N/A N/A 39858518
    913563 8ypd:F (2.78) BS05 CRT N/A N/A N/A 39858518
    913564 8ypd:G (2.78) BS01 CRT N/A N/A N/A 39858518
    913565 8ypd:G (2.78) BS02 CRT N/A N/A N/A 39858518
    913566 8ypd:G (2.78) BS03 BCL N/A N/A N/A 39858518
    913567 8ypd:G (2.78) BS04 BCL N/A N/A N/A 39858518
    913568 8ypd:G (2.78) BS05 CRT N/A N/A N/A 39858518
    913569 8ypd:H (2.78) BS01 CRT N/A N/A O82943 39858518
    913570 8ypd:H (2.78) BS02 BCL N/A N/A O82943 39858518
    913571 8ypd:H (2.78) BS03 BCL N/A N/A O82943 39858518
    913572 8ypd:I (2.78) BS01 CRT N/A N/A N/A 39858518
    913573 8ypd:I (2.78) BS02 CRT N/A N/A N/A 39858518
    913574 8ypd:I (2.78) BS03 BCL N/A N/A N/A 39858518
    913575 8ypd:I (2.78) BS04 BCL N/A N/A N/A 39858518
    913576 8ypd:I (2.78) BS05 CRT N/A N/A N/A 39858518
    913577 8ypd:J (2.78) BS01 CRT N/A N/A O82943 39858518
    913578 8ypd:J (2.78) BS02 BCL N/A N/A O82943 39858518
    913579 8ypd:J (2.78) BS03 BCL N/A N/A O82943 39858518
    913580 8ypd:K (2.78) BS01 CRT N/A N/A N/A 39858518
    913581 8ypd:K (2.78) BS02 CRT N/A N/A N/A 39858518
    913582 8ypd:K (2.78) BS03 BCL N/A N/A N/A 39858518
    913583 8ypd:K (2.78) BS04 BCL N/A N/A N/A 39858518
    913584 8ypd:K (2.78) BS05 CRT N/A N/A N/A 39858518
    913585 8ypd:L (2.78) BS01 CRT N/A N/A O82943 39858518
    913586 8ypd:L (2.78) BS02 BCL N/A N/A O82943 39858518
    913587 8ypd:L (2.78) BS03 BCL N/A N/A O82943 39858518
    913588 8ypd:M (2.78) BS01 CRT N/A N/A N/A 39858518
    913589 8ypd:M (2.78) BS02 CRT N/A N/A N/A 39858518
    913590 8ypd:M (2.78) BS03 BCL N/A N/A N/A 39858518
    913591 8ypd:M (2.78) BS04 BCL N/A N/A N/A 39858518
    913592 8ypd:M (2.78) BS05 CRT N/A N/A N/A 39858518
    913593 8ypd:N (2.78) BS01 CRT N/A N/A O82943 39858518
    913594 8ypd:N (2.78) BS02 BCL N/A N/A O82943 39858518
    913595 8ypd:N (2.78) BS03 BCL N/A N/A O82943 39858518
    913596 8ypd:O (2.78) BS01 CRT N/A N/A N/A 39858518
    913597 8ypd:O (2.78) BS02 CRT N/A N/A N/A 39858518
    913598 8ypd:O (2.78) BS03 BCL N/A N/A N/A 39858518
    913599 8ypd:O (2.78) BS04 BCL N/A N/A N/A 39858518
    913600 8ypd:O (2.78) BS05 CRT N/A N/A N/A 39858518

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).